Query 000463
Match_columns 1479
No_of_seqs 728 out of 5531
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 09:39:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000463.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000463hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 2E-274 3E-279 2610.7 140.4 1220 253-1479 122-1350(1381)
2 PLN03130 ABC transporter C fam 100.0 1E-213 3E-218 2164.9 167.2 1410 35-1479 26-1449(1622)
3 PLN03232 ABC transporter C fam 100.0 9E-209 2E-213 2121.4 167.2 1403 37-1479 28-1446(1495)
4 TIGR00957 MRP_assoc_pro multi 100.0 2E-207 5E-212 2110.2 169.0 1403 36-1479 21-1496(1522)
5 TIGR01271 CFTR_protein cystic 100.0 4E-196 9E-201 1992.3 149.1 1218 253-1479 3-1428(1490)
6 PTZ00243 ABC transporter; Prov 100.0 2E-187 5E-192 1904.9 147.7 1226 251-1479 57-1521(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 5E-140 1E-144 1326.2 108.7 1066 385-1479 91-1201(1228)
8 PTZ00265 multidrug resistance 100.0 6E-130 1E-134 1328.4 137.1 1151 319-1477 51-1433(1466)
9 KOG0058 Peptide exporter, ABC 100.0 1E-85 2.2E-90 792.3 55.8 539 935-1479 135-679 (716)
10 COG2274 SunT ABC-type bacterio 100.0 1.5E-79 3.3E-84 772.7 63.4 539 935-1479 142-684 (709)
11 COG1132 MdlB ABC-type multidru 100.0 7.3E-75 1.6E-79 737.8 62.2 521 953-1479 18-540 (567)
12 PRK11174 cysteine/glutathione 100.0 1.1E-73 2.4E-78 731.0 64.4 537 936-1479 11-560 (588)
13 TIGR00958 3a01208 Conjugate Tr 100.0 1.7E-73 3.6E-78 739.5 63.6 535 937-1479 151-690 (711)
14 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 7.8E-73 1.7E-77 734.1 65.9 521 951-1479 138-661 (686)
15 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.1E-72 2.3E-77 736.1 64.6 540 935-1479 142-688 (710)
16 TIGR01193 bacteriocin_ABC ABC- 100.0 1.3E-72 2.7E-77 734.6 64.1 536 935-1479 144-685 (708)
17 PRK10790 putative multidrug tr 100.0 6.3E-72 1.4E-76 714.9 66.1 521 952-1479 26-551 (592)
18 TIGR03375 type_I_sec_LssB type 100.0 4.9E-72 1.1E-76 727.5 65.5 538 935-1479 135-676 (694)
19 TIGR02868 CydC thiol reductant 100.0 4.5E-72 9.7E-77 707.4 62.4 508 953-1463 17-529 (529)
20 PRK11176 lipid transporter ATP 100.0 8.3E-71 1.8E-75 704.1 64.6 482 993-1479 71-555 (582)
21 PRK11160 cysteine/glutathione 100.0 1.6E-70 3.5E-75 696.7 64.9 535 938-1479 7-550 (574)
22 TIGR02203 MsbA_lipidA lipid A 100.0 4.6E-70 1E-74 696.4 64.7 523 952-1479 17-544 (571)
23 TIGR02857 CydD thiol reductant 100.0 5.2E-70 1.1E-74 688.6 63.2 517 954-1475 8-529 (529)
24 TIGR01846 type_I_sec_HlyB type 100.0 9.3E-70 2E-74 705.6 65.5 539 934-1479 126-668 (694)
25 PRK11174 cysteine/glutathione 100.0 9.2E-69 2E-73 685.7 73.3 544 319-869 13-584 (588)
26 KOG0055 Multidrug/pheromone ex 100.0 2.2E-71 4.7E-76 702.6 45.5 489 986-1479 70-564 (1228)
27 COG4988 CydD ABC-type transpor 100.0 4.6E-69 9.9E-74 638.6 58.4 486 987-1479 40-531 (559)
28 PRK13657 cyclic beta-1,2-gluca 100.0 4.3E-68 9.4E-73 678.6 66.1 524 951-1479 21-546 (588)
29 COG4987 CydC ABC-type transpor 100.0 1.6E-68 3.5E-73 621.7 54.6 477 997-1479 68-549 (573)
30 TIGR02204 MsbA_rel ABC transpo 100.0 5.5E-68 1.2E-72 677.6 64.8 539 937-1479 8-551 (576)
31 KOG0056 Heavy metal exporter H 100.0 2.7E-70 5.8E-75 618.2 33.6 506 965-1479 231-749 (790)
32 TIGR01192 chvA glucan exporter 100.0 1.1E-66 2.3E-71 662.6 66.2 534 938-1479 10-546 (585)
33 PRK10789 putative multidrug tr 100.0 3.7E-67 8E-72 665.9 61.0 486 989-1479 38-526 (569)
34 KOG0058 Peptide exporter, ABC 100.0 2.8E-66 6E-71 624.3 63.5 546 321-870 140-705 (716)
35 KOG0057 Mitochondrial Fe/S clu 100.0 5.7E-67 1.2E-71 608.8 53.6 481 987-1479 74-562 (591)
36 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.3E-65 7.1E-70 665.7 73.1 541 320-866 146-709 (710)
37 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 7.6E-65 1.7E-69 659.3 74.4 542 317-867 125-683 (686)
38 COG2274 SunT ABC-type bacterio 100.0 2E-64 4.3E-69 635.8 72.4 546 317-868 143-707 (709)
39 TIGR00958 3a01208 Conjugate Tr 100.0 1.3E-64 2.8E-69 656.5 72.8 538 323-865 156-710 (711)
40 COG1123 ATPase components of v 100.0 3.6E-67 7.8E-72 626.3 41.9 446 643-1479 4-507 (539)
41 TIGR01842 type_I_sec_PrtD type 100.0 4.4E-65 9.6E-70 644.6 63.4 514 954-1479 11-530 (544)
42 TIGR03375 type_I_sec_LssB type 100.0 3.6E-64 7.8E-69 653.9 73.0 535 318-858 137-689 (694)
43 PRK10261 glutathione transport 100.0 1.7E-66 3.7E-71 663.3 44.3 468 643-1479 11-541 (623)
44 TIGR01194 cyc_pep_trnsptr cycl 100.0 3.3E-64 7.1E-69 636.6 62.2 512 955-1479 24-547 (555)
45 TIGR01193 bacteriocin_ABC ABC- 100.0 3.5E-63 7.6E-68 646.0 73.5 536 322-866 150-706 (708)
46 PRK11176 lipid transporter ATP 100.0 7.4E-63 1.6E-67 630.9 73.5 544 320-868 17-578 (582)
47 TIGR02203 MsbA_lipidA lipid A 100.0 8.1E-63 1.8E-67 629.7 73.5 543 320-867 6-566 (571)
48 PTZ00265 multidrug resistance 100.0 2.2E-64 4.7E-69 687.0 62.3 487 988-1478 98-655 (1466)
49 PRK15134 microcin C ABC transp 100.0 8.9E-66 1.9E-70 648.3 43.1 438 644-1479 5-503 (529)
50 COG5265 ATM1 ABC-type transpor 100.0 5.7E-66 1.2E-70 581.6 36.8 469 1007-1479 2-474 (497)
51 PRK09700 D-allose transporter 100.0 1.6E-65 3.4E-70 643.8 44.2 436 644-1479 5-486 (510)
52 TIGR00956 3a01205 Pleiotropic 100.0 3.2E-64 7E-69 685.3 60.2 239 1226-1478 717-979 (1394)
53 PRK13549 xylose transporter AT 100.0 1.6E-65 3.5E-70 642.6 43.8 436 644-1479 5-482 (506)
54 TIGR02204 MsbA_rel ABC transpo 100.0 6.1E-62 1.3E-66 622.0 73.4 547 319-867 9-573 (576)
55 PRK10790 putative multidrug tr 100.0 1.1E-61 2.4E-66 620.6 75.1 540 321-869 16-575 (592)
56 TIGR02633 xylG D-xylose ABC tr 100.0 1.3E-64 2.9E-69 634.3 43.4 436 645-1479 2-480 (500)
57 TIGR03269 met_CoM_red_A2 methy 100.0 1.4E-64 2.9E-69 636.8 43.4 433 645-1479 1-505 (520)
58 PRK10762 D-ribose transporter 100.0 1.5E-64 3.3E-69 633.1 42.6 429 644-1479 4-472 (501)
59 PRK15439 autoinducer 2 ABC tra 100.0 2.6E-64 5.5E-69 631.4 44.5 438 643-1479 10-480 (510)
60 TIGR01257 rim_protein retinal- 100.0 7.9E-62 1.7E-66 656.3 70.5 202 1266-1479 1936-2147(2272)
61 PRK10789 putative multidrug tr 100.0 3.8E-61 8.3E-66 610.9 71.0 528 338-869 5-550 (569)
62 PRK11160 cysteine/glutathione 100.0 6.4E-61 1.4E-65 609.0 72.6 539 322-867 10-572 (574)
63 TIGR01846 type_I_sec_HlyB type 100.0 8.6E-61 1.9E-65 621.7 75.4 544 319-867 130-690 (694)
64 PRK13657 cyclic beta-1,2-gluca 100.0 1.1E-60 2.5E-65 610.3 74.6 538 322-869 13-570 (588)
65 TIGR02868 CydC thiol reductant 100.0 4.1E-61 8.9E-66 607.6 68.4 504 322-829 7-529 (529)
66 PRK11288 araG L-arabinose tran 100.0 6.9E-64 1.5E-68 627.2 42.0 431 644-1479 4-473 (501)
67 PRK15064 ABC transporter ATP-b 100.0 4.4E-63 9.6E-68 624.0 49.3 469 645-1479 2-512 (530)
68 TIGR01842 type_I_sec_PrtD type 100.0 8E-61 1.7E-65 605.8 69.7 520 325-857 3-542 (544)
69 PRK10982 galactose/methyl gala 100.0 1.4E-63 3E-68 623.4 43.7 428 648-1479 2-468 (491)
70 PRK10938 putative molybdenum t 100.0 1.1E-63 2.3E-68 624.6 42.0 434 644-1479 3-480 (490)
71 COG4988 CydD ABC-type transpor 100.0 1.4E-59 3.1E-64 557.7 66.7 529 332-870 4-556 (559)
72 COG1132 MdlB ABC-type multidru 100.0 1.8E-59 3.9E-64 596.8 72.2 534 326-869 13-564 (567)
73 TIGR01192 chvA glucan exporter 100.0 3.8E-59 8.3E-64 593.4 74.8 538 322-868 13-569 (585)
74 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.1E-61 2.3E-66 613.4 51.0 467 643-1478 3-516 (552)
75 PRK11819 putative ABC transpor 100.0 2.2E-61 4.7E-66 610.4 52.6 466 643-1477 5-517 (556)
76 PRK10522 multidrug transporter 100.0 2.9E-60 6.2E-65 600.7 62.1 464 995-1479 56-526 (547)
77 TIGR02857 CydD thiol reductant 100.0 2.8E-59 6E-64 591.0 67.9 508 326-841 1-529 (529)
78 COG4172 ABC-type uncharacteriz 100.0 5E-61 1.1E-65 536.7 37.2 440 642-1479 4-504 (534)
79 PRK10636 putative ABC transpor 100.0 3.7E-60 8.1E-65 605.1 49.7 187 1267-1479 312-504 (638)
80 PLN03232 ABC transporter C fam 100.0 1.9E-58 4.2E-63 635.3 63.8 449 1012-1479 366-816 (1495)
81 PLN03130 ABC transporter C fam 100.0 2.3E-58 5E-63 633.7 61.9 448 1012-1479 366-816 (1622)
82 PRK11147 ABC transporter ATPas 100.0 6.6E-59 1.4E-63 595.5 50.6 188 1267-1479 319-515 (635)
83 TIGR00957 MRP_assoc_pro multi 100.0 1.2E-56 2.6E-61 618.4 72.8 472 393-868 1029-1519(1522)
84 PLN03140 ABC transporter G fam 100.0 1.1E-57 2.3E-62 618.0 60.1 203 1267-1479 867-1098(1470)
85 COG4618 ArpD ABC-type protease 100.0 1.4E-57 3.1E-62 524.7 48.0 471 995-1479 71-548 (580)
86 PLN03073 ABC transporter F fam 100.0 3.8E-58 8.3E-63 587.0 45.6 188 1266-1479 507-701 (718)
87 COG4987 CydC ABC-type transpor 100.0 6.1E-55 1.3E-59 508.4 62.0 475 377-866 73-570 (573)
88 KOG0057 Mitochondrial Fe/S clu 100.0 2.4E-55 5.1E-60 511.8 58.4 517 341-867 43-584 (591)
89 COG0488 Uup ATPase components 100.0 6.3E-57 1.4E-61 551.3 45.4 469 644-1477 3-511 (530)
90 TIGR00954 3a01203 Peroxysomal 100.0 1E-55 2.2E-60 566.3 56.9 511 950-1477 97-653 (659)
91 PTZ00243 ABC transporter; Prov 100.0 2.8E-54 6.1E-59 592.8 71.7 466 402-869 1031-1546(1560)
92 PRK13409 putative ATPase RIL; 100.0 4.5E-57 9.8E-62 568.2 38.6 184 1267-1477 340-529 (590)
93 TIGR01194 cyc_pep_trnsptr cycl 100.0 4.4E-54 9.6E-59 544.3 64.7 511 322-849 11-551 (555)
94 KOG0056 Heavy metal exporter H 100.0 8.1E-56 1.7E-60 500.9 42.2 525 336-869 223-774 (790)
95 COG1129 MglA ABC-type sugar tr 100.0 3.6E-56 7.7E-61 529.1 41.2 438 643-1479 7-478 (500)
96 TIGR01271 CFTR_protein cystic 100.0 3.5E-52 7.6E-57 572.3 72.0 472 394-870 950-1453(1490)
97 COG4618 ArpD ABC-type protease 100.0 1.5E-52 3.2E-57 483.3 55.4 527 317-857 12-560 (580)
98 PRK10522 multidrug transporter 100.0 3.2E-52 6.9E-57 527.4 64.2 501 318-849 3-530 (547)
99 COG3845 ABC-type uncharacteriz 100.0 2.5E-53 5.4E-58 492.5 36.8 441 643-1479 3-480 (501)
100 KOG0054 Multidrug resistance-a 100.0 1.8E-50 3.9E-55 525.3 59.6 497 965-1479 217-719 (1381)
101 TIGR00954 3a01203 Peroxysomal 100.0 4.8E-49 1E-53 504.8 60.0 504 329-843 97-653 (659)
102 cd03289 ABCC_CFTR2 The CFTR su 100.0 4.6E-50 9.9E-55 460.5 25.2 213 1266-1479 1-213 (275)
103 COG5265 ATM1 ABC-type transpor 100.0 1.7E-47 3.7E-52 432.2 39.6 459 403-866 16-495 (497)
104 PRK14257 phosphate ABC transpo 100.0 2.9E-47 6.2E-52 448.4 23.7 242 1231-1479 35-301 (329)
105 KOG0927 Predicted transporter 100.0 7.1E-46 1.5E-50 430.3 25.7 189 1267-1479 389-583 (614)
106 PRK14257 phosphate ABC transpo 100.0 1.3E-44 2.9E-49 425.7 24.2 264 577-858 22-314 (329)
107 COG1126 GlnQ ABC-type polar am 100.0 7.5E-44 1.6E-48 373.7 19.3 207 644-858 2-226 (240)
108 COG1135 AbcC ABC-type metal io 100.0 3.1E-43 6.8E-48 386.8 19.6 201 1268-1479 2-219 (339)
109 cd03244 ABCC_MRP_domain2 Domai 100.0 2.4E-42 5.2E-47 387.5 25.5 214 1266-1479 1-214 (221)
110 COG1126 GlnQ ABC-type polar am 100.0 7.3E-43 1.6E-47 366.2 19.4 200 1267-1479 2-213 (240)
111 cd03288 ABCC_SUR2 The SUR doma 100.0 6E-42 1.3E-46 392.6 26.1 216 1264-1479 16-231 (257)
112 KOG0062 ATPase component of AB 100.0 4.5E-41 9.8E-46 388.5 28.8 190 1264-1479 359-556 (582)
113 cd03252 ABCC_Hemolysin The ABC 100.0 3.4E-41 7.3E-46 382.3 24.7 212 1268-1479 1-213 (237)
114 COG1117 PstB ABC-type phosphat 100.0 9.3E-42 2E-46 355.6 16.5 205 1266-1479 6-225 (253)
115 KOG0065 Pleiotropic drug resis 100.0 2.5E-40 5.5E-45 419.0 32.0 189 1280-1478 802-1007(1391)
116 cd03369 ABCC_NFT1 Domain 2 of 100.0 8.9E-41 1.9E-45 370.8 24.1 200 1262-1479 1-200 (207)
117 cd03245 ABCC_bacteriocin_expor 100.0 1.9E-40 4.1E-45 371.9 25.0 214 1266-1479 1-215 (220)
118 COG1125 OpuBA ABC-type proline 100.0 2.8E-41 6E-46 360.1 16.6 208 644-859 1-227 (309)
119 COG1135 AbcC ABC-type metal io 100.0 4.4E-41 9.6E-46 369.9 18.4 207 644-858 1-232 (339)
120 cd03254 ABCC_Glucan_exporter_l 100.0 2.2E-40 4.8E-45 373.7 24.1 213 1266-1479 1-214 (229)
121 cd03251 ABCC_MsbA MsbA is an e 100.0 3.1E-40 6.7E-45 373.8 25.2 212 1268-1479 1-213 (234)
122 COG1116 TauB ABC-type nitrate/ 100.0 1.4E-40 3E-45 360.9 20.5 197 644-847 3-212 (248)
123 cd03248 ABCC_TAP TAP, the Tran 100.0 3.1E-40 6.8E-45 371.7 24.0 216 1264-1479 8-225 (226)
124 cd03250 ABCC_MRP_domain1 Domai 100.0 4.8E-40 1E-44 364.2 24.2 199 1268-1479 1-204 (204)
125 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.4E-40 5.2E-45 364.6 21.2 210 643-858 3-228 (254)
126 cd03289 ABCC_CFTR2 The CFTR su 100.0 6.1E-40 1.3E-44 376.8 25.4 224 644-870 2-238 (275)
127 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.9E-40 6.2E-45 364.0 21.1 196 1267-1478 4-215 (254)
128 COG1136 SalX ABC-type antimicr 100.0 7.2E-40 1.5E-44 356.2 23.2 201 1268-1479 2-219 (226)
129 cd03253 ABCC_ATM1_transporter 100.0 8.3E-40 1.8E-44 370.8 24.7 211 1268-1479 1-212 (236)
130 COG1125 OpuBA ABC-type proline 100.0 2.2E-40 4.7E-45 353.3 18.4 199 1268-1479 2-213 (309)
131 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 7.6E-40 1.6E-44 371.5 24.0 212 1268-1479 1-214 (238)
132 TIGR00960 3a0501s02 Type II (G 100.0 6.3E-40 1.4E-44 366.6 21.6 201 1268-1479 2-215 (216)
133 COG1120 FepC ABC-type cobalami 100.0 3.6E-40 7.7E-45 365.4 18.7 210 644-858 2-229 (258)
134 COG4178 ABC-type uncharacteriz 100.0 1.1E-36 2.4E-41 369.1 48.4 465 988-1477 87-588 (604)
135 COG3839 MalK ABC-type sugar tr 100.0 1.2E-39 2.5E-44 374.7 21.1 201 644-858 3-224 (338)
136 COG2884 FtsE Predicted ATPase 100.0 8.5E-40 1.9E-44 335.1 17.5 200 1268-1479 2-214 (223)
137 cd03260 ABC_PstB_phosphate_tra 100.0 1.7E-39 3.8E-44 365.8 21.8 201 1268-1479 1-217 (227)
138 COG1124 DppF ABC-type dipeptid 100.0 1.4E-39 3.1E-44 349.0 19.5 202 1267-1479 3-219 (252)
139 TIGR02314 ABC_MetN D-methionin 100.0 1.6E-39 3.5E-44 383.1 22.0 201 1268-1479 2-218 (343)
140 COG1120 FepC ABC-type cobalami 100.0 1.7E-39 3.8E-44 359.9 20.6 200 1267-1479 2-216 (258)
141 COG1118 CysA ABC-type sulfate/ 100.0 8.9E-40 1.9E-44 358.4 17.6 207 644-858 2-228 (345)
142 COG1116 TauB ABC-type nitrate/ 100.0 2E-39 4.4E-44 351.9 20.1 194 1267-1478 3-207 (248)
143 cd03290 ABCC_SUR1_N The SUR do 100.0 5.6E-39 1.2E-43 359.4 24.0 211 1268-1479 1-218 (218)
144 COG1136 SalX ABC-type antimicr 100.0 2.8E-39 6.1E-44 351.5 20.9 200 645-847 2-221 (226)
145 COG3842 PotA ABC-type spermidi 100.0 9.6E-40 2.1E-44 377.2 18.0 211 643-859 4-228 (352)
146 PRK13631 cbiO cobalt transport 100.0 3.5E-39 7.5E-44 378.9 22.5 206 1264-1479 18-253 (320)
147 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.3E-39 7.2E-44 361.3 21.1 201 1268-1479 1-217 (218)
148 COG1127 Ttg2A ABC-type transpo 100.0 5.4E-39 1.2E-43 342.3 20.9 212 642-860 6-238 (263)
149 cd03261 ABC_Org_Solvent_Resist 100.0 4.6E-39 1E-43 364.3 21.4 199 1268-1479 1-214 (235)
150 cd03225 ABC_cobalt_CbiO_domain 100.0 4E-39 8.6E-44 358.8 20.5 200 1269-1479 1-211 (211)
151 cd03291 ABCC_CFTR1 The CFTR su 100.0 4.3E-38 9.3E-43 362.8 29.1 214 641-859 36-249 (282)
152 TIGR02673 FtsE cell division A 100.0 4.8E-39 1E-43 359.0 20.5 200 1268-1479 2-214 (214)
153 COG3638 ABC-type phosphate/pho 100.0 3.6E-39 7.7E-44 342.8 18.2 210 643-856 2-236 (258)
154 COG1122 CbiO ABC-type cobalt t 100.0 5.3E-39 1.1E-43 357.0 20.4 201 1267-1479 3-216 (235)
155 cd03226 ABC_cobalt_CbiO_domain 100.0 6.8E-39 1.5E-43 355.2 21.2 196 1269-1479 1-203 (205)
156 COG1117 PstB ABC-type phosphat 100.0 2.6E-39 5.6E-44 337.3 16.2 205 643-858 6-238 (253)
157 cd03250 ABCC_MRP_domain1 Domai 100.0 1.7E-38 3.7E-43 351.8 23.4 201 645-845 1-204 (204)
158 cd03292 ABC_FtsE_transporter F 100.0 9E-39 2E-43 356.8 21.3 200 1268-1479 1-213 (214)
159 PRK14269 phosphate ABC transpo 100.0 1E-38 2.3E-43 363.7 22.1 204 1267-1479 2-218 (246)
160 cd03246 ABCC_Protease_Secretio 100.0 1.6E-38 3.4E-43 342.4 21.9 171 1268-1479 1-172 (173)
161 cd03252 ABCC_Hemolysin The ABC 100.0 3.6E-38 7.9E-43 357.5 25.8 218 645-864 1-232 (237)
162 cd03259 ABC_Carb_Solutes_like 100.0 9.2E-39 2E-43 356.4 20.2 197 1268-1479 1-208 (213)
163 PRK13650 cbiO cobalt transport 100.0 1.3E-38 2.8E-43 369.0 22.0 202 1267-1479 4-217 (279)
164 TIGR02211 LolD_lipo_ex lipopro 100.0 2E-38 4.3E-43 355.8 22.9 201 1268-1479 2-218 (221)
165 PRK13647 cbiO cobalt transport 100.0 1.3E-38 2.7E-43 368.1 21.8 201 1267-1479 4-215 (274)
166 cd03247 ABCC_cytochrome_bd The 100.0 1.3E-38 2.9E-43 344.8 20.2 173 1268-1479 1-173 (178)
167 COG3638 ABC-type phosphate/pho 100.0 1.1E-38 2.4E-43 339.0 18.7 201 1267-1479 3-225 (258)
168 PRK11629 lolD lipoprotein tran 100.0 1.9E-38 4.1E-43 358.7 21.8 202 1267-1479 5-222 (233)
169 COG4615 PvdE ABC-type sideroph 100.0 8.4E-36 1.8E-40 333.1 41.8 466 988-1479 49-525 (546)
170 cd03266 ABC_NatA_sodium_export 100.0 1.7E-38 3.8E-43 355.5 20.6 200 1268-1479 2-213 (218)
171 cd03263 ABC_subfamily_A The AB 100.0 1.9E-38 4E-43 355.8 20.8 200 1268-1479 1-209 (220)
172 PRK14250 phosphate ABC transpo 100.0 3.6E-38 7.7E-43 358.1 23.0 200 1267-1479 3-209 (241)
173 PRK13637 cbiO cobalt transport 100.0 2.3E-38 4.9E-43 368.2 21.6 202 1267-1479 2-222 (287)
174 cd03256 ABC_PhnC_transporter A 100.0 2.2E-38 4.9E-43 360.3 21.2 200 1268-1479 1-222 (241)
175 PRK10744 pstB phosphate transp 100.0 4.4E-38 9.5E-43 361.5 23.3 206 1265-1479 11-232 (260)
176 PRK13635 cbiO cobalt transport 100.0 3.2E-38 7E-43 365.4 22.2 202 1267-1479 5-217 (279)
177 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 8.9E-38 1.9E-42 354.6 25.0 213 645-858 1-227 (238)
178 cd03264 ABC_drug_resistance_li 100.0 3.4E-38 7.3E-43 351.3 21.0 197 1268-1479 1-206 (211)
179 cd03268 ABC_BcrA_bacitracin_re 100.0 3.4E-38 7.4E-43 350.5 20.8 197 1268-1479 1-203 (208)
180 COG3839 MalK ABC-type sugar tr 100.0 4.1E-38 8.9E-43 361.9 21.5 198 1267-1479 3-211 (338)
181 PRK14242 phosphate transporter 100.0 4.9E-38 1.1E-42 359.9 21.9 204 1267-1479 6-225 (253)
182 PRK11153 metN DL-methionine tr 100.0 3.8E-38 8.3E-43 374.2 21.7 201 1268-1479 2-218 (343)
183 COG1127 Ttg2A ABC-type transpo 100.0 5.3E-38 1.1E-42 334.7 20.3 202 1265-1479 6-223 (263)
184 TIGR02315 ABC_phnC phosphonate 100.0 5.2E-38 1.1E-42 357.6 21.6 200 1268-1479 2-223 (243)
185 COG1122 CbiO ABC-type cobalt t 100.0 7E-38 1.5E-42 348.0 21.9 209 644-858 3-229 (235)
186 PRK10908 cell division protein 100.0 1.1E-37 2.5E-42 349.8 23.8 200 1268-1479 2-214 (222)
187 PRK14259 phosphate ABC transpo 100.0 1.1E-37 2.3E-42 359.6 23.8 206 1263-1477 9-228 (269)
188 cd03235 ABC_Metallic_Cations A 100.0 4E-38 8.6E-43 351.3 19.5 192 1269-1478 1-208 (213)
189 cd03296 ABC_CysA_sulfate_impor 100.0 8.1E-38 1.7E-42 355.0 22.3 198 1267-1479 2-214 (239)
190 PRK14273 phosphate ABC transpo 100.0 5.7E-38 1.2E-42 359.5 21.1 204 1267-1479 7-226 (254)
191 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.3E-38 1.2E-42 352.0 20.4 196 1268-1479 1-211 (220)
192 cd03262 ABC_HisP_GlnQ_permease 100.0 5.9E-38 1.3E-42 350.0 20.6 199 1268-1479 1-212 (213)
193 cd03219 ABC_Mj1267_LivG_branch 100.0 5.7E-38 1.2E-42 355.7 20.4 199 1268-1479 1-220 (236)
194 cd03253 ABCC_ATM1_transporter 100.0 2.7E-37 5.8E-42 350.2 25.7 215 645-862 1-229 (236)
195 cd03291 ABCC_CFTR1 The CFTR su 100.0 2.9E-37 6.3E-42 355.9 26.2 198 1265-1479 37-235 (282)
196 cd03251 ABCC_MsbA MsbA is an e 100.0 2.6E-37 5.5E-42 350.0 25.2 214 645-860 1-228 (234)
197 cd03301 ABC_MalK_N The N-termi 100.0 6.5E-38 1.4E-42 349.6 20.0 197 1268-1479 1-208 (213)
198 PRK13646 cbiO cobalt transport 100.0 7.5E-38 1.6E-42 363.9 21.3 202 1267-1479 2-223 (286)
199 PRK10584 putative ABC transpor 100.0 1.2E-37 2.6E-42 351.2 22.4 202 1267-1479 6-223 (228)
200 cd03224 ABC_TM1139_LivF_branch 100.0 9.5E-38 2.1E-42 350.6 21.3 200 1268-1479 1-209 (222)
201 PRK13632 cbiO cobalt transport 100.0 1.4E-37 3E-42 359.2 23.3 202 1267-1479 7-219 (271)
202 PRK14235 phosphate transporter 100.0 1.2E-37 2.6E-42 358.9 22.7 207 1264-1479 16-239 (267)
203 cd03258 ABC_MetN_methionine_tr 100.0 7.7E-38 1.7E-42 353.9 20.7 201 1268-1479 2-218 (233)
204 cd03254 ABCC_Glucan_exporter_l 100.0 2.9E-37 6.4E-42 348.3 25.0 211 644-857 2-226 (229)
205 PRK13636 cbiO cobalt transport 100.0 1.1E-37 2.5E-42 361.8 22.1 201 1267-1479 5-219 (283)
206 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.4E-37 3E-42 346.4 21.9 195 1268-1479 1-206 (211)
207 TIGR00972 3a0107s01c2 phosphat 100.0 1.2E-37 2.6E-42 355.4 21.9 203 1268-1479 2-220 (247)
208 PRK11650 ugpC glycerol-3-phosp 100.0 1.3E-37 2.9E-42 369.9 23.1 199 1267-1479 3-212 (356)
209 COG3840 ThiQ ABC-type thiamine 100.0 7.3E-38 1.6E-42 317.8 17.6 198 645-858 2-220 (231)
210 PRK13643 cbiO cobalt transport 100.0 1.1E-37 2.4E-42 362.6 21.8 201 1268-1479 2-221 (288)
211 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1E-37 2.2E-42 354.8 20.9 200 1268-1479 1-213 (242)
212 PRK14267 phosphate ABC transpo 100.0 1E-37 2.3E-42 357.2 20.6 204 1267-1479 4-225 (253)
213 cd03265 ABC_DrrA DrrA is the A 100.0 1.6E-37 3.4E-42 348.2 21.7 198 1268-1479 1-209 (220)
214 PRK14247 phosphate ABC transpo 100.0 1.5E-37 3.2E-42 355.4 21.5 204 1267-1479 3-222 (250)
215 PRK11247 ssuB aliphatic sulfon 100.0 2.4E-37 5.2E-42 353.1 23.1 195 1267-1479 12-211 (257)
216 cd03288 ABCC_SUR2 The SUR doma 100.0 7E-37 1.5E-41 350.7 27.0 215 642-858 17-244 (257)
217 cd03228 ABCC_MRP_Like The MRP 100.0 2.2E-37 4.7E-42 333.0 21.1 171 1268-1479 1-171 (171)
218 COG3840 ThiQ ABC-type thiamine 100.0 1E-37 2.3E-42 316.7 17.4 195 1268-1479 2-207 (231)
219 PRK13652 cbiO cobalt transport 100.0 2.1E-37 4.7E-42 358.6 22.6 200 1268-1479 4-215 (277)
220 PRK14237 phosphate transporter 100.0 2.7E-37 5.8E-42 356.0 23.1 205 1266-1479 19-239 (267)
221 PRK11432 fbpC ferric transport 100.0 1.8E-37 4E-42 367.7 22.2 199 1266-1479 5-214 (351)
222 PRK13640 cbiO cobalt transport 100.0 3.3E-37 7.1E-42 357.8 23.6 203 1266-1479 4-220 (282)
223 PRK11650 ugpC glycerol-3-phosp 100.0 3E-37 6.5E-42 366.9 23.8 206 644-858 3-225 (356)
224 PRK10575 iron-hydroxamate tran 100.0 2.2E-37 4.7E-42 356.6 21.9 200 1267-1479 11-225 (265)
225 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.9E-37 4.1E-42 351.2 21.1 198 1268-1479 2-209 (236)
226 PRK14251 phosphate ABC transpo 100.0 1.6E-37 3.5E-42 355.3 20.4 204 1267-1479 4-223 (251)
227 cd03257 ABC_NikE_OppD_transpor 100.0 3.7E-37 7.9E-42 347.3 23.0 201 1268-1479 2-223 (228)
228 TIGR03411 urea_trans_UrtD urea 100.0 2.6E-37 5.7E-42 351.6 21.8 199 1268-1479 3-219 (242)
229 PRK13644 cbiO cobalt transport 100.0 3.1E-37 6.8E-42 356.4 22.7 200 1268-1479 2-212 (274)
230 PRK11231 fecE iron-dicitrate t 100.0 2.7E-37 6E-42 354.0 21.7 199 1268-1479 3-215 (255)
231 PRK09536 btuD corrinoid ABC tr 100.0 2.8E-37 6E-42 370.1 22.7 200 1267-1479 3-216 (402)
232 PRK13537 nodulation ABC transp 100.0 2E-37 4.3E-42 362.8 20.9 200 1266-1479 6-215 (306)
233 TIGR02314 ABC_MetN D-methionin 100.0 3.8E-37 8.1E-42 363.0 23.4 207 645-858 2-231 (343)
234 PRK14245 phosphate ABC transpo 100.0 2.2E-37 4.8E-42 353.8 20.8 204 1267-1479 3-222 (250)
235 cd03218 ABC_YhbG The ABC trans 100.0 2.2E-37 4.7E-42 350.0 20.6 199 1268-1479 1-210 (232)
236 PRK13634 cbiO cobalt transport 100.0 2.6E-37 5.5E-42 359.9 21.7 203 1267-1479 2-223 (290)
237 PRK10247 putative ABC transpor 100.0 4.4E-37 9.6E-42 345.5 22.8 198 1267-1476 7-211 (225)
238 cd03229 ABC_Class3 This class 100.0 3.5E-37 7.6E-42 333.5 21.2 172 1268-1479 1-178 (178)
239 PRK13651 cobalt transporter AT 100.0 3E-37 6.5E-42 360.5 22.2 202 1267-1479 2-242 (305)
240 PRK13642 cbiO cobalt transport 100.0 4E-37 8.8E-42 356.3 23.1 202 1267-1479 4-217 (277)
241 PRK14240 phosphate transporter 100.0 4E-37 8.7E-42 351.8 22.6 205 1266-1479 2-222 (250)
242 cd03269 ABC_putative_ATPase Th 100.0 1.8E-37 3.8E-42 345.3 19.1 195 1268-1479 1-205 (210)
243 PRK14249 phosphate ABC transpo 100.0 4.2E-37 9.1E-42 351.7 22.6 204 1267-1479 4-223 (251)
244 PRK14244 phosphate ABC transpo 100.0 1.6E-37 3.6E-42 355.1 19.1 204 1267-1479 5-225 (251)
245 cd03244 ABCC_MRP_domain2 Domai 100.0 8.9E-37 1.9E-41 342.5 24.6 206 644-851 2-220 (221)
246 PRK14239 phosphate transporter 100.0 4E-37 8.7E-42 352.3 22.0 204 1267-1479 5-224 (252)
247 PRK10619 histidine/lysine/argi 100.0 3.8E-37 8.3E-42 353.2 21.8 203 1265-1479 3-229 (257)
248 PRK14248 phosphate ABC transpo 100.0 4.3E-37 9.3E-42 354.9 22.2 204 1267-1479 21-240 (268)
249 TIGR02982 heterocyst_DevA ABC 100.0 2.6E-37 5.7E-42 346.3 19.8 201 1268-1479 2-218 (220)
250 TIGR03265 PhnT2 putative 2-ami 100.0 2.9E-37 6.3E-42 366.6 21.3 198 1267-1479 4-212 (353)
251 PRK14256 phosphate ABC transpo 100.0 4.9E-37 1.1E-41 351.4 22.4 206 1265-1479 2-224 (252)
252 PRK14262 phosphate ABC transpo 100.0 3.7E-37 8.1E-42 352.0 21.4 204 1267-1479 3-222 (250)
253 cd03230 ABC_DR_subfamily_A Thi 100.0 4.9E-37 1.1E-41 330.8 21.0 169 1268-1479 1-172 (173)
254 PRK14236 phosphate transporter 100.0 5.3E-37 1.2E-41 354.5 22.8 206 1265-1479 23-244 (272)
255 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.9E-37 4.1E-42 357.6 18.9 198 1269-1479 26-238 (269)
256 PRK13648 cbiO cobalt transport 100.0 3.7E-37 8E-42 355.5 21.3 202 1267-1479 7-219 (269)
257 PRK13633 cobalt transporter AT 100.0 5.1E-37 1.1E-41 356.0 22.6 202 1267-1479 4-221 (280)
258 TIGR01186 proV glycine betaine 100.0 1.9E-37 4.2E-42 367.2 19.3 187 1282-1479 6-207 (363)
259 PRK10851 sulfate/thiosulfate t 100.0 5E-37 1.1E-41 364.6 22.9 198 1267-1479 2-214 (353)
260 PRK14268 phosphate ABC transpo 100.0 3.4E-37 7.4E-42 353.7 20.6 204 1267-1479 12-230 (258)
261 TIGR03005 ectoine_ehuA ectoine 100.0 4E-37 8.6E-42 352.1 21.1 199 1268-1479 1-224 (252)
262 TIGR01277 thiQ thiamine ABC tr 100.0 5.2E-37 1.1E-41 342.2 21.4 195 1268-1479 1-206 (213)
263 PRK11124 artP arginine transpo 100.0 4.9E-37 1.1E-41 349.3 21.4 200 1267-1479 2-218 (242)
264 COG1124 DppF ABC-type dipeptid 100.0 3.7E-37 7.9E-42 330.5 19.1 210 644-858 3-232 (252)
265 PRK14274 phosphate ABC transpo 100.0 6.5E-37 1.4E-41 351.7 22.5 204 1267-1479 12-231 (259)
266 PRK14266 phosphate ABC transpo 100.0 5E-37 1.1E-41 351.0 21.4 204 1267-1479 3-222 (250)
267 PRK09493 glnQ glutamine ABC tr 100.0 5.3E-37 1.2E-41 348.6 21.4 199 1268-1479 2-213 (240)
268 PRK14254 phosphate ABC transpo 100.0 8.8E-37 1.9E-41 354.3 23.5 206 1265-1479 37-257 (285)
269 PRK14252 phosphate ABC transpo 100.0 6.1E-37 1.3E-41 353.0 21.8 209 1262-1479 11-237 (265)
270 PRK13631 cbiO cobalt transport 100.0 1.2E-36 2.6E-41 357.4 24.6 213 642-858 19-266 (320)
271 PRK14270 phosphate ABC transpo 100.0 7.6E-37 1.6E-41 349.6 22.4 204 1267-1479 4-223 (251)
272 PRK14238 phosphate transporter 100.0 9.3E-37 2E-41 352.1 23.3 206 1265-1479 22-243 (271)
273 cd03245 ABCC_bacteriocin_expor 100.0 1.7E-36 3.6E-41 340.0 24.5 205 644-850 2-220 (220)
274 TIGR01186 proV glycine betaine 100.0 3.4E-37 7.3E-42 365.2 19.8 192 659-858 5-220 (363)
275 PRK10253 iron-enterobactin tra 100.0 6.2E-37 1.3E-41 352.8 21.4 201 1266-1479 6-221 (265)
276 PRK11000 maltose/maltodextrin 100.0 5.7E-37 1.2E-41 367.0 21.8 198 1267-1479 3-211 (369)
277 COG2884 FtsE Predicted ATPase 100.0 4.1E-37 8.9E-42 315.5 17.5 193 645-850 2-219 (223)
278 PRK13649 cbiO cobalt transport 100.0 6.9E-37 1.5E-41 355.4 21.8 202 1268-1479 3-222 (280)
279 TIGR03410 urea_trans_UrtE urea 100.0 8E-37 1.7E-41 344.9 21.6 200 1268-1479 1-209 (230)
280 cd03261 ABC_Org_Solvent_Resist 100.0 7.8E-37 1.7E-41 346.1 21.6 203 645-857 1-226 (235)
281 PRK11432 fbpC ferric transport 100.0 1.1E-36 2.4E-41 360.9 23.8 206 643-858 5-227 (351)
282 TIGR03258 PhnT 2-aminoethylpho 100.0 5.8E-37 1.2E-41 364.5 21.3 200 1265-1479 3-216 (362)
283 PRK13645 cbiO cobalt transport 100.0 6.8E-37 1.5E-41 356.8 21.5 204 1265-1479 4-228 (289)
284 PRK13548 hmuV hemin importer A 100.0 1.4E-36 3E-41 348.4 23.6 199 1268-1479 3-218 (258)
285 PRK11831 putative ABC transpor 100.0 1.1E-36 2.3E-41 351.5 22.7 200 1267-1479 7-221 (269)
286 PRK14260 phosphate ABC transpo 100.0 7.9E-37 1.7E-41 350.9 21.4 202 1266-1476 6-223 (259)
287 cd03300 ABC_PotA_N PotA is an 100.0 4.8E-37 1E-41 346.9 19.2 197 1268-1479 1-208 (232)
288 PRK15079 oligopeptide ABC tran 100.0 9.2E-37 2E-41 359.7 22.3 202 1267-1479 8-239 (331)
289 PRK13637 cbiO cobalt transport 100.0 1.6E-36 3.5E-41 352.7 24.0 209 644-857 2-234 (287)
290 PRK13641 cbiO cobalt transport 100.0 1.2E-36 2.6E-41 353.9 22.7 202 1267-1479 2-222 (287)
291 PRK11614 livF leucine/isoleuci 100.0 1.1E-36 2.5E-41 345.2 21.9 200 1267-1479 5-214 (237)
292 PRK11264 putative amino-acid A 100.0 9.9E-37 2.2E-41 348.6 21.6 200 1267-1479 3-221 (250)
293 TIGR03522 GldA_ABC_ATP gliding 100.0 8.2E-37 1.8E-41 357.5 21.2 198 1268-1479 3-209 (301)
294 TIGR01288 nodI ATP-binding ABC 100.0 8.4E-37 1.8E-41 358.0 21.3 199 1267-1479 4-212 (303)
295 PRK14261 phosphate ABC transpo 100.0 1.1E-36 2.3E-41 348.8 21.6 204 1267-1479 6-225 (253)
296 PRK09452 potA putrescine/sperm 100.0 1.3E-36 2.8E-41 362.7 23.0 199 1266-1479 13-222 (375)
297 PRK10895 lipopolysaccharide AB 100.0 1.7E-36 3.6E-41 344.7 22.8 200 1267-1479 3-214 (241)
298 PRK11308 dppF dipeptide transp 100.0 1.4E-36 3.1E-41 357.8 22.7 203 1267-1479 5-232 (327)
299 PRK14243 phosphate transporter 100.0 1.7E-36 3.7E-41 348.8 22.8 201 1267-1476 10-224 (264)
300 TIGR03873 F420-0_ABC_ATP propo 100.0 1.4E-36 3E-41 348.4 21.9 199 1268-1479 2-214 (256)
301 TIGR02769 nickel_nikE nickel i 100.0 1.5E-36 3.1E-41 349.7 22.2 202 1268-1479 3-228 (265)
302 PRK13634 cbiO cobalt transport 100.0 1.5E-36 3.3E-41 353.4 22.5 207 645-857 3-235 (290)
303 PRK14271 phosphate ABC transpo 100.0 1.9E-36 4.1E-41 350.1 23.1 204 1267-1479 21-239 (276)
304 PRK14253 phosphate ABC transpo 100.0 1.5E-36 3.3E-41 346.8 22.1 204 1267-1479 3-221 (249)
305 TIGR03265 PhnT2 putative 2-ami 100.0 1.3E-36 2.9E-41 361.0 22.3 205 644-858 4-225 (353)
306 PRK13650 cbiO cobalt transport 100.0 2.5E-36 5.4E-41 349.9 23.6 208 644-858 4-230 (279)
307 PRK11300 livG leucine/isoleuci 100.0 1.9E-36 4.2E-41 347.3 22.3 200 1267-1479 5-231 (255)
308 PRK14264 phosphate ABC transpo 100.0 2.4E-36 5.2E-41 354.0 23.3 207 1264-1479 42-277 (305)
309 TIGR00968 3a0106s01 sulfate AB 100.0 1.9E-36 4.1E-41 343.1 21.6 197 1268-1479 1-208 (237)
310 PRK14265 phosphate ABC transpo 100.0 2.6E-36 5.7E-41 348.8 23.2 202 1266-1476 19-234 (274)
311 PRK10771 thiQ thiamine transpo 100.0 3.4E-36 7.3E-41 340.2 23.5 195 1268-1479 2-207 (232)
312 PRK13643 cbiO cobalt transport 100.0 3.2E-36 6.9E-41 350.3 23.9 210 645-857 2-233 (288)
313 PRK13639 cbiO cobalt transport 100.0 2E-36 4.3E-41 350.2 21.9 200 1268-1479 2-214 (275)
314 PRK13638 cbiO cobalt transport 100.0 1.6E-36 3.4E-41 350.6 21.0 199 1268-1479 2-213 (271)
315 COG1131 CcmA ABC-type multidru 100.0 1.6E-36 3.5E-41 351.6 21.2 200 1267-1479 4-214 (293)
316 cd03215 ABC_Carb_Monos_II This 100.0 1.5E-36 3.2E-41 329.9 19.6 171 1267-1479 4-181 (182)
317 PRK14241 phosphate transporter 100.0 1.9E-36 4.1E-41 347.7 21.4 201 1267-1476 4-221 (258)
318 PRK09452 potA putrescine/sperm 100.0 2.8E-36 6E-41 359.8 23.6 209 643-858 13-235 (375)
319 PRK13536 nodulation factor exp 100.0 1.3E-36 2.8E-41 359.4 20.5 199 1267-1479 41-249 (340)
320 PRK14255 phosphate ABC transpo 100.0 2E-36 4.2E-41 346.5 21.3 204 1267-1479 5-224 (252)
321 PRK11248 tauB taurine transpor 100.0 2E-36 4.3E-41 346.1 21.3 192 1268-1477 2-204 (255)
322 cd03223 ABCD_peroxisomal_ALDP 100.0 2.3E-36 4.9E-41 323.1 20.3 163 1268-1478 1-163 (166)
323 PRK14263 phosphate ABC transpo 100.0 2.7E-36 5.8E-41 346.2 22.0 201 1267-1476 8-222 (261)
324 PRK10070 glycine betaine trans 100.0 1.7E-36 3.7E-41 363.1 21.0 186 1283-1479 42-242 (400)
325 cd03290 ABCC_SUR1_N The SUR do 100.0 4.4E-36 9.6E-41 336.0 23.1 198 646-845 2-218 (218)
326 PRK14258 phosphate ABC transpo 100.0 2.6E-36 5.7E-41 346.8 21.6 203 1266-1477 6-226 (261)
327 PRK13651 cobalt transporter AT 100.0 3.5E-36 7.7E-41 351.4 23.0 208 644-857 2-254 (305)
328 COG3842 PotA ABC-type spermidi 100.0 1.4E-36 3E-41 351.1 19.3 199 1266-1479 4-214 (352)
329 TIGR03608 L_ocin_972_ABC putat 100.0 1.4E-36 3.1E-41 337.0 18.7 193 1270-1475 1-206 (206)
330 PRK10851 sulfate/thiosulfate t 100.0 3.9E-36 8.6E-41 357.0 23.3 208 644-858 2-227 (353)
331 cd03296 ABC_CysA_sulfate_impor 100.0 3.9E-36 8.5E-41 341.2 22.3 207 644-857 2-226 (239)
332 PRK14275 phosphate ABC transpo 100.0 2.8E-36 6.2E-41 350.4 21.4 206 1265-1479 37-258 (286)
333 cd03299 ABC_ModC_like Archeal 100.0 2.9E-36 6.4E-41 341.1 20.9 196 1268-1479 1-207 (235)
334 PRK11022 dppD dipeptide transp 100.0 3.9E-36 8.4E-41 354.3 22.2 205 1267-1479 3-231 (326)
335 PRK11607 potG putrescine trans 100.0 3.4E-36 7.4E-41 359.7 22.0 199 1266-1479 18-227 (377)
336 TIGR01978 sufC FeS assembly AT 100.0 2.6E-36 5.6E-41 343.8 20.0 201 1268-1479 1-222 (243)
337 TIGR03258 PhnT 2-aminoethylpho 100.0 4.7E-36 1E-40 356.7 23.0 209 643-858 4-229 (362)
338 PRK11000 maltose/maltodextrin 100.0 4.6E-36 9.9E-41 359.2 22.9 208 644-858 3-224 (369)
339 PRK13537 nodulation ABC transp 100.0 5.9E-36 1.3E-40 350.3 23.3 209 643-858 6-228 (306)
340 cd03260 ABC_PstB_phosphate_tra 100.0 3.4E-36 7.4E-41 339.1 20.5 203 645-854 1-226 (227)
341 cd03219 ABC_Mj1267_LivG_branch 100.0 4.2E-36 9.1E-41 340.5 21.2 207 645-857 1-232 (236)
342 PRK15112 antimicrobial peptide 100.0 3.8E-36 8.1E-41 346.5 20.9 202 1267-1479 4-227 (267)
343 PRK09473 oppD oligopeptide tra 100.0 4E-36 8.6E-41 354.5 21.4 205 1267-1479 12-239 (330)
344 cd03259 ABC_Carb_Solutes_like 100.0 4E-36 8.8E-41 335.1 20.2 196 645-850 1-213 (213)
345 PRK13646 cbiO cobalt transport 100.0 7.9E-36 1.7E-40 346.9 23.2 207 644-857 2-235 (286)
346 PRK13647 cbiO cobalt transport 100.0 6E-36 1.3E-40 345.8 22.0 203 644-855 4-225 (274)
347 TIGR01188 drrA daunorubicin re 100.0 3.1E-36 6.7E-41 353.0 19.8 186 1282-1479 6-201 (302)
348 PRK11153 metN DL-methionine tr 100.0 7.7E-36 1.7E-40 354.6 23.2 207 645-858 2-231 (343)
349 PRK14272 phosphate ABC transpo 100.0 4.1E-36 8.8E-41 344.0 20.2 204 1267-1479 4-224 (252)
350 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.8E-36 1.3E-40 335.5 20.9 201 645-852 1-218 (220)
351 PRK13547 hmuV hemin importer A 100.0 8.3E-36 1.8E-40 343.3 22.7 199 1268-1479 2-232 (272)
352 cd03265 ABC_DrrA DrrA is the A 100.0 5.7E-36 1.2E-40 335.6 20.4 201 645-855 1-219 (220)
353 cd03248 ABCC_TAP TAP, the Tran 100.0 1.2E-35 2.5E-40 334.5 23.0 204 642-846 9-226 (226)
354 cd03226 ABC_cobalt_CbiO_domain 100.0 4.5E-36 9.9E-41 332.6 19.1 189 646-847 1-205 (205)
355 PRK14246 phosphate ABC transpo 100.0 7.1E-36 1.5E-40 341.9 21.1 205 1266-1479 9-229 (257)
356 cd03233 ABC_PDR_domain1 The pl 100.0 6.3E-36 1.4E-40 330.2 19.9 185 1267-1479 3-197 (202)
357 TIGR00960 3a0501s02 Type II (G 100.0 5.6E-36 1.2E-40 334.7 19.7 194 645-846 2-216 (216)
358 cd03369 ABCC_NFT1 Domain 2 of 100.0 2E-35 4.3E-40 328.1 23.7 189 643-851 5-206 (207)
359 PRK14250 phosphate ABC transpo 100.0 1.7E-35 3.6E-40 336.2 23.6 204 644-857 3-221 (241)
360 PRK13644 cbiO cobalt transport 100.0 1.5E-35 3.2E-40 342.5 23.5 204 645-857 2-224 (274)
361 TIGR02315 ABC_phnC phosphonate 100.0 1.1E-35 2.4E-40 338.5 22.2 206 645-855 2-233 (243)
362 COG4619 ABC-type uncharacteriz 100.0 4.1E-36 8.9E-41 300.8 16.1 195 1275-1479 9-211 (223)
363 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.8E-35 3.8E-40 335.2 23.6 207 645-858 2-222 (236)
364 cd03268 ABC_BcrA_bacitracin_re 100.0 1.1E-35 2.5E-40 330.3 21.6 192 645-850 1-208 (208)
365 PRK10418 nikD nickel transport 100.0 9.1E-36 2E-40 341.1 21.4 200 1267-1479 4-218 (254)
366 PRK14242 phosphate transporter 100.0 1.2E-35 2.7E-40 340.1 22.3 206 643-857 5-237 (253)
367 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 6.9E-36 1.5E-40 334.5 19.8 198 645-846 1-218 (218)
368 cd03234 ABCG_White The White s 100.0 8.5E-36 1.8E-40 335.5 20.6 198 1268-1479 4-221 (226)
369 PRK13635 cbiO cobalt transport 100.0 1.9E-35 4.1E-40 342.3 24.0 208 643-858 4-230 (279)
370 TIGR03740 galliderm_ABC gallid 100.0 1.1E-35 2.4E-40 333.9 21.4 195 1268-1479 1-201 (223)
371 PRK13641 cbiO cobalt transport 100.0 1.4E-35 3E-40 345.1 22.8 208 644-857 2-234 (287)
372 cd03256 ABC_PhnC_transporter A 100.0 1.1E-35 2.5E-40 338.1 21.6 207 645-856 1-233 (241)
373 cd03231 ABC_CcmA_heme_exporter 100.0 1.5E-35 3.2E-40 327.3 21.8 194 1268-1475 1-198 (201)
374 cd03224 ABC_TM1139_LivF_branch 100.0 1.1E-35 2.3E-40 334.0 21.0 203 645-856 1-220 (222)
375 COG1245 Predicted ATPase, RNas 100.0 3.5E-35 7.5E-40 334.0 25.1 161 1291-1476 363-530 (591)
376 COG4615 PvdE ABC-type sideroph 100.0 9.5E-33 2.1E-37 308.8 44.0 498 319-849 4-529 (546)
377 COG0410 LivF ABC-type branched 100.0 1.4E-35 3E-40 316.5 20.4 207 644-858 3-227 (237)
378 PRK09984 phosphonate/organopho 100.0 1.1E-35 2.5E-40 342.0 21.5 200 1267-1479 4-230 (262)
379 cd03213 ABCG_EPDR ABCG transpo 100.0 6.3E-36 1.4E-40 328.1 18.4 177 1267-1479 3-189 (194)
380 TIGR01288 nodI ATP-binding ABC 100.0 1.7E-35 3.8E-40 346.9 23.3 205 643-857 3-224 (303)
381 PRK15093 antimicrobial peptide 100.0 1.1E-35 2.4E-40 351.6 21.7 202 1267-1479 3-236 (330)
382 PRK09536 btuD corrinoid ABC tr 100.0 1.5E-35 3.3E-40 355.1 23.1 205 644-858 3-229 (402)
383 PRK11607 potG putrescine trans 100.0 2E-35 4.4E-40 353.1 24.0 210 642-858 17-240 (377)
384 PRK11629 lolD lipoprotein tran 100.0 1.6E-35 3.4E-40 334.9 21.9 201 644-851 5-228 (233)
385 cd03218 ABC_YhbG The ABC trans 100.0 1.4E-35 3.1E-40 335.3 21.5 206 645-857 1-222 (232)
386 TIGR03415 ABC_choXWV_ATP choli 100.0 9.3E-36 2E-40 354.2 20.8 187 1282-1479 37-242 (382)
387 PRK14269 phosphate ABC transpo 100.0 1.9E-35 4.1E-40 337.0 22.4 203 644-857 2-230 (246)
388 PRK14273 phosphate ABC transpo 100.0 2.3E-35 5E-40 338.0 23.1 206 643-857 6-238 (254)
389 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.2E-35 2.6E-40 337.8 20.7 209 645-857 1-225 (242)
390 cd03297 ABC_ModC_molybdenum_tr 100.0 1.1E-35 2.5E-40 331.7 19.9 194 1269-1479 3-209 (214)
391 PRK15079 oligopeptide ABC tran 100.0 1.5E-35 3.3E-40 349.3 22.0 211 642-858 6-252 (331)
392 cd03235 ABC_Metallic_Cations A 100.0 1.4E-35 3.1E-40 330.8 20.5 193 647-850 2-213 (213)
393 PRK11247 ssuB aliphatic sulfon 100.0 2.8E-35 6E-40 336.1 23.3 197 643-853 11-219 (257)
394 TIGR00972 3a0107s01c2 phosphat 100.0 2.3E-35 5E-40 336.6 22.5 208 644-857 1-232 (247)
395 cd03266 ABC_NatA_sodium_export 100.0 1.6E-35 3.5E-40 331.5 20.8 202 645-850 2-218 (218)
396 cd03257 ABC_NikE_OppD_transpor 100.0 1.9E-35 4.1E-40 333.4 21.2 204 645-850 2-228 (228)
397 PRK13636 cbiO cobalt transport 100.0 2.9E-35 6.3E-40 341.7 23.3 206 643-857 4-231 (283)
398 cd03301 ABC_MalK_N The N-termi 100.0 2E-35 4.3E-40 329.6 21.1 196 645-850 1-213 (213)
399 cd03258 ABC_MetN_methionine_tr 100.0 1.8E-35 3.9E-40 334.6 20.9 209 645-857 2-230 (233)
400 cd03214 ABC_Iron-Siderophores_ 100.0 1.2E-35 2.7E-40 322.0 18.8 172 1269-1479 1-175 (180)
401 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.4E-35 3E-40 342.0 20.3 203 646-858 26-251 (269)
402 PRK11144 modC molybdate transp 100.0 2.1E-35 4.5E-40 352.1 22.5 196 1268-1479 2-206 (352)
403 PRK13536 nodulation factor exp 100.0 2.5E-35 5.5E-40 348.3 22.8 209 642-857 39-261 (340)
404 cd03263 ABC_subfamily_A The AB 100.0 2.4E-35 5.2E-40 330.6 21.6 202 645-855 1-219 (220)
405 cd03217 ABC_FeS_Assembly ABC-t 100.0 1.8E-35 3.9E-40 326.2 20.2 175 1268-1479 1-182 (200)
406 PRK13640 cbiO cobalt transport 100.0 3.5E-35 7.7E-40 340.8 23.2 208 642-857 3-232 (282)
407 PRK11701 phnK phosphonate C-P 100.0 2.6E-35 5.7E-40 338.2 21.9 201 1267-1479 6-229 (258)
408 cd03247 ABCC_cytochrome_bd The 100.0 3.1E-35 6.7E-40 318.4 21.1 166 645-850 1-178 (178)
409 COG1131 CcmA ABC-type multidru 100.0 2E-35 4.4E-40 342.5 20.9 208 644-857 4-226 (293)
410 COG4555 NatA ABC-type Na+ tran 100.0 4.4E-36 9.6E-41 310.1 13.5 206 645-857 2-222 (245)
411 TIGR02211 LolD_lipo_ex lipopro 100.0 3.4E-35 7.4E-40 329.6 21.9 196 645-847 2-220 (221)
412 PRK13649 cbiO cobalt transport 100.0 4.1E-35 9E-40 340.5 23.3 208 644-857 2-234 (280)
413 PRK13538 cytochrome c biogenes 100.0 2.8E-35 6.1E-40 325.9 20.9 194 1268-1475 2-202 (204)
414 PRK13632 cbiO cobalt transport 100.0 4.7E-35 1E-39 338.2 23.4 207 643-857 6-231 (271)
415 PRK09493 glnQ glutamine ABC tr 100.0 4.2E-35 9.2E-40 333.0 22.5 203 645-857 2-225 (240)
416 PRK00349 uvrA excinuclease ABC 100.0 8.9E-35 1.9E-39 376.3 28.4 94 763-856 483-584 (943)
417 PRK10744 pstB phosphate transp 100.0 4.7E-35 1E-39 336.4 23.1 206 643-857 12-244 (260)
418 PRK13642 cbiO cobalt transport 100.0 4.9E-35 1.1E-39 338.9 23.4 211 644-858 4-230 (277)
419 PRK11831 putative ABC transpor 100.0 3E-35 6.5E-40 339.4 21.4 206 643-858 6-234 (269)
420 PRK13645 cbiO cobalt transport 100.0 3.5E-35 7.6E-40 342.4 22.1 212 643-857 5-240 (289)
421 cd03232 ABC_PDR_domain2 The pl 100.0 1.6E-35 3.5E-40 324.5 18.0 176 1267-1479 3-187 (192)
422 cd03269 ABC_putative_ATPase Th 100.0 3.4E-35 7.3E-40 327.0 20.5 199 645-850 1-210 (210)
423 PRK09544 znuC high-affinity zi 100.0 5.3E-35 1.1E-39 333.2 22.5 187 1267-1477 4-196 (251)
424 KOG0066 eIF2-interacting prote 100.0 1.3E-34 2.8E-39 324.4 25.1 182 1267-1472 586-772 (807)
425 PRK10419 nikE nickel transport 100.0 4.4E-35 9.6E-40 337.7 22.0 203 1267-1479 3-229 (268)
426 PRK13633 cobalt transporter AT 100.0 7.2E-35 1.6E-39 338.0 23.8 209 643-858 3-234 (280)
427 PRK14235 phosphate transporter 100.0 6E-35 1.3E-39 336.5 22.9 211 641-857 16-251 (267)
428 PRK10619 histidine/lysine/argi 100.0 5E-35 1.1E-39 335.7 22.0 205 643-857 4-241 (257)
429 TIGR03415 ABC_choXWV_ATP choli 100.0 3.8E-35 8.3E-40 349.0 21.6 192 660-858 37-255 (382)
430 PRK13648 cbiO cobalt transport 100.0 8.6E-35 1.9E-39 335.8 23.5 210 643-857 6-231 (269)
431 COG1137 YhbG ABC-type (unclass 100.0 4.8E-36 1.1E-40 309.5 11.6 207 644-858 4-229 (243)
432 PRK11264 putative amino-acid A 100.0 5E-35 1.1E-39 334.6 21.3 207 644-857 3-233 (250)
433 PRK11231 fecE iron-dicitrate t 100.0 8.3E-35 1.8E-39 333.5 23.0 204 644-857 2-227 (255)
434 PRK11300 livG leucine/isoleuci 100.0 8.3E-35 1.8E-39 333.7 23.0 210 643-857 4-243 (255)
435 PRK13548 hmuV hemin importer A 100.0 1.2E-34 2.6E-39 332.3 24.2 207 644-857 2-230 (258)
436 COG4175 ProV ABC-type proline/ 100.0 2.1E-35 4.6E-40 323.5 17.0 209 643-859 3-256 (386)
437 PRK14274 phosphate ABC transpo 100.0 8.8E-35 1.9E-39 334.0 23.0 206 643-857 11-243 (259)
438 PRK10584 putative ABC transpor 100.0 8.3E-35 1.8E-39 328.1 22.3 200 643-849 5-227 (228)
439 PRK10070 glycine betaine trans 100.0 4.8E-35 1E-39 350.6 21.6 191 661-858 42-255 (400)
440 PRK13543 cytochrome c biogenes 100.0 8.7E-35 1.9E-39 324.3 22.2 196 1267-1478 11-213 (214)
441 PRK14248 phosphate ABC transpo 100.0 1E-34 2.2E-39 335.2 23.4 211 642-857 19-252 (268)
442 PRK11614 livF leucine/isoleuci 100.0 1.1E-34 2.5E-39 328.9 23.5 205 644-857 5-226 (237)
443 TIGR03410 urea_trans_UrtE urea 100.0 4.4E-35 9.5E-40 330.8 19.8 202 645-855 1-219 (230)
444 TIGR02142 modC_ABC molybdenum 100.0 5E-35 1.1E-39 349.4 21.3 193 1272-1479 4-209 (354)
445 PRK10895 lipopolysaccharide AB 100.0 7.8E-35 1.7E-39 331.0 21.9 207 644-857 3-226 (241)
446 cd03223 ABCD_peroxisomal_ALDP 100.0 7.3E-35 1.6E-39 311.4 20.3 162 645-845 1-164 (166)
447 PRK10247 putative ABC transpor 100.0 6.6E-35 1.4E-39 327.9 21.0 203 643-853 6-223 (225)
448 PRK15056 manganese/iron transp 100.0 8.5E-35 1.8E-39 336.2 22.5 196 1267-1479 6-218 (272)
449 PRK14268 phosphate ABC transpo 100.0 9.3E-35 2E-39 333.5 22.6 206 643-857 11-242 (258)
450 PRK14237 phosphate transporter 100.0 1E-34 2.2E-39 334.6 23.0 205 642-857 18-251 (267)
451 PRK13638 cbiO cobalt transport 100.0 9.7E-35 2.1E-39 335.7 22.8 203 645-857 2-225 (271)
452 cd03216 ABC_Carb_Monos_I This 100.0 7.9E-35 1.7E-39 310.2 20.3 156 1268-1479 1-159 (163)
453 cd03292 ABC_FtsE_transporter F 100.0 5.9E-35 1.3E-39 326.1 20.2 196 645-846 1-214 (214)
454 TIGR02769 nickel_nikE nickel i 100.0 7.5E-35 1.6E-39 335.5 21.6 209 644-858 2-241 (265)
455 TIGR02324 CP_lyasePhnL phospho 100.0 6.9E-35 1.5E-39 327.8 20.8 199 1268-1476 2-223 (224)
456 PRK10575 iron-hydroxamate tran 100.0 1E-34 2.2E-39 334.4 22.7 210 642-857 9-237 (265)
457 cd03264 ABC_drug_resistance_li 100.0 6.1E-35 1.3E-39 325.2 19.9 194 645-850 1-211 (211)
458 PRK14245 phosphate ABC transpo 100.0 1.2E-34 2.5E-39 331.4 22.7 210 643-857 2-234 (250)
459 PRK13652 cbiO cobalt transport 100.0 1.5E-34 3.2E-39 334.9 23.8 205 644-857 3-227 (277)
460 PRK14259 phosphate ABC transpo 100.0 1.5E-34 3.3E-39 333.3 23.7 207 642-857 11-253 (269)
461 PRK14247 phosphate ABC transpo 100.0 1.1E-34 2.4E-39 331.7 22.3 205 644-857 3-234 (250)
462 PRK10253 iron-enterobactin tra 100.0 1.2E-34 2.7E-39 333.7 22.9 210 642-857 5-233 (265)
463 PRK14238 phosphate transporter 100.0 1.2E-34 2.6E-39 334.6 22.8 212 642-858 22-256 (271)
464 PRK11022 dppD dipeptide transp 100.0 8.7E-35 1.9E-39 342.9 22.0 210 644-858 3-244 (326)
465 PRK14239 phosphate transporter 100.0 1.2E-34 2.7E-39 331.7 22.6 209 644-857 5-236 (252)
466 PRK13540 cytochrome c biogenes 100.0 7.8E-35 1.7E-39 321.3 20.2 193 1268-1474 2-198 (200)
467 PRK11124 artP arginine transpo 100.0 1.2E-34 2.6E-39 329.7 22.3 203 644-856 2-229 (242)
468 TIGR03411 urea_trans_UrtD urea 100.0 1.4E-34 3E-39 329.2 22.9 208 644-857 2-231 (242)
469 cd03225 ABC_cobalt_CbiO_domain 100.0 6.3E-35 1.4E-39 325.1 19.3 192 646-845 1-211 (211)
470 COG4555 NatA ABC-type Na+ tran 100.0 3.8E-35 8.2E-40 303.2 16.1 199 1268-1479 2-210 (245)
471 PRK14240 phosphate transporter 100.0 1.5E-34 3.2E-39 330.7 22.6 205 644-857 3-234 (250)
472 TIGR02673 FtsE cell division A 100.0 6.2E-35 1.3E-39 325.9 19.1 192 645-845 2-214 (214)
473 cd03267 ABC_NatA_like Similar 100.0 7E-35 1.5E-39 330.0 19.7 186 1282-1479 34-231 (236)
474 TIGR03005 ectoine_ehuA ectoine 100.0 1.1E-34 2.4E-39 332.0 21.5 203 645-857 1-236 (252)
475 cd03246 ABCC_Protease_Secretio 100.0 8.1E-35 1.8E-39 313.6 19.2 160 645-846 1-173 (173)
476 PRK14249 phosphate ABC transpo 100.0 1.7E-34 3.7E-39 330.2 23.0 205 644-857 4-235 (251)
477 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.3E-34 2.9E-39 322.4 21.5 197 645-850 1-211 (211)
478 CHL00131 ycf16 sulfate ABC tra 100.0 1.1E-34 2.4E-39 332.1 21.4 201 1267-1479 7-229 (252)
479 PRK10908 cell division protein 100.0 1.6E-34 3.4E-39 324.4 22.2 197 645-847 2-216 (222)
480 TIGR03873 F420-0_ABC_ATP propo 100.0 1.4E-34 3E-39 331.8 22.1 206 645-857 2-226 (256)
481 COG0410 LivF ABC-type branched 100.0 1.1E-34 2.3E-39 309.6 19.4 201 1267-1479 3-214 (237)
482 PRK14244 phosphate ABC transpo 100.0 1.2E-34 2.5E-39 331.6 21.1 204 645-857 6-237 (251)
483 PRK14270 phosphate ABC transpo 100.0 1.6E-34 3.4E-39 330.5 22.3 204 643-857 3-235 (251)
484 TIGR03522 GldA_ABC_ATP gliding 100.0 1.7E-34 3.6E-39 338.1 22.7 206 644-857 2-221 (301)
485 COG4178 ABC-type uncharacteriz 100.0 4.1E-31 8.8E-36 320.8 52.8 442 389-842 106-587 (604)
486 PRK13539 cytochrome c biogenes 100.0 1.6E-34 3.5E-39 320.5 21.4 192 1268-1476 3-199 (207)
487 PRK11308 dppF dipeptide transp 100.0 1.6E-34 3.5E-39 340.4 22.7 210 643-858 4-245 (327)
488 COG1118 CysA ABC-type sulfate/ 100.0 5.7E-35 1.2E-39 320.7 17.4 198 1267-1479 2-215 (345)
489 TIGR01188 drrA daunorubicin re 100.0 8.3E-35 1.8E-39 341.0 20.1 194 660-857 6-213 (302)
490 PRK13639 cbiO cobalt transport 100.0 1.5E-34 3.4E-39 334.4 22.0 204 645-857 2-226 (275)
491 PRK14251 phosphate ABC transpo 100.0 2.2E-34 4.8E-39 329.4 22.7 205 644-857 4-235 (251)
492 TIGR01184 ntrCD nitrate transp 100.0 1.2E-34 2.5E-39 326.9 20.1 179 1285-1479 1-192 (230)
493 TIGR02323 CP_lyasePhnK phospho 100.0 1.7E-34 3.7E-39 330.7 21.7 201 1267-1479 3-226 (253)
494 TIGR03740 galliderm_ABC gallid 100.0 1.8E-34 4E-39 324.1 21.4 196 645-854 1-210 (223)
495 PRK14236 phosphate transporter 100.0 2.5E-34 5.4E-39 332.3 23.1 211 642-857 23-256 (272)
496 PRK09984 phosphonate/organopho 100.0 2.6E-34 5.6E-39 330.8 23.1 206 644-855 4-240 (262)
497 PRK11248 tauB taurine transpor 100.0 2.1E-34 4.5E-39 329.5 22.0 198 645-852 2-215 (255)
498 PRK14267 phosphate ABC transpo 100.0 1.8E-34 4E-39 330.4 21.6 208 644-857 4-237 (253)
499 PRK14243 phosphate transporter 100.0 3.2E-34 6.9E-39 329.9 23.5 205 643-858 9-249 (264)
500 PRK09473 oppD oligopeptide tra 100.0 1.9E-34 4.1E-39 340.3 21.9 212 642-858 10-252 (330)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-274 Score=2610.67 Aligned_cols=1220 Identities=49% Similarity=0.802 Sum_probs=1142.7
Q ss_pred CCCcccCch--hHHHHHHhHHHHHHccccCCCCCCCCCCCCccchHHHHHHHHHhcCCCCCCC--CCcchHHHHHHHHHH
Q 000463 253 VSGFASASI--LSKAFWIWMNPLLSKGYKSPLKIDEIPSLSPQHRAERMSELFESKWPKPHEK--CKHPVRTTLLRCFWK 328 (1479)
Q Consensus 253 ~~p~~~a~~--~s~~~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~--~~~~l~~~l~~~~~~ 328 (1479)
++|.+.++. +|+++|||++|++++|||++|+.+|+|+|+++|+++.+.++|+++|+++.++ ++|+++++++++||+
T Consensus 122 ~~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~~~~~psl~~al~~~f~~ 201 (1381)
T KOG0054|consen 122 PNPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGRSGKKPSLLRALLRTFGR 201 (1381)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhccccCCcHHHHHHHHHHHH
Confidence 445555555 9999999999999999999999999999999999999999999999988543 478999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 329 EVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITSL 408 (1479)
Q Consensus 329 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR~~L~~~I 408 (1479)
++++.++++++.+.+.|++|.+|+.+|+|+++++.+.+.||+|++++|++.++++++.|||+|.++++|+|+|++|+++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~I 281 (1381)
T KOG0054|consen 202 TFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAI 281 (1381)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999877788999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 409 YRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVITTVVGIIGVMIFVVMG 488 (1479)
Q Consensus 409 y~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~il~~~~~~~~ 488 (1479)
|||+|++++.++++++.|+|+|+|++|++|+++++.++|.+|++|+|+++++++||+++|+++++|++++++++|+|.++
T Consensus 282 Y~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~ 361 (1381)
T KOG0054|consen 282 YRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFL 361 (1381)
T ss_pred HHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 489 TKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWSTPVLISTL 568 (1479)
Q Consensus 489 ~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~p~~v~~~ 568 (1479)
+++++++|++.|+.+|+|++.|||+|+|||+|||||||++|.++|+++|++|++++||..|+.+++.++++++|++++++
T Consensus 362 a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~ 441 (1381)
T KOG0054|consen 362 AKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVV 441 (1381)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccccCCCCCccEEE
Q 000463 569 TFATAL-LFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEV 647 (1479)
Q Consensus 569 tF~~~~-l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~ 647 (1479)
||++|+ +.|+.++++++|+++++||+|+.|+.++|+.++.++|++||++|+++||..+|.+++..++.+.++.+.+|++
T Consensus 442 tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~i 521 (1381)
T KOG0054|consen 442 TFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENAIEI 521 (1381)
T ss_pred HHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCceEEE
Confidence 999999 6788999999999999999999999999999999999999999999999999998877664445556678999
Q ss_pred EeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCeEEEEeccCcCCCCcHHHH
Q 000463 648 RDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGTTAYVAQTSWIQNGTIEEN 727 (1479)
Q Consensus 648 ~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~iayv~Q~~~i~~~Tv~en 727 (1479)
+|++|+|+++++.++|+||||+|++|+++||||++||||||||++|+||+++.+|+|.++|.+|||||+|||+|+|||||
T Consensus 522 ~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv~Q~pWI~ngTvreN 601 (1381)
T KOG0054|consen 522 KNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYVPQQPWIQNGTVREN 601 (1381)
T ss_pred eeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEeccccHhhCCcHHHh
Confidence 99999999765667999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHH
Q 000463 728 ILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSD 807 (1479)
Q Consensus 728 I~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~ 807 (1479)
|+||.|+|+++|++|+++|+|++|++.+|.||+|+|||||.||||||||||+||||+|+|+||||||||+||||+|+++|
T Consensus 602 ILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~ 681 (1381)
T KOG0054|consen 602 ILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKH 681 (1381)
T ss_pred hhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCC
Q 000463 808 IFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNS 887 (1479)
Q Consensus 808 i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~ 887 (1479)
||++|+++.+++||+|+|||+++++++||+|++|+||+|.++|+|+|+++.+.+|.++..+.+ .+..+. ...+. .
T Consensus 682 if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~--~~~~~~-~~~~~--~ 756 (1381)
T KOG0054|consen 682 IFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEE--SEQEEE-ASEKD--L 756 (1381)
T ss_pred HHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccc--hhhccc-ccccc--c
Confidence 999999999999999999999999999999999999999999999999999999998833222 111110 00000 0
Q ss_pred CCCCCCCccc-cccccccCCCcccccccccCCCchhhhHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhh
Q 000463 888 PKTPKSPQIT-SNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLM 966 (1479)
Q Consensus 888 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~ 966 (1479)
+......... ...+...... ......+....++.++|+++.|.+++++|+.|+++.+|++.+++++++.++.+++.+
T Consensus 757 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~ 834 (1381)
T KOG0054|consen 757 ESGESSRESESRSLESLSSEE--EKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQI 834 (1381)
T ss_pred cccccccchhhhhhhhhcccc--cccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 0000000000 0000000000 001112223567888899999999999999999998888888888899999999999
Q ss_pred hhhhhcccccccCCCCC---CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCc
Q 000463 967 AGDYWLSYETSEDHSMS---FNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPS 1043 (1479)
Q Consensus 967 ~~~~wl~~~~~~~~~~~---~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~ 1043 (1479)
+++||+++|++...... .+...|+++|+++++++.++.++|++.+..++.++|+.+|++|+++++|+||+|||+||+
T Consensus 835 ~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~ 914 (1381)
T KOG0054|consen 835 ASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPT 914 (1381)
T ss_pred HHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCc
Confidence 99999999997643222 467889999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000463 1044 GRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKA 1123 (1479)
Q Consensus 1044 G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~s 1123 (1479)
|||+||||+|++.+|..+|..+..++..+++++++++++++.+|+++++++|+.++++++++||++++||++|+++++||
T Consensus 915 GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRS 994 (1381)
T KOG0054|consen 915 GRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRS 994 (1381)
T ss_pred cchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCcChh
Q 000463 1124 PVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPE 1203 (1479)
Q Consensus 1124 p~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g 1203 (1479)
|+++||+||++|+.|||||+++++|.+++..++|.+++++|...+++||+++|+|+++++++++++++++..+.+..+||
T Consensus 995 Pi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g 1074 (1381)
T KOG0054|consen 995 PIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPG 1074 (1381)
T ss_pred hHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888776658899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCCCc
Q 000463 1204 NVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPL 1283 (1479)
Q Consensus 1204 ~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~ 1283 (1479)
.+|++++|++++++.++|++++.+++|++|+||||+.||.++|+|+|+..+..+||++||++|+|+|+|+++||+|+.|+
T Consensus 1075 ~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~lp~ 1154 (1381)
T KOG0054|consen 1075 LVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPNLPL 1154 (1381)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCCCcc
Confidence 99999999999999999999999999999999999999999999988777777799999999999999999999999999
Q ss_pred ceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhc
Q 000463 1284 VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNI 1363 (1479)
Q Consensus 1284 vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NL 1363 (1479)
|||||||+|+||||||||||||||||||+++|||+.||.+|+|.|||+||+++++|+||++++||||||+||+||+|+||
T Consensus 1155 VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NL 1234 (1381)
T KOG0054|consen 1155 VLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNL 1234 (1381)
T ss_pred hhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHH
Q 000463 1364 DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI 1443 (1479)
Q Consensus 1364 dp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~I 1443 (1479)
||+++|+|+|||+|||+|+|+++|+++|+|||++|.|+|+|||.||||++||||||||++||||||||||++|++||..|
T Consensus 1235 DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lI 1314 (1381)
T KOG0054|consen 1235 DPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALI 1314 (1381)
T ss_pred CcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1444 QRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1444 q~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|++||++|+|||||+||||++||+|||||+|||+|+
T Consensus 1315 Q~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~ 1350 (1381)
T KOG0054|consen 1315 QKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGR 1350 (1381)
T ss_pred HHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCe
Confidence 999999999999999999999999999999999996
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.5e-213 Score=2164.94 Aligned_cols=1410 Identities=33% Similarity=0.553 Sum_probs=1182.6
Q ss_pred hccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCCccccccccccccchhHHHHHHHHHHHHHHHHHH
Q 000463 35 FIFLSPCPQRALLSFVDLLFLLALIVFAVQKLYSKFTASGLSSSDISKPLIRNNRASVRTTLWFKLSLIVTALLALCFTV 114 (1479)
Q Consensus 35 ~~~~~~c~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1479)
+..++||++++++.|+|++|+++++++.++... +... .. ++.. ...+......+.+++|....++...
T Consensus 26 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (1622)
T PLN03130 26 FGAYTPCATDSLVINISHLVLLGLCLYRIWLIK-KDHK-VQ------RFCL----RSKWYNYFLALLAAYCTAEPLFRLV 93 (1622)
T ss_pred cCCCCccHHhhHHHHHHHHHHHHHHHHHHHHhc-cccc-cC------Cccc----cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 334999999999999999999999988887652 2100 10 1110 0011112333344444444444433
Q ss_pred HHHHHhccCCCCc--cchHH-HHHHHHHHHHHHHHHHHHHHhhccccccCChHHHHHHHHH---HHHHHHHhhHHHHHHh
Q 000463 115 ICILTFSGSTQWP--WKLVD-ALFWLVHAITHAVIAILIVHEKKFEAVTHPLSLRIYWVAN---FIIVSLFTTSGIIRLV 188 (1479)
Q Consensus 115 ~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~~---~~~~~~~~~~~~~~~~ 188 (1479)
.++..+..+.... ...+. ++.+++..++++++.++...++. ++.++++.+++||++. ++|.++.. .....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 169 (1622)
T PLN03130 94 MGISVLNLDGQTSLPPFEIVSLIVEALTWCSMLVMIGVETKIYI-REFRWYVRFAVIYVLVGDAVMLNLVLS---VKEYY 169 (1622)
T ss_pred HHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHH-hcCCCcceeehhHHHhhHHHHHHHHHH---HHHHH
Confidence 3333322222112 22333 55566677777766665444544 5678999999999998 66655511 11111
Q ss_pred hhhhhhccccccccchhhHHHHHHHHHHHHH-HHcccccccC-CCCCCCCcccccccc-cccCCCCCCCCcccCchhHHH
Q 000463 189 SFETAQFCSLKLDDIVSIVSFPLLTVLLFIA-IRGSTGIAVN-SDSEPGMDEKTKLYE-PLLSKSDVVSGFASASILSKA 265 (1479)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~a~~~s~~ 265 (1479)
.+. .. ...+..+.+.+.+.++. +... +.... ...... .+.+...+ ++...+.+++||++||++||+
T Consensus 170 ~~~-----~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~ 238 (1622)
T PLN03130 170 SSF-----VL----YLYISEVAAQVLFGILLLVYFP-NLDPYPGYTPIG-SESVDDYEYEELPGGEQICPERHANIFSRI 238 (1622)
T ss_pred hcc-----cc----ceehhHHHHHHHHHHHHHHHHh-cCCCCccccccc-ccccccccccCCcccCCCCcccccCHHHHH
Confidence 110 00 11333333333322222 1111 11110 000000 00000000 112234678999999999999
Q ss_pred HHHhHHHHHHccccCCCCCCCCCCCCccchHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 266 FWIWMNPLLSKGYKSPLKIDEIPSLSPQHRAERMSELFESKWPKPHEKCKHPVRTTLLRCFWKEVAFTAFLAIVRLCVMY 345 (1479)
Q Consensus 266 ~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~ 345 (1479)
+|+|++|++++|||++|+.+|||+|+++|+++.++++|++.|+++.++++|+++++++++||+.++.+++++++.+++.+
T Consensus 239 ~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~ 318 (1622)
T PLN03130 239 FFGWMTPLMQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEELKKPKPWLLRALNNSLGGRFWLGGFFKIGNDLSQF 318 (1622)
T ss_pred HHHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998766677999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhccCCH
Q 000463 346 VGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITSLYRKGLRLSCSARQAHGV 425 (1479)
Q Consensus 346 ~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~ 425 (1479)
++|++++.+++++.+++ ..+.||.++++++++.++.+++.++|++...++++++|+.+...+|+|.++++...+++.++
T Consensus 319 ~~P~ll~~li~~v~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~ 397 (1622)
T PLN03130 319 VGPLLLNLLLESMQNGE-PAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTS 397 (1622)
T ss_pred HHHHHHHHHHHHHhcCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCH
Confidence 99999999999997654 34678888888888888888888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 426 GQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDS 505 (1479)
Q Consensus 426 G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~il~~~~~~~~~~~~~~~q~~~m~~~D~ 505 (1479)
|+++|+|++|++++.+++.++|.+|..|+++++++++||..+|+++++|++++++++|++.++++++++.++++|+.+|+
T Consensus 398 G~ivnl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~ 477 (1622)
T PLN03130 398 GKITNLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDK 477 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCHHHH
Q 000463 506 RMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWSTPVLISTLTFATALLFGVPLDAGSV 585 (1479)
Q Consensus 506 R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~p~~v~~~tF~~~~l~~~~Lt~~~v 585 (1479)
|++.++|+|+|||+||+|+||+.|.+++++.|++|++..++..+..++..+++...|.++++++|++|.+.++++|++.+
T Consensus 478 r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~v 557 (1622)
T PLN03130 478 RIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARA 557 (1622)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999988888888888988899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccccCCCCCccEEEEeeEEEecCCCCccccee
Q 000463 586 FTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKN 665 (1479)
Q Consensus 586 Ft~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~ 665 (1479)
|+++++|++++.|+..+|..+..+.++++|++||++||+.+|....... +.......|+++|++|+|++.+++++|+|
T Consensus 558 f~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~~--~~~~~~~~I~~~nvsf~y~~~~~~~vL~~ 635 (1622)
T PLN03130 558 FTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPNP--PLEPGLPAISIKNGYFSWDSKAERPTLSN 635 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccCC--cccCCCCceEEEeeEEEccCCCCCceeec
Confidence 9999999999999999999999999999999999999987765322111 11112346999999999975445689999
Q ss_pred eeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCC-cEEEECCeEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHH
Q 000463 666 INLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKIS-GKVKVCGTTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVR 744 (1479)
Q Consensus 666 i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~-G~i~~~g~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~ 744 (1479)
+||++++||+++|+||+|||||||+++|+|+++|++ |+|.++|++|||+|+||++++||||||+||.++++++|+++++
T Consensus 636 inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~ 715 (1622)
T PLN03130 636 INLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAID 715 (1622)
T ss_pred eeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEE
Q 000463 745 VCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIIL 824 (1479)
Q Consensus 745 ~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvil 824 (1479)
+|+|.+|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||+|++++++++++++.++|||+|+
T Consensus 716 a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIl 795 (1622)
T PLN03130 716 VTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVL 795 (1622)
T ss_pred HhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988888999999
Q ss_pred EccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCcccccccccc
Q 000463 825 VTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEAN 904 (1479)
Q Consensus 825 vTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 904 (1479)
|||+++.++.||+|++|++|+|+++|+++|+++.++.|.++...+....+..+...+.. ..+...............
T Consensus 796 VTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 872 (1622)
T PLN03130 796 VTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEEE---DDQTSSKPVANGNANNLK 872 (1622)
T ss_pred EECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhccccccccccccccc---cccccccccccccccccc
Confidence 99999999999999999999999999999999888888887765321111000000000 000000000000000000
Q ss_pred CCCcccccccccCCCchhhhHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCC
Q 000463 905 GENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSF 984 (1479)
Q Consensus 905 ~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~ 984 (1479)
+ +..+....+.....+.++|+++.|.+++++|+.|+++.++++.+.+++++.++.+++.+++++|+++|++.......
T Consensus 873 -~-~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~ 950 (1622)
T PLN03130 873 -K-DSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTH 950 (1622)
T ss_pred -c-cccccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence 0 00000011112234567788899999999999999987776666666677778888899999999999864222223
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHH
Q 000463 985 NPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFF 1064 (1479)
Q Consensus 985 ~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~ 1064 (1479)
....|+++|++++++..++.+++.++....+.++++++|++++++++++|++|||++|+|+|+|||++|++.+|..++..
T Consensus 951 ~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~ 1030 (1622)
T PLN03130 951 GPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVF 1030 (1622)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 34668889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCc
Q 000463 1065 VGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGK 1144 (1479)
Q Consensus 1065 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~ 1144 (1479)
+..++..++.+++.++++++.+|..+++++|+.++++.++++|.+++|+++|++..+++|+++|+.|+++|+.|||+|++
T Consensus 1031 ~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~ 1110 (1622)
T PLN03130 1031 VNMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKA 1110 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcH
Confidence 99999999999999999888888777788888888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHhccC----CcChhHHHHHHHHHHHHHHHHH
Q 000463 1145 QTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSS----IIKPENVGLSLSYGLSLNGVLF 1220 (1479)
Q Consensus 1145 ~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~----~~~~g~vgl~l~y~~~l~~~l~ 1220 (1479)
+++|.+.+.+..|.+.+..+.....++|+++++++++.+++.+...+.+..... ...++.+|++++|++.+...+.
T Consensus 1111 ~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~ 1190 (1622)
T PLN03130 1111 YDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLT 1190 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999887666555444432211 1126789999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEE
Q 000463 1221 WAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGV 1300 (1479)
Q Consensus 1221 ~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgI 1300 (1479)
++++.+..+|+.++|+||+.+|.+.|+|++...++..+++.||.+|.|+|+||+|+|+++.++||+|+||+|+|||||||
T Consensus 1191 ~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaI 1270 (1622)
T PLN03130 1191 AVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGI 1270 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEE
Confidence 99999999999999999999999999887654344456678999999999999999998877899999999999999999
Q ss_pred ECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCCCCCCHHHHHHHHHH
Q 000463 1301 VGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLER 1380 (1479)
Q Consensus 1301 VGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~ 1380 (1479)
|||||||||||+++|+|+|+|++|+|+|||+||++++++++|++|++|||||+||+||||+||||+++++|+|||+||++
T Consensus 1271 VGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~ 1350 (1622)
T PLN03130 1271 VGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLER 1350 (1622)
T ss_pred ECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEc
Q 000463 1381 CQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIA 1460 (1479)
Q Consensus 1381 ~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IA 1460 (1479)
++++++|.++|+||||+|+|+|.||||||||||||||||||+|+|||||||||+||.+||+.||++|++.+++||+|+||
T Consensus 1351 a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IA 1430 (1622)
T PLN03130 1351 AHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIA 1430 (1622)
T ss_pred cCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhhhhcCEEEEEeCCC
Q 000463 1461 HRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1461 HRl~ti~~~DrIlVL~~G~ 1479 (1479)
||++|+++||||+|||+|+
T Consensus 1431 HRL~tI~~~DrIlVLd~G~ 1449 (1622)
T PLN03130 1431 HRLNTIIDCDRILVLDAGR 1449 (1622)
T ss_pred CChHHHHhCCEEEEEECCE
Confidence 9999999999999999996
No 3
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=8.7e-209 Score=2121.44 Aligned_cols=1403 Identities=31% Similarity=0.527 Sum_probs=1173.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHhh-hccccCCCCCCCCCccccccccccccchhHHHHHHHHHHHHHHHHHHH
Q 000463 37 FLSPCPQRALLSFVDLLFLLALIVFAVQKLY-SKFTASGLSSSDISKPLIRNNRASVRTTLWFKLSLIVTALLALCFTVI 115 (1479)
Q Consensus 37 ~~~~c~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1479)
.++|||+++++.|+|++|+++++++.++... +++ . . .+.. ...+......+.++++....++....
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~-----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (1495)
T PLN03232 28 AYTPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAK---A-Q-----IYVL----RKKYYNCVLGILACYCVVEPVLRLVM 94 (1495)
T ss_pred CCCccHHhhHHHHHHHHHHHHHHHHHHHHHhhccc---c-C-----Cccc----cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3999999999999999999999988777552 122 1 0 1110 00011112223333333333333222
Q ss_pred HHHHhccCC--CCccchHH-HHHHHHHHHHHHHHHHHHHHhhccccccCChHHHHHHHHH---HHHHHHHhhHHHHHHhh
Q 000463 116 CILTFSGST--QWPWKLVD-ALFWLVHAITHAVIAILIVHEKKFEAVTHPLSLRIYWVAN---FIIVSLFTTSGIIRLVS 189 (1479)
Q Consensus 116 ~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~~---~~~~~~~~~~~~~~~~~ 189 (1479)
++..+..+. +....++. ++.+++..++++++..+...++. ++.++++++++||++. ++|.++.. ......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 170 (1495)
T PLN03232 95 GISLFDMDEETDLPPFEVASLMVEAFAWFSMLVLIGLETKQYV-KEFRWYVRFGVVYVLVADAVLLDLVLP---LKNSIN 170 (1495)
T ss_pred HhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHH-hcCCCCceeeehhHhhhhHHHHHHHHH---HHHHHh
Confidence 222221111 11123333 55677777777777775555544 5688999999999998 66665511 111111
Q ss_pred hhhhhccccccccchhhHHHHHHHHHHHHH-HHcccccccCCCCCCCCcccccc-cc-cccCCCCCCCCcccCchhHHHH
Q 000463 190 FETAQFCSLKLDDIVSIVSFPLLTVLLFIA-IRGSTGIAVNSDSEPGMDEKTKL-YE-PLLSKSDVVSGFASASILSKAF 266 (1479)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~p~~~a~~~s~~~ 266 (1479)
+. . ....+..+.+.+.+.+.. +... +....+.-+....+ ... .. +..+.+.+.+||++||+|||++
T Consensus 171 ~~-----~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~pe~~a~~~s~~~ 239 (1495)
T PLN03232 171 RT-----A----LYLCISSRCCQALFGILLLVYIP-ELDPYPGYHILNNE-SLDNVEYDALRGGENICPERYASIFSRIY 239 (1495)
T ss_pred cc-----c----cceehhHHHHHHHHHHHHHHhcc-cCCCCCcccccccc-cccccccccccccCCCCccccCCHHHHHH
Confidence 10 0 011333333333322222 1111 11110000000000 000 00 1112246789999999999999
Q ss_pred HHhHHHHHHccccCCCCCCCCCCCCccchHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 267 WIWMNPLLSKGYKSPLKIDEIPSLSPQHRAERMSELFESKWPKPHEKCKHPVRTTLLRCFWKEVAFTAFLAIVRLCVMYV 346 (1479)
Q Consensus 267 f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~ 346 (1479)
|+|++|++++|||++|+.+|||+|+++|+++.++++|++.|+++.++++++++++++++||+.++.+++++++.+++.++
T Consensus 240 f~w~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~ 319 (1495)
T PLN03232 240 FSWMTPLMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEESRRPKPWLLRALNNSLGGRFWLGGIFKIGHDLSQFV 319 (1495)
T ss_pred HHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987666678999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhccCCHH
Q 000463 347 GPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITSLYRKGLRLSCSARQAHGVG 426 (1479)
Q Consensus 347 ~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G 426 (1479)
+|++++.+++++++++ ..+.||.++++++++.++.+++.++|++...++++++|+.+...+|+|.++++....++.++|
T Consensus 320 ~P~ll~~li~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G 398 (1495)
T PLN03232 320 GPVILSHLLQSMQEGD-PAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFASG 398 (1495)
T ss_pred HHHHHHHHHHHHhcCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHH
Confidence 9999999999997654 346789999999999999999999999999999999999999999999999999999889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 427 QIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSR 506 (1479)
Q Consensus 427 ~ivnlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~il~~~~~~~~~~~~~~~q~~~m~~~D~R 506 (1479)
+++|+|++|++++.++..++|.+|..|++++++++++|..+|+++++|++++++++|++.++++++++.++++|+.+|+|
T Consensus 399 ~i~n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r 478 (1495)
T PLN03232 399 KVTNMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKR 478 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCHHHHH
Q 000463 507 MKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWSTPVLISTLTFATALLFGVPLDAGSVF 586 (1479)
Q Consensus 507 ~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~p~~v~~~tF~~~~l~~~~Lt~~~vF 586 (1479)
.+.++|+++|||+||+|+||+.|.+++++.|++|++..++..+..+...+++...|.++++++|++|.+.++++|++.+|
T Consensus 479 ~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf 558 (1495)
T PLN03232 479 VGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARAF 558 (1495)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999988888777777788888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccccCCCCCccEEEEeeEEEecCCCCcccceee
Q 000463 587 TTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNI 666 (1479)
Q Consensus 587 t~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i 666 (1479)
+++++++.+..|+..+|..+..+.++++|++||++||+.+|...+... +.......|+++|++|+|++..++++|+|+
T Consensus 559 ~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~~--~~~~~~~~I~~~~vsF~y~~~~~~~vL~~i 636 (1495)
T PLN03232 559 TSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQNP--PLQPGAPAISIKNGYFSWDSKTSKPTLSDI 636 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccC--CcCCCCCcEEEEeeEEEcCCCCCCceeeee
Confidence 999999999999999999999999999999999999987653221110 111123479999999999754456899999
Q ss_pred eEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCc-EEEECCeEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHH
Q 000463 667 NLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISG-KVKVCGTTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRV 745 (1479)
Q Consensus 667 ~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G-~i~~~g~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~ 745 (1479)
||++++||+++|+||+|||||||+++|+|+++|++| .+.+++++|||+|+||++++||||||+||.++++++|++++++
T Consensus 637 nl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~ 716 (1495)
T PLN03232 637 NLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDV 716 (1495)
T ss_pred EEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHH
Confidence 999999999999999999999999999999999997 4577899999999999999999999999999999999999999
Q ss_pred hchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEE
Q 000463 746 CCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILV 825 (1479)
Q Consensus 746 ~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilv 825 (1479)
|++.+|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++++.+.+++||+|+|
T Consensus 717 ~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~Ilv 796 (1495)
T PLN03232 717 TALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLV 796 (1495)
T ss_pred hCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887889999999
Q ss_pred ccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccC
Q 000463 826 THQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANG 905 (1479)
Q Consensus 826 TH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (1479)
||+++.++.||+|++|++|+|+++|+++|+++.++.|.++...+....+..+. .+ + ........... ..+. .
T Consensus 797 TH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~-~~-~---~~~~~~~~~~~--~~~~-~ 868 (1495)
T PLN03232 797 TNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEV-NT-N---DENILKLGPTV--TIDV-S 868 (1495)
T ss_pred ECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhcccccccccc-cc-c---ccccccccccc--cccc-c
Confidence 99999999999999999999999999999998888888877554321110000 00 0 00000000000 0000 0
Q ss_pred CCcccccccccCCCchhhhHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCC
Q 000463 906 ENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFN 985 (1479)
Q Consensus 906 ~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~ 985 (1479)
+.+.....+.+.....+.++|+++.|.+++++|+.|+++.++++.+.+++++.++.+++.+++++|+++|++........
T Consensus 869 ~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~ 948 (1495)
T PLN03232 869 ERNLGSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTPKSYS 948 (1495)
T ss_pred ccccccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Confidence 00000000011112245678889999999999999999877766666666777778888899999999998642211233
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHH
Q 000463 986 PSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFV 1065 (1479)
Q Consensus 986 ~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~ 1065 (1479)
...|+++|++++++..++.+++.+++...+.++++++|++++++++++|++|||++|+|+++||+++|++.+|..++..+
T Consensus 949 ~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~ 1028 (1495)
T PLN03232 949 PGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLM 1028 (1495)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHH
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcH
Q 000463 1066 GITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQ 1145 (1479)
Q Consensus 1066 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~ 1145 (1479)
..++..++.+++.+++++..++...++++|+.++++.++.+|.+++|+++|.+..+++|+++|+.|+++|+.|||+|+++
T Consensus 1029 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~ 1108 (1495)
T PLN03232 1029 NMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAY 1108 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcH
Confidence 99999888888888888887777777778888888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-----ChhHHHHHHHHHHHHHHHHH
Q 000463 1146 TTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSII-----KPENVGLSLSYGLSLNGVLF 1220 (1479)
Q Consensus 1146 ~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~-----~~g~vgl~l~y~~~l~~~l~ 1220 (1479)
++|.+++.+..|.+.+..+.....++|+.+++++++.+++.+...+.+.. .+.+ .++.+|++++|+..+...+.
T Consensus 1109 ~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~l~ 1187 (1495)
T PLN03232 1109 DRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLR-NGNAENQAGFASTMGLLLSYTLNITTLLS 1187 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cccccccccchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888999999999988766555444443322 2221 25678889999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEE
Q 000463 1221 WAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGV 1300 (1479)
Q Consensus 1221 ~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgI 1300 (1479)
++++.+.++|+.++|+||+.+|.+.|+|++...+...+++.||.+|.|+|+||+|+|+++.++||+|+||+|+|||||||
T Consensus 1188 ~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaI 1267 (1495)
T PLN03232 1188 GVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGV 1267 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEE
Confidence 99999999999999999999999998886543233345668999999999999999988777899999999999999999
Q ss_pred ECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCCCCCCHHHHHHHHHH
Q 000463 1301 VGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLER 1380 (1479)
Q Consensus 1301 VGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~ 1380 (1479)
|||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+|||+||++
T Consensus 1268 VG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~~ 1347 (1495)
T PLN03232 1268 VGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALER 1347 (1495)
T ss_pred ECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEc
Q 000463 1381 CQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIA 1460 (1479)
Q Consensus 1381 ~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IA 1460 (1479)
++++++|+++|+||||+|+|+|.||||||||||||||||+|+|+|||||||||+||.+||+.||++|++.+++||+|+||
T Consensus 1348 a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IA 1427 (1495)
T PLN03232 1348 AHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIA 1427 (1495)
T ss_pred cCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhhhhcCEEEEEeCCC
Q 000463 1461 HRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1461 HRl~ti~~~DrIlVL~~G~ 1479 (1479)
||++|+++||||+|||+|+
T Consensus 1428 HRl~ti~~~DrIlVL~~G~ 1446 (1495)
T PLN03232 1428 HRLNTIIDCDKILVLSSGQ 1446 (1495)
T ss_pred CCHHHHHhCCEEEEEECCE
Confidence 9999999999999999996
No 4
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.3e-207 Score=2110.17 Aligned_cols=1403 Identities=33% Similarity=0.558 Sum_probs=1174.9
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCCccccccccccccchhHHHHHHHHHHHHHHHHHHH
Q 000463 36 IFLSPCPQRALLSFVDLLFLLALIVFAVQKLYSKFTASGLSSSDISKPLIRNNRASVRTTLWFKLSLIVTALLALCFTVI 115 (1479)
Q Consensus 36 ~~~~~c~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1479)
.+++|||++++++++|..+++++.+..++... +. .+ . ..+.++++..+..++..+.++.+..
T Consensus 21 ~d~t~~f~~~~~~~~p~~~~~~~~~~~~~~l~-~~--~~-------~--------~~~~~~~~~~k~~~~~~~~~~~~~~ 82 (1522)
T TIGR00957 21 PDFTKCFQNTVLAWVPCFYLWVCFPCYFLYLS-RH--DR-------G--------YIQMTHLNKTKTALGFLLWIVCWAD 82 (1522)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHHHhh-cc--CC-------C--------cCCcchHHHHHHHHHHHHHHHHHHH
Confidence 55899999999999999999999976666543 11 00 0 1122333334433333333322211
Q ss_pred HHHHhccCCCCc-cchHHHHHHHHHHHHHHHHHHHHHHhhccccccCChHHHHHHHHHHHHHHHHhhHHHHHHhhhhhhh
Q 000463 116 CILTFSGSTQWP-WKLVDALFWLVHAITHAVIAILIVHEKKFEAVTHPLSLRIYWVANFIIVSLFTTSGIIRLVSFETAQ 194 (1479)
Q Consensus 116 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1479)
....++...... ..+..+..+++..++|++++++...+++ ++.+.|..+.+||+++++|.++.+++........
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~-~~~~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~---- 157 (1522)
T TIGR00957 83 LFYSFWERSHGRAPAPVFLVSPTLLGITMLLATFLIQLERR-KGVQSSGIMLTFWLVALVCALAILRSKILLALKE---- 157 (1522)
T ss_pred HHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHh-cccCCCcchhHHHHHHHHHHHHHHHHHHHHhhcc----
Confidence 122222221111 1134455667788888777766656554 3467789999999999999888777543221100
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHcccccccCCCCCCCCcccccccccccCCCCCCCCcccCchhHHHHHHhHHHHH
Q 000463 195 FCSLKLDDIVSIVSFPLLTVLLFIAIRGSTGIAVNSDSEPGMDEKTKLYEPLLSKSDVVSGFASASILSKAFWIWMNPLL 274 (1479)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~s~~~f~W~~~l~ 274 (1479)
.... .......+...+.+....+...... . +. |.+.++ ....+.+||++||++||++|||++|++
T Consensus 158 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~-~~~~~~--~~~~~~~~e~~a~~~s~~~f~W~~pl~ 222 (1522)
T TIGR00957 158 --DAIV-DPFRDTTFYIYFALVLSQLVLSCFS-----D----KS-PLFSET--NHDPNPCPESSASFLSRITFWWITGMA 222 (1522)
T ss_pred --cccc-cceehhhHHHHHHHHHHHHHHHhhc-----C----CC-Cccccc--cccCCCCCcccCCHHHHHHHHHhHHHH
Confidence 0000 0000111111111111111111100 0 11 332210 112346899999999999999999999
Q ss_pred HccccCCCCCCCCCCCCccchHHHHHHHHHhcCCCCC-----------------------------------------CC
Q 000463 275 SKGYKSPLKIDEIPSLSPQHRAERMSELFESKWPKPH-----------------------------------------EK 313 (1479)
Q Consensus 275 ~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~-----------------------------------------~~ 313 (1479)
++|||++|+.+|||+++++++++.++++|++.|+++. +.
T Consensus 223 ~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (1522)
T TIGR00957 223 VYGYRQPLEESDLWSLNKEDTSEMVVPVLVENWKKECKKTRKQPVSAVYGKKDPSKPKGSSQLDANEEVEALIVKSPHKP 302 (1522)
T ss_pred HHHhcCCCChhhccCCCHhHhHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999997531 11
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 314 CKHPVRTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNS 393 (1479)
Q Consensus 314 ~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~ 393 (1479)
++++|+++++++||+.++..++++++.+++.+++|++++.+|+|+++++.+.+.||+++++++++.++.+++.++|+|..
T Consensus 303 ~~~sl~~~l~~~~~~~~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (1522)
T TIGR00957 303 RKPSLFKVLYKTFGPYFLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHIC 382 (1522)
T ss_pred CCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999999999999999999999999999999999999977655566799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 394 QKLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVIT 473 (1479)
Q Consensus 394 ~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~ 473 (1479)
.++|+++|++|++.||+|+|+++..+++++++|+++|+|++|++|+.++..++|.+|..|+++++++++||..+|+++++
T Consensus 383 ~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~ 462 (1522)
T TIGR00957 383 FVSGMRIKTAVMGAVYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLNLGPSVLA 462 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 474 TVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISG 553 (1479)
Q Consensus 474 gl~~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~ 553 (1479)
|++++++++|++.+++++++++++++|+.+|+|++.++|+++|||+||+|+||+.|.+++++.|++|++..++..+....
T Consensus 463 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~ 542 (1522)
T TIGR00957 463 GVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAV 542 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh--cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccc
Q 000463 554 NIIVMWSTPVLISTLTFATALLF--GVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNE 631 (1479)
Q Consensus 554 ~~~~~~~~p~~v~~~tF~~~~l~--~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~ 631 (1479)
..+.+...|.++.+++|++|.+. ++.|+++.+|+++++|++++.|+..+|..+..+.++++|++||++||+.+|.++.
T Consensus 543 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~ 622 (1522)
T TIGR00957 543 GTFTWVCTPFLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPD 622 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 88778889999999999998876 4679999999999999999999999999999999999999999999987765433
Q ss_pred ccccccC-CCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCeE
Q 000463 632 SVERVEG-CDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGTT 710 (1479)
Q Consensus 632 ~~~~~~~-~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~i 710 (1479)
..+.... ......|+++|++|+|+++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|++
T Consensus 623 ~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~i 701 (1522)
T TIGR00957 623 SIERRTIKPGEGNSITVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKGSV 701 (1522)
T ss_pred cccccccCCCCCCcEEEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECCEE
Confidence 2111111 1112379999999999642 3579999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 711 AYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 711 ayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
|||||+||++++||+|||.||.++++++|++++++|++.+|++.+|.||+|.+|++|.+|||||||||+||||+|++||+
T Consensus 702 ~yv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~i 781 (1522)
T TIGR00957 702 AYVPQQAWIQNDSLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADI 781 (1522)
T ss_pred EEEcCCccccCCcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHh--hhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHHH
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVR--GALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVAA 868 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~--~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~ 868 (1479)
||||||||+||+++++++++.++. +.++++|+|+|||+++.++.||+|++|++|++++.|+++++.++++.|.++...
T Consensus 782 llLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~~ 861 (1522)
T TIGR00957 782 YLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRDGAFAEFLRT 861 (1522)
T ss_pred EEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcchhHHHHHHh
Confidence 999999999999999999998874 466799999999999999999999999999999999999999888888887754
Q ss_pred hhhhhhhhhccccCC---CCCCCC----CC--CC----Ccc-cc---ccccccCC--Cc--cc---ccccccCCCchhhh
Q 000463 869 HETSMELVEVGKTMP---SGNSPK----TP--KS----PQI-TS---NLQEANGE--NK--SV---EQSNSDKGNSKLIK 924 (1479)
Q Consensus 869 ~~~~~~~~~~~~~~~---~~~~~~----~~--~~----~~~-~~---~~~~~~~~--~~--~~---~~~~~~~~~~~l~~ 924 (1479)
+....+..+..+..+ ..+... +. .. ... .. ........ .. .. +..+.++...+..+
T Consensus 862 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1522)
T TIGR00957 862 YAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLME 941 (1522)
T ss_pred hccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhHH
Confidence 322111000000000 000000 00 00 000 00 00000000 00 00 00001111234567
Q ss_pred HHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCC--CCCCCcchhHHHHHHHHHHHHH
Q 000463 925 EEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH--SMSFNPSLFIGVYGSTAVLSMV 1002 (1479)
Q Consensus 925 ~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~--~~~~~~~~~~~vy~~l~~~~~~ 1002 (1479)
+|+++.|.+++++|+.|+++.+ +..+++++++.++.+++..++++|+++|++... ....+...|+++|++++++..+
T Consensus 942 ~e~~~~g~v~~~~y~~Y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~ 1020 (1522)
T TIGR00957 942 ADKAQTGQVELSVYWDYMKAIG-LFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGF 1020 (1522)
T ss_pred HHHHhcCcccHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHHH
Confidence 7888899999999999999874 444555556667778888999999999986421 1122345678899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000463 1003 ILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIIT 1082 (1479)
Q Consensus 1003 ~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~ 1082 (1479)
+.+++.++....+.++++++|++++++++++|++|||++|+|+++|||++|++.+|..++..+..++..++.+++.++++
T Consensus 1021 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~ 1100 (1522)
T TIGR00957 1021 AVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVI 1100 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhh
Q 000463 1083 CQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRM 1162 (1479)
Q Consensus 1083 ~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~ 1162 (1479)
++.+|.++++++|+++++++++++|.+++|++++++..+++|+++|+.|+++|+.|||+|+++++|.+++.+..|.++++
T Consensus 1101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~ 1180 (1522)
T TIGR00957 1101 LLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKA 1180 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHh
Q 000463 1163 DFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQF 1242 (1479)
Q Consensus 1163 ~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~ 1242 (1479)
.+.....++|++.++++++.+++.++..+.+ ...+.+++|.+|++++|+..+..++.++++.+.++|+.++|+||+.+|
T Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~ 1259 (1522)
T TIGR00957 1181 YYPSIVANRWLAVRLECVGNCIVLFAALFAV-ISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEY 1259 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998765554444433 235678999999999999999999999999999999999999999999
Q ss_pred hcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCC
Q 000463 1243 TEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS 1322 (1479)
Q Consensus 1243 ~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~ 1322 (1479)
.+.|+|.+...+...+++.||.+|.|+|+||+|+|+++.++||+||||+|+||||||||||||||||||+++|+|+++|+
T Consensus 1260 ~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~ 1339 (1522)
T TIGR00957 1260 SETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESA 1339 (1522)
T ss_pred hcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCC
Confidence 99888765333344566789999999999999999987778999999999999999999999999999999999999999
Q ss_pred ccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCC
Q 000463 1323 GGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSG 1402 (1479)
Q Consensus 1323 ~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1402 (1479)
+|+|+|||+||+++++++||++|++|||||+||+||||+||||+++++|+|||+||++|+++++|.++|+||||+|+|+|
T Consensus 1340 ~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G 1419 (1522)
T TIGR00957 1340 EGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGG 1419 (1522)
T ss_pred CCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1403 DNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1403 ~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
.||||||||||||||||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++|+++||||+|||+|+
T Consensus 1420 ~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~ 1496 (1522)
T TIGR00957 1420 ENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGE 1496 (1522)
T ss_pred CcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4e-196 Score=1992.28 Aligned_cols=1218 Identities=29% Similarity=0.490 Sum_probs=1069.7
Q ss_pred CCCcccCchhHHHHHHhHHHHHHccccCCCCCCCCCCCCccchHHHHHHHHHhcCCCCC--CCCCcchHHHHHHHHHHHH
Q 000463 253 VSGFASASILSKAFWIWMNPLLSKGYKSPLKIDEIPSLSPQHRAERMSELFESKWPKPH--EKCKHPVRTTLLRCFWKEV 330 (1479)
Q Consensus 253 ~~p~~~a~~~s~~~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~--~~~~~~l~~~l~~~~~~~~ 330 (1479)
.+||++||++||++|||++|++++|||++|+.+|||+|+++++++.++++|++.|+++. +.++++|+++++++||+.+
T Consensus 3 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~L~~~l~~~~~~~~ 82 (1490)
T TIGR01271 3 RSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELASAKKNPKLLNALRRCFFWRF 82 (1490)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999998643 2456899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 331 AFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSS-FYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITSLY 409 (1479)
Q Consensus 331 ~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~-~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR~~L~~~Iy 409 (1479)
++.++++++.+++.+++|++++.+|+|++.++.. .+.||+++++++++.++++++.++++|...++|+++|++|+++||
T Consensus 83 ~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy 162 (1490)
T TIGR01271 83 VFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIY 162 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999643322 457999999999999999999999999999999999999999999
Q ss_pred HHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 410 RKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVITTVVGIIGVMIFVVMGT 489 (1479)
Q Consensus 410 ~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~il~~~~~~~~~ 489 (1479)
+|+|+++..+.++.++|+++|+|++|++++.+++.++|.+|..|+++++++++||.++|+++++|++++++++|++.+++
T Consensus 163 ~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~ 242 (1490)
T TIGR01271 163 KKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLG 242 (1490)
T ss_pred HHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 490 KRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWSTPVLISTLT 569 (1479)
Q Consensus 490 ~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~p~~v~~~t 569 (1479)
+++.++++++|+.+|+|++.++|+|+|||+||+|+||+.|.++|++.|++|++.+++..++.+...++++..|.++++++
T Consensus 243 ~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (1490)
T TIGR01271 243 QKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVFLS 322 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888888889999999999
Q ss_pred HHHHHHhcCccCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccccCcccccccccCCCCCccEEEE
Q 000463 570 FATALLFGVPLDAGSVFTTTTIFKILQEPIR-NFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEVR 648 (1479)
Q Consensus 570 F~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~-~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~ 648 (1479)
|++|.+.++ ++++++||++++|++|+.|+. .+|..+..+.++.+|++||++||..+|.++.... .....++++
T Consensus 323 f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~-----~~~~~i~~~ 396 (1490)
T TIGR01271 323 VVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEYN-----LTTTEVEMV 396 (1490)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccc-----CCCCceEEe
Confidence 999988754 789999999999999999985 7999999999999999999999998876432110 122369999
Q ss_pred eeEEEecCC-------------------------------CCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCc
Q 000463 649 DGVFSWDDE-------------------------------NGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEM 697 (1479)
Q Consensus 649 ~~~f~~~~~-------------------------------~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~ 697 (1479)
|++|+|+.. ..+++|+|+||+|++|++++|+|||||||||||++|+|++
T Consensus 397 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~~ 476 (1490)
T TIGR01271 397 NVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGEL 476 (1490)
T ss_pred cceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 999999531 0146899999999999999999999999999999999999
Q ss_pred ccCCcEEEECCeEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHH
Q 000463 698 HKISGKVKVCGTTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQR 777 (1479)
Q Consensus 698 ~~~~G~i~~~g~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 777 (1479)
+|++|+|.++|++|||+|+||++++||+|||+||.++++++|++++++|+|.+|++.+|.||+|.+|++|.+||||||||
T Consensus 477 ~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqR 556 (1490)
T TIGR01271 477 EPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRAR 556 (1490)
T ss_pred CCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHHHH
Confidence 99999999999999999999999999999999999888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHh
Q 000463 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 778 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|+||||+|++|++|||||||||||+++++++++.++....+|+|+|+|||+++.++.||+|++|++|++++.|+++++.+
T Consensus 557 i~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l~~ 636 (1490)
T TIGR01271 557 ISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSELQA 636 (1490)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999988877778999999999999999999999999999999999999987
Q ss_pred cCcchHHHHHHhhhhhh------------h-----hh-cc-----c-c------CCCCCC-CC-----------------
Q 000463 858 SGMDFGALVAAHETSME------------L-----VE-VG-----K-T------MPSGNS-PK----------------- 889 (1479)
Q Consensus 858 ~~~~f~~l~~~~~~~~~------------~-----~~-~~-----~-~------~~~~~~-~~----------------- 889 (1479)
.+..|...........+ . .+ .. . . .+.... .+
T Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1490)
T TIGR01271 637 KRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASARKFS 716 (1490)
T ss_pred cChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 66666555431100000 0 00 00 0 0 000000 00
Q ss_pred ------------C-C-CCCcc--------cc-----------cc--------------------ccccCCCcc-------
Q 000463 890 ------------T-P-KSPQI--------TS-----------NL--------------------QEANGENKS------- 909 (1479)
Q Consensus 890 ------------~-~-~~~~~--------~~-----------~~--------------------~~~~~~~~~------- 909 (1479)
. . ..... +. .. .....+.+.
T Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1490)
T TIGR01271 717 FVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQTSF 796 (1490)
T ss_pred cccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccc
Confidence 0 0 00000 00 00 000000000
Q ss_pred -------------cc--------ccc----------ccCCCchhhhHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHH
Q 000463 910 -------------VE--------QSN----------SDKGNSKLIKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLS 958 (1479)
Q Consensus 910 -------------~~--------~~~----------~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~ 958 (1479)
.. ..+ .+.....+.++|+++.|.++|++|+.|+++.+++..+++++++.
T Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~~~~~~~~~~~~ 876 (1490)
T TIGR01271 797 RKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNRNLVFVLIFCLVI 876 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 00 000 00001234667788899999999999999876666555666667
Q ss_pred HHHHHHhhhhhhhcccccccC------CCC-C-----------C-Ccchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 959 VAWQGSLMAGDYWLSYETSED------HSM-S-----------F-NPSLF-IGVYGSTAVLSMVILVVRAYFVTHVGLKT 1018 (1479)
Q Consensus 959 ~~~~~~~~~~~~wl~~~~~~~------~~~-~-----------~-~~~~~-~~vy~~l~~~~~~~~~~~~~~~~~~~~~~ 1018 (1479)
++.+++..+.++|+.+|.+.. ... . . ....| +++|++++++..++.+++.+++.+.+.++
T Consensus 877 ~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (1490)
T TIGR01271 877 FLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTLLTV 956 (1490)
T ss_pred HHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788899999999998876421 000 0 0 11122 45566666666778888999999999999
Q ss_pred HHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000463 1019 AQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAW 1098 (1479)
Q Consensus 1019 s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~ 1098 (1479)
++++|.+++++++++|++||+++|+|+++|||++|++.+|..++..+..++..++.+++.++++++.+|+++++++|+++
T Consensus 957 ~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~~~l~~ 1036 (1490)
T TIGR01271 957 SKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAAIPVAV 1036 (1490)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888889888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHH
Q 000463 1099 ANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLE 1178 (1479)
Q Consensus 1099 ~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~ 1178 (1479)
++++++++|.+.+|++++++..+++|+++||.|+++|+.|||+|+++++|.+++.+..|.+.+..+.....++|+..+++
T Consensus 1037 ~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~ 1116 (1490)
T TIGR01271 1037 IFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMRID 1116 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhcccc----
Q 000463 1179 LLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKME---- 1254 (1479)
Q Consensus 1179 ~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~---- 1254 (1479)
+++.+.+..+.++.+. ...+++|.+|++++|++.+...+.++++.+.++|+.+.|+||+.+|.+.|+|.+...+
T Consensus 1117 ~i~~~~~~~~~~l~~~--~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~~~ 1194 (1490)
T TIGR01271 1117 IIFVFFFIAVTFIAIG--TNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGGGK 1194 (1490)
T ss_pred HHHHHHHHHHHHHHHH--HhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc
Confidence 9876654443333222 2345778899999999999999999999999999999999999999998877542111
Q ss_pred ----------CCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCcc
Q 000463 1255 ----------DRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGG 1324 (1479)
Q Consensus 1255 ----------~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G 1324 (1479)
...+|+.||..|.|+|+||+|+|+++.++||+||||+|+||||||||||||||||||+++|+|+++ .+|
T Consensus 1195 ~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G 1273 (1490)
T TIGR01271 1195 YQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEG 1273 (1490)
T ss_pred cccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCc
Confidence 123456799999999999999999877889999999999999999999999999999999999998 799
Q ss_pred EEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCC
Q 000463 1325 RIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN 1404 (1479)
Q Consensus 1325 ~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1404 (1479)
+|+|||+||++++++++|++|++|||||+||+||||+||||+++++|++||+||++++++++|.++|+||||+|+|+|.|
T Consensus 1274 ~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~n 1353 (1490)
T TIGR01271 1274 EIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYV 1353 (1490)
T ss_pred EEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccccccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1405 WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1405 LSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||||||||||||||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++|+++||||+|||+|+
T Consensus 1354 LSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~ 1428 (1490)
T TIGR01271 1354 LSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGSS 1428 (1490)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.4e-187 Score=1904.93 Aligned_cols=1226 Identities=30% Similarity=0.490 Sum_probs=1061.9
Q ss_pred CCCCCcccCchhHHHHHHhHHHHHHccccCCCCCCCCCCCCccchHHHHHHHHH----------hcCCCCC---------
Q 000463 251 DVVSGFASASILSKAFWIWMNPLLSKGYKSPLKIDEIPSLSPQHRAERMSELFE----------SKWPKPH--------- 311 (1479)
Q Consensus 251 ~~~~p~~~a~~~s~~~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~----------~~w~~~~--------- 311 (1479)
..+.||++||||.++++.|++|++.+..|..|+.+|||+...+.|+-++.-++. +.|+...
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (1560)
T PTZ00243 57 YTPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLD 136 (1560)
T ss_pred CCCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeecc
Confidence 456899999999999999999999999999999999999999999865544432 2454210
Q ss_pred ------------------------------------------------------C-------------------------
Q 000463 312 ------------------------------------------------------E------------------------- 312 (1479)
Q Consensus 312 ------------------------------------------------------~------------------------- 312 (1479)
+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (1560)
T PTZ00243 137 ASSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSS 216 (1560)
T ss_pred ccccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeecc
Confidence 0
Q ss_pred ------------CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHH
Q 000463 313 ------------KCKHPVRTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKF 380 (1479)
Q Consensus 313 ------------~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~ 380 (1479)
.+..+|+++++++||+.++..++++++.+++.+++|++|+.+++|+++++.....|++++++++++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~ 296 (1560)
T PTZ00243 217 TGSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQL 296 (1560)
T ss_pred cccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHH
Confidence 01237999999999999999999999999999999999999999997665433468899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhc--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 381 VEVFSTHQFNFNSQKLGMLIRCTLITSLYRKGLRLSCSARQ--AHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISV 458 (1479)
Q Consensus 381 ~~~~~~~~~~~~~~~~g~riR~~L~~~Iy~K~L~ls~~~~~--~~~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~l 458 (1479)
+++++.++|+|...+.|+++|++|.+.+|+|+++++..+.+ +.++|+++|+|++|++++.+++.++|.+|.+|+++++
T Consensus 297 ~~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~ 376 (1560)
T PTZ00243 297 IQSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLL 376 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987765 5689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHH
Q 000463 459 ALILLYNCLGASVITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRE 538 (1479)
Q Consensus 459 al~lL~~~lG~s~l~gl~~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~ 538 (1479)
++++||..+|+++++|++++++++|++.++++++.++++++|+.+|+|++.++|+++|||+||+||||+.|.++|++.|+
T Consensus 377 ~~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~ 456 (1560)
T PTZ00243 377 SILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRA 456 (1560)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 539 SEFGWLTKFMYSISGNIIVMWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLAR 618 (1479)
Q Consensus 539 ~El~~l~k~~~~~a~~~~~~~~~p~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~R 618 (1479)
+|++.+++..+..++..++++++|.++++++|++|++.|++||++++|+++++|++++.|+.++|..++.+.++.+|++|
T Consensus 457 ~El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~R 536 (1560)
T PTZ00243 457 RELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKR 536 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCccccc----cc-----------------------------cc-------------------------CCC
Q 000463 619 LDKYMLSRELVNESV----ER-----------------------------VE-------------------------GCD 640 (1479)
Q Consensus 619 I~~fL~~~e~~~~~~----~~-----------------------------~~-------------------------~~~ 640 (1479)
|++||..+|...... +. .+ ...
T Consensus 537 I~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (1560)
T PTZ00243 537 ISTFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRH 616 (1560)
T ss_pred HHHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccc
Confidence 999998776311000 00 00 000
Q ss_pred CCccEEEEeeEEEecCC-------------------------------------CCcccceeeeEEEeCCcEEEEEcCCC
Q 000463 641 DNIAVEVRDGVFSWDDE-------------------------------------NGEECLKNINLEIKKGDLTAIVGTVG 683 (1479)
Q Consensus 641 ~~~~i~~~~~~f~~~~~-------------------------------------~~~~~L~~i~l~i~~G~~~~ivG~~G 683 (1479)
....+.++|++|+|+.. +++++|+|+||+|++|++++|+||||
T Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nG 696 (1560)
T PTZ00243 617 PSPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATG 696 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCC
Confidence 11245667766664310 13468999999999999999999999
Q ss_pred CChHHHHHHHhcCcccCCcEEEECCeEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccc
Q 000463 684 SGKSSLLASILGEMHKISGKVKVCGTTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEI 763 (1479)
Q Consensus 684 sGKSTLl~~llG~~~~~~G~i~~~g~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~i 763 (1479)
|||||||++|+|+++|++|+|.+++++|||||+||++++||+|||.|+.++++++|++++++|++++|++.+|+|++|.+
T Consensus 697 sGKSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i 776 (1560)
T PTZ00243 697 SGKSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEI 776 (1560)
T ss_pred CcHHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHh
Confidence 99999999999999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred ccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeC
Q 000463 764 GERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMRE 843 (1479)
Q Consensus 764 g~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~ 843 (1479)
|++|.+|||||||||+||||+|++|++||||||||+||++++++++++++.+..+|+|+|+|||+++.++.||+|++|++
T Consensus 777 ~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~ 856 (1560)
T PTZ00243 777 GEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGD 856 (1560)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999999888766689999999999999999999999999
Q ss_pred CEEEEecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCC-cccccccccCCCchh
Q 000463 844 GMIVQSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGEN-KSVEQSNSDKGNSKL 922 (1479)
Q Consensus 844 G~i~~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 922 (1479)
|++.++|+++++.+.+ .+..+........+..+.....+......................+. ...+....+....++
T Consensus 857 G~i~~~G~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 935 (1560)
T PTZ00243 857 GRVEFSGSSADFMRTS-LYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGRL 935 (1560)
T ss_pred CEEEEecCHHHHHhCh-HHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence 9999999999998643 45555443211100000000000000000000000000000000000 000000111122456
Q ss_pred hhHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHH
Q 000463 923 IKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMV 1002 (1479)
Q Consensus 923 ~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~ 1002 (1479)
.++|+++.|.++|++|+.|++..+++..+++++++.++.+++..++++|+++|++.. ...+...|+++|+++.++..+
T Consensus 936 ~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~--~~~~~~~~l~~y~~~~~~~~~ 1013 (1560)
T PTZ00243 936 MTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRS--FKLSAATYLYVYLGIVLLGTF 1013 (1560)
T ss_pred hhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--cCCCcccHHHHHHHHHHHHHH
Confidence 777888899999999999999887666656666666777888899999999998632 123345788899998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000463 1003 ILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIIT 1082 (1479)
Q Consensus 1003 ~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~ 1082 (1479)
+.+++.+.....+.++++++|++++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+++.++++
T Consensus 1014 ~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~ 1093 (1560)
T PTZ00243 1014 SVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVT 1093 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhh
Q 000463 1083 CQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRM 1162 (1479)
Q Consensus 1083 ~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~ 1162 (1479)
++.+|.++++++|+.++++.+.++|.+..|+++|....+++|++++++|+++|+.|||+|+.++.|.+++.+..|.+.+.
T Consensus 1094 ~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~ 1173 (1560)
T PTZ00243 1094 SASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSC 1173 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 98888877788888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH---HhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 000463 1163 DFHNNGSNEWLGFRLELLGSFTFCLATLFMI---LLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERI 1239 (1479)
Q Consensus 1163 ~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v---~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi 1239 (1479)
.+.....++|+++++++++.++.++.+++.+ ....+.+++|.++++++|+..+...+.++++.+.++|+.+.|+||+
T Consensus 1174 ~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi 1253 (1560)
T PTZ00243 1174 SYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERL 1253 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998776554443332 2233456789999999999999999999999999999999999999
Q ss_pred HHhhc-Cccchhcc-----------------------ccCCCCC---CCCCCCccEEEEeeeeeecCCCCcceeeeeEEE
Q 000463 1240 KQFTE-IPSEAAWK-----------------------MEDRLPP---PNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSI 1292 (1479)
Q Consensus 1240 ~~~~~-~~~E~~~~-----------------------~~~~~~~---~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I 1292 (1479)
.+|.+ .|+|+... .+...++ +.||..|.|+|+||+|+|+++.++||+||||+|
T Consensus 1254 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vsf~I 1333 (1560)
T PTZ00243 1254 LYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVSFRI 1333 (1560)
T ss_pred HHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecceEEE
Confidence 99996 44432110 0011122 235677999999999999988788999999999
Q ss_pred eCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCCCCCCHH
Q 000463 1293 HGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDE 1372 (1479)
Q Consensus 1293 ~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~ 1372 (1479)
+||||||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+||||+||||+++++|+
T Consensus 1334 ~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sde 1413 (1560)
T PTZ00243 1334 APREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSA 1413 (1560)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccC-CCEEEEeCCCCCCCHHhHHHHHHHHHHHc
Q 000463 1373 EIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKH-SRLLFMDEATASVDSQTDAEIQRIIREEF 1451 (1479)
Q Consensus 1373 eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~-~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f 1451 (1479)
|||+||++|+++++|.++|+||||.|+|+|.|||||||||||||||||++ |+|||||||||+||.+||+.||++|++.|
T Consensus 1414 eI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~ 1493 (1560)
T PTZ00243 1414 EVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF 1493 (1560)
T ss_pred HHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999996 89999999999999999999999999999
Q ss_pred CCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1452 AACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1452 ~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
++||||+||||++|+++||||+|||+|+
T Consensus 1494 ~~~TvI~IAHRl~ti~~~DrIlVLd~G~ 1521 (1560)
T PTZ00243 1494 SAYTVITIAHRLHTVAQYDKIIVMDHGA 1521 (1560)
T ss_pred CCCEEEEEeccHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999996
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.6e-140 Score=1326.17 Aligned_cols=1066 Identities=22% Similarity=0.286 Sum_probs=800.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH
Q 000463 385 STHQFNFNSQKLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-----QLHAVWLMPLQISVA 459 (1479)
Q Consensus 385 ~~~~~~~~~~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-----~~~~~w~~plqi~la 459 (1479)
....|.+.+.|...|+|.....++.|+-. ...+.++.|++++-|+.|+++|++++. ++|.+-....-++++
T Consensus 91 q~~c~~~~geRq~~riR~~yl~~iLrQdi----~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~ 166 (1228)
T KOG0055|consen 91 QVSCWMRTGERQTARIRSKYLKAILRQDI----GWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIG 166 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcc----ceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788899999999888877766554 344455669999999999999999874 555555544455555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHH
Q 000463 460 LILLYNCLGASVITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRES 539 (1479)
Q Consensus 460 l~lL~~~lG~s~l~gl~~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~ 539 (1479)
++.-|+ -+++++.+..++.......++.+.+...+..++.-+--....|.+.+||++-.++-|+...+|-.+.
T Consensus 167 F~~~W~----Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~--- 239 (1228)
T KOG0055|consen 167 FYYGWK----LTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKA--- 239 (1228)
T ss_pred HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHH---
Confidence 555443 3455555555555666677777777777777777777789999999999999999999877765443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 540 EFGWLTKFMYSISGNIIVMWSTP------VLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAM 613 (1479)
Q Consensus 540 El~~l~k~~~~~a~~~~~~~~~p------~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~ 613 (1479)
++..+|+....++...+..... .....++||...+..+..+++.+|+++...-+-...|.+..+.+..+.+|+
T Consensus 240 -L~~~~k~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~ 318 (1228)
T KOG0055|consen 240 -LENALKFGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKAR 318 (1228)
T ss_pred -HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccc
Confidence 3333333333332222222222 222344566566666779999999988555555567888889999999999
Q ss_pred HHHHHHHHHhcccc-CcccccccccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHH
Q 000463 614 ISLARLDKYMLSRE-LVNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLAS 692 (1479)
Q Consensus 614 vS~~RI~~fL~~~e-~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ 692 (1479)
++..+|.+-++..+ .++...+.......++.|+++|+.|+|+.+++.++|+|+||+|++|+.+|+|||+||||||++++
T Consensus 319 ~aa~~I~~~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~L 398 (1228)
T KOG0055|consen 319 AAAYRIFETIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQL 398 (1228)
T ss_pred cchHHHHHHhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHH
Confidence 99999999987643 33332122222335678999999999998888899999999999999999999999999999999
Q ss_pred HhcCcccCCcEEEECC-------------eEEEEeccCcCCCCcHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccC
Q 000463 693 ILGEMHKISGKVKVCG-------------TTAYVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYG 758 (1479)
Q Consensus 693 llG~~~~~~G~i~~~g-------------~iayv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~g 758 (1479)
|.|.++|++|+|.++| ++|.|+|+|.+|++||+|||.||+|- ..+...++.+.....+.+..+|+|
T Consensus 399 L~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g 478 (1228)
T KOG0055|consen 399 LARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDG 478 (1228)
T ss_pred HHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHh
Confidence 9999999999999998 38999999999999999999999864 344455555555666778899999
Q ss_pred CccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEE
Q 000463 759 DQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLI 838 (1479)
Q Consensus 759 d~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i 838 (1479)
++|.+||+|.+|||||||||||||||.+||+||||||||||||+++.+.+ +++++.+.+|+|.|+|+|+++.+++||+|
T Consensus 479 ~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~V-q~ALd~~~~grTTivVaHRLStIrnaD~I 557 (1228)
T KOG0055|consen 479 YDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVV-QEALDKASKGRTTIVVAHRLSTIRNADKI 557 (1228)
T ss_pred hcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHH-HHHHHHhhcCCeEEEEeeehhhhhccCEE
Confidence 99999999999999999999999999999999999999999999987655 67888888999999999999999999999
Q ss_pred EEEeCCEEEEecChHHHHhcCcchHHHHHHhhhhhhhhhccccCC-CCCCCCCCCCC-ccccccccccCCCccccccccc
Q 000463 839 LVMREGMIVQSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMP-SGNSPKTPKSP-QITSNLQEANGENKSVEQSNSD 916 (1479)
Q Consensus 839 ~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 916 (1479)
++|++|+|++.|+++||++.++.|.++++.++......+.+.+.+ ..........+ ...+..+............+.+
T Consensus 558 ~v~~~G~IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~~~e 637 (1228)
T KOG0055|consen 558 AVMEEGKIVEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLSVKPEGE 637 (1228)
T ss_pred EEEECCEEEEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCcccccccccccccc
Confidence 999999999999999999999999999988754432211000000 00000000000 0000000000000000000000
Q ss_pred CCCchhhhHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhccc----cc-ccCCCCCCCcchhHH
Q 000463 917 KGNSKLIKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSY----ET-SEDHSMSFNPSLFIG 991 (1479)
Q Consensus 917 ~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~----~~-~~~~~~~~~~~~~~~ 991 (1479)
+..... .+++ -.+++....+|.+. .|+..++..++.++.........+.+++ .. ...+........|..
T Consensus 638 ~~~~~~-~~~~---~~~s~~~i~k~~~p--e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al 711 (1228)
T KOG0055|consen 638 DPEEPV-SEED---EKVSFWRIFKLNKP--EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWAL 711 (1228)
T ss_pred cccccc-cccc---ccccHHHHHHhccc--hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 000011 1111 22333333333332 3443333333333322222111111111 11 110111112345889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecc--cCchhhHHHHhchhhHhhhhhHHHHHHHH
Q 000463 992 VYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDT--TPSGRILSRASTDQTNIDLFLPFFVGITV 1069 (1479)
Q Consensus 992 vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~--~~~G~ilnR~s~D~~~id~~l~~~~~~~~ 1069 (1479)
+|.++++.+.++.+++.+++...|.+..+++|.++|+++++.+++|||. +. |+|.+|+++|...+...+...+..++
T Consensus 712 ~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv 790 (1228)
T KOG0055|consen 712 IFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVV 790 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999996 45 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHH---HHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcH
Q 000463 1070 AMYITLLGIFIITCQYAWPTIFLV---IPLAWANYWYRGYYLST-SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQ 1145 (1479)
Q Consensus 1070 ~~~~~~~~~~~v~~~~~~~~~~~~---ip~~~~~~~~~~~y~~~-~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~ 1145 (1479)
+.+..++..+++.++++|.+.+++ .|++.+..+.+.+++.. .++.+. ..........|++.+++||++|+.|
T Consensus 791 ~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~----~~~ea~~iA~eai~NIrTV~al~~e 866 (1228)
T KOG0055|consen 791 QNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKK----AYEEASKIAIEAVSNIRTVAALCAE 866 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH----HHHHHHHHHHHHHHhHHHHHHHhhH
Confidence 999999999999999999987665 56665555555554433 232222 2233446789999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHHHH----HHHhccCCcChhHHHHHHHHHHHHHHHHHH
Q 000463 1146 TTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLF----MILLPSSIIKPENVGLSLSYGLSLNGVLFW 1221 (1479)
Q Consensus 1146 ~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~----~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~ 1221 (1479)
++|.+.+.+.++...+..+.. ..|-++...+-..++++.-++. ..+...+.+++..+-..+.-...-...+..
T Consensus 867 ~~~~~~y~~~l~~p~~~~~~~---~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~ 943 (1228)
T KOG0055|consen 867 EKFMELYKEELEKPRKSSFKR---GLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQ 943 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888776655443 3355555555555444433322 234456666665543332222222233444
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCC-CcceeeeeEEEeCCcEEEE
Q 000463 1222 AIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNT-PLVLKGITLSIHGGEKIGV 1300 (1479)
Q Consensus 1222 ~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~-~~vL~~is~~I~~GekvgI 1300 (1479)
......++-+...|+.++.+..+-+++-+...+.. ....+.+|+|+|+||+|+||..+ .+||+|+|++|++||++|+
T Consensus 944 ~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~--~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvAL 1021 (1228)
T KOG0055|consen 944 ASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSG--GKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVAL 1021 (1228)
T ss_pred HHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCC--CccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEE
Confidence 55566778888899999999998766432111111 11123689999999999997442 3699999999999999999
Q ss_pred ECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCC-CCCCHHHHHHHHH
Q 000463 1301 VGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLE 1379 (1479)
Q Consensus 1301 VGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~ 1379 (1479)
||||||||||++.+|.|+|+|.+|.|.|||+||+++++++||++|++|.|||.||++||||||... .+.+.+||.+|++
T Consensus 1022 VG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak 1101 (1228)
T KOG0055|consen 1022 VGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAK 1101 (1228)
T ss_pred ECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999876 3579999999999
Q ss_pred HcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEE
Q 000463 1380 RCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISI 1459 (1479)
Q Consensus 1380 ~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~I 1459 (1479)
.+++|+||.++|+||||.|||+|.+||||||||||||||++||||||+||||||+||.++|+.+|++|++...+||+|+|
T Consensus 1102 ~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvI 1181 (1228)
T KOG0055|consen 1102 LANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVI 1181 (1228)
T ss_pred HhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChhhhhhcCEEEEEeCCC
Q 000463 1460 AHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1460 AHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||||+||++||.|.|+++|+
T Consensus 1182 AHRLSTIqnaD~I~Vi~~G~ 1201 (1228)
T KOG0055|consen 1182 AHRLSTIQNADVIAVLKNGK 1201 (1228)
T ss_pred ecchhhhhcCCEEEEEECCE
Confidence 99999999999999999996
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=5.6e-130 Score=1328.41 Aligned_cols=1151 Identities=18% Similarity=0.198 Sum_probs=824.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 319 RTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGM 398 (1479)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~ 398 (1479)
++...+.+++.++++.++.++..++..+.|+++..+++-+..++. . ..++..+++..++..++...+.+...+++.
T Consensus 51 ~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~-~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 126 (1466)
T PTZ00265 51 FKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGEN-V---NDIIFSLVLIGIFQFILSFISSFCMDVVTT 126 (1466)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334567777888888888888888999999999986632211 1 122233333344444444455556677888
Q ss_pred HHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000463 399 LIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGA-SVITTVV 476 (1479)
Q Consensus 399 riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~-s~l~gl~ 476 (1479)
++...+...+|+|.++++.........|++.|.++.|++.+.+++. .+..+....+.++.++++++. +.| -+++.++
T Consensus 127 ~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~-~sw~Lalv~l~ 205 (1466)
T PTZ00265 127 KILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLF-KNARLTLCITC 205 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHH
Confidence 8888888999999999998888888899999999999999988763 444445555555555544443 232 2333344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 477 GIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNII 556 (1479)
Q Consensus 477 ~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~ 556 (1479)
++.+++.+..++.++.++..++..+..++..+.+.|.++|||+||.|+-|+.+.++..+..+.-.+...+.....+....
T Consensus 206 ~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~ 285 (1466)
T PTZ00265 206 VFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIG 285 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444555566777788888888888889999999999999999999999999888876554444433333333333222
Q ss_pred HHHHHHH--HHHHHHHHHHHHhcC--------ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000463 557 VMWSTPV--LISTLTFATALLFGV--------PLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSR 626 (1479)
Q Consensus 557 ~~~~~p~--~v~~~tF~~~~l~~~--------~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~ 626 (1479)
+...... .+.+++|+.+....+ .++++.+++.+...-+...++..+...+..+..+.+|.+||.+.++.+
T Consensus 286 ~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~ 365 (1466)
T PTZ00265 286 MINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRK 365 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2222111 223445666665542 578888887665444444555666667889999999999999999865
Q ss_pred cCcccccccccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEE
Q 000463 627 ELVNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKV 706 (1479)
Q Consensus 627 e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~ 706 (1479)
+..+...+..... ....|+++|++|+|+..++.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+
T Consensus 366 ~~~~~~~~~~~~~-~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 444 (1466)
T PTZ00265 366 PLVENNDDGKKLK-DIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIII 444 (1466)
T ss_pred CCCCCCCCCccCC-CCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEE
Confidence 4322111111111 123699999999997544457999999999999999999999999999999999999999999999
Q ss_pred C-C-------------eEEEEeccCcCCCCcHHHHHhcCCCC--------------------------------------
Q 000463 707 C-G-------------TTAYVAQTSWIQNGTIEENILFGLPM-------------------------------------- 734 (1479)
Q Consensus 707 ~-g-------------~iayv~Q~~~i~~~Tv~enI~fg~~~-------------------------------------- 734 (1479)
+ | .+|||+|+|.++++||+|||.+|...
T Consensus 445 ~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (1466)
T PTZ00265 445 NDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLND 524 (1466)
T ss_pred eCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhh
Confidence 4 4 27999999999999999999997521
Q ss_pred --------------------ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEe
Q 000463 735 --------------------NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLD 794 (1479)
Q Consensus 735 --------------------~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLD 794 (1479)
+++...++++.+++.+.+..+|.|.+|.+|++|.+|||||||||+||||++++|+|+|||
T Consensus 525 ~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLD 604 (1466)
T PTZ00265 525 MSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILD 604 (1466)
T ss_pred cccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 112334455566778888899999999999999999999999999999999999999999
Q ss_pred CccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccccCCEEEEEeCC-----------------------------
Q 000463 795 DVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREG----------------------------- 844 (1479)
Q Consensus 795 ep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~~D~i~~l~~G----------------------------- 844 (1479)
||||+||+++++.+.+.+.+... +|+|+|+|||+++.+..||+|++|++|
T Consensus 605 EpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1466)
T PTZ00265 605 EATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKD 684 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccccccccccccc
Confidence 99999999999998766554433 589999999999999889999999986
Q ss_pred ------------------EEEEecChHHHHh-cCcchHHHHHHhhhhhhhhhcc--ccCCC--CCCCCCCC--C-Ccccc
Q 000463 845 ------------------MIVQSGRYNALLN-SGMDFGALVAAHETSMELVEVG--KTMPS--GNSPKTPK--S-PQITS 898 (1479)
Q Consensus 845 ------------------~i~~~g~~~~l~~-~~~~f~~l~~~~~~~~~~~~~~--~~~~~--~~~~~~~~--~-~~~~~ 898 (1479)
+|+++|+++|+++ .++.|..+++.+.......... +.... ....+... . .....
T Consensus 685 ~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (1466)
T PTZ00265 685 DNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYKDSERGYDPDEMN 764 (1466)
T ss_pred cccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcccccccccccccccccccccccccccccccccccc
Confidence 5999999999997 6889999987653221110000 00000 00000000 0 00000
Q ss_pred -c--cccccCC-Ccccccc-c--cc-CCCchhhhHHHH----hcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhh
Q 000463 899 -N--LQEANGE-NKSVEQS-N--SD-KGNSKLIKEEER----ETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLM 966 (1479)
Q Consensus 899 -~--~~~~~~~-~~~~~~~-~--~~-~~~~~l~~~e~~----~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~ 966 (1479)
. .+..... ....... . .+ ....+....++. ......+..+++++...... +++.+++.++..++..
T Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 842 (1466)
T PTZ00265 765 GNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKD--VTIIALSILVAGGLYP 842 (1466)
T ss_pred ccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 0 0000000 0000000 0 00 000000000000 00111222333343322221 2222222233333333
Q ss_pred hhhhhcccccccCCC---CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecc--c
Q 000463 967 AGDYWLSYETSEDHS---MSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDT--T 1041 (1479)
Q Consensus 967 ~~~~wl~~~~~~~~~---~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~--~ 1041 (1479)
..++.++.+.+.... .......|..++++++++..++.+++.++....+.+...+++.+++++++++|++|||+ +
T Consensus 843 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~ 922 (1466)
T PTZ00265 843 VFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKH 922 (1466)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCC
Confidence 333333333221000 01112346677777888888999999999999999999999999999999999999986 8
Q ss_pred CchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH--
Q 000463 1042 PSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLS--TSRELTRL-- 1117 (1479)
Q Consensus 1042 ~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~--~~r~l~rl-- 1117 (1479)
++|++++|+++|++.+...+...+..++..++.+++.++++++++|.+.++++|+.++.........+ ..++.++.
T Consensus 923 ~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1466)
T PTZ00265 923 APGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARLTANKDVEKKEI 1002 (1466)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 89999999999999999998888888888888999988999999998877766654433222111111 11111111
Q ss_pred -----------HHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHH
Q 000463 1118 -----------DSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFC 1186 (1479)
Q Consensus 1118 -----------~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~ 1186 (1479)
+....+.....+.|+++|++|||+|+.|+++.+++.+..+...+..........++....+++..+..+
T Consensus 1003 ~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1082 (1466)
T PTZ00265 1003 NQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINS 1082 (1466)
T ss_pred cccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122345567899999999999999999999999998888776665554433333333333333333332
Q ss_pred HHHHH-HHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCC-CCCCCC
Q 000463 1187 LATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLP-PPNWPA 1264 (1479)
Q Consensus 1187 ~~~~~-~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~-~~~wp~ 1264 (1479)
++.++ ..++..+.++.|.+...+.+.+.....+..+...+.+++....+.+|+.++++.+++.+........ ++..+.
T Consensus 1083 ~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~ 1162 (1466)
T PTZ00265 1083 FAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDI 1162 (1466)
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCC
Confidence 22222 3344567788877655554444333455667778888999999999999999876543211111111 001234
Q ss_pred CccEEEEeeeeeecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC----------------------
Q 000463 1265 HGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP---------------------- 1321 (1479)
Q Consensus 1265 ~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p---------------------- 1321 (1479)
.|.|+|+||+|+|+.+ ..+||+|+||+|+|||++||||+||||||||+++|.|+|+|
T Consensus 1163 ~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~ 1242 (1466)
T PTZ00265 1163 KGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDY 1242 (1466)
T ss_pred CceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccc
Confidence 6889999999999743 23699999999999999999999999999999999999999
Q ss_pred --------------------------------CccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCC-CC
Q 000463 1322 --------------------------------SGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQ 1368 (1479)
Q Consensus 1322 --------------------------------~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~ 1368 (1479)
++|+|+|||+||+++++++||++|++|||||+||+|||||||... ++
T Consensus 1243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~ 1322 (1466)
T PTZ00265 1243 QGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKED 1322 (1466)
T ss_pred ccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCC
Confidence 699999999999999999999999999999999999999999876 46
Q ss_pred CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHH
Q 000463 1369 YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIR 1448 (1479)
Q Consensus 1369 ~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~ 1448 (1479)
++|+||++|++.+++++||.++|+||||.|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|+++|+
T Consensus 1323 at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~ 1402 (1466)
T PTZ00265 1323 ATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIV 1402 (1466)
T ss_pred CCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHc--CCcEEEEEccChhhhhhcCEEEEEeC
Q 000463 1449 EEF--AACTIISIAHRIPTVMDCDRVIVVDA 1477 (1479)
Q Consensus 1449 ~~f--~~~TvI~IAHRl~ti~~~DrIlVL~~ 1477 (1479)
+.. +++|+|+||||++++++||+|+||++
T Consensus 1403 ~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~ 1433 (1466)
T PTZ00265 1403 DIKDKADKTIITIAHRIASIKRSDKIVVFNN 1433 (1466)
T ss_pred HHhccCCCEEEEEechHHHHHhCCEEEEEeC
Confidence 874 69999999999999999999999999
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1e-85 Score=792.28 Aligned_cols=539 Identities=21% Similarity=0.309 Sum_probs=451.8
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccC---CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 000463 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSED---HSMSFNPSLFIGVYGSTAVLSMVILVVRAYFV 1011 (1479)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~---~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~ 1011 (1479)
+...+.|.+... +.+...+++.++.....++.|+++...+|.- .+..........+..++.++++++..+|.+++
T Consensus 135 ~~rl~~l~~~~~--~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~ 212 (716)
T KOG0058|consen 135 LKRLLGLLKPEW--KWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLL 212 (716)
T ss_pred HHHHHHHhchhH--HHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556665432 2233333334444555666666665433321 11111223456667778888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000463 1012 THVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIF 1091 (1479)
Q Consensus 1012 ~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 1091 (1479)
.+.+.+...+++..+|++++++.++|||.+.+|++++|+++|...+-..++..+...+.+.++.++.+++|+..+|.+..
T Consensus 213 ~~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltl 292 (716)
T KOG0058|consen 213 QYAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTL 292 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhH
Q 000463 1092 LVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNE 1171 (1479)
Q Consensus 1092 ~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1171 (1479)
+.+..+++...+.++|-+..|++.+..+++-+.......|.+.+++|||+|+.|+.-.++|.+.++...+.......+.-
T Consensus 293 v~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~ 372 (716)
T KOG0058|consen 293 VTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYG 372 (716)
T ss_pred HHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 66555555555666666666777777777888888999999999999999999999888888888776665543333332
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchh
Q 000463 1172 WLGFRLELLGSFTFCLA-TLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAA 1250 (1479)
Q Consensus 1172 wl~~~l~~l~~~~~~~~-~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~ 1250 (1479)
-+.-..++.+......+ .....+...+.+++|.+--.+.|...+...+.++...+.++-+.+.|.+|+.||++.+|.-+
T Consensus 373 ~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~ 452 (716)
T KOG0058|consen 373 IFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIP 452 (716)
T ss_pred HhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCC
Confidence 22233344444333322 22344556788999999999999999999999999999999999999999999999876544
Q ss_pred ccccCCCCCCCCCCCccEEEEeeeeeecCCC-CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEc
Q 000463 1251 WKMEDRLPPPNWPAHGNVDLIDLQVRYRSNT-PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIID 1329 (1479)
Q Consensus 1251 ~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~-~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~ID 1329 (1479)
.. .. ..|. ..+|.|+|+||+|.||... .+||||+||+|+|||+||+|||||+||||++++|.|+|+|++|+|++|
T Consensus 453 ~~--G~-~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllD 528 (716)
T KOG0058|consen 453 LT--GT-LAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLD 528 (716)
T ss_pred CC--Cc-cccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEEC
Confidence 32 11 1222 4689999999999997552 369999999999999999999999999999999999999999999999
Q ss_pred CEecCCCChhhhhcceEEEcCccccccccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCch
Q 000463 1330 GIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVG 1408 (1479)
Q Consensus 1330 G~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1408 (1479)
|+||++++.+.||++||+|.|||+||+|||||||... .+.+||||.+|+++++.|+||.++|+||||.|||.|..||||
T Consensus 529 G~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGG 608 (716)
T KOG0058|consen 529 GVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGG 608 (716)
T ss_pred CeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccch
Confidence 9999999999999999999999999999999999753 378999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1409 QRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1409 QrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||||||||||+|||+|||||||||+||.++|..||++|.+..+++|||+|||||+||+++|+|+|+|+|+
T Consensus 609 QKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~ 679 (716)
T KOG0058|consen 609 QKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGR 679 (716)
T ss_pred HHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999996
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.5e-79 Score=772.67 Aligned_cols=539 Identities=25% Similarity=0.368 Sum_probs=468.8
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCC-CCCCCc-chhHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFNP-SLFIGVYGSTAVLSMVILVVRAYFVT 1012 (1479)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~~-~~~~~vy~~l~~~~~~~~~~~~~~~~ 1012 (1479)
+..++.++.. .+....-+++..++.+++.+++++.....+|... ....+. .....++++++++..++.++|.+++.
T Consensus 142 ~~~f~~~~~~--~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~ 219 (709)
T COG2274 142 LSWFIPLLFK--YRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIA 219 (709)
T ss_pred hHhHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444432 2334455667778888899999999887776521 111122 23344556667888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000463 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1479)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1092 (1479)
+.+.+....+-.++++|+++.|++||+++++|++++|++ |.+.|..++...+...+...+..+..+++|++++|+++++
T Consensus 220 ~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li 298 (709)
T COG2274 220 HLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLI 298 (709)
T ss_pred HHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999996 7888888888888887777788888889999999998887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHH
Q 000463 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1479)
Q Consensus 1093 ~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1479)
.+..++++..+.-...+..|+..+......+...++..|++.|+.|||+.+.|+++..+..+..++..+..+.......|
T Consensus 299 ~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~ 378 (709)
T COG2274 299 VLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALI 378 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 76666666555555555556666666666777889999999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhc
Q 000463 1173 LGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1479)
Q Consensus 1173 l~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~ 1251 (1479)
......++..+...++.++ +..+..+.++.|.+-...+.+-.+++++..++..+.+++....+.+|+.+..+.|+|.+.
T Consensus 379 ~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~ 458 (709)
T COG2274 379 LNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEG 458 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 8888888877766555555 445567788888888888888899999999999999999999999999999999988642
Q ss_pred cccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCE
Q 000463 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI 1331 (1479)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~ 1331 (1479)
+..+...|+.+|+|+|+||+|+|+++.|++|+|+|++|+|||+|||||+||||||||+++|.|+|+|++|+|++||+
T Consensus 459 ---~~~~~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~ 535 (709)
T COG2274 459 ---DKTLIHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGV 535 (709)
T ss_pred ---ccccccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 22244556788999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcceEEEcCccccccccHhhhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1332 DISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1332 dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
|++++++++||++|++||||++||+|||||||...+ +.+||||++|++.+|++++|.++|.||||+|||+|.|||||||
T Consensus 536 dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQr 615 (709)
T COG2274 536 DLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQR 615 (709)
T ss_pred eHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHH
Confidence 999999999999999999999999999999998654 6789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||+|||||+++|+|||||||||+||++||+.|++.|.+...+||+|+||||++|+++||||+|||+||
T Consensus 616 QrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gk 684 (709)
T COG2274 616 QRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGK 684 (709)
T ss_pred HHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999996
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=7.3e-75 Score=737.84 Aligned_cols=521 Identities=26% Similarity=0.387 Sum_probs=425.1
Q ss_pred HHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000463 953 AVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILH 1032 (1479)
Q Consensus 953 ~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~ 1032 (1479)
+..++.++........++++....+...........+...++++.++..++.++..++..+.+.+....++.++++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~ 97 (567)
T COG1132 18 LAILLLLLSALLSLLLPLLIGRIIDALLADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLR 97 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444445556666666666644432110011122344445555566777777777888888899999999999999999
Q ss_pred CCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1033 APMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSR 1112 (1479)
Q Consensus 1033 ~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r 1112 (1479)
.|+++|+++++|++++|+++|++.++..+......+....+.+++.+++++..+|.+.++++...+++......+.+..+
T Consensus 98 ~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~ 177 (567)
T COG1132 98 LPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSR 177 (567)
T ss_pred CCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888666666778888888899999998877665555555555555555557
Q ss_pred HHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHHHH-
Q 000463 1113 ELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLF- 1191 (1479)
Q Consensus 1113 ~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~- 1191 (1479)
+..+......+.+.+.+.|+++|+++||+|+.++...+++.+..+...+...........+.....++..+........
T Consensus 178 ~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (567)
T COG1132 178 KLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALG 257 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777788999999999999999999999999776666665555544443333333333323333333332222222
Q ss_pred HHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEE
Q 000463 1192 MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLI 1271 (1479)
Q Consensus 1192 ~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~ 1271 (1479)
......+.++.|.+...+.|...+..++..+......++....+.||+.++.+.+++.... . .+..+..|+|+|+
T Consensus 258 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~---~--~~~~~~~~~I~f~ 332 (567)
T COG1132 258 GFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDP---P--DPLKDTIGSIEFE 332 (567)
T ss_pred HHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC---C--CCCCCCCCeEEEE
Confidence 2233456688899999999999999999999999999999999999999999876552211 1 1134566889999
Q ss_pred eeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCc
Q 000463 1272 DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQE 1351 (1479)
Q Consensus 1272 nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQd 1351 (1479)
||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||+++++.+||++|++||||
T Consensus 333 ~vsf~y~~~-~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd 411 (567)
T COG1132 333 NVSFSYPGK-KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQD 411 (567)
T ss_pred EEEEEcCCC-CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEccc
Confidence 999999863 4699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccHhhhcCCCCC-CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeC
Q 000463 1352 PVLFEGTVRSNIDPIGQ-YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDE 1430 (1479)
Q Consensus 1352 p~LF~gTIR~NLdp~~~-~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDE 1430 (1479)
|+||+||||+||++..+ ++|||+++|+++++++|+|.++|+||||.|||+|.+||||||||||||||++|+|+||||||
T Consensus 412 ~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILDE 491 (567)
T COG1132 412 PLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILDE 491 (567)
T ss_pred ceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEec
Confidence 99999999999998864 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1431 ATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1431 aTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||++|++||+.||++|++..+++|+|+||||++|+++||+|+|||+|+
T Consensus 492 aTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~ 540 (567)
T COG1132 492 ATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGR 540 (567)
T ss_pred cccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCE
Confidence 9999999999999999998888999999999999999999999999996
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.1e-73 Score=731.04 Aligned_cols=537 Identities=18% Similarity=0.222 Sum_probs=420.6
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCC--CCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 936 HVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH--SMSFN-PSLFIGVYGSTAVLSMVILVVRAYFVT 1012 (1479)
Q Consensus 936 ~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~--~~~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~ 1012 (1479)
+.++.|++..+++ +.+.+++.++..++....++.+....+... ..... ...++.+++++.++..++.+++.++..
T Consensus 11 ~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK11174 11 RWLKQQSKPAKRW--LNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGF 88 (588)
T ss_pred HHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566554333 233444445555566666666555443211 11111 122344455556677778888888999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000463 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1479)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1092 (1479)
..+.+....++.++++++++.|++||++.++|++++|+++|++.++..+...+..++..++.+++.+++++.++|.+.++
T Consensus 89 ~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 168 (588)
T PRK11174 89 KAGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLI 168 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888888888888888888888999987766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHH
Q 000463 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1479)
Q Consensus 1093 ~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1479)
++..+++..++...+.+..++..+......+.+.+++.|+++|+.+||+|++|+++.+++.+..++..+..........+
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (588)
T PRK11174 169 LLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFL 248 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444444444445555555555666666788899999999999999999999999998887777766655444433333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCcChhHH----H-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Q 000463 1173 LGFRLELLGSFTFCLATLFMILLPSSIIKPENV----G-----LSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFT 1243 (1479)
Q Consensus 1173 l~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~v----g-----l~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~ 1243 (1479)
......++..+...+..++......+.++.|.+ + +.+.+...+..++..+...+..+.....+.+|+.++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l 328 (588)
T PRK11174 249 SSAVLEFFASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFL 328 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333332222211111111244454432 1 1123445667778888888889999999999999999
Q ss_pred cCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCc
Q 000463 1244 EIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSG 1323 (1479)
Q Consensus 1244 ~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~ 1323 (1479)
+.|++.+.. ...+ ...+..+.|+|+||+|.|.++ +++|+|+||+|+|||++||||+||||||||+++|.|+| |++
T Consensus 329 ~~~~~~~~~--~~~~-~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~ 403 (588)
T PRK11174 329 ETPLAHPQQ--GEKE-LASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQ 403 (588)
T ss_pred cCCCcccCC--Cccc-cCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCC
Confidence 876543211 1101 111234679999999988655 56999999999999999999999999999999999999 999
Q ss_pred cEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCC
Q 000463 1324 GRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSG 1402 (1479)
Q Consensus 1324 G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1402 (1479)
|+|++||+|+++++.+++|++|++|||||+||+|||||||... ++++|||+++|++.|+++++|+++|+||||.|||+|
T Consensus 404 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 404 GSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred cEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 9999999999999999999999999999999999999999876 469999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1403 DNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1403 ~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
.||||||||||+||||++++|+|||||||||+||.+|++.|++.|++..+++|+|+||||++++.+||+|+||++|+
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQ 560 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCe
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999995
No 13
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.7e-73 Score=739.52 Aligned_cols=535 Identities=21% Similarity=0.277 Sum_probs=434.4
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCC-CCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 937 VYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFN-PSLFIGVYGSTAVLSMVILVVRAYFVTHV 1014 (1479)
Q Consensus 937 ~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~~~ 1014 (1479)
.+++|++.. +..+...+++.++..++.+..+++.....|.-. ....+ ....+..++++.++..++.+++.++....
T Consensus 151 ~l~~~~~~~--~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 228 (711)
T TIGR00958 151 RLLGLSGRD--WPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYT 228 (711)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555433 223344455556667777777777765554311 11111 11234455566667778888899999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000463 1015 GLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVI 1094 (1479)
Q Consensus 1015 ~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i 1094 (1479)
+.+...+++.++++++++.|++||+++++|+++||+++|++.++..+...+..++..++.+++.+++++..+|++.++++
T Consensus 229 ~~~~~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l 308 (711)
T TIGR00958 229 MARINLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTL 308 (711)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999877655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHH
Q 000463 1095 PLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLG 1174 (1479)
Q Consensus 1095 p~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~ 1174 (1479)
..+++..++...+.+..++..+......+...+++.|+++|+.+||+|+.|+++.+++.+..++..+.............
T Consensus 309 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (711)
T TIGR00958 309 INLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYL 388 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555555555555555555566677788999999999999999999999988888888776655443322222221
Q ss_pred HHHHHHHHHHHHH-HHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccc
Q 000463 1175 FRLELLGSFTFCL-ATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKM 1253 (1479)
Q Consensus 1175 ~~l~~l~~~~~~~-~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~ 1253 (1479)
....++..+...+ ..+.......+.++.|.+...+.|...+..++..+...+.++++...+.+|+.++.+.+++.+..
T Consensus 389 ~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~- 467 (711)
T TIGR00958 389 WTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLT- 467 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-
Confidence 1122222221111 11222334568899999999999999999999999999999999999999999999876653211
Q ss_pred cCCCCCCCCCCCccEEEEeeeeeecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEe
Q 000463 1254 EDRLPPPNWPAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGID 1332 (1479)
Q Consensus 1254 ~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~d 1332 (1479)
. ....++..|.|+|+||+|+|+.+ .+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|
T Consensus 468 -~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~ 544 (711)
T TIGR00958 468 -G--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVP 544 (711)
T ss_pred -C--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEE
Confidence 1 11123456889999999999753 3579999999999999999999999999999999999999999999999999
Q ss_pred cCCCChhhhhcceEEEcCccccccccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1333 ISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1333 I~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
+++++.+++|++|++|||||.+|+|||||||... ++.+||++++|+++++++++++++|+||||.+||+|.+|||||||
T Consensus 545 i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQ 624 (711)
T TIGR00958 545 LVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQ 624 (711)
T ss_pred HHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHH
Confidence 9999999999999999999999999999999865 468899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||+||||++++|+|||||||||+||++||+.|++ ....+++|+|+||||++++.+||+|+||++|+
T Consensus 625 RlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ 690 (711)
T TIGR00958 625 RIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGS 690 (711)
T ss_pred HHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999 34458999999999999999999999999995
No 14
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=7.8e-73 Score=734.07 Aligned_cols=521 Identities=21% Similarity=0.256 Sum_probs=430.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccccCC-CCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 951 VVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFN-PSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILR 1028 (1479)
Q Consensus 951 ~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~ 1028 (1479)
+..++++.++..++.++.++.+....|... ....+ ...+..+++++.++..++.+++.++....+.+...+++.++++
T Consensus 138 ~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (686)
T TIGR03797 138 LLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWD 217 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566666777777776665554311 11111 1223445556667778888999999999999999999999999
Q ss_pred HHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1029 SILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYL 1108 (1479)
Q Consensus 1029 ~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~ 1108 (1479)
++++.|++||++.++|++++|++ |++.++..+...+...+...+.+++.+++++.++|++.++++..+++++.+.....
T Consensus 218 ~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~ 296 (686)
T TIGR03797 218 RLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLG 296 (686)
T ss_pred HHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999997 78888888777666666666666777788888898877665554444444443444
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 000463 1109 STSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLA 1188 (1479)
Q Consensus 1109 ~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~ 1188 (1479)
+..+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..++..+..+.......|......++..+...++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i 376 (686)
T TIGR03797 297 LLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAAL 376 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43344444444556678899999999999999999999999998888888887777776666676666655554433333
Q ss_pred HHH-HHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCcc
Q 000463 1189 TLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGN 1267 (1479)
Q Consensus 1189 ~~~-~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~ 1267 (1479)
.++ ......+.++.|.+-....+...+..++..+...+..++....+.+|+.++.+.|+|.+. .... ..+..|.
T Consensus 377 l~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~---~~~~--~~~~~~~ 451 (686)
T TIGR03797 377 FAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDE---AKTD--PGKLSGA 451 (686)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc---CcCC--CCCCCce
Confidence 332 333456788888888888888889999999999999999999999999999987766431 1111 1234578
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|++
T Consensus 452 I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~ 531 (686)
T TIGR03797 452 IEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGV 531 (686)
T ss_pred EEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEE
Confidence 99999999998666779999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEE
Q 000463 1348 IPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1479)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILi 1427 (1479)
|||||.+|+|||||||...+.++|+|+++|++.++++++++++|+||||++||+|.||||||||||+||||++++|+|||
T Consensus 532 v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLi 611 (686)
T TIGR03797 532 VLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILL 611 (686)
T ss_pred EccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999998776689999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1428 MDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1428 LDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||||||+||++||+.|++.|++. ++|+|+||||++++.+||||+|||+|+
T Consensus 612 LDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~ 661 (686)
T TIGR03797 612 FDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGR 661 (686)
T ss_pred EeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCE
Confidence 99999999999999999999986 699999999999999999999999995
No 15
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.1e-72 Score=736.13 Aligned_cols=540 Identities=22% Similarity=0.289 Sum_probs=442.1
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCC-CCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFN-PSLFIGVYGSTAVLSMVILVVRAYFVT 1012 (1479)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~ 1012 (1479)
++.++.+++..++ ....++++.++.+++.++.++.+....|... ....+ ...+...++++.++..++.+++.++..
T Consensus 142 ~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (710)
T TIGR03796 142 LRALWRRLRGSRG--ALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLR 219 (710)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566654332 2233444555666666777777765554311 11111 122344455566677888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000463 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1479)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1092 (1479)
..+.+....++.++++++++.|++||++.++|++++|++.| ..+...+...+...+..++.+++.+++++.++|++.++
T Consensus 220 ~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 298 (710)
T TIGR03796 220 RLQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLI 298 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988 56777777777777777888888888889999988777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHH
Q 000463 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1479)
Q Consensus 1093 ~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1479)
++..++++.++..++.+..++..+......+...+++.|+++|+.+||+++.|+.+.+++.+..+...+..........|
T Consensus 299 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (710)
T TIGR03796 299 GIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQI 378 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66665555555555555555555556666778899999999999999999999999998888777777666655555555
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhc
Q 000463 1173 LGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1479)
Q Consensus 1173 l~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~ 1251 (1479)
......++..+...++.++ ......+.++.|.+.....+...+..++..+...+..+.....+.+|+.++.+.|+|.+.
T Consensus 379 ~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 458 (710)
T TIGR03796 379 LGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLL 458 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 5555555544433333222 334456889999988888899999999999999999999999999999999988776432
Q ss_pred cccC--C-CCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEE
Q 000463 1252 KMED--R-LPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIII 1328 (1479)
Q Consensus 1252 ~~~~--~-~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~I 1328 (1479)
.... . ...+.++..|.|+++||+|+|+++.+++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|++
T Consensus 459 ~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~i 538 (710)
T TIGR03796 459 EEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILF 538 (710)
T ss_pred ccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 1100 0 011113456899999999999876677999999999999999999999999999999999999999999999
Q ss_pred cCEecCCCChhhhhcceEEEcCccccccccHhhhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCc
Q 000463 1329 DGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSV 1407 (1479)
Q Consensus 1329 DG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1407 (1479)
||+|+++++.+++|++|++|||||.+|+|||||||..++ +++|+++++|++.+++++++.++|+||||.++|+|.||||
T Consensus 539 dg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSG 618 (710)
T TIGR03796 539 DGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSG 618 (710)
T ss_pred CCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCH
Confidence 999999999999999999999999999999999998764 6899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1408 GQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1408 GQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||||||+||||++++|+|||||||||+||++||+.|.+.|++ .++|+|+||||++++.+||||+|||+|+
T Consensus 619 GQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~ 688 (710)
T TIGR03796 619 GQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGK 688 (710)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999987 5899999999999999999999999996
No 16
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.3e-72 Score=734.57 Aligned_cols=536 Identities=20% Similarity=0.241 Sum_probs=432.2
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCc---chhHHHHHHHHHHHHHHHHHHHHHH
Q 000463 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNP---SLFIGVYGSTAVLSMVILVVRAYFV 1011 (1479)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~---~~~~~vy~~l~~~~~~~~~~~~~~~ 1011 (1479)
+..++.|++..+++ +..++++.++..++.++.++++....|... +.... ..+...++++.++..++.+++.++.
T Consensus 144 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (708)
T TIGR01193 144 LLKFIPLITRQKKL--IVNIVIAAIIVTLISIAGSYYLQKIIDTYI-PHKMMGTLGIISIGLIIAYIIQQILSYIQIFLL 220 (708)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666543332 334455566667777778888877665311 11111 1223344455566778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000463 1012 THVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIF 1091 (1479)
Q Consensus 1012 ~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 1091 (1479)
...+.+...+++.++++++++.|++||+++++|++++|++ |.+.+...+...+...+...+.+++.++++++++|++.+
T Consensus 221 ~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 299 (708)
T TIGR01193 221 NVLGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFL 299 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999999999999999999998 777777666555555555666666677778888888776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhH
Q 000463 1092 LVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNE 1171 (1479)
Q Consensus 1092 ~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1171 (1479)
+++..++++..+...+.+..++..+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..+.......
T Consensus 300 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (708)
T TIGR01193 300 LSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQ 379 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555555555555555556666666666778888999999999999999999999988887777766665554443333
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchh
Q 000463 1172 WLGFRLELLGSFTFCL-ATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAA 1250 (1479)
Q Consensus 1172 wl~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~ 1250 (1479)
+......++..+...+ ..+.......+.++.|.+.....+...+..++..+...+..++....+++|+.++.+.|+|.+
T Consensus 380 ~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 459 (708)
T TIGR01193 380 GQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFI 459 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 3332223332222221 222233345788999998888889999999999999999999999999999999998877643
Q ss_pred ccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcC
Q 000463 1251 WKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDG 1330 (1479)
Q Consensus 1251 ~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG 1330 (1479)
.. ....+.++..|.|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|+|||
T Consensus 460 ~~---~~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg 535 (708)
T TIGR01193 460 NK---KKRTELNNLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNG 535 (708)
T ss_pred cc---ccccCCCCCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECC
Confidence 21 1111234457899999999999744 5699999999999999999999999999999999999999999999999
Q ss_pred EecCCCChhhhhcceEEEcCccccccccHhhhcCCC--CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCch
Q 000463 1331 IDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI--GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVG 1408 (1479)
Q Consensus 1331 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~--~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1408 (1479)
+|+++++++++|++|++|||||.||+|||||||... ++++|+++++|++.+++++++.++|+||||.++|+|.+||||
T Consensus 536 ~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgG 615 (708)
T TIGR01193 536 FSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGG 615 (708)
T ss_pred EEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHH
Confidence 999999999999999999999999999999999876 468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1409 QRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1409 QrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||||+||||++++|+|||||||||+||++||+.|++.|++. +++|+|+||||++++..||||+||++|+
T Consensus 616 QrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~ 685 (708)
T TIGR01193 616 QKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGK 685 (708)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCE
Confidence 999999999999999999999999999999999999999974 7899999999999999999999999996
No 17
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.3e-72 Score=714.91 Aligned_cols=521 Identities=24% Similarity=0.358 Sum_probs=419.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccccccCCC-CCCCcch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 952 VAVLLLSVAWQGSLMAGDYWLSYETSEDHS-MSFNPSL---FIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQIL 1027 (1479)
Q Consensus 952 ~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~-~~~~~~~---~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll 1027 (1479)
...+++.++...+.+..++++....+.... ....... ++.+++++.++..++.+++.++....+.+...+++.+++
T Consensus 26 ~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~ 105 (592)
T PRK10790 26 GLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVM 105 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455566666777777777665543111 1111111 122344444566677778888888999999999999999
Q ss_pred HHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000463 1028 RSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYY 1107 (1479)
Q Consensus 1028 ~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y 1107 (1479)
++++++|+++|++.+.|++++|+++|++.++..+...+..++..++.+++.++++++.+|++.++++..+++...+...+
T Consensus 106 ~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~ 185 (592)
T PRK10790 106 DAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIY 185 (592)
T ss_pred HHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888888888888888888888888887654432222222222333
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHH-HHHHHHHHHHHHH
Q 000463 1108 LSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWL-GFRLELLGSFTFC 1186 (1479)
Q Consensus 1108 ~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl-~~~l~~l~~~~~~ 1186 (1479)
....+...+......+...+++.|+++|+.+||+|+.++++.+++.+..+...+..........+. .....++..+...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (592)
T PRK10790 186 QRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILC 265 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444556778899999999999999999999998888877666555544333322221 2222233222211
Q ss_pred HHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCc
Q 000463 1187 LATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHG 1266 (1479)
Q Consensus 1187 ~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g 1266 (1479)
+..+.......+.++.|.+...+.|...+..++..+...+..+++...+.+|+.++.+.+++... . ...++..+
T Consensus 266 ~~~~~~~~~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~---~---~~~~~~~~ 339 (592)
T PRK10790 266 GLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG---N---DDRPLQSG 339 (592)
T ss_pred HHHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC---C---CccCCCCC
Confidence 11111112346778888888888899999999999999999999999999999999886654221 1 11223457
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|++||.|+++++++++|++|+
T Consensus 340 ~i~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~ 418 (592)
T PRK10790 340 RIDIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVA 418 (592)
T ss_pred eEEEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheE
Confidence 89999999999754 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEE
Q 000463 1347 IIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLL 1426 (1479)
Q Consensus 1347 iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1426 (1479)
+|||||.+|+||||+||.++++++|+++++|++++|++++++++|+||||.++|+|.+|||||||||+|||||+++|+||
T Consensus 419 ~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~il 498 (592)
T PRK10790 419 MVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQIL 498 (592)
T ss_pred EEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999988889999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1427 FMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1427 iLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+
T Consensus 499 llDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 499 ILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQ 551 (592)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCE
Confidence 99999999999999999999999988999999999999999999999999996
No 18
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=4.9e-72 Score=727.49 Aligned_cols=538 Identities=20% Similarity=0.280 Sum_probs=434.9
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCC-CCCCCc-chhHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFNP-SLFIGVYGSTAVLSMVILVVRAYFVT 1012 (1479)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~~-~~~~~vy~~l~~~~~~~~~~~~~~~~ 1012 (1479)
+..++.+++..++ .+..++++.++.+++..+.++.+....|... ....+. ..+..+++++.++..++.+++.++..
T Consensus 135 ~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (694)
T TIGR03375 135 KHWFWSTLKESWP--LYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLD 212 (694)
T ss_pred chHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555554332 2334455556666667777777765554311 111111 12233344455667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000463 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1479)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1092 (1479)
..+.+....++.++++++++.|++| ++.++|++++|+ +|++.+...+...+...+...+.++..++++++++|++.++
T Consensus 213 ~~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 290 (694)
T TIGR03375 213 VAGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999998 789999999999 79999998887777666666666777777888888887766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHH
Q 000463 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1479)
Q Consensus 1093 ~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1479)
.+..+++++.+..++.+..++..+......+...+++.|+++|+.+||+|+.|+.+.+++.+..++..+..+.......+
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444444444445555555555555667788899999999999999999999999998888877766666555544444
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhc
Q 000463 1173 LGFRLELLGSFTFCLAT-LFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1479)
Q Consensus 1173 l~~~l~~l~~~~~~~~~-~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~ 1251 (1479)
......++..+...+.. +....+..+.++.|.+-..++|...+..++..+...+..++....+.+|+.++.+.|+|.+.
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 44444444333222222 22333456789999888888899999999999999999999999999999999988776432
Q ss_pred cccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCE
Q 000463 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI 1331 (1479)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~ 1331 (1479)
. .......+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+
T Consensus 451 ~---~~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~ 527 (694)
T TIGR03375 451 G---TRFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGV 527 (694)
T ss_pred C---CCCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 1 1111112346789999999999866667999999999999999999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcceEEEcCccccccccHhhhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1332 DISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1332 dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
|+++++++++|++|++|||||++|+|||||||...+ +++|+|+++|++.+++++++.++|+||||.+||+|.|||||||
T Consensus 528 ~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQr 607 (694)
T TIGR03375 528 DIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQR 607 (694)
T ss_pred EhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHH
Confidence 999999999999999999999999999999998765 5899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||+||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++.+||||+||++|+
T Consensus 608 QRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~ 676 (694)
T TIGR03375 608 QAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGR 676 (694)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999989999999999999999999999999995
No 19
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=4.5e-72 Score=707.41 Aligned_cols=508 Identities=19% Similarity=0.241 Sum_probs=406.6
Q ss_pred HHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 953 AVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGV--YGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSI 1030 (1479)
Q Consensus 953 ~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v--y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~i 1030 (1479)
+.+++.++..++.++.++.+++..+...........+..+ ++++.++..++.+++.++....+.+...+++.++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l 96 (529)
T TIGR02868 17 VAILLGALALGSAVALLGVSAWLISRAAEMPPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRL 96 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444445555666666666665554211111111111111 12234556667777888888889999999999999999
Q ss_pred hcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHHHHHH
Q 000463 1031 LHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYW-YRGYYLS 1109 (1479)
Q Consensus 1031 l~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~-~~~~y~~ 1109 (1479)
++.|.+||++.++|++++|+++|++.++..+...+..++..++.+++.++++++.+|.+.++++..++++.+ ...++.+
T Consensus 97 l~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~ 176 (529)
T TIGR02868 97 ARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLR 176 (529)
T ss_pred hccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998888888888888888888999999887766544433333 3333444
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHH
Q 000463 1110 TSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLAT 1189 (1479)
Q Consensus 1110 ~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~ 1189 (1479)
..++..+......+.+.+++.|+++|+++||+|+.|+.+.+++.+..+...+..........+......++..+...++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (529)
T TIGR02868 177 AARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGAL 256 (529)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555556678899999999999999999999999998888877776666555444444433333333333222222
Q ss_pred HH-HHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccE
Q 000463 1190 LF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNV 1268 (1479)
Q Consensus 1190 ~~-~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I 1268 (1479)
++ ......+.++.|.+...+.|...+..++..+......+.....+.+|+.++.+.++|.+.. +...+...+|..+.|
T Consensus 257 ~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-~~~~~~~~~~~~~~I 335 (529)
T TIGR02868 257 WAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEG-VVPAAGALGLGKPTL 335 (529)
T ss_pred HHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCC-CCCCCcccCCCCceE
Confidence 22 2334467788888888888888899999999999999999999999999999877653221 111111123456789
Q ss_pred EEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEE
Q 000463 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGII 1348 (1479)
Q Consensus 1269 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iI 1348 (1479)
+|+||+|+|+++. ++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|++++ .+++|++|++|
T Consensus 336 ~~~~vsf~Y~~~~-~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~V 413 (529)
T TIGR02868 336 ELRDLSFGYPGSP-PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISVF 413 (529)
T ss_pred EEEEEEEecCCCC-ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEEE
Confidence 9999999997654 599999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred cCccccccccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEE
Q 000463 1349 PQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1479)
Q Consensus 1349 pQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILi 1427 (1479)
||||+||+|||||||... ++++|||+++|+++++++++|.++|+||||.|||+|.|||||||||||||||++++|+|||
T Consensus 414 ~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~ili 493 (529)
T TIGR02868 414 AQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPILL 493 (529)
T ss_pred ccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999999999999875 4689999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccCh
Q 000463 1428 MDEATASVDSQTDAEIQRIIREEFAACTIISIAHRI 1463 (1479)
Q Consensus 1428 LDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl 1463 (1479)
||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 494 LDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 494 LDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 999999999999999999999988999999999996
No 20
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=8.3e-71 Score=704.12 Aligned_cols=482 Identities=22% Similarity=0.316 Sum_probs=417.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHH
Q 000463 993 YGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMY 1072 (1479)
Q Consensus 993 y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~ 1072 (1479)
++++.++..++.+++.++....+.+....++..+++++++.|.++|++.+.|++++|+++|++.+...+...+..++...
T Consensus 71 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~ 150 (582)
T PRK11176 71 VIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREG 150 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456667777788888888889999999999999999999999999999999999999999999998888888888888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHH
Q 000463 1073 ITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQEN 1152 (1479)
Q Consensus 1073 ~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~ 1152 (1479)
+.+++.+++++.++|++.++++..+++..++.....+..++..+......+...+++.|.++|+.+||+|+.++.+.+++
T Consensus 151 ~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~ 230 (582)
T PRK11176 151 ASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRF 230 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHH
Confidence 88888888888899887766555545544444444444455555555667788899999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHHHH-HHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1153 VNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVEN 1231 (1479)
Q Consensus 1153 ~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~ 1231 (1479)
.+..+...+..........+.....+++..+...++.++ ......+.++.|.+.+.+++...+..++..+...+..++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~ 310 (582)
T PRK11176 231 DKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQR 310 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888777776666666666666666555443333222 3334567899999988999999999999999999999999
Q ss_pred HhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHH
Q 000463 1232 RMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTL 1311 (1479)
Q Consensus 1232 ~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTL 1311 (1479)
...+.+|+.++.+.++|.+. +. ....|..+.|+++||+|+|+++.+++|+|+||+|+|||++||||+||||||||
T Consensus 311 ~~~~~~ri~~~~~~~~~~~~---~~--~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTL 385 (582)
T PRK11176 311 GMAACQTLFAILDLEQEKDE---GK--RVIERAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTI 385 (582)
T ss_pred HHHHHHHHHHHhcCCCcCCC---CC--cCCCCCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHH
Confidence 99999999999987655321 11 11123456899999999998766679999999999999999999999999999
Q ss_pred HHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCC--CCCCHHHHHHHHHHcCchHHHHh
Q 000463 1312 IQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI--GQYSDEEIWKSLERCQLKDVVAA 1389 (1479)
Q Consensus 1312 l~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~--~~~sd~eI~~aL~~~~L~~~i~~ 1389 (1479)
+++|+|+++|++|+|++||+|+++++.+++|++|+||||||++|+||||+||... ++++|+|++++++++++++++++
T Consensus 386 l~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~ 465 (582)
T PRK11176 386 ANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINK 465 (582)
T ss_pred HHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999854 24899999999999999999999
Q ss_pred CcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhc
Q 000463 1390 KPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDC 1469 (1479)
Q Consensus 1390 lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~ 1469 (1479)
+|+||||.+||+|.+|||||||||+|||||+++|+|||||||||+||++|++.|.+.|++..++||+|+||||++++.+|
T Consensus 466 lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~ 545 (582)
T PRK11176 466 MDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKA 545 (582)
T ss_pred cccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred CEEEEEeCCC
Q 000463 1470 DRVIVVDAGL 1479 (1479)
Q Consensus 1470 DrIlVL~~G~ 1479 (1479)
|+|++||+|+
T Consensus 546 D~Ii~l~~g~ 555 (582)
T PRK11176 546 DEILVVEDGE 555 (582)
T ss_pred CEEEEEECCE
Confidence 9999999995
No 21
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.6e-70 Score=696.73 Aligned_cols=535 Identities=18% Similarity=0.217 Sum_probs=419.9
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCC-CCCC---Ccch--hHHHHHHHHHHHHHHHHHHHHHH
Q 000463 938 YKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSF---NPSL--FIGVYGSTAVLSMVILVVRAYFV 1011 (1479)
Q Consensus 938 y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~---~~~~--~~~vy~~l~~~~~~~~~~~~~~~ 1011 (1479)
+++|++..+++ +.+.+++.++..++.+..++.+.+..+... .... .... ....+.++.++..++.++..++.
T Consensus 7 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (574)
T PRK11160 7 FLKLYKRHWFM--LSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVS 84 (574)
T ss_pred HHHHHhhhhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555443322 223334444555555555555555443210 1000 0011 12234445566777778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000463 1012 THVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIF 1091 (1479)
Q Consensus 1012 ~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 1091 (1479)
...+.+....++.++++++++.|+.||++.++|++++|+++|++.++..+...+..++...+.+++.++++++.+|++.+
T Consensus 85 ~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 164 (574)
T PRK11160 85 HDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLAL 164 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999888888888888888889999999998876
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHh
Q 000463 1092 LVIPLAWA-NYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSN 1170 (1479)
Q Consensus 1092 ~~ip~~~~-~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~ 1170 (1479)
+++..+++ ...+..++.+..+...+......+.+.+.+.|+++|+.+||+|+.|+++.+++.+..++..+.........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (574)
T PRK11160 165 TLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLT 244 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55333322 22233444444455555556677888899999999999999999999999988888887777666655555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccch
Q 000463 1171 EWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYG-LSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEA 1249 (1479)
Q Consensus 1171 ~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~-~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~ 1249 (1479)
.+.....+++..+...+..++......+.++.|..-..+.|. .....++..+......+.....+.+|+.++.+.++|.
T Consensus 245 ~~~~~~~~~~~~~~~~~i~~~g~~~~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~ 324 (574)
T PRK11160 245 GLSQALMILANGLTVVLMLWLAAGGVGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEV 324 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 555555555544433333222222224556666554444453 3334455666677778888899999999999876653
Q ss_pred hccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEc
Q 000463 1250 AWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIID 1329 (1479)
Q Consensus 1250 ~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~ID 1329 (1479)
+.. ...+ ..+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|++|
T Consensus 325 ~~~--~~~~--~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~ 400 (574)
T PRK11160 325 TFP--TTST--AAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLN 400 (574)
T ss_pred CCC--cccC--CCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEC
Confidence 211 0111 113457899999999998655569999999999999999999999999999999999999999999999
Q ss_pred CEecCCCChhhhhcceEEEcCccccccccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCch
Q 000463 1330 GIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVG 1408 (1479)
Q Consensus 1330 G~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1408 (1479)
|+|+++++.+++|++|++|||||.+|+|||||||... ++.+|+++++|++++++++++.+ |+||||.+||+|.+||||
T Consensus 401 g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgG 479 (574)
T PRK11160 401 GQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGG 479 (574)
T ss_pred CEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHH
Confidence 9999999999999999999999999999999999765 36899999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1409 QRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1409 QrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|++|++|+
T Consensus 480 qrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~ 550 (574)
T PRK11160 480 EQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQ 550 (574)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCe
Confidence 99999999999999999999999999999999999999999888999999999999999999999999996
No 22
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.6e-70 Score=696.40 Aligned_cols=523 Identities=24% Similarity=0.320 Sum_probs=445.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccccccCCCCCC--CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 952 VAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSF--NPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRS 1029 (1479)
Q Consensus 952 ~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~--~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ 1029 (1479)
++.+++.++..++....++++....+....... ....+...++++.++..++.+++.++....+.+....++..++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 96 (571)
T TIGR02203 17 VLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEK 96 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455555555666666543332111111 112234456677777888889999999999999999999999999
Q ss_pred HhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1030 ILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLS 1109 (1479)
Q Consensus 1030 il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~ 1109 (1479)
+++.|.++|++.+.|++++|+++|++.++..+...+..++..++.+++.++++++++|++.++++.++++..++...+.+
T Consensus 97 ~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~ 176 (571)
T TIGR02203 97 LLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSK 176 (571)
T ss_pred HHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888877777777777777777
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHH
Q 000463 1110 TSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLAT 1189 (1479)
Q Consensus 1110 ~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~ 1189 (1479)
..++..+......++..+++.|+++|+.+||+++.++++.+++.+..+...+..........+.....+++..+...+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (571)
T TIGR02203 177 RLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVL 256 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777888999999999999999999999999999998888887777766666666666655555544333322
Q ss_pred HH-HHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccE
Q 000463 1190 LF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNV 1268 (1479)
Q Consensus 1190 ~~-~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I 1268 (1479)
++ ......+.+++|.+....+|...+..++..+......+.....+.+|+.++.+.+++.+.. ..+.+ +..+.|
T Consensus 257 ~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~~--~~~~~i 331 (571)
T TIGR02203 257 FIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG---TRAIE--RARGDV 331 (571)
T ss_pred HHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCCCC--CCCCeE
Confidence 22 3344568899999999999999999999999999999999999999999999876653211 11111 245789
Q ss_pred EEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEE
Q 000463 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGII 1348 (1479)
Q Consensus 1269 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iI 1348 (1479)
+++||+|+|++..+++|+|+||+|++||+|+|+|+||||||||+++|.|+++|++|+|++||+|+++++.+++|++++|+
T Consensus 332 ~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v 411 (571)
T TIGR02203 332 EFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALV 411 (571)
T ss_pred EEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEE
Confidence 99999999987556799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccccHhhhcCCCC--CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEE
Q 000463 1349 PQEPVLFEGTVRSNIDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLL 1426 (1479)
Q Consensus 1349 pQdp~LF~gTIR~NLdp~~--~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1426 (1479)
||||.+|+|||||||..++ +++|++++++++++++++++.++|+||||.++|+|.+||||||||||||||++++|+||
T Consensus 412 ~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~il 491 (571)
T TIGR02203 412 SQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPIL 491 (571)
T ss_pred ccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999998663 68999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1427 FMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1427 iLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
+||||||+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+
T Consensus 492 lLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~ 544 (571)
T TIGR02203 492 ILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGR 544 (571)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCE
Confidence 99999999999999999999999989999999999999999999999999985
No 23
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=5.2e-70 Score=688.61 Aligned_cols=517 Identities=20% Similarity=0.276 Sum_probs=417.9
Q ss_pred HHHHHHHHHHHhhhhhhhcccccccCC-CC-CCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 954 VLLLSVAWQGSLMAGDYWLSYETSEDH-SM-SFN-PSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSI 1030 (1479)
Q Consensus 954 ~l~~~~~~~~~~~~~~~wl~~~~~~~~-~~-~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~i 1030 (1479)
.+++.++..++.+..++.+++..+... .. ... ...+.+.++++.++..++.+++.+.....+.+...+++.++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l 87 (529)
T TIGR02857 8 LGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAV 87 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555556666665555444211 11 111 123445566667777888889999999999999999999999999
Q ss_pred hcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1031 LHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLST 1110 (1479)
Q Consensus 1031 l~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~ 1110 (1479)
++.|..+|++.++|++++|+++|++.++..+...+..++...+.+++.+++++.++|.+.++++..+++..++...+.+.
T Consensus 88 ~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~ 167 (529)
T TIGR02857 88 AALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWA 167 (529)
T ss_pred HhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888888887788888888888888886655443333333333333333
Q ss_pred HHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHH-H
Q 000463 1111 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLA-T 1189 (1479)
Q Consensus 1111 ~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~-~ 1189 (1479)
.+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..........+......++..+...+. .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (529)
T TIGR02857 168 AQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAV 247 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444556678889999999999999999999999988887777666655555445555555555444433222 2
Q ss_pred HHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEE
Q 000463 1190 LFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVD 1269 (1479)
Q Consensus 1190 ~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~ 1269 (1479)
+.......+.++.|.+...+.|+..+..++..+...+..+.....+.+|+.++.+.+++... . .+...+..+.|+
T Consensus 248 ~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~----~-~~~~~~~~~~i~ 322 (529)
T TIGR02857 248 YIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG----K-APVTAAPAPSLE 322 (529)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC----C-cCCCCCCCCeEE
Confidence 22223336778888887888888888888888888999999999999999999975543211 1 111122346899
Q ss_pred EEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEc
Q 000463 1270 LIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIP 1349 (1479)
Q Consensus 1270 ~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIp 1349 (1479)
|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|.+||+|+++++.+++|+++++||
T Consensus 323 ~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~ 402 (529)
T TIGR02857 323 FSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVP 402 (529)
T ss_pred EEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEc
Confidence 99999999866557999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEE
Q 000463 1350 QEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFM 1428 (1479)
Q Consensus 1350 Qdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiL 1428 (1479)
|||.+|+|||||||... ++++|+++++|++.++++++++++|+||||.+||+|.+||||||||++||||++++|+||||
T Consensus 403 Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ilil 482 (529)
T TIGR02857 403 QHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLL 482 (529)
T ss_pred CCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999865 46799999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEE
Q 000463 1429 DEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVV 1475 (1479)
Q Consensus 1429 DEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL 1475 (1479)
|||||+||++|++.|++.|++..+++|+|+||||+++++.||||+||
T Consensus 483 DE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 483 DEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred eCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999988899999999999999999999986
No 24
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=9.3e-70 Score=705.59 Aligned_cols=539 Identities=23% Similarity=0.326 Sum_probs=437.6
Q ss_pred hHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCC-CCCCC-cchhHHHHHHHHHHHHHHHHHHHHHH
Q 000463 934 GLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFN-PSLFIGVYGSTAVLSMVILVVRAYFV 1011 (1479)
Q Consensus 934 ~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~ 1011 (1479)
++..++.+++..++. +..++++.++..++.++.++.+....|... ..... ...+...++++.++..++.+++.++.
T Consensus 126 ~~~~~~~~~~~~~~~--~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~ 203 (694)
T TIGR01846 126 GFSWFIPAIIRYRKQ--FREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLF 203 (694)
T ss_pred cHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555543322 233444555666666677777665554311 11111 12234445566667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000463 1012 THVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIF 1091 (1479)
Q Consensus 1012 ~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 1091 (1479)
...+.+....++.++++++++.|++||++.++|++++|+ +|++.+...+...+...+..++.++..++++++++|++.+
T Consensus 204 ~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 282 (694)
T TIGR01846 204 AHLTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTG 282 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 6999999888777666665666666667788888998876
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhH
Q 000463 1092 LVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNE 1171 (1479)
Q Consensus 1092 ~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1171 (1479)
+++..++++..+..+..+..+...+......+...+++.|+++|+.+||+||.|+.+.+++.+..+...+..+.......
T Consensus 283 i~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (694)
T TIGR01846 283 VVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGN 362 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65544444444333333333444444445567788999999999999999999999999998888887777766666666
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchh
Q 000463 1172 WLGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAA 1250 (1479)
Q Consensus 1172 wl~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~ 1250 (1479)
+......++..+...+..++ ......+.++.|.+.....+...+..++..+...+..++....+.+|+.++.+.|+|.+
T Consensus 363 ~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 442 (694)
T TIGR01846 363 IAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPR 442 (694)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 66655555554443333322 33345678999988888889999999999999999999999999999999998877643
Q ss_pred ccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcC
Q 000463 1251 WKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDG 1330 (1479)
Q Consensus 1251 ~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG 1330 (1479)
.. ...+. .+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|++||
T Consensus 443 ~~--~~~~~--~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg 518 (694)
T TIGR01846 443 SA--GLAAL--PELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDG 518 (694)
T ss_pred CC--CCCCC--CCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 11 11111 123578999999999987666799999999999999999999999999999999999999999999999
Q ss_pred EecCCCChhhhhcceEEEcCccccccccHhhhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchH
Q 000463 1331 IDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1331 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
+|+++++.+++|+++++|||||.+|+|||||||...+ +++|+++++|++++++++++.++|+||||.++|+|.+|||||
T Consensus 519 ~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq 598 (694)
T TIGR01846 519 VDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQ 598 (694)
T ss_pred EehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHH
Confidence 9999999999999999999999999999999998653 689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||++||||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++++..||||+||++|+
T Consensus 599 ~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~ 668 (694)
T TIGR01846 599 RQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQ 668 (694)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999888999999999999999999999999996
No 25
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=9.2e-69 Score=685.69 Aligned_cols=544 Identities=19% Similarity=0.241 Sum_probs=429.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 319 RTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGM 398 (1479)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~ 398 (1479)
++...+.+++.++...++.++..++..+.|+++..+++.+..++......+.++.++++..++..++.....+...+.+.
T Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (588)
T PRK11174 13 LKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAGQ 92 (588)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556778888899999999999999999999999999764221111222334455566666777777777777789999
Q ss_pred HHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 000463 399 LIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGAS-VITTVV 476 (1479)
Q Consensus 399 riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s-~l~gl~ 476 (1479)
++...+...+|+|.++++.....++++|+++|.++.|++++.+++. .+..++...+..++++++++. ++|. +++.++
T Consensus 93 ~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~l~~l~ 171 (588)
T PRK11174 93 HIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFP-INWAAGLILLG 171 (588)
T ss_pred HHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 9999999999999999999988889999999999999999998764 555666555555555444432 2322 222233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Q 000463 477 GIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRI----LSFRESEFGWLTKFMYSIS 552 (1479)
Q Consensus 477 ~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I----~~~R~~El~~l~k~~~~~a 552 (1479)
++++...+...+.++.++.+++.++..++..+.+.|.++|+++||.|+||+.+.++. ++.|+.+.+..+.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (588)
T PRK11174 172 TAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSA 251 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333344567788888889999999999999999999999999999999887776 5556666555554433333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC--------ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000463 553 GNIIVMWSTPVLISTLTFATALLFGV--------PLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYML 624 (1479)
Q Consensus 553 ~~~~~~~~~p~~v~~~tF~~~~l~~~--------~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~ 624 (1479)
+..++.. .+.++ ++.++.+.+.|. .+++..+|.++.+...+..|+..++..+..+.++++|.+||.++++
T Consensus 252 ~~~~~~~-~~~~~-~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 329 (588)
T PRK11174 252 VLEFFAS-ISIAL-VAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLE 329 (588)
T ss_pred HHHHHHH-HHHHH-HHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3322222 22222 222333333331 2344455666677788889999999999999999999999999998
Q ss_pred cccCcccccccccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEE
Q 000463 625 SRELVNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKV 704 (1479)
Q Consensus 625 ~~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i 704 (1479)
.++.++..............|+++|++|.|++ ++++|+|+||++++||++||+||+|||||||+++|+|++ |++|+|
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I 406 (588)
T PRK11174 330 TPLAHPQQGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSL 406 (588)
T ss_pred CCCcccCCCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEE
Confidence 76532211110001012346999999987753 357999999999999999999999999999999999999 999999
Q ss_pred EECC-------------eEEEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCcc
Q 000463 705 KVCG-------------TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINL 770 (1479)
Q Consensus 705 ~~~g-------------~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~L 770 (1479)
.++| +++||||+|++|++||+|||.+|.+ .++++++++++.|+++++++.+|+|++|.+||+|.+|
T Consensus 407 ~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~L 486 (588)
T PRK11174 407 KINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGL 486 (588)
T ss_pred EECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCC
Confidence 9998 4899999999999999999999965 7888999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEec
Q 000463 771 SGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSG 850 (1479)
Q Consensus 771 SGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g 850 (1479)
|||||||++||||++++|+|+|||||||+||++++++|.+ .+....+++|+|+|||+++.+..||+|++|++|+|+++|
T Consensus 487 SGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~-~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G 565 (588)
T PRK11174 487 SVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQ-ALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQG 565 (588)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHH-HHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999999999999999986 445556899999999999999999999999999999999
Q ss_pred ChHHHHhcCcchHHHHHHh
Q 000463 851 RYNALLNSGMDFGALVAAH 869 (1479)
Q Consensus 851 ~~~~l~~~~~~f~~l~~~~ 869 (1479)
+++|++++++.|.++...+
T Consensus 566 ~~~eL~~~~~~y~~l~~~q 584 (588)
T PRK11174 566 DYAELSQAGGLFATLLAHR 584 (588)
T ss_pred CHHHHHhcchHHHHHHHHh
Confidence 9999999888888877543
No 26
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-71 Score=702.61 Aligned_cols=489 Identities=25% Similarity=0.329 Sum_probs=404.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHH
Q 000463 986 PSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFV 1065 (1479)
Q Consensus 986 ~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~ 1065 (1479)
...+...|..+++...+..++...++.+.|.+...+++++.+++++|++++|||.+..|++..|+++|++.+++.+...+
T Consensus 70 ~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKv 149 (1228)
T KOG0055|consen 70 VSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKV 149 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHH
Confidence 34577778888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcH
Q 000463 1066 GITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQ 1145 (1479)
Q Consensus 1066 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~ 1145 (1479)
+.++..+.++++.+++.+++.|.+.+++++..++.......+.+..-.....+....+..-+...|++.+++|+.+|+.|
T Consensus 150 g~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq 229 (1228)
T KOG0055|consen 150 GNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGE 229 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCc
Confidence 99999999999999999999999988776665555544444444433444444455556677899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHH---HHHHHH-HHhccCCcChhHHHHHHHHHHHHHHHHHH
Q 000463 1146 TTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFC---LATLFM-ILLPSSIIKPENVGLSLSYGLSLNGVLFW 1221 (1479)
Q Consensus 1146 ~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~---~~~~~~-v~~~~~~~~~g~vgl~l~y~~~l~~~l~~ 1221 (1479)
++..+++.+.++...+...... -|.++...+...++++ ...++. .++..+..++|.+...+.+.+.-...+..
T Consensus 230 ~~e~~ry~~~L~~~~k~gi~~g---~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgq 306 (1228)
T KOG0055|consen 230 KKEIERYSKALENALKFGIKKG---LFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQ 306 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhc
Confidence 9999999998887776654322 2334333333222222 222222 22334455665544443333333344444
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCC-CcceeeeeEEEeCCcEEEE
Q 000463 1222 AIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNT-PLVLKGITLSIHGGEKIGV 1300 (1479)
Q Consensus 1222 ~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~-~~vL~~is~~I~~GekvgI 1300 (1479)
..-....+.+..+|..+|.+.++..+.......... ..-..+|.|+|+||+|+||... .++|+|+||+|++||.|||
T Consensus 307 a~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~--~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~val 384 (1228)
T KOG0055|consen 307 ASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGR--VLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVAL 384 (1228)
T ss_pred cccchHHHhccccchHHHHHHhcCCCCCCcccccCC--cccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEE
Confidence 445556677788899999998765443221111111 1223579999999999998654 3699999999999999999
Q ss_pred ECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCCC-CCCHHHHHHHHH
Q 000463 1301 VGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLE 1379 (1479)
Q Consensus 1301 VGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~ 1379 (1479)
||+|||||||++++|.|+|+|++|+|+|||.|+++++.++||++||+|.|||+||++||+|||.... +.|++||.+|++
T Consensus 385 VG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k 464 (1228)
T KOG0055|consen 385 VGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAK 464 (1228)
T ss_pred ECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998664 789999999999
Q ss_pred HcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEE
Q 000463 1380 RCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISI 1459 (1479)
Q Consensus 1380 ~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~I 1459 (1479)
.++.++||..+|+||||.|||+|..||||||||+||||||+|+|+||+||||||+||+++|+.+|++|++..+|+|.|+|
T Consensus 465 ~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivV 544 (1228)
T KOG0055|consen 465 AANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVV 544 (1228)
T ss_pred HccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChhhhhhcCEEEEEeCCC
Q 000463 1460 AHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1460 AHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||||+||+++|+|+||++|+
T Consensus 545 aHRLStIrnaD~I~v~~~G~ 564 (1228)
T KOG0055|consen 545 AHRLSTIRNADKIAVMEEGK 564 (1228)
T ss_pred eeehhhhhccCEEEEEECCE
Confidence 99999999999999999996
No 27
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.6e-69 Score=638.60 Aligned_cols=486 Identities=22% Similarity=0.304 Sum_probs=404.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHH
Q 000463 987 SLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVG 1066 (1479)
Q Consensus 987 ~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~ 1066 (1479)
..+++..+++.++..++.+.+.......+.++...++.++++++.+.+..+-...|+|++...+...++.++..+..++.
T Consensus 40 ~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLP 119 (559)
T COG4988 40 LPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLP 119 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 34566667777788888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhC
Q 000463 1067 ITVAMYITLLGIFIITCQYAWPTIF---LVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFG 1143 (1479)
Q Consensus 1067 ~~~~~~~~~~~~~~v~~~~~~~~~~---~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~ 1143 (1479)
..+.+.+..+.+++.++..+|...+ +..|++++++.+... .++...+..-.+-..+.+||-+.++|+.|+|+|+
T Consensus 120 q~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~---~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~ 196 (559)
T COG4988 120 QMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGL---AAKDASEKQFSALARLSGHFLDRLRGLETLRAFG 196 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhc
Confidence 9999999999999999999998654 446766665554332 2222223333445668899999999999999999
Q ss_pred cHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHh-cc-CCcChhHHHHHHHHHHHHHHHHHH
Q 000463 1144 KQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILL-PS-SIIKPENVGLSLSYGLSLNGVLFW 1221 (1479)
Q Consensus 1144 ~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~-~~-~~~~~g~vgl~l~y~~~l~~~l~~ 1221 (1479)
..+...++..+...+..+........+.--+..+|++..+.++.+++...+. .. |.++-...-+++-.+.-+..++..
T Consensus 197 ~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~ 276 (559)
T COG4988 197 RTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRD 276 (559)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHH
Confidence 9887766665555555444444444444445677777777766666654322 12 344433333445556667777777
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEE
Q 000463 1222 AIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVV 1301 (1479)
Q Consensus 1222 ~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIV 1301 (1479)
+...+..-.+...+.+.+..+.+.|.+.+... ......|.....++.+|++++|+++. ++++|+||+++|||++|||
T Consensus 277 lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~--~~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~talv 353 (559)
T COG4988 277 LGSFFHAAAAGEAAADKLFTLLESPVATPGSG--EKAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQLTALV 353 (559)
T ss_pred HHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCc--cccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcEEEEE
Confidence 77777777777889999999998877644221 11123333345667779999999775 6999999999999999999
Q ss_pred CCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCCC-CCCHHHHHHHHHH
Q 000463 1302 GRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLER 1380 (1479)
Q Consensus 1302 GrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~ 1380 (1479)
|+||||||||+++|.|+.+|++|+|.+||+|.++++.+++|+++++|||+|++|+|||||||...+ +.+||||++|+++
T Consensus 354 G~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~ 433 (559)
T COG4988 354 GASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQ 433 (559)
T ss_pred CCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998765 4899999999999
Q ss_pred cCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEc
Q 000463 1381 CQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIA 1460 (1479)
Q Consensus 1381 ~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IA 1460 (1479)
+++.++++. |+||||.+||+|.+|||||+||++||||++++++++++|||||+||.|||+.|++.|.+.++++|||+||
T Consensus 434 a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~it 512 (559)
T COG4988 434 AGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVIT 512 (559)
T ss_pred hcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEE
Confidence 999999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhhhhcCEEEEEeCCC
Q 000463 1461 HRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1461 HRl~ti~~~DrIlVL~~G~ 1479 (1479)
||++.+.++|+|+|||+||
T Consensus 513 Hrl~~~~~~D~I~vld~G~ 531 (559)
T COG4988 513 HRLEDAADADRIVVLDNGR 531 (559)
T ss_pred cChHHHhcCCEEEEecCCc
Confidence 9999999999999999996
No 28
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=4.3e-68 Score=678.57 Aligned_cols=524 Identities=20% Similarity=0.280 Sum_probs=417.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 951 VVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSI 1030 (1479)
Q Consensus 951 ~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~i 1030 (1479)
+.+++++.++..++.+..++++....|... +......++..++++.++..+..++...+......+....+..++++++
T Consensus 21 ~~~~~~~~i~~~~~~~~~~~~~~~iid~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l 99 (588)
T PRK13657 21 GILLAVANVLLAAATFAEPILFGRIIDAIS-GKGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFERI 99 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555556666777777777776554311 1111112233333333444444444444444555555556667999999
Q ss_pred hcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1031 LHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLST 1110 (1479)
Q Consensus 1031 l~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~ 1110 (1479)
++.|+.+|++.+.|++++|+++|++.+.......+..++...+..++.+++++..+|++.++++.+++++..+..++.+.
T Consensus 100 ~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~ 179 (588)
T PRK13657 100 IQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMRK 179 (588)
T ss_pred HhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999987777777777777777777777788888888776666666666666666666
Q ss_pred HHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHH-
Q 000463 1111 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLAT- 1189 (1479)
Q Consensus 1111 ~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~- 1189 (1479)
.++..+......+...+++.|+++|+.+||+|+.++.+.+++.+..+...+..........+.....+++..+...++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (588)
T PRK13657 180 TKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAILV 259 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777788899999999999999999999999888887777766665544444444443333333333222222
Q ss_pred HHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEE
Q 000463 1190 LFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVD 1269 (1479)
Q Consensus 1190 ~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~ 1269 (1479)
+.......+.++.|.+...+.|...+..++..+......+.....+.+|+.++.+.+++.+.. ....+. -+..+.|+
T Consensus 260 ~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~-~~~~~~--~~~~~~I~ 336 (588)
T PRK13657 260 LGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP-PGAIDL--GRVKGAVE 336 (588)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-CCCCCc--CCCCCeEE
Confidence 223344568899999888888999999999999998999999999999999988765432211 111011 12346899
Q ss_pred EEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEc
Q 000463 1270 LIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIP 1349 (1479)
Q Consensus 1270 ~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIp 1349 (1479)
++||+|+|+++ +++|+|+||+++|||++||||+||||||||+++|+|+++|++|+|++||.|+++++.+++|++|+|+|
T Consensus 337 ~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~ 415 (588)
T PRK13657 337 FDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVF 415 (588)
T ss_pred EEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEe
Confidence 99999999744 45999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEE
Q 000463 1350 QEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFM 1428 (1479)
Q Consensus 1350 Qdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiL 1428 (1479)
|||.+|+|||||||... ++.+|++++++++++++++++.++|+|+||.++|+|.+|||||||||+||||++++|+||||
T Consensus 416 Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~iliL 495 (588)
T PRK13657 416 QDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILIL 495 (588)
T ss_pred cCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999865 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1429 DEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1429 DEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||||+||++|++.|++.|++..+++|+|+||||++++..||||++|++|+
T Consensus 496 DEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~ 546 (588)
T PRK13657 496 DEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGR 546 (588)
T ss_pred eCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCE
Confidence 999999999999999999999888999999999999999999999999985
No 29
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-68 Score=621.70 Aligned_cols=477 Identities=20% Similarity=0.319 Sum_probs=395.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHH
Q 000463 997 AVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLL 1076 (1479)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~ 1076 (1479)
++...+..+...+.......+.-..++.++|+++...+..-...-..|+++||+..|++.+|...-..+...+..++..+
T Consensus 68 aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~ 147 (573)
T COG4987 68 AILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIA 147 (573)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHH
Confidence 34444555555566667788899999999999999999999999999999999999999999998888888888777777
Q ss_pred HHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHH
Q 000463 1077 GIFIITCQYAWPTIFLVIP-LAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNR 1155 (1479)
Q Consensus 1077 ~~~~v~~~~~~~~~~~~ip-~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~ 1155 (1479)
++.+...+.+|++.+.+.. ++++.+.+...+.+..|...+.-...++.+.++|.|.+.|....+.||+++.|.+.....
T Consensus 148 ~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~ 227 (573)
T COG4987 148 VVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEAT 227 (573)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHH
Confidence 7777777788876654333 333333344444455566666666778899999999999999999999999999999999
Q ss_pred HHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHH-HHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh
Q 000463 1156 VNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLA-TLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAI-YMSCFVENRM 1233 (1479)
Q Consensus 1156 ~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~-~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~-~~~~~~e~~~ 1233 (1479)
.+...+..........|-.+.+.++..+.+... ++.......|..+...+.+++--.+.....+.-+. ..+.++....
T Consensus 228 e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~ 307 (573)
T COG4987 228 EASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVI 307 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHH
Confidence 888888888888888898888888877766533 33333334444432222222211122222222233 3456778888
Q ss_pred hhHHHHHHhhcCccchhccccCCCCCCCCCCCc-cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHH
Q 000463 1234 VSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHG-NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLI 1312 (1479)
Q Consensus 1234 ~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g-~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl 1312 (1479)
-|..|+.+..+.++|.... .+ .-|..+ .++++||+|+|+.+.++||+|+||++++||||||+||||||||||+
T Consensus 308 ~Sa~Rl~~i~~q~~e~~~~-~~-----~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTll 381 (573)
T COG4987 308 ASARRLNDILDQKPEVTFP-DE-----QTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLL 381 (573)
T ss_pred HHHHHHhhhccCCcccCCC-cc-----ccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHH
Confidence 8999999988877765432 11 112222 7999999999999888999999999999999999999999999999
Q ss_pred HHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCc
Q 000463 1313 QVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKP 1391 (1479)
Q Consensus 1313 ~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp 1391 (1479)
++|.|.++|++|+|..+|.+++.++.+++|+.|++++|.+++|+||+|+||... .+.||||+|+||+++||++++++.|
T Consensus 382 qLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p 461 (573)
T COG4987 382 QLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAP 461 (573)
T ss_pred HHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhCh
Confidence 999999999999999999999999999999999999999999999999999754 4699999999999999999999999
Q ss_pred CCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCE
Q 000463 1392 DKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDR 1471 (1479)
Q Consensus 1392 ~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~Dr 1471 (1479)
+||||.+||+|.+||||||||++|||+||++.++++|||||.+||++||++|.+.|.+..+|+|+|+||||+..+..|||
T Consensus 462 ~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~dr 541 (573)
T COG4987 462 DGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDR 541 (573)
T ss_pred hhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCC
Q 000463 1472 VIVVDAGL 1479 (1479)
Q Consensus 1472 IlVL~~G~ 1479 (1479)
|+|||+|+
T Consensus 542 Iivl~~Gk 549 (573)
T COG4987 542 IIVLDNGK 549 (573)
T ss_pred EEEEECCe
Confidence 99999996
No 30
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=5.5e-68 Score=677.65 Aligned_cols=539 Identities=22% Similarity=0.300 Sum_probs=432.4
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCC-CCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 937 VYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFN-PSLFIGVYGSTAVLSMVILVVRAYFVTHV 1014 (1479)
Q Consensus 937 ~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~~~ 1014 (1479)
.++.|++..++. +.+.+++.++..++.+..++.+....+... ..... ...++.+++++.++..++.+++.++....
T Consensus 8 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (576)
T TIGR02204 8 ALWPFVRPYRGR--VLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWL 85 (576)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555543322 223344445555566666665554443210 11111 12234445555556667778888888899
Q ss_pred HHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000463 1015 GLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVI 1094 (1479)
Q Consensus 1015 ~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i 1094 (1479)
+.+....++..+++++++.|.++|++.+.|++++|+++|++.++..+...+..++...+.+++.+++++.++|++.++++
T Consensus 86 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 165 (576)
T TIGR02204 86 GERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVL 165 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988888888888888888888888888888766554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHH
Q 000463 1095 PLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLG 1174 (1479)
Q Consensus 1095 p~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~ 1174 (1479)
...++...+...+.+..+...+.....++...+++.|+++|+.+||+|+.++.+.+++.+..+...+..........|+.
T Consensus 166 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (576)
T TIGR02204 166 LAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLT 245 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444555555566666777888999999999999999999999988888887776666555444444554
Q ss_pred HHHHHHHHHHHHHHHH-HHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccc
Q 000463 1175 FRLELLGSFTFCLATL-FMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKM 1253 (1479)
Q Consensus 1175 ~~l~~l~~~~~~~~~~-~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~ 1253 (1479)
.....+..+...+..+ .......+.++.|.+.....|...+..++..+...+..+.....+.+|+.++.+.++|.+...
T Consensus 246 ~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~ 325 (576)
T TIGR02204 246 AIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPA 325 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCC
Confidence 4443333322222222 233345678899998888899999999999999999999999999999999988765532111
Q ss_pred cCCCCCCCCCCCccEEEEeeeeeecCCC-CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEe
Q 000463 1254 EDRLPPPNWPAHGNVDLIDLQVRYRSNT-PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGID 1332 (1479)
Q Consensus 1254 ~~~~~~~~wp~~g~I~~~nvs~~Y~~~~-~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~d 1332 (1479)
...+..+|..+.|+++||+|+|+++. +++|+|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|++||+|
T Consensus 326 --~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~ 403 (576)
T TIGR02204 326 --HPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVD 403 (576)
T ss_pred --CCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEE
Confidence 11112234457899999999998643 569999999999999999999999999999999999999999999999999
Q ss_pred cCCCChhhhhcceEEEcCccccccccHhhhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1333 ISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1333 I~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
+++++.+++|++++|+||||.+|+|||||||...+ +.+|++++++++++++.+++.++|+|+||.++|+|.+|||||||
T Consensus 404 i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Q 483 (576)
T TIGR02204 404 LRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQ 483 (576)
T ss_pred HHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHH
Confidence 99999999999999999999999999999998654 57899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|++||||++++|+|||||||||++|.+|++.|.+.|++..+++|+|+||||++.+..||||++|++|+
T Consensus 484 rl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~ 551 (576)
T TIGR02204 484 RIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGR 551 (576)
T ss_pred HHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999989999999999999999999999999995
No 31
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-70 Score=618.23 Aligned_cols=506 Identities=19% Similarity=0.291 Sum_probs=396.2
Q ss_pred hhhhhhhcccccccCCCCCCCcchhHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccee
Q 000463 965 LMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVL------SMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFF 1038 (1479)
Q Consensus 965 ~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~------~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fF 1038 (1479)
....+...++..+.-..+..........|+.+.++ +.++.-+|+++.......+.+.+--++++|+....+.|.
T Consensus 231 ~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwH 310 (790)
T KOG0056|consen 231 NVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWH 310 (790)
T ss_pred hhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeee
Confidence 33344444444433222322333344455555443 356777888888888999999999999999999999999
Q ss_pred cccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHHHHH----HHHHHHHHH
Q 000463 1039 DTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGI-FIITCQYAWPTIFLVIPLAWANYWYR----GYYLSTSRE 1113 (1479)
Q Consensus 1039 d~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~ip~~~~~~~~~----~~y~~~~r~ 1113 (1479)
-.+.+|+++.-..+..+.+. .+...+..+.-.+.-+... +-....++|++.+++...+.+|..+. ..-.+..|.
T Consensus 311 L~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~ 389 (790)
T KOG0056|consen 311 LNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRK 389 (790)
T ss_pred ecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHH
Confidence 99999999887777666655 3322222222222222222 22233457777766666655554422 111122222
Q ss_pred HHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHHHH-H
Q 000463 1114 LTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLF-M 1192 (1479)
Q Consensus 1114 l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~ 1192 (1479)
+...+.+++ ..-.+++-+..|+|-|++|+.-.+++.+.++.+++..+.....-..+...-+.+..+...+..++ +
T Consensus 390 Mn~~~nesr----Ar~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~a 465 (790)
T KOG0056|consen 390 MNNSWNESR----ARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCA 465 (790)
T ss_pred hhhhhhhhh----hhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheee
Confidence 333333333 34568899999999999999999999999999999887776655444444333333322222222 2
Q ss_pred HHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEe
Q 000463 1193 ILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLID 1272 (1479)
Q Consensus 1193 v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~n 1272 (1479)
+.+..+..+.|..-+..+|.+++.++++|+...+..++++.+-.||+.+.++.++|..+ ....+|---.+|.|+|+|
T Consensus 466 Y~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd---~P~a~pl~~~~G~i~fsn 542 (790)
T KOG0056|consen 466 YRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVD---LPGAPPLKVTQGKIEFSN 542 (790)
T ss_pred eeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhc---CCCCCCccccCCeEEEEE
Confidence 33345677788888999999999999999999999999999999999999987666432 122222233579999999
Q ss_pred eeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCcc
Q 000463 1273 LQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEP 1352 (1479)
Q Consensus 1273 vs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp 1352 (1479)
|+|.|.++.| ||+||||+++||+.||+|||||+||||++++|+|++|.++|.|.|||+||+++..+.||++||+||||.
T Consensus 543 vtF~Y~p~k~-vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDt 621 (790)
T KOG0056|consen 543 VTFAYDPGKP-VLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDT 621 (790)
T ss_pred eEEecCCCCc-eeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcc
Confidence 9999998765 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccHhhhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCC
Q 000463 1353 VLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEA 1431 (1479)
Q Consensus 1353 ~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEa 1431 (1479)
+||++||..||.... .++|||+.+|++.+++||.|...|+||+|.|||+|-.||||||||+++||++||+|.|++||||
T Consensus 622 vLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEA 701 (790)
T KOG0056|consen 622 VLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEA 701 (790)
T ss_pred eeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcch
Confidence 999999999998543 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1432 TASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1432 Ts~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||+||..||+.||+.+.+..+++|.|+||||++||.++|.|+|+++|+
T Consensus 702 TSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~ 749 (790)
T KOG0056|consen 702 TSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGR 749 (790)
T ss_pred hhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCe
Confidence 999999999999999999999999999999999999999999999995
No 32
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.1e-66 Score=662.59 Aligned_cols=534 Identities=18% Similarity=0.252 Sum_probs=419.0
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 938 YKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLK 1017 (1479)
Q Consensus 938 y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~ 1017 (1479)
+++|++..+ ..+.+.+++.++..++.++.++.++...|.... ..+...++..++++.++..+..++...+....+.+
T Consensus 10 l~~~l~~~k--~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (585)
T TIGR01192 10 ALSYLNVHK--NRVLLIVIANITLAAITIAEPILFGRIIDAISS-KSDVLPTLALWAGFGVFNTIAYVLVAREADRLAHG 86 (585)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344554332 223344555566666777777766655542111 11111222222233333344444444444555555
Q ss_pred HHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000463 1018 TAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLA 1097 (1479)
Q Consensus 1018 ~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~ 1097 (1479)
....++.++++++++.|++||+++++|++++|+++|++.+...+...+...+..++.+++.+++++.++|.+.++++.++
T Consensus 87 ~~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 166 (585)
T TIGR01192 87 RRATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLG 166 (585)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667779999999999999999999999999999999999888877777777777777777888889999887776666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHH
Q 000463 1098 WANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRL 1177 (1479)
Q Consensus 1098 ~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l 1177 (1479)
+++.++...+.+..++..+......+...+++.|+++|+.+||+|+.++.+.+++.+..+...+..+.......+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (585)
T TIGR01192 167 ILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLN 246 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666666777777777788899999999999999999999998888877777665555443333222222222
Q ss_pred HHHHHHHHHHHH-HHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCC
Q 000463 1178 ELLGSFTFCLAT-LFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDR 1256 (1479)
Q Consensus 1178 ~~l~~~~~~~~~-~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~ 1256 (1479)
.++..+...++. +.......+.++.|.+...+.|...+..++..+......+.....+.+|+.++.+.+++... ..
T Consensus 247 ~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~---~~ 323 (585)
T TIGR01192 247 RMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREE---PA 323 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---Cc
Confidence 222222222222 22333456788999888888888888889988888889999999999999998876544221 11
Q ss_pred CCCCCC-CCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCC
Q 000463 1257 LPPPNW-PAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL 1335 (1479)
Q Consensus 1257 ~~~~~w-p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~ 1335 (1479)
.+ ..+ +..+.|+++||+|+|+++ .++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||+|+++
T Consensus 324 ~~-~~~~~~~~~i~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~ 401 (585)
T TIGR01192 324 DA-PELPNVKGAVEFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINT 401 (585)
T ss_pred cC-CCCCCCCCeEEEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhh
Confidence 11 112 235689999999999754 358999999999999999999999999999999999999999999999999999
Q ss_pred CChhhhhcceEEEcCccccccccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1336 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1336 i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
++.+++|++++++||||.+|++|+||||... ++.+|++++++++.+++++++.++|+|+||.++|+|.+||||||||++
T Consensus 402 ~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~ 481 (585)
T TIGR01192 402 VTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLA 481 (585)
T ss_pred CCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999865 367999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||||+++|+|||||||||+||.+|++.|++.|++..+++|+|+||||++++..||+|++|++|+
T Consensus 482 lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~ 546 (585)
T TIGR01192 482 IARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGR 546 (585)
T ss_pred HHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCE
Confidence 99999999999999999999999999999999999888999999999999999999999999995
No 33
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.7e-67 Score=665.94 Aligned_cols=486 Identities=20% Similarity=0.252 Sum_probs=398.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHH
Q 000463 989 FIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGIT 1068 (1479)
Q Consensus 989 ~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~ 1068 (1479)
++++++++.++..++.+++.++....+.+...+++.++++++++.|++||++.++|++++|+++|++.++......+..+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~ 117 (569)
T PRK10789 38 WIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTL 117 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34445555556666777777778888999999999999999999999999999999999999999999987776666666
Q ss_pred HHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHH
Q 000463 1069 VAMYITLLGIFIIT-CQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTT 1147 (1479)
Q Consensus 1069 ~~~~~~~~~~~~v~-~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~ 1147 (1479)
+...+..++.++++ +.++|++.++++..+++..++...+.+..++..+......+.+.+++.|+++|+.+||+|+.+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~ 197 (569)
T PRK10789 118 VDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR 197 (569)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHH
Confidence 66655555554444 46788776655544444444444454444544555555677889999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHH-HHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1148 FYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCL-ATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMS 1226 (1479)
Q Consensus 1148 f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~ 1226 (1479)
+.+++.+..+...+..........+..........+...+ ..+.......+.++.|.+.....|...+..++..+....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~ 277 (569)
T PRK10789 198 QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMF 277 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888777666655544333333322222222221111 112223345678888988888888888888888888999
Q ss_pred HHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCC
Q 000463 1227 CFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGS 1306 (1479)
Q Consensus 1227 ~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGS 1306 (1479)
..+.....+.+|+.++.+.++|.+. ...+.+ +..|.|+++|++|+|+.+.+++|+|+||+|+|||++||||+|||
T Consensus 278 ~~~~~~~~a~~ri~~ll~~~~~~~~---~~~~~~--~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGs 352 (569)
T PRK10789 278 NIVERGSAAYSRIRAMLAEAPVVKD---GSEPVP--EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGS 352 (569)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccC---CCCCCC--CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCCC
Confidence 9999999999999999987654321 111111 23578999999999986556799999999999999999999999
Q ss_pred CHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCC-CCCCHHHHHHHHHHcCchH
Q 000463 1307 GKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKD 1385 (1479)
Q Consensus 1307 GKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~ 1385 (1479)
|||||+++|.|+++|++|+|++||+|+++++.+++|++++++||||.+|+|||||||... .+++|++++++++.+++++
T Consensus 353 GKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~ 432 (569)
T PRK10789 353 GKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHD 432 (569)
T ss_pred CHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999865 4689999999999999999
Q ss_pred HHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhh
Q 000463 1386 VVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPT 1465 (1479)
Q Consensus 1386 ~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~t 1465 (1479)
++.++|+|+||.++|+|.+||||||||++||||++++|+|||||||||+||+++++.|++.|++..+++|+|+||||+++
T Consensus 433 ~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~ 512 (569)
T PRK10789 433 DILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSA 512 (569)
T ss_pred HHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred hhhcCEEEEEeCCC
Q 000463 1466 VMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1466 i~~~DrIlVL~~G~ 1479 (1479)
+..||+|++|++|+
T Consensus 513 ~~~~d~i~~l~~G~ 526 (569)
T PRK10789 513 LTEASEILVMQHGH 526 (569)
T ss_pred HHcCCEEEEEeCCE
Confidence 99999999999985
No 34
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.8e-66 Score=624.28 Aligned_cols=546 Identities=21% Similarity=0.256 Sum_probs=420.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 321 TLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSG-KSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGML 399 (1479)
Q Consensus 321 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~r 399 (1479)
.+.+..|+.+..+.++.++.......-|.++.++++-+.. .+.. ..-.-....+....++++++..-..+..+..+.|
T Consensus 140 ~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~-~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~r 218 (716)
T KOG0058|consen 140 GLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSA-DALKRACTILLGLFLIGALANAIRGGLLQYAGER 218 (716)
T ss_pred HHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455678888888888999988888999999999998866 2221 1111122233333445555555555555556666
Q ss_pred HHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000463 400 IRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMM-LQLHAVWLMPLQISVALILLYNCLGAS-VITTVVG 477 (1479)
Q Consensus 400 iR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~-~~~~~~w~~plqi~lal~lL~~~lG~s-~l~gl~~ 477 (1479)
+-..+...+|++.|+..-+-.+++.+||++|.++.|++-+.+.+ .++.+.-=..+|.+.++.++.. +.|. ++..+++
T Consensus 219 v~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~-~S~~Ltlv~~i~ 297 (716)
T KOG0058|consen 219 VVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFS-LSWRLTLVTLIV 297 (716)
T ss_pred HHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh-hhHHHHHHHHHH
Confidence 66666677888999998888899999999999999999998875 4566655566777777766542 2221 1222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 478 IIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIV 557 (1479)
Q Consensus 478 ~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~ 557 (1479)
+.+++.+..+++++.++..++..++..+-.+...|.|++||+|+.|+-|+.-.++-.+.=++-++.-+|-....++....
T Consensus 298 ~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~ 377 (716)
T KOG0058|consen 298 VPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGS 377 (716)
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhH
Confidence 22233333444555555555555555556677889999999999999998755554332222222223322222221111
Q ss_pred --HHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccc
Q 000463 558 --MWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVER 635 (1479)
Q Consensus 558 --~~~~p~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~ 635 (1479)
+...-..++++.+|.+...++.+|++...+++.+-..+..++..+...++.++++.-+.+|+.+|++.++.-+..-..
T Consensus 378 ~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G~~ 457 (716)
T KOG0058|consen 378 TNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLTGTL 457 (716)
T ss_pred HHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCCcc
Confidence 111223456777888888889999999999999999999999999999999999999999999999876543222111
Q ss_pred ccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------
Q 000463 636 VEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------- 708 (1479)
Q Consensus 636 ~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------- 708 (1479)
.|. ...+.|+++|++|+|+.+++.++|+|+||+|+|||.||+|||+||||||+.+.|+.+|+|++|+|.+||
T Consensus 458 ~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~ 536 (716)
T KOG0058|consen 458 APD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDIN 536 (716)
T ss_pred ccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcC
Confidence 222 345789999999999999889999999999999999999999999999999999999999999999999
Q ss_pred ------eEEEEeccCcCCCCcHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHH
Q 000463 709 ------TTAYVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1479)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1479)
+||+|.|+|-+|++||+|||.+|.+. +.+..+++.+.+...+.+..+|+|.+|.+||+|..||||||||||||
T Consensus 537 ~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIA 616 (716)
T KOG0058|consen 537 HKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIA 616 (716)
T ss_pred HHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHH
Confidence 38999999999999999999999872 34455566677777888999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcC-c
Q 000463 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSG-M 860 (1479)
Q Consensus 782 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~-~ 860 (1479)
|||++||.|+||||.|||||+++... .++.+....+++|||+|.|+++.+++||+|+|+++|++++.|+++|+++.. +
T Consensus 617 RALlr~P~VLILDEATSALDaeSE~l-Vq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~g 695 (716)
T KOG0058|consen 617 RALLRNPRVLILDEATSALDAESEYL-VQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSKPNG 695 (716)
T ss_pred HHHhcCCCEEEEechhhhcchhhHHH-HHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhCccc
Confidence 99999999999999999999998654 467787788899999999999999999999999999999999999999876 6
Q ss_pred chHHHHHHhh
Q 000463 861 DFGALVAAHE 870 (1479)
Q Consensus 861 ~f~~l~~~~~ 870 (1479)
.|.++++.+.
T Consensus 696 ly~~Lv~~q~ 705 (716)
T KOG0058|consen 696 LYAKLVQRQL 705 (716)
T ss_pred HHHHHHHHhc
Confidence 7888886543
No 35
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.7e-67 Score=608.81 Aligned_cols=481 Identities=23% Similarity=0.363 Sum_probs=374.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHH
Q 000463 987 SLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVG 1066 (1479)
Q Consensus 987 ~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~ 1066 (1479)
...+..|++..+.+.++..++.+.+.....++-+....+.+++.+.+.+++|.+..+|.+-+++.+-...+...+...+.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~ 153 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVF 153 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999888877777776666655555
Q ss_pred HHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCc
Q 000463 1067 ITVAMYITLLGIFIIT-CQYAWPTIFLVIPLAWANYWYRGYYLSTSR-ELTRLDSITKAPVIHHFSESISGVMTIRAFGK 1144 (1479)
Q Consensus 1067 ~~~~~~~~~~~~~~v~-~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r-~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~ 1144 (1479)
.++..++.+......+ .-+.+.+.++++.....|..+. .+....| ..++....+.........|++.+-.+||+|+.
T Consensus 154 ~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~T-i~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNn 232 (591)
T KOG0057|consen 154 NIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFT-IVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNN 232 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeE-EeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHccc
Confidence 5554444433333222 2233333333322222222111 0111111 11122222333344567899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHh-----ccCCcChhHHHHHHHHHHHHHHHH
Q 000463 1145 QTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILL-----PSSIIKPENVGLSLSYGLSLNGVL 1219 (1479)
Q Consensus 1145 ~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~-----~~~~~~~g~vgl~l~y~~~l~~~l 1219 (1479)
|++-.+++...+.+..+........... +++....++.+...++..+ ..+.++.|..-+..+...++..++
T Consensus 233 E~~Ea~~y~~~l~~~~~~~~~~~~sl~~----lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l 308 (591)
T KOG0057|consen 233 EEYEASRYDGSLKTYERAGLKYSSSLAF----LNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPL 308 (591)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHhHHHH----HHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHH
Confidence 9999999888888777765554433322 3444444443333332222 234556666667777788888888
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEE
Q 000463 1220 FWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIG 1299 (1479)
Q Consensus 1220 ~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Gekvg 1299 (1479)
+.+...+.++...+.-.+-.....+.... +.+. +++--+..|.|+|+||+|.|.++. ++|+|+||+|++|||||
T Consensus 309 ~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~----i~~~-~~~i~~~~~~I~F~dV~f~y~~k~-~iL~gvsf~I~kGekVa 382 (591)
T KOG0057|consen 309 NFLGSVYRELRQALTDMRTLFILLEVDED----IQEA-ALPIELFGGSIEFDDVHFSYGPKR-KVLKGVSFTIPKGEKVA 382 (591)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhhhhhhh----hhhc-cCCcccCCCcEEEEeeEEEeCCCC-ceecceeEEecCCCEEE
Confidence 88888888887777766554433221111 1111 222223457899999999999764 49999999999999999
Q ss_pred EECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCCC-CCCHHHHHHHH
Q 000463 1300 VVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSL 1378 (1479)
Q Consensus 1300 IVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL 1378 (1479)
|||+|||||||++++|+|+++ .+|+|+|||+||++++++.+|+.||+||||..||++||-+||...+ ..+|||+.+++
T Consensus 383 IvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~ 461 (591)
T KOG0057|consen 383 IVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEAC 461 (591)
T ss_pred EECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHH
Confidence 999999999999999999999 9999999999999999999999999999999999999999997654 68999999999
Q ss_pred HHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEE
Q 000463 1379 ERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIIS 1458 (1479)
Q Consensus 1379 ~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~ 1458 (1479)
+++++||.+.++|+||+|.|||+|..||||||||++||||+||+|+|+++|||||+||.+||+.|.+.|++...++|+|+
T Consensus 462 k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~ 541 (591)
T KOG0057|consen 462 KRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIM 541 (591)
T ss_pred HHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred EccChhhhhhcCEEEEEeCCC
Q 000463 1459 IAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1459 IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|+||++++++||+|+|||+|+
T Consensus 542 IvH~l~ll~~~DkI~~l~nG~ 562 (591)
T KOG0057|consen 542 IVHRLDLLKDFDKIIVLDNGT 562 (591)
T ss_pred EEecchhHhcCCEEEEEECCe
Confidence 999999999999999999995
No 36
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.3e-65 Score=665.73 Aligned_cols=541 Identities=19% Similarity=0.212 Sum_probs=444.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 320 TTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGML 399 (1479)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~r 399 (1479)
+..++.+++.++...+..++..++..+.|++++.++|.+...... ...+.++++++++.++..++.....+...+++.+
T Consensus 146 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (710)
T TIGR03796 146 WRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQ-DWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIK 224 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556677777788888888999999999999999976533321 1233455555566666777777777788899999
Q ss_pred HHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 400 IRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVGI 478 (1479)
Q Consensus 400 iR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~ 478 (1479)
+...+...+|+|.++++.....++++|+++|.++.| +++.+++. .+..+....+.+++.+++++..-++-+++.++.+
T Consensus 225 ~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 303 (710)
T TIGR03796 225 LAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFA 303 (710)
T ss_pred HHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888889999999999988 67887654 3444444445555555555544444445555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 479 IGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVM 558 (1479)
Q Consensus 479 il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~ 558 (1479)
++.+.+..++.+...+..++.++..+++.+.+.|.++|+++||.+++|+.+.++..+.+.++.+...+.....+....+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (710)
T TIGR03796 304 AINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLP 383 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556667778888888899999999999999999999999999999999999999888888776665554444333222
Q ss_pred HHHHH--HHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccc---
Q 000463 559 WSTPV--LISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESV--- 633 (1479)
Q Consensus 559 ~~~p~--~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~--- 633 (1479)
..... .+.++.++.+....+.+|.+.++++..++..+..|+..++..+..+.+++++++||.++++.++..+...
T Consensus 384 ~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~ 463 (710)
T TIGR03796 384 TLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEA 463 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccc
Confidence 22222 2334567777777889999999999999999999999999999999999999999999998754322111
Q ss_pred -c--cccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--
Q 000463 634 -E--RVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-- 708 (1479)
Q Consensus 634 -~--~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-- 708 (1479)
+ ..+....+..|+++|++|+|++. ++++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 464 ~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~ 542 (710)
T TIGR03796 464 PAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIP 542 (710)
T ss_pred cccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEe
Confidence 0 00101123579999999999753 35799999999999999999999999999999999999999999999998
Q ss_pred -----------eEEEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHH
Q 000463 709 -----------TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQ 776 (1479)
Q Consensus 709 -----------~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 776 (1479)
.++||||+|+++++||||||.++.+ .++++..++++.+++.+++..+|.|.+|.+||+|.+|||||||
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQ 622 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQ 622 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHH
Confidence 3899999999999999999998864 6778888999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHH
Q 000463 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALL 856 (1479)
Q Consensus 777 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~ 856 (1479)
||+||||++++|+|+|||||||+||+++++++++.+.+ .++|+|+|||+++.+..||+|++|++|++++.|+++|++
T Consensus 623 RiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll 699 (710)
T TIGR03796 623 RLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELW 699 (710)
T ss_pred HHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHH
Confidence 99999999999999999999999999999999987654 589999999999999999999999999999999999999
Q ss_pred hcCcchHHHH
Q 000463 857 NSGMDFGALV 866 (1479)
Q Consensus 857 ~~~~~f~~l~ 866 (1479)
+.++.|.+++
T Consensus 700 ~~~~~y~~l~ 709 (710)
T TIGR03796 700 AVGGAYARLI 709 (710)
T ss_pred HcCCcHHHHh
Confidence 8888887764
No 37
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=7.6e-65 Score=659.35 Aligned_cols=542 Identities=22% Similarity=0.238 Sum_probs=440.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 317 PVRTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKL 396 (1479)
Q Consensus 317 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 396 (1479)
.+++..++.+++.++...++.++..++..+.|++++.++|.+-.... ...-+.++++++++.++..++.....+...++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (686)
T TIGR03797 125 DLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD-RSLLVQIALALLAAAVGAAAFQLAQSLAVLRL 203 (686)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555566778888888889999999999999999999997653221 12223345555556666667666667778889
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 397 GMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQL--HAVWLMPLQISVALILLYNCLGASVITT 474 (1479)
Q Consensus 397 g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~--~~~w~~plqi~lal~lL~~~lG~s~l~g 474 (1479)
+.++...+...+|+|.++++.....++++|+++|.++ |++.+.+++... ..+...++ +++++++++..-++-+++.
T Consensus 204 ~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~li~ 281 (686)
T TIGR03797 204 ETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIF-ALLNLGLMFYYSWKLALVA 281 (686)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998888899999999997 899998876432 22333333 3344444444434445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 475 VVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGN 554 (1479)
Q Consensus 475 l~~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~ 554 (1479)
++++++.+.+..++.+..++..++.++..+++.+...|.++|+++||.++.|+.+.++.++.-++..+...+........
T Consensus 282 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (686)
T TIGR03797 282 VALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLL 361 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555556667778888899999999999999999999999999999999999988887776555554444443333332
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccc
Q 000463 555 IIVMWSTPVL--ISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNES 632 (1479)
Q Consensus 555 ~~~~~~~p~~--v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~ 632 (1479)
..+......+ +.++.++.+...++.+|.+.++++..++..+..|+..++..+..+.+++++++|+.++++.++..+..
T Consensus 362 ~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 441 (686)
T TIGR03797 362 TVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA 441 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 2222222222 23345666666788899999999999999999999999999999999999999999999865432211
Q ss_pred cccccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----
Q 000463 633 VERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---- 708 (1479)
Q Consensus 633 ~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---- 708 (1479)
. .........|+++|++|+|+++ ++++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.++|
T Consensus 442 ~--~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~ 518 (686)
T TIGR03797 442 K--TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLA 518 (686)
T ss_pred c--CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcC
Confidence 1 1111123479999999999643 36799999999999999999999999999999999999999999999998
Q ss_pred ---------eEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHH
Q 000463 709 ---------TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 779 (1479)
Q Consensus 709 ---------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 779 (1479)
.++||||+|+++++||+|||.+|.+.++++..++++.+++.++++.+|.|.+|.+||+|.+||||||||++
T Consensus 519 ~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRia 598 (686)
T TIGR03797 519 GLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLL 598 (686)
T ss_pred cCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHH
Confidence 38999999999999999999999888888889999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcC
Q 000463 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSG 859 (1479)
Q Consensus 780 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~ 859 (1479)
||||++++|++++||||||+||+++++++++.+.+. ++|+|+|||+++.++.||+|++|++|+|++.|+++|+++++
T Consensus 599 lARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~~ 675 (686)
T TIGR03797 599 IARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMARE 675 (686)
T ss_pred HHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999998776442 68999999999999999999999999999999999999888
Q ss_pred cchHHHHH
Q 000463 860 MDFGALVA 867 (1479)
Q Consensus 860 ~~f~~l~~ 867 (1479)
+.|.++..
T Consensus 676 ~~y~~l~~ 683 (686)
T TIGR03797 676 GLFAQLAR 683 (686)
T ss_pred cHHHHHHH
Confidence 88888764
No 38
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2e-64 Score=635.82 Aligned_cols=546 Identities=22% Similarity=0.287 Sum_probs=450.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 317 PVRTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKL 396 (1479)
Q Consensus 317 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 396 (1479)
+-++..++-||+.+.-..+..++..++.++.|++.+.++|.+--..+ ...=..++.++.+..+++.++...-.+....+
T Consensus 143 ~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~-~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~ 221 (709)
T COG2274 143 SWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS-RSTLTVLAIGLLLAALFEALLRLLRTYLIAHL 221 (709)
T ss_pred HhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555577777777788888999999999999999997754332 22334566677777788888777777778899
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q 000463 397 GMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQI---SVALILLYNCLGASVIT 473 (1479)
Q Consensus 397 g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi---~lal~lL~~~lG~s~l~ 473 (1479)
+.|+...+...+|+|.|+|+...++++++||+++.++ |.++|.++...- +...++.+ ++.+.+++..-+.-+++
T Consensus 222 ~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~--~l~~iiD~~~~~i~l~vm~~ys~~L~li 298 (709)
T COG2274 222 GKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGS--ILTLIIDLLFALIFLAVMFLYSWKLTLI 298 (709)
T ss_pred HHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999986 889998887532 12223332 23333444455556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 474 TVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISG 553 (1479)
Q Consensus 474 gl~~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~ 553 (1479)
+++.+++.+.+..++.+..++.-++.++...++-+...|.++||++||..+-|+.|..+.++.=.+.++.-.+.......
T Consensus 299 ~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~ 378 (709)
T COG2274 299 VLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALI 378 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 67777777777788888899999999999999999999999999999999999999988887777666655554444443
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccc
Q 000463 554 NIIVMWSTPVL--ISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNE 631 (1479)
Q Consensus 554 ~~~~~~~~p~~--v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~ 631 (1479)
..........+ +.+++||++..+++.+|.|..+++-++...+..|+..+.+....+.+++++.+|+.+.++.+..++.
T Consensus 379 ~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~ 458 (709)
T COG2274 379 LNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEG 458 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 33332222222 4567899999999999999999999999999999999999999999999999999999997654332
Q ss_pred ccccccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---
Q 000463 632 SVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--- 708 (1479)
Q Consensus 632 ~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--- 708 (1479)
..........++.|+++|++|.|+.++ .++|+|+||+|++||.+||+|+||||||||+|.|+|.++|++|+|.++|
T Consensus 459 ~~~~~~~~~~~g~I~~~nvsf~y~~~~-~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl 537 (709)
T COG2274 459 DKTLIHLPKLQGEIEFENVSFRYGPDD-PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDL 537 (709)
T ss_pred ccccccccccCceEEEEEEEEEeCCCC-cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeH
Confidence 111111222457899999999998653 4799999999999999999999999999999999999999999999999
Q ss_pred ----------eEEEEeccCcCCCCcHHHHHhcCCCCCh-hhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHH
Q 000463 709 ----------TTAYVAQTSWIQNGTIEENILFGLPMNR-AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQR 777 (1479)
Q Consensus 709 ----------~iayv~Q~~~i~~~Tv~enI~fg~~~~~-~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 777 (1479)
.++||+|++.++++||+|||.+|.|... +...++++..+..+++..+|.|.+|.+||+|.+||||||||
T Consensus 538 ~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQr 617 (709)
T COG2274 538 NDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQR 617 (709)
T ss_pred HhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHH
Confidence 4899999999999999999999988644 33444555557789999999999999999999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHh
Q 000463 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 778 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
++||||++++|+|+||||||||||+++.+.|.+.+. ...+|+|+|+|||++..+..||+|+||++|+|+++|+++|+++
T Consensus 618 lalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~-~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 618 LALARALLSKPKILLLDEATSALDPETEAIILQNLL-QILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred HHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHH-HHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHH
Confidence 999999999999999999999999999999987654 4557899999999999999999999999999999999999999
Q ss_pred cCcchHHHHHH
Q 000463 858 SGMDFGALVAA 868 (1479)
Q Consensus 858 ~~~~f~~l~~~ 868 (1479)
.++.|..+.+.
T Consensus 697 ~~g~y~~l~~~ 707 (709)
T COG2274 697 QGGLYARLYQQ 707 (709)
T ss_pred hcChHHHHHhc
Confidence 98888877643
No 39
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.3e-64 Score=656.49 Aligned_cols=538 Identities=19% Similarity=0.228 Sum_probs=416.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 323 LRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRC 402 (1479)
Q Consensus 323 ~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR~ 402 (1479)
++.+|+.+....++.++..++..+.|+++..++|.+..+..... -...+..+++..++..++.....+.....+.++..
T Consensus 156 ~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 234 (711)
T TIGR00958 156 SGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPA-LASAIFFMCLLSIASSVSAGLRGGSFNYTMARINL 234 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777788888999999999999999999998864332111 00111112222222333322222223344555555
Q ss_pred HHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 403 TLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVGIIGV 481 (1479)
Q Consensus 403 ~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~il~ 481 (1479)
.+...+|+|.++.+....++..+|+++|.++.|++++.+.+. .++.+....+++++++++++..-+.-+++.++.+++.
T Consensus 235 ~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~ 314 (711)
T TIGR00958 235 RIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLV 314 (711)
T ss_pred HHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 566788999999998888889999999999999999987754 5566666666666666655543233333333444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000463 482 MIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWS- 560 (1479)
Q Consensus 482 ~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~- 560 (1479)
..+...+.++.++..++..+..++......|.++|+++||.|++|+.+.++..+..++-.+..++.....+....+...
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (711)
T TIGR00958 315 FLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVL 394 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667777888888888888899999999999999999999999877776655544333222222222211111111
Q ss_pred -HHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccccCC
Q 000463 561 -TPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGC 639 (1479)
Q Consensus 561 -~p~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~ 639 (1479)
.-..+.++.++.+....+.++.+.+++++.++..+..|+..++..+..+.+++++.+||.+|++.++..+......+ .
T Consensus 395 ~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~-~ 473 (711)
T TIGR00958 395 GMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGTLAP-L 473 (711)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCC-C
Confidence 11123344566777778899999999999999999999999999999999999999999999987544322111111 1
Q ss_pred CCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------
Q 000463 640 DDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----------- 708 (1479)
Q Consensus 640 ~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------- 708 (1479)
+....|+++|++|+|++.+++++|+|+||++++||.++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 474 ~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l 553 (711)
T TIGR00958 474 NLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYL 553 (711)
T ss_pred CCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHH
Confidence 123569999999999865456899999999999999999999999999999999999999999999998
Q ss_pred --eEEEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHh
Q 000463 709 --TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1479)
Q Consensus 709 --~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 785 (1479)
+++||||+|+++++||||||.+|.+ .+++...++++.+++.++++.+|.|.+|.+||+|.+||||||||++||||++
T Consensus 554 r~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl 633 (711)
T TIGR00958 554 HRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALV 633 (711)
T ss_pred HhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHh
Confidence 4899999999999999999999965 4567788899999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcchHHH
Q 000463 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGAL 865 (1479)
Q Consensus 786 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l 865 (1479)
++|+|+|||||||+||+++++.+.+ ....+++|+|+|||+++.+..||+|++|++|+|+++|+++|++++++.|.++
T Consensus 634 ~~p~ILILDEpTSaLD~~te~~i~~---~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~~~y~~l 710 (711)
T TIGR00958 634 RKPRVLILDEATSALDAECEQLLQE---SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQGCYKHL 710 (711)
T ss_pred cCCCEEEEEccccccCHHHHHHHHH---hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCCCchHhc
Confidence 9999999999999999999998886 2234789999999999999999999999999999999999999877777654
No 40
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.6e-67 Score=626.30 Aligned_cols=446 Identities=26% Similarity=0.379 Sum_probs=341.4
Q ss_pred ccEEEEeeEEEecCCCC-cccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccC----CcEEEECC---------
Q 000463 643 IAVEVRDGVFSWDDENG-EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKI----SGKVKVCG--------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~----~G~i~~~g--------- 708 (1479)
..++++|++..|..... .++++||||++.+||.+||+|.+||||||+.++|.|..++. +|+|.++|
T Consensus 4 ~lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~ 83 (539)
T COG1123 4 PLLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSER 83 (539)
T ss_pred ceEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHH
Confidence 37899999999976533 25999999999999999999999999999999999999887 89999887
Q ss_pred --------eEEEEeccCc---CCCCcHHHHHhc----CCCCC-hhhHHHHHHHhchHHHHHhcccCCccccccCCCccch
Q 000463 709 --------TTAYVAQTSW---IQNGTIEENILF----GLPMN-RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSG 772 (1479)
Q Consensus 709 --------~iayv~Q~~~---i~~~Tv~enI~f----g~~~~-~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSG 772 (1479)
.|||++|+|+ -+-.||.+-|.= ..... ++..++ + .+-++.....+.......+.+|||
T Consensus 84 ~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~---a---~elL~~Vgl~~~~~~~~yPheLSG 157 (539)
T COG1123 84 EMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKR---A---VELLEQVGLPDPERRDRYPHQLSG 157 (539)
T ss_pred HHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHH---H---HHHHHHcCCCChhhhccCCcccCc
Confidence 3899999985 233577766642 11111 111111 1 122333222221111568899999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEEec
Q 000463 773 GQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1479)
Q Consensus 773 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1479)
||||||.||+||..+|+++|+||||+|||+.++.+|.+.+.+... .|.++|+||||++.+.+ ||+|+||++|++++.|
T Consensus 158 G~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G 237 (539)
T COG1123 158 GMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETG 237 (539)
T ss_pred hHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEec
Confidence 999999999999999999999999999999999999987665543 59999999999999876 8999999999999999
Q ss_pred ChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHHHhc
Q 000463 851 RYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERET 930 (1479)
Q Consensus 851 ~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~ 930 (1479)
+.++++++... +
T Consensus 238 ~~~~i~~~p~h-----------------------------p--------------------------------------- 249 (539)
T COG1123 238 PTEEILSNPQH-----------------------------P--------------------------------------- 249 (539)
T ss_pred CHHHHHhccCC-----------------------------c---------------------------------------
Confidence 99988753110 0
Q ss_pred CcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 000463 931 GKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYF 1010 (1479)
Q Consensus 931 g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~ 1010 (1479)
|..-+.++ .+.....
T Consensus 250 -------YT~~Ll~a-----------------------------------~p~~~~~----------------------- 264 (539)
T COG1123 250 -------YTRGLLAA-----------------------------------VPRLGDE----------------------- 264 (539)
T ss_pred -------ccHHHHhh-----------------------------------CCCcccc-----------------------
Confidence 00000000 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000463 1011 VTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTI 1090 (1479)
Q Consensus 1011 ~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 1090 (1479)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHh
Q 000463 1091 FLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSN 1170 (1479)
Q Consensus 1091 ~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~ 1170 (1479)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchh
Q 000463 1171 EWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAA 1250 (1479)
Q Consensus 1171 ~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~ 1250 (1479)
. + ...+.+
T Consensus 265 --------------------------~----------------------------------------~----~~~~~~-- 272 (539)
T COG1123 265 --------------------------K----------------------------------------I----IRLPRR-- 272 (539)
T ss_pred --------------------------c----------------------------------------c----cccccc--
Confidence 0 0 000000
Q ss_pred ccccCCCCCCCCCCCccEEEEeeeeeecC---------CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC
Q 000463 1251 WKMEDRLPPPNWPAHGNVDLIDLQVRYRS---------NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP 1321 (1479)
Q Consensus 1251 ~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~---------~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p 1321 (1479)
.+. +...-++++|++.+|.. +...+++||||++++||++||||.||||||||.++|+|+++|
T Consensus 273 ------~~~---~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P 343 (539)
T COG1123 273 ------GPL---RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPP 343 (539)
T ss_pred ------ccc---ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 000 01225788999999974 124689999999999999999999999999999999999999
Q ss_pred CccEEEEcCEe--cCCCChhhhhcceEEEcCccccc---cccHhhhcC-CCC---C----CCHHHHHHHHHHcCchH-HH
Q 000463 1322 SGGRIIIDGID--ISLLGLHDLRSRFGIIPQEPVLF---EGTVRSNID-PIG---Q----YSDEEIWKSLERCQLKD-VV 1387 (1479)
Q Consensus 1322 ~~G~I~IDG~d--I~~i~l~~LR~~i~iIpQdp~LF---~gTIR~NLd-p~~---~----~sd~eI~~aL~~~~L~~-~i 1387 (1479)
++|+|.++|.| .+.-....+|+++-+|+|||+-- ..||+++|. |.. . ...+.+.+.+++++|.. +.
T Consensus 344 ~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l 423 (539)
T COG1123 344 SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPEFL 423 (539)
T ss_pred CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHH
Confidence 99999999977 33333556788999999999632 459999995 432 1 12345888899999986 45
Q ss_pred HhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhh
Q 000463 1388 AAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPT 1465 (1479)
Q Consensus 1388 ~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~t 1465 (1479)
.+.|. .||||||||+||||||..+|++||+|||||+||+-+.+.|.+.|.+..+ +.|.|+|+|+++.
T Consensus 424 ~ryP~-----------elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~v 492 (539)
T COG1123 424 DRYPH-----------ELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAV 492 (539)
T ss_pred hcCch-----------hcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHH
Confidence 55553 5799999999999999999999999999999999999999999988654 6899999999999
Q ss_pred hhh-cCEEEEEeCCC
Q 000463 1466 VMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1466 i~~-~DrIlVL~~G~ 1479 (1479)
++. ||||+||++|+
T Consensus 493 V~~i~drv~vm~~G~ 507 (539)
T COG1123 493 VRYIADRVAVMYDGR 507 (539)
T ss_pred HHhhCceEEEEECCe
Confidence 998 99999999996
No 41
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.4e-65 Score=644.61 Aligned_cols=514 Identities=17% Similarity=0.164 Sum_probs=402.7
Q ss_pred HHHHHHHHHHHhhhhhhhcccccccCC-CCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000463 954 VLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFN-PSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSIL 1031 (1479)
Q Consensus 954 ~l~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il 1031 (1479)
.+++.++..++.+..++.+....|... ..... ...++.+++++.++..++.+++.++....+.+....++.+++++++
T Consensus 11 ~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 90 (544)
T TIGR01842 11 VGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASF 90 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344445555566666666655444211 11111 1224445555566677888888999999999999999999999999
Q ss_pred cCCcceecccCchhhHHHHhchhhHhhhhhHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1032 HAPMSFFDTTPSGRILSRASTDQTNIDLFLPF-FVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLST 1110 (1479)
Q Consensus 1032 ~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~ 1110 (1479)
+.|+. ..|..++++.+|++.+...+.. .+..++...+.++ .+++++..+|++.++++..+++.+.+..+..+.
T Consensus 91 ~~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~ 164 (544)
T TIGR01842 91 SATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVGLALLNNRA 164 (544)
T ss_pred cCccc-----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99984 2367789999999999887665 4444444444443 345677788877655443333333333333333
Q ss_pred HHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHH-HH
Q 000463 1111 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCL-AT 1189 (1479)
Q Consensus 1111 ~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~-~~ 1189 (1479)
.+...+......+...+++.|+++|+++||+|+.++.+.+++.+..++..+.................++..+...+ ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (544)
T TIGR01842 165 TKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLG 244 (544)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445566777889999999999999999999999888888777766555443333333322233332222222 22
Q ss_pred HHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEE
Q 000463 1190 LFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVD 1269 (1479)
Q Consensus 1190 ~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~ 1269 (1479)
+.......+.+++|.+...+.|...+..++..+...+..+.....+.+|+.++.+.++|.+. .. +. -+..+.|+
T Consensus 245 ~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~---~~-~~--~~~~~~i~ 318 (544)
T TIGR01842 245 LGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP---AM-PL--PEPEGHLS 318 (544)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC---CC-CC--CCCCCeEE
Confidence 22333457789999988888899999999999999999999999999999999987655321 11 11 12346899
Q ss_pred EEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEc
Q 000463 1270 LIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIP 1349 (1479)
Q Consensus 1270 ~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIp 1349 (1479)
++||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|.+||+|+.+++.+.+|++++++|
T Consensus 319 ~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~ 398 (544)
T TIGR01842 319 VENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLP 398 (544)
T ss_pred EEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEec
Confidence 99999999865567999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccccHhhhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEE
Q 000463 1350 QEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFM 1428 (1479)
Q Consensus 1350 Qdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiL 1428 (1479)
|||.+|++|+||||..++ +++|++++++++.++++++++++|+|+||.++|+|.+||||||||++||||++++|+||||
T Consensus 399 q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ilil 478 (544)
T TIGR01842 399 QDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVL 478 (544)
T ss_pred CCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999998654 4899999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1429 DEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1429 DEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||||+||++|++.|.+.|++.. +++|+|+||||++++..||+|++|++|+
T Consensus 479 DEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~ 530 (544)
T TIGR01842 479 DEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGR 530 (544)
T ss_pred eCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCE
Confidence 99999999999999999999875 6899999999999999999999999995
No 42
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.6e-64 Score=653.86 Aligned_cols=535 Identities=23% Similarity=0.286 Sum_probs=437.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 318 VRTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLG 397 (1479)
Q Consensus 318 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g 397 (1479)
.++..++.+++.+....++.++..++.++.|++++.++|.+-.... ....+.+++++++..++..++.....+...+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (694)
T TIGR03375 137 WFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA-FETLWVLAIGVALAIVFDFVLKTLRSYFLDVAG 215 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455567788888888888899999999999999999997643321 222333444455555566666666666778899
Q ss_pred HHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 398 MLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQ--LHAVWLMPLQISVALILLYNCLGASVITTV 475 (1479)
Q Consensus 398 ~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~--~~~~w~~plqi~lal~lL~~~lG~s~l~gl 475 (1479)
.++...+...+|+|.++++... .+.++|++++.+ .|++.+.+++.. +..+...++ +++.+++++..-++-+++.+
T Consensus 216 ~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~li~l 292 (694)
T TIGR03375 216 KKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPF-ALLFLLVIAIIGGPLVWVPL 292 (694)
T ss_pred HHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHH-HHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999998876 577999999999 799999987643 233333344 33333444443344555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 476 VGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNI 555 (1479)
Q Consensus 476 ~~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~ 555 (1479)
+++++.+.+..++.++.++..++.++..+++.+.+.|.++|+++||.+++|+.+.++..+..++..+...+.....+...
T Consensus 293 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (694)
T TIGR03375 293 VAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLAT 372 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666777888889999999999999999999999999999999999999999998888877776666555544433
Q ss_pred HHHHHHHHH--HHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccc
Q 000463 556 IVMWSTPVL--ISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESV 633 (1479)
Q Consensus 556 ~~~~~~p~~--v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~ 633 (1479)
.+......+ +.++.++.+....+.+|.+.+++++.++..+..|+..++..+..+.+++++++|+.++++.++..+...
T Consensus 373 ~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~ 452 (694)
T TIGR03375 373 NFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGT 452 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 322222222 234567777777889999999999999999999999999999999999999999999998765322111
Q ss_pred ccccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----
Q 000463 634 ERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----- 708 (1479)
Q Consensus 634 ~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----- 708 (1479)
...+.......|+++|++|+|+++ ++++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.++|
T Consensus 453 ~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~ 531 (694)
T TIGR03375 453 RFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQ 531 (694)
T ss_pred CCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhh
Confidence 111111123579999999999643 45799999999999999999999999999999999999999999999998
Q ss_pred --------eEEEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHH
Q 000463 709 --------TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 779 (1479)
Q Consensus 709 --------~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 779 (1479)
.++||||+|+++++||+|||.++.+ .++++..++++.+++.++++.+|.|.+|.+||+|.+||||||||++
T Consensus 532 ~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRla 611 (694)
T TIGR03375 532 IDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVA 611 (694)
T ss_pred CCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHH
Confidence 4899999999999999999999986 6788888999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhc
Q 000463 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 780 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
||||++++|+++|||||||+||+++++++.+.+ ....+++|+|+|||+++.+..||+|++|++|++++.|+++|+++.
T Consensus 612 lARall~~p~iliLDE~Ts~LD~~te~~i~~~l-~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 612 LARALLRDPPILLLDEPTSAMDNRSEERFKDRL-KRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHH-HHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 999999999999999999999999999998754 445578999999999999999999999999999999999998753
No 43
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-66 Score=663.25 Aligned_cols=468 Identities=24% Similarity=0.336 Sum_probs=343.4
Q ss_pred ccEEEEeeEEEecCCC-CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000463 643 IAVEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1479)
..++++|++++|.... ..++|+||||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 4799999999996322 34799999999999999999999999999999999999999999998754
Q ss_pred --------------eEEEEeccC--cC-CCCcHHHHHhcCCCCC-hhhHHHHHHHhchHHHHHhcccCC-ccccccCCCc
Q 000463 709 --------------TTAYVAQTS--WI-QNGTIEENILFGLPMN-RAKYGEVVRVCCLEKDLEMMEYGD-QTEIGERGIN 769 (1479)
Q Consensus 709 --------------~iayv~Q~~--~i-~~~Tv~enI~fg~~~~-~~~~~~v~~~~~l~~dl~~l~~gd-~t~ig~~g~~ 769 (1479)
.+|||+|+| -+ +..||+|||.++.... ....++.. ....+-++.+...+ .........+
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~--~~~~~~l~~~gL~~~~~~~~~~~~~ 168 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAM--VEAKRMLDQVRIPEAQTILSRYPHQ 168 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHH--HHHHHHHHHCCCCChhhHHhCCCcc
Confidence 389999998 34 4579999999863211 00001110 11122344443322 1234677889
Q ss_pred cchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEE
Q 000463 770 LSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIV 847 (1479)
Q Consensus 770 LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~ 847 (1479)
|||||||||+|||||+.+|++|||||||++||+.+++.+.+.+.+...+ |+|+|+||||++++.. ||+|++|++|+++
T Consensus 169 LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~i~ 248 (623)
T PRK10261 169 LSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAV 248 (623)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCeec
Confidence 9999999999999999999999999999999999999998766555444 8999999999999865 8999999999999
Q ss_pred EecChHHHHhcCc-chHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHH
Q 000463 848 QSGRYNALLNSGM-DFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEE 926 (1479)
Q Consensus 848 ~~g~~~~l~~~~~-~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e 926 (1479)
+.|+++++..... .+..
T Consensus 249 ~~g~~~~~~~~~~~~~~~-------------------------------------------------------------- 266 (623)
T PRK10261 249 ETGSVEQIFHAPQHPYTR-------------------------------------------------------------- 266 (623)
T ss_pred ccCCHHHhhcCCCChhhh--------------------------------------------------------------
Confidence 9898876642100 0000
Q ss_pred HHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 000463 927 ERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVV 1006 (1479)
Q Consensus 927 ~~~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~ 1006 (1479)
.++..... +..+.. ..
T Consensus 267 -------------~l~~~~~~------------------------~~~~~~--~~------------------------- 282 (623)
T PRK10261 267 -------------ALLAAVPQ------------------------LGAMKG--LD------------------------- 282 (623)
T ss_pred -------------hhhhccCc------------------------cccccc--cc-------------------------
Confidence 00000000 000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000463 1007 RAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYA 1086 (1479)
Q Consensus 1007 ~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 1086 (1479)
.| +
T Consensus 283 --------------------------~~---------~------------------------------------------ 285 (623)
T PRK10261 283 --------------------------YP---------R------------------------------------------ 285 (623)
T ss_pred --------------------------CC---------c------------------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHH
Q 000463 1087 WPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHN 1166 (1479)
Q Consensus 1087 ~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~ 1166 (1479)
+.|
T Consensus 286 -----------------------------------~~~------------------------------------------ 288 (623)
T PRK10261 286 -----------------------------------RFP------------------------------------------ 288 (623)
T ss_pred -----------------------------------ccc------------------------------------------
Confidence 000
Q ss_pred HhHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCc
Q 000463 1167 NGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIP 1246 (1479)
Q Consensus 1167 ~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~ 1246 (1479)
. .. + ++- .. ..+
T Consensus 289 ------------------------------~--~~---------------------------------~-~~~-~~-~~~ 300 (623)
T PRK10261 289 ------------------------------L--IS---------------------------------L-EHP-AK-QEP 300 (623)
T ss_pred ------------------------------c--cc---------------------------------c-ccc-cc-cCc
Confidence 0 00 0 000 00 000
Q ss_pred cchhccccCCCCCCCCCCCccEEEEeeeeeecCC---------CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhc
Q 000463 1247 SEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSN---------TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFR 1317 (1479)
Q Consensus 1247 ~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~---------~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~r 1317 (1479)
.+.+ .. .+ +...-++++|++++|+.. ...+|+||||+|++||++||+|+||||||||+++|.|
T Consensus 301 ~~~~----~~-~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~G 372 (623)
T PRK10261 301 PIEQ----DT-VV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLR 372 (623)
T ss_pred cccc----cc-cc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHc
Confidence 0000 00 00 011259999999999621 1359999999999999999999999999999999999
Q ss_pred cCCCCccEEEEcCEecCCCChh---hhhcceEEEcCcc--cccc-ccHhhhcCC-C---CCCC----HHHHHHHHHHcCc
Q 000463 1318 LVEPSGGRIIIDGIDISLLGLH---DLRSRFGIIPQEP--VLFE-GTVRSNIDP-I---GQYS----DEEIWKSLERCQL 1383 (1479)
Q Consensus 1318 l~~p~~G~I~IDG~dI~~i~l~---~LR~~i~iIpQdp--~LF~-gTIR~NLdp-~---~~~s----d~eI~~aL~~~~L 1383 (1479)
+.+|++|+|.+||.++...+.. .+|++|++|||+| .++. -||++|+.. . +..+ ++++.++|+.+++
T Consensus 373 l~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL 452 (623)
T PRK10261 373 LVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGL 452 (623)
T ss_pred CCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCC
Confidence 9999999999999999877643 4677899999998 3665 499999852 1 1111 2467788899888
Q ss_pred h-HHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEc
Q 000463 1384 K-DVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIA 1460 (1479)
Q Consensus 1384 ~-~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IA 1460 (1479)
. +.....| ..||||||||++|||||+.+|+||||||||++||..+.+.|.+.|++..+ +.|||+||
T Consensus 453 ~~~~~~~~~-----------~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~is 521 (623)
T PRK10261 453 LPEHAWRYP-----------HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFIS 521 (623)
T ss_pred CHHHhhCCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 5 4444333 35899999999999999999999999999999999999999999988643 68999999
Q ss_pred cChhhhhh-cCEEEEEeCCC
Q 000463 1461 HRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1461 HRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|+++.+.+ ||||+||++|+
T Consensus 522 Hdl~~v~~~~dri~vl~~G~ 541 (623)
T PRK10261 522 HDMAVVERISHRVAVMYLGQ 541 (623)
T ss_pred CCHHHHHHhCCEEEEEECCE
Confidence 99999987 99999999995
No 44
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=3.3e-64 Score=636.63 Aligned_cols=512 Identities=18% Similarity=0.150 Sum_probs=388.3
Q ss_pred HHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000463 955 LLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAP 1034 (1479)
Q Consensus 955 l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p 1034 (1479)
+++.++..+..+..++.++.+.+... ......+..++++.++..++.++..++....+.+....++.++++++++.|
T Consensus 24 ~~~~~~~~~~~~~~~~~i~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~ 100 (555)
T TIGR01194 24 IALGLAGGLAIIALLASINNAIHEEN---FLGQGSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGAP 100 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC---cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33444444455555555555543211 000112233445566667788888888899999999999999999999999
Q ss_pred cceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1035 MSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSREL 1114 (1479)
Q Consensus 1035 ~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l 1114 (1479)
+.||++.++|++++|+++|++.++..+.. +..++...+.+++.++++++.+|.+.++++.++++...+..+..+..++.
T Consensus 101 ~~~~~~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~ 179 (555)
T TIGR01194 101 IEEIDRRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKF 179 (555)
T ss_pred HHHHHhcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988754 66667777777888888889999887765544444333333333333444
Q ss_pred HHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHH--HHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1115 TRLDSITKAPVIHHFSESISGVMTIRAFGKQT--TFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFM 1192 (1479)
Q Consensus 1115 ~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~--~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~ 1192 (1479)
.+......+.+.+++.|.+.|+.+||+|+.++ ...+++.+..+...+................+++..+...+..++.
T Consensus 180 ~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (555)
T TIGR01194 180 FHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLIGCALFAA 259 (555)
T ss_pred HHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556788999999999999999999854 3344444444444333322221111111111222111111111111
Q ss_pred HHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccc--cC-CCC--CCCCCCCcc
Q 000463 1193 ILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKM--ED-RLP--PPNWPAHGN 1267 (1479)
Q Consensus 1193 v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~--~~-~~~--~~~wp~~g~ 1267 (1479)
...+.++.|.+...+.|...+..++..+......++....+.+|+.++.+.+.+++... ++ ... .+.....+.
T Consensus 260 --~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (555)
T TIGR01194 260 --AMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDS 337 (555)
T ss_pred --HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccCCCCce
Confidence 11256788888888888889999999999999999999999999999976432211110 00 000 011123478
Q ss_pred EEEEeeeeeecCC---CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcc
Q 000463 1268 VDLIDLQVRYRSN---TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSR 1344 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~---~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~ 1344 (1479)
|+|+||+|+|++. .+++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++
T Consensus 338 i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~ 417 (555)
T TIGR01194 338 IELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDL 417 (555)
T ss_pred EEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhh
Confidence 9999999999753 2369999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCC
Q 000463 1345 FGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1479)
Q Consensus 1345 i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1424 (1479)
+++|||||.+|++|+|+|+. ++.+++++++++++++++++++.+|+||||. .+|||||||||+||||++++|+
T Consensus 418 i~~v~q~~~lf~~ti~~n~~--~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRall~~~~ 490 (555)
T TIGR01194 418 FSAIFADFHLFDDLIGPDEG--EHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAWLEDRP 490 (555)
T ss_pred CcEEccChhhhhhhhhcccc--cchhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999974 3578999999999999999999999999995 6899999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHH-H-cCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1425 LLFMDEATASVDSQTDAEIQRIIRE-E-FAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1425 ILiLDEaTs~lD~~Te~~Iq~~I~~-~-f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||||||||+||++|++.|++.+.+ . .+++|+|+||||++++..||+|+||++|+
T Consensus 491 ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~ 547 (555)
T TIGR01194 491 ILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGC 547 (555)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCE
Confidence 9999999999999999999887643 2 36899999999999999999999999995
No 45
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=3.5e-63 Score=645.96 Aligned_cols=536 Identities=23% Similarity=0.292 Sum_probs=427.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 322 LLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIR 401 (1479)
Q Consensus 322 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR 401 (1479)
.++.+++.++...++.++..++..+.|++++.++|.+-.... ...-+.+++++++..++..++.....+...+++.++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (708)
T TIGR01193 150 LITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM-MGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQRLS 228 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445567777777888889999999999999999997643321 1122333444455555666666666667778899999
Q ss_pred HHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 402 CTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQL--HAVWLMPLQISVALILLYNCLGASVITTVVGII 479 (1479)
Q Consensus 402 ~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~--~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~i 479 (1479)
..+...+|+|.++++....++.+.|+++|.++ |++++.++.... ..+...+. +++.+.+++..-++-+++.+++++
T Consensus 229 ~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~li~l~~~~ 306 (708)
T TIGR01193 229 IDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWI-LVIVGLFLVRQNMLLFLLSLLSIP 306 (708)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999888899999999998 999998875432 22222333 333333333322233333444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHH
Q 000463 480 GVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYS----ISGNI 555 (1479)
Q Consensus 480 l~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~----~a~~~ 555 (1479)
+.+.+...+.+..++..++.++..+++.+...|.++|+++||.+++|+.+.++.++..++..+.-.+.... .+...
T Consensus 307 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (708)
T TIGR01193 307 VYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKA 386 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555667788888999999999999999999999999999999999998888766655444333332222 22222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccc
Q 000463 556 IVMWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVER 635 (1479)
Q Consensus 556 ~~~~~~p~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~ 635 (1479)
++.... .+.++.++.+....+.+|.+.++++..++..+..|+..+...+..+.+++++.+||.++++.++..+.....
T Consensus 387 ~~~~~~--~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~~ 464 (708)
T TIGR01193 387 VTKLIL--NVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKKR 464 (708)
T ss_pred HHHHHH--HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc
Confidence 222222 234456788888889999999999999999999999999999999999999999999999865432211111
Q ss_pred ccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------
Q 000463 636 VEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------- 708 (1479)
Q Consensus 636 ~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------- 708 (1479)
.+.......|+++|++|+|++ ++++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.++|
T Consensus 465 ~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~ 542 (708)
T TIGR01193 465 TELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDID 542 (708)
T ss_pred cCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHcC
Confidence 111123457999999999963 35799999999999999999999999999999999999999999999998
Q ss_pred ------eEEEEeccCcCCCCcHHHHHhcCC--CCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHH
Q 000463 709 ------TTAYVAQTSWIQNGTIEENILFGL--PMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~--~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1479)
.++||||+|+++++||+|||.+|. ..++++..++++.+++.++++.+|.|.+|.+||+|.+||||||||++|
T Consensus 543 ~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRial 622 (708)
T TIGR01193 543 RHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIAL 622 (708)
T ss_pred HHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHH
Confidence 389999999999999999999983 356677788899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCc
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGM 860 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~ 860 (1479)
|||++++|+++|||||||+||+++++++.+.+.+ . +|+|+|+|||+++.+..||+|++|++|++++.|+++|+++.++
T Consensus 623 ARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~-~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~~~ 700 (708)
T TIGR01193 623 ARALLTDSKVLILDESTSNLDTITEKKIVNNLLN-L-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLDRNG 700 (708)
T ss_pred HHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHH-h-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHhcCC
Confidence 9999999999999999999999999999877654 3 6899999999999999999999999999999999999998888
Q ss_pred chHHHH
Q 000463 861 DFGALV 866 (1479)
Q Consensus 861 ~f~~l~ 866 (1479)
.|.+++
T Consensus 701 ~y~~l~ 706 (708)
T TIGR01193 701 FYASLI 706 (708)
T ss_pred cHHHHh
Confidence 887765
No 46
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=7.4e-63 Score=630.89 Aligned_cols=544 Identities=20% Similarity=0.218 Sum_probs=429.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 320 TTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGML 399 (1479)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~r 399 (1479)
...++.+++.++...+..++..++..+.|++++.+++.+.+++... ....++.++++..++..++.....+...+++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 95 (582)
T PRK11176 17 WPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRS-VLKWMPLVVIGLMILRGITSFISSYCISWVSGK 95 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777777777777888888888999999998765433111 112222223334444555555555566778888
Q ss_pred HHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 400 IRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVGI 478 (1479)
Q Consensus 400 iR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~ 478 (1479)
+...+...+|+|.++++.....+.+.|+++|.++.|++++.+... .+..++..++.+++.+.+++..-++.+++.++++
T Consensus 96 ~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~ 175 (582)
T PRK11176 96 VVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIA 175 (582)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999888889999999999999999988643 4455566666666666665543333344444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 479 IGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVM 558 (1479)
Q Consensus 479 il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~ 558 (1479)
++...+.....++.++..++.++..++......|.++|+++||.|++|+.+.++.++.-++-.+...+.....+....+.
T Consensus 176 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (582)
T PRK11176 176 PIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPII 255 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556677788888888899999999999999999999999999988877776554443333333322222221111
Q ss_pred HHHH--HHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccc
Q 000463 559 WSTP--VLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERV 636 (1479)
Q Consensus 559 ~~~p--~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~ 636 (1479)
.... ..+.++.++.+....+.++.+.+..+++++..+..|+..+...+..+.+++.+++|+.++++.++.++....
T Consensus 256 ~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-- 333 (582)
T PRK11176 256 QLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKR-- 333 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc--
Confidence 1111 122334566666667789999999999999999999999999999999999999999999986644221111
Q ss_pred cCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------
Q 000463 637 EGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------- 709 (1479)
Q Consensus 637 ~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------- 709 (1479)
+.......|+++|++|+|++. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 334 ~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~ 412 (582)
T PRK11176 334 VIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTL 412 (582)
T ss_pred CCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCH
Confidence 111123469999999999643 457999999999999999999999999999999999999999999999983
Q ss_pred ------EEEEeccCcCCCCcHHHHHhcCCC--CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHH
Q 000463 710 ------TAYVAQTSWIQNGTIEENILFGLP--MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1479)
Q Consensus 710 ------iayv~Q~~~i~~~Tv~enI~fg~~--~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1479)
++|+||+|.++++||+|||.+|.+ .++++.+++++.+++.++++.+|+|.+|.+||+|.+||||||||++||
T Consensus 413 ~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LA 492 (582)
T PRK11176 413 ASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIA 492 (582)
T ss_pred HHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHH
Confidence 799999999999999999999864 677888899999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcc
Q 000463 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMD 861 (1479)
Q Consensus 782 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~ 861 (1479)
||++++|+|+|||||||+||+++++.+++.+.+ ..+++|+|+|||+++.++.||+|++|++|++++.|+++++++.++.
T Consensus 493 Rall~~~~ililDEptsaLD~~t~~~i~~~l~~-~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~~~ 571 (582)
T PRK11176 493 RALLRDSPILILDEATSALDTESERAIQAALDE-LQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQNGV 571 (582)
T ss_pred HHHHhCCCEEEEECccccCCHHHHHHHHHHHHH-HhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCh
Confidence 999999999999999999999999999876544 4568999999999999999999999999999999999999998888
Q ss_pred hHHHHHH
Q 000463 862 FGALVAA 868 (1479)
Q Consensus 862 f~~l~~~ 868 (1479)
|.++...
T Consensus 572 y~~l~~~ 578 (582)
T PRK11176 572 YAQLHKM 578 (582)
T ss_pred HHHHHHH
Confidence 9887653
No 47
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=8.1e-63 Score=629.75 Aligned_cols=543 Identities=21% Similarity=0.243 Sum_probs=439.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 320 TTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGML 399 (1479)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~r 399 (1479)
..+++.+++.++++.++.++..++....|++++.+++..-.... ...-+.+++++++..++..++.....+...+.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 84 (571)
T TIGR02203 6 WSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD-RSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNK 84 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788889999999999999999999999999886543221 11112223334444455555555555667788888
Q ss_pred HHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 400 IRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVGI 478 (1479)
Q Consensus 400 iR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~ 478 (1479)
+...+...+|+|.++.+.....+.+.|+++|.++.|++++.++.. .+..++...+.+++++.+++..=++-+++.++++
T Consensus 85 ~~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~ 164 (571)
T TIGR02203 85 VVRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVML 164 (571)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 888899999999999999888889999999999999999998764 4555555555566666655543333334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 479 IGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVM 558 (1479)
Q Consensus 479 il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~ 558 (1479)
++.+.+..+..++.++..++..+..+++.+..+|.++|+++||.++.|+.+.++.++..++..+...+.....+....+.
T Consensus 165 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (571)
T TIGR02203 165 PVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPIT 244 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555667778888899999999999999999999999999999999999888887777665555444433333332222
Q ss_pred HHHHH--HHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccc
Q 000463 559 WSTPV--LISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERV 636 (1479)
Q Consensus 559 ~~~p~--~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~ 636 (1479)
..... .+.++.++.+....+.+|++.+++++.++..+..|+..+...+..+.+++++.+|+.++++.++..+....
T Consensus 245 ~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~-- 322 (571)
T TIGR02203 245 QLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTR-- 322 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC--
Confidence 22222 22344566676778899999999999999999999999999999999999999999999986554322111
Q ss_pred cCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------
Q 000463 637 EGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------- 708 (1479)
Q Consensus 637 ~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------- 708 (1479)
+....+..|+++|++|+|++. ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 323 ~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~ 401 (571)
T TIGR02203 323 AIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTL 401 (571)
T ss_pred CCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCH
Confidence 111123469999999999754 45799999999999999999999999999999999999999999999998
Q ss_pred -----eEEEEeccCcCCCCcHHHHHhcCCC--CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHH
Q 000463 709 -----TTAYVAQTSWIQNGTIEENILFGLP--MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1479)
Q Consensus 709 -----~iayv~Q~~~i~~~Tv~enI~fg~~--~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1479)
.++||||+|++|++|++|||.++.+ .++++..++++.|++.+++..+|+|.+|.+|++|.+||||||||++||
T Consensus 402 ~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLA 481 (571)
T TIGR02203 402 ASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIA 481 (571)
T ss_pred HHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHH
Confidence 3799999999999999999999964 778889999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcc
Q 000463 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMD 861 (1479)
Q Consensus 782 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~ 861 (1479)
||++++|+|++||||||+||+++++++++.+. ...+++|+|+|||+.+.++.||+|++|++|++++.|+++++++.++.
T Consensus 482 Rall~~~~illLDEpts~LD~~~~~~i~~~L~-~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~~~ 560 (571)
T TIGR02203 482 RALLKDAPILILDEATSALDNESERLVQAALE-RLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARNGL 560 (571)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHH-HHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcCCH
Confidence 99999999999999999999999999987654 44578999999999999999999999999999999999999987777
Q ss_pred hHHHHH
Q 000463 862 FGALVA 867 (1479)
Q Consensus 862 f~~l~~ 867 (1479)
|.++..
T Consensus 561 ~~~~~~ 566 (571)
T TIGR02203 561 YAQLHN 566 (571)
T ss_pred HHHHHH
Confidence 776544
No 48
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.2e-64 Score=686.95 Aligned_cols=487 Identities=17% Similarity=0.226 Sum_probs=395.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHH
Q 000463 988 LFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGI 1067 (1479)
Q Consensus 988 ~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~ 1067 (1479)
.+...+++++++..++.+++.++....+.+...+++.+++++++++|++|||..+.|++.+|++.|++.+...+...+..
T Consensus 98 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~ 177 (1466)
T PTZ00265 98 DIIFSLVLIGIFQFILSFISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFIT 177 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566677788888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHH
Q 000463 1068 TVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTT 1147 (1479)
Q Consensus 1068 ~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~ 1147 (1479)
++..++.+++.++++++.+|.+.++++.++++++.+..++.+..+...+......+...+.+.|+++|+++||+|+.|++
T Consensus 178 ~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~ 257 (1466)
T PTZ00265 178 IFTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKT 257 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHH
Confidence 99999999999999999999988776655555555555555555555555556667788999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHHHHH-HHhcc--------CCcChhHHHHHHHHHHHHHHH
Q 000463 1148 FYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFM-ILLPS--------SIIKPENVGLSLSYGLSLNGV 1218 (1479)
Q Consensus 1148 f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~-v~~~~--------~~~~~g~vgl~l~y~~~l~~~ 1218 (1479)
+.+++.+..+...+..........+......++..+..+++.++. ..... +.+++|.+...+.+.+.....
T Consensus 258 ~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~ 337 (1466)
T PTZ00265 258 ILKKFNLSEKLYSKYILKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFM 337 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHH
Confidence 999988777766665544433332222222222222222222221 11222 134444443333333333333
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCC-CcceeeeeEEEeCCcE
Q 000463 1219 LFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNT-PLVLKGITLSIHGGEK 1297 (1479)
Q Consensus 1219 l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~-~~vL~~is~~I~~Gek 1297 (1479)
+..+...+..+.....|.+|+.+.++.+++.+.. .+ ....|..+.|+|+||+|+|+... .++|+|+||+|++||+
T Consensus 338 l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~-~~---~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~ 413 (1466)
T PTZ00265 338 LTIILPNITEYMKSLEATNSLYEIINRKPLVENN-DD---GKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKT 413 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC-CC---CccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCE
Confidence 4445556778889999999999999876653211 11 11123345899999999997532 3699999999999999
Q ss_pred EEEECCCCCCHHHHHHHHhccCCCCccEEEE-cCEecCCCChhhhhcceEEEcCccccccccHhhhcCCCC---------
Q 000463 1298 IGVVGRTGSGKSTLIQVFFRLVEPSGGRIII-DGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG--------- 1367 (1479)
Q Consensus 1298 vgIVGrTGSGKSTLl~~L~rl~~p~~G~I~I-DG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~--------- 1367 (1479)
+||||+||||||||+++|.|+|+|++|+|++ ||.|+++++++++|++|++|||+|.||++||++||....
T Consensus 414 vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~ 493 (1466)
T PTZ00265 414 YAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEAL 493 (1466)
T ss_pred EEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchh
Confidence 9999999999999999999999999999999 679999999999999999999999999999999996421
Q ss_pred -------------------------------------------------CCCHHHHHHHHHHcCchHHHHhCcCCccccc
Q 000463 1368 -------------------------------------------------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLV 1398 (1479)
Q Consensus 1368 -------------------------------------------------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v 1398 (1479)
+.+|+++++|++++++++++.++|+||||.+
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~v 573 (1466)
T PTZ00265 494 SNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLV 573 (1466)
T ss_pred ccccccccccccccccccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCcee
Confidence 3578999999999999999999999999999
Q ss_pred cCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhhcCEEEEEe
Q 000463 1399 ADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMDCDRVIVVD 1476 (1479)
Q Consensus 1399 ~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~~DrIlVL~ 1476 (1479)
+++|.+||||||||++|||||+++|+|||||||||+||+++++.|++.|++.. +++|+|+||||++++..||+|+||+
T Consensus 574 g~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~ 653 (1466)
T PTZ00265 574 GSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLS 653 (1466)
T ss_pred CCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999875 4899999999999999999999999
Q ss_pred CC
Q 000463 1477 AG 1478 (1479)
Q Consensus 1477 ~G 1478 (1479)
+|
T Consensus 654 ~g 655 (1466)
T PTZ00265 654 NR 655 (1466)
T ss_pred CC
Confidence 97
No 49
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=8.9e-66 Score=648.35 Aligned_cols=438 Identities=25% Similarity=0.407 Sum_probs=335.1
Q ss_pred cEEEEeeEEEecCC-CCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC---------
Q 000463 644 AVEVRDGVFSWDDE-NGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG--------- 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~-~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g--------- 708 (1479)
.++++|++++|+.. ..+++|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 68999999999632 135799999999999999999999999999999999999986 799998865
Q ss_pred --------eEEEEeccCc--C-CCCcHHHHHhcCCC----CChhhHHHHHHHhchHHHHHhcccCCc-cccccCCCccch
Q 000463 709 --------TTAYVAQTSW--I-QNGTIEENILFGLP----MNRAKYGEVVRVCCLEKDLEMMEYGDQ-TEIGERGINLSG 772 (1479)
Q Consensus 709 --------~iayv~Q~~~--i-~~~Tv~enI~fg~~----~~~~~~~~v~~~~~l~~dl~~l~~gd~-t~ig~~g~~LSG 772 (1479)
.++|++|++. + ...|+++|+.++.. ......+ ....+-++.+...+. .....+..+|||
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~~~~LSg 159 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAAR-----GEILNCLDRVGIRQAAKRLTDYPHQLSG 159 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHCCCCChHHHHhhCCcccCH
Confidence 3799999974 3 34699999875321 1111110 112223343333221 123567889999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEec
Q 000463 773 GQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1479)
Q Consensus 773 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1479)
||||||+|||||+.+|+++||||||++||+..++.+.+.+.+...+ |+|+|+|||+++++.. ||+|++|++|++++.|
T Consensus 160 Ge~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g 239 (529)
T PRK15134 160 GERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVEQN 239 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEEeC
Confidence 9999999999999999999999999999999999998766555444 8999999999999865 8999999999999888
Q ss_pred ChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHHHhc
Q 000463 851 RYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERET 930 (1479)
Q Consensus 851 ~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~ 930 (1479)
+++++..... . .
T Consensus 240 ~~~~~~~~~~-----------------------------------------------------~------~--------- 251 (529)
T PRK15134 240 RAATLFSAPT-----------------------------------------------------H------P--------- 251 (529)
T ss_pred CHHHHhhCCC-----------------------------------------------------C------H---------
Confidence 7655421000 0 0
Q ss_pred CcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 000463 931 GKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYF 1010 (1479)
Q Consensus 931 g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~ 1010 (1479)
+....
T Consensus 252 ----------~~~~~----------------------------------------------------------------- 256 (529)
T PRK15134 252 ----------YTQKL----------------------------------------------------------------- 256 (529)
T ss_pred ----------HHHHH-----------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000463 1011 VTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTI 1090 (1479)
Q Consensus 1011 ~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 1090 (1479)
++
T Consensus 257 ----------------~~-------------------------------------------------------------- 258 (529)
T PRK15134 257 ----------------LN-------------------------------------------------------------- 258 (529)
T ss_pred ----------------HH--------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHh
Q 000463 1091 FLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSN 1170 (1479)
Q Consensus 1091 ~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~ 1170 (1479)
..+
T Consensus 259 -------------------------------~~~---------------------------------------------- 261 (529)
T PRK15134 259 -------------------------------SEP---------------------------------------------- 261 (529)
T ss_pred -------------------------------hCc----------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchh
Q 000463 1171 EWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAA 1250 (1479)
Q Consensus 1171 ~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~ 1250 (1479)
+ .++..+
T Consensus 262 -------------------------------------------------------------------~------~~~~~~ 268 (529)
T PRK15134 262 -------------------------------------------------------------------S------GDPVPL 268 (529)
T ss_pred -------------------------------------------------------------------c------cccccc
Confidence 0 000000
Q ss_pred ccccCCCCCCCCCCCccEEEEeeeeeecC---------CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC
Q 000463 1251 WKMEDRLPPPNWPAHGNVDLIDLQVRYRS---------NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP 1321 (1479)
Q Consensus 1251 ~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~---------~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p 1321 (1479)
++. ...-++++|++++|+. +...+|+|+||+|++||++||+|+||||||||+++|.|++ |
T Consensus 269 -------~~~---~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~-~ 337 (529)
T PRK15134 269 -------PEP---ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLI-N 337 (529)
T ss_pred -------CCC---CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcC-C
Confidence 000 0114899999999952 1245999999999999999999999999999999999998 4
Q ss_pred CccEEEEcCEecCCCChhh---hhcceEEEcCcc--ccccc-cHhhhcCCC---C--CCC----HHHHHHHHHHcCch-H
Q 000463 1322 SGGRIIIDGIDISLLGLHD---LRSRFGIIPQEP--VLFEG-TVRSNIDPI---G--QYS----DEEIWKSLERCQLK-D 1385 (1479)
Q Consensus 1322 ~~G~I~IDG~dI~~i~l~~---LR~~i~iIpQdp--~LF~g-TIR~NLdp~---~--~~s----d~eI~~aL~~~~L~-~ 1385 (1479)
++|+|.+||.++...+.++ +|++++++||+| .+|.. |+++|+... . ..+ ++++.++++..++. +
T Consensus 338 ~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 417 (529)
T PRK15134 338 SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDPE 417 (529)
T ss_pred CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCHH
Confidence 8999999999998776544 477899999998 36654 999999531 1 111 34577888888885 3
Q ss_pred HHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccCh
Q 000463 1386 VVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRI 1463 (1479)
Q Consensus 1386 ~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl 1463 (1479)
.....| .+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||++
T Consensus 418 ~~~~~~-----------~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~ 486 (529)
T PRK15134 418 TRHRYP-----------AEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDL 486 (529)
T ss_pred HHhcCC-----------ccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCH
Confidence 333322 36899999999999999999999999999999999999999999998643 78999999999
Q ss_pred hhhhh-cCEEEEEeCCC
Q 000463 1464 PTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1464 ~ti~~-~DrIlVL~~G~ 1479 (1479)
+.+.. ||||++|++|+
T Consensus 487 ~~~~~~~d~i~~l~~G~ 503 (529)
T PRK15134 487 HVVRALCHQVIVLRQGE 503 (529)
T ss_pred HHHHHhcCeEEEEECCE
Confidence 99986 99999999995
No 50
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.7e-66 Score=581.58 Aligned_cols=469 Identities=22% Similarity=0.342 Sum_probs=390.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHH-HHHHH
Q 000463 1007 RAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFI-ITCQY 1085 (1479)
Q Consensus 1007 ~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~-v~~~~ 1085 (1479)
|..++...+..+-+.+--+.|.|+.+..+.|.-+..+|-+..-......-|+..+...+...+-..+-+....+ ....+
T Consensus 2 r~~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~ 81 (497)
T COG5265 2 RDRLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVY 81 (497)
T ss_pred chHhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 34456677788888888899999999999999988777665444444444555555555555444444433333 33456
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHH
Q 000463 1086 AWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFH 1165 (1479)
Q Consensus 1086 ~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~ 1165 (1479)
+|++..+.+..+++|.++.-.-....-..+|....+.+..++.-.+++-+-.|+|.|+.|+.+..++.+.++.+.++...
T Consensus 82 ~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k 161 (497)
T COG5265 82 GWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIK 161 (497)
T ss_pred ccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHH
Confidence 78887777766666655543333333344555555566667778899999999999999999999999999999998888
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHH-HHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhc
Q 000463 1166 NNGSNEWLGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTE 1244 (1479)
Q Consensus 1166 ~~~~~~wl~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~ 1244 (1479)
...+-.||.+.-..+........... ...+..+.++.|..-..-.|..+++.+++.+...+.++.+.....|+..+..+
T Consensus 162 ~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~ 241 (497)
T COG5265 162 VHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLD 241 (497)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhc
Confidence 77777788776655544333222221 22334678889999999999999999999999999999999999999999988
Q ss_pred CccchhccccCCCCCCCCC-CCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCc
Q 000463 1245 IPSEAAWKMEDRLPPPNWP-AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSG 1323 (1479)
Q Consensus 1245 ~~~E~~~~~~~~~~~~~wp-~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~ 1323 (1479)
.+.|... ....++-|| ..|.|.|+||+|.|.++.| +|+|+||++++|+++||||++|+||||+.++|+|+|++++
T Consensus 242 ~~~~v~d---~pda~~L~~~~~g~v~F~~V~F~y~~~r~-iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~s 317 (497)
T COG5265 242 VEAEVSD---APDAPPLWPVRLGAVAFINVSFAYDPRRP-ILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNS 317 (497)
T ss_pred cchhhcc---CCCCccccccccceEEEEEEEeeccccch-hhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcC
Confidence 7766432 233455674 4688999999999998765 9999999999999999999999999999999999999999
Q ss_pred cEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCC
Q 000463 1324 GRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSG 1402 (1479)
Q Consensus 1324 G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1402 (1479)
|.|.|||+||..+..+.||+.||+||||.+||++|+..|+...+ ..+++|++.|++.++++++|+.+|+||||.|||.|
T Consensus 318 G~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerg 397 (497)
T COG5265 318 GSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERG 397 (497)
T ss_pred ceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhe
Confidence 99999999999999999999999999999999999999998654 68999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1403 DNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1403 ~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
-.||||||||+++||++||+|+||+||||||+||..||+.||.+|++..+++|.++|||||+||.++|.|+||++|+
T Consensus 398 lklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~ 474 (497)
T COG5265 398 LKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGR 474 (497)
T ss_pred eeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999995
No 51
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-65 Score=643.83 Aligned_cols=436 Identities=21% Similarity=0.344 Sum_probs=333.5
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------e
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------T 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~ 709 (1479)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| .
T Consensus 5 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFG---PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 589999999995 34699999999999999999999999999999999999999999999987 2
Q ss_pred EEEEeccCcCC-CCcHHHHHhcCCCCC----h-h--hHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHH
Q 000463 710 TAYVAQTSWIQ-NGTIEENILFGLPMN----R-A--KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1479)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~~~----~-~--~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1479)
++|++|++.++ +.|++||+.++.... . . ...+..+ ...+-++.+... .....+..+|||||||||+||
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~gl~--~~~~~~~~~LSgG~~qrv~ia 157 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRV--RAAMMLLRVGLK--VDLDEKVANLSISHKQMLEIA 157 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHH--HHHHHHHHcCCC--CCcccchhhCCHHHHHHHHHH
Confidence 79999998665 469999998864210 0 0 0111111 112223333322 224567789999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhcCc
Q 000463 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGM 860 (1479)
Q Consensus 782 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~ 860 (1479)
||++.+|+++||||||++||+.+++.+.+.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+++++...
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~-- 235 (510)
T PRK09700 158 KTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSND-- 235 (510)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCHH--
Confidence 99999999999999999999999999987666655568999999999999875 899999999999887765432100
Q ss_pred chHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHHHhcCcchHHHHHH
Q 000463 861 DFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKI 940 (1479)
Q Consensus 861 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~ 940 (1479)
+..
T Consensus 236 ---~~~-------------------------------------------------------------------------- 238 (510)
T PRK09700 236 ---DIV-------------------------------------------------------------------------- 238 (510)
T ss_pred ---HHH--------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 941 YCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQ 1020 (1479)
Q Consensus 941 y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~ 1020 (1479)
....+. ..
T Consensus 239 --~~~~~~--------------------------~~-------------------------------------------- 246 (510)
T PRK09700 239 --RLMVGR--------------------------EL-------------------------------------------- 246 (510)
T ss_pred --HHhcCC--------------------------Cc--------------------------------------------
Confidence 000000 00
Q ss_pred HHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000463 1021 IFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWAN 1100 (1479)
Q Consensus 1021 ~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~ 1100 (1479)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK09700 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHH
Q 000463 1101 YWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELL 1180 (1479)
Q Consensus 1101 ~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l 1180 (1479)
.
T Consensus 247 ---------------------~---------------------------------------------------------- 247 (510)
T PRK09700 247 ---------------------Q---------------------------------------------------------- 247 (510)
T ss_pred ---------------------c----------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCC
Q 000463 1181 GSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPP 1260 (1479)
Q Consensus 1181 ~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~ 1260 (1479)
. + +...++.. .++
T Consensus 248 ---------------~-----------------------------------------~---~~~~~~~~-------~~~- 260 (510)
T PRK09700 248 ---------------N-----------------------------------------R---FNAMKENV-------SNL- 260 (510)
T ss_pred ---------------c-----------------------------------------c---cccccccc-------ccC-
Confidence 0 0 00000000 000
Q ss_pred CCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCCh-h
Q 000463 1261 NWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL-H 1339 (1479)
Q Consensus 1261 ~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l-~ 1339 (1479)
+....++++|++++|. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +
T Consensus 261 --~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~ 334 (510)
T PRK09700 261 --AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLD 334 (510)
T ss_pred --CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHHH
Confidence 0112599999999763 28999999999999999999999999999999999999999999999999876543 4
Q ss_pred hhhcceEEEcCcc---ccccc-cHhhhcCCCCC------------CC----HHHHHHHHHHcCchHHHHhCcCCcccccc
Q 000463 1340 DLRSRFGIIPQEP---VLFEG-TVRSNIDPIGQ------------YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVA 1399 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp---~LF~g-TIR~NLdp~~~------------~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~ 1399 (1479)
.+|++++|+||++ .+|.+ |+++|+..... .+ .+++.+++++.++.. +..+.++
T Consensus 335 ~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~- 407 (510)
T PRK09700 335 AVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKC------HSVNQNI- 407 (510)
T ss_pred HHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCC------CCccCcc-
Confidence 5678899999984 57765 99999863211 01 134566777776631 1233333
Q ss_pred CCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeC
Q 000463 1400 DSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDA 1477 (1479)
Q Consensus 1400 e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~ 1477 (1479)
..||||||||++|||||+++|+||||||||++||..+.+.+.+.|++.. ++.|||+|||+++.+.. ||||++|++
T Consensus 408 ---~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~ 484 (510)
T PRK09700 408 ---TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCE 484 (510)
T ss_pred ---ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEEC
Confidence 3599999999999999999999999999999999999999999998763 47899999999998876 999999999
Q ss_pred CC
Q 000463 1478 GL 1479 (1479)
Q Consensus 1478 G~ 1479 (1479)
|+
T Consensus 485 G~ 486 (510)
T PRK09700 485 GR 486 (510)
T ss_pred CE
Confidence 85
No 52
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.2e-64 Score=685.29 Aligned_cols=239 Identities=21% Similarity=0.343 Sum_probs=194.1
Q ss_pred HHHHHHHhhhHHHHHHhh--cCccchhccccCCCCCCCCCCCc--cEEEEeeeeeec--CCCCcceeeeeEEEeCCcEEE
Q 000463 1226 SCFVENRMVSVERIKQFT--EIPSEAAWKMEDRLPPPNWPAHG--NVDLIDLQVRYR--SNTPLVLKGITLSIHGGEKIG 1299 (1479)
Q Consensus 1226 ~~~~e~~~~sveRi~~~~--~~~~E~~~~~~~~~~~~~wp~~g--~I~~~nvs~~Y~--~~~~~vL~~is~~I~~Gekvg 1299 (1479)
..+.|+.+.++||..+|. +.+.|.+.......++. ..| .++++|++++|+ ++.+.+|+|||++|+|||++|
T Consensus 717 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 793 (1394)
T TIGR00956 717 GETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEK---ESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTA 793 (1394)
T ss_pred ccccccccccccccccCCCCccccccccccccccccc---cCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEE
Confidence 345677788999998763 34444332221111221 134 479999999985 334579999999999999999
Q ss_pred EECCCCCCHHHHHHHHhccCC---CCccEEEEcCEecCCCChhhhhcceEEEcCccc-cccccHhhhcCCC------CCC
Q 000463 1300 VVGRTGSGKSTLIQVFFRLVE---PSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPV-LFEGTVRSNIDPI------GQY 1369 (1479)
Q Consensus 1300 IVGrTGSGKSTLl~~L~rl~~---p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~-LF~gTIR~NLdp~------~~~ 1369 (1479)
|+||||||||||+++|.|+.+ |++|+|.+||.++. .++|+++++|||++. ++..||||||+.. .+.
T Consensus 794 I~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~ 869 (1394)
T TIGR00956 794 LMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSV 869 (1394)
T ss_pred EECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCC
Confidence 999999999999999999998 78999999999985 357899999999976 4567999999731 123
Q ss_pred CHH----HHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCC-EEEEeCCCCCCCHHhHHHHH
Q 000463 1370 SDE----EIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR-LLFMDEATASVDSQTDAEIQ 1444 (1479)
Q Consensus 1370 sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~-ILiLDEaTs~lD~~Te~~Iq 1444 (1479)
+++ .+.++++..++.+ -.|+.+++.|.+||||||||++|||||+++|+ ||+||||||+||..+...|+
T Consensus 870 ~~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~ 942 (1394)
T TIGR00956 870 SKSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSIC 942 (1394)
T ss_pred CHHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHH
Confidence 443 4567788877754 36889998888999999999999999999997 99999999999999999999
Q ss_pred HHHHHH-cCCcEEEEEccChhhh--hhcCEEEEEeCC
Q 000463 1445 RIIREE-FAACTIISIAHRIPTV--MDCDRVIVVDAG 1478 (1479)
Q Consensus 1445 ~~I~~~-f~~~TvI~IAHRl~ti--~~~DrIlVL~~G 1478 (1479)
+.|++. .+++|||+++|++++. ..||+|++|++|
T Consensus 943 ~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~G 979 (1394)
T TIGR00956 943 KLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKG 979 (1394)
T ss_pred HHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCC
Confidence 999987 4689999999999974 459999999987
No 53
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-65 Score=642.57 Aligned_cols=436 Identities=21% Similarity=0.362 Sum_probs=334.0
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc--CCcEEEECCe------------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK--ISGKVKVCGT------------ 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~--~~G~i~~~g~------------ 709 (1479)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|.
T Consensus 5 ~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFG---GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeC---CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 589999999995 34799999999999999999999999999999999999986 8999999872
Q ss_pred --EEEEeccCcCC-CCcHHHHHhcCCCCC---hhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHH
Q 000463 710 --TAYVAQTSWIQ-NGTIEENILFGLPMN---RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1479)
Q Consensus 710 --iayv~Q~~~i~-~~Tv~enI~fg~~~~---~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 783 (1479)
++|++|++.++ +.|++||+.++.... ....++..+ ...+-++.+... .....+..+|||||||||+||||
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~--~~~~~~~~~LSgGqkqrv~la~a 157 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL--RAQKLLAQLKLD--INPATPVGNLGLGQQQLVEIAKA 157 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH--HHHHHHHHcCCC--CCcccchhhCCHHHHHHHHHHHH
Confidence 79999998665 569999999875321 001111111 122234444332 23456778999999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhcCcch
Q 000463 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGMDF 862 (1479)
Q Consensus 784 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f 862 (1479)
++.+|+++||||||++||+..+..+++.+.+...+|+|+|++||+++++.. ||++++|++|+++..|+.+++..
T Consensus 158 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~----- 232 (506)
T PRK13549 158 LNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTE----- 232 (506)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCH-----
Confidence 999999999999999999999999987666555568999999999999875 89999999999987654321100
Q ss_pred HHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHHHhcCcchHHHHHHHH
Q 000463 863 GALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYC 942 (1479)
Q Consensus 863 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~ 942 (1479)
++ ..
T Consensus 233 ---------------------------------------------------------------~~-------------~~ 236 (506)
T PRK13549 233 ---------------------------------------------------------------DD-------------II 236 (506)
T ss_pred ---------------------------------------------------------------HH-------------HH
Confidence 00 00
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 943 TEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIF 1022 (1479)
Q Consensus 943 ~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l 1022 (1479)
....+ .
T Consensus 237 ~~~~~--------------------------------~------------------------------------------ 242 (506)
T PRK13549 237 TMMVG--------------------------------R------------------------------------------ 242 (506)
T ss_pred HHhhC--------------------------------c------------------------------------------
Confidence 00000 0
Q ss_pred HHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000463 1023 FSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYW 1102 (1479)
Q Consensus 1023 ~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~ 1102 (1479)
+
T Consensus 243 -----------~-------------------------------------------------------------------- 243 (506)
T PRK13549 243 -----------E-------------------------------------------------------------------- 243 (506)
T ss_pred -----------C--------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHH
Q 000463 1103 YRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGS 1182 (1479)
Q Consensus 1103 ~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~ 1182 (1479)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCC
Q 000463 1183 FTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNW 1262 (1479)
Q Consensus 1183 ~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~w 1262 (1479)
.. + . .|.+. ++
T Consensus 244 -----------------~~------------------------------------~---~--~~~~~--------~~--- 254 (506)
T PRK13549 244 -----------------LT------------------------------------A---L--YPREP--------HT--- 254 (506)
T ss_pred -----------------cc------------------------------------c---c--ccccc--------cC---
Confidence 00 0 0 00000 00
Q ss_pred CCCccEEEEeeeeeecC-CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC-CCccEEEEcCEecCCCCh-h
Q 000463 1263 PAHGNVDLIDLQVRYRS-NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-PSGGRIIIDGIDISLLGL-H 1339 (1479)
Q Consensus 1263 p~~g~I~~~nvs~~Y~~-~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-p~~G~I~IDG~dI~~i~l-~ 1339 (1479)
+....++++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+. +
T Consensus 255 ~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~ 334 (506)
T PRK13549 255 IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQ 334 (506)
T ss_pred CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHH
Confidence 01124899999999953 22459999999999999999999999999999999999999 599999999999875543 3
Q ss_pred hhhcceEEEcCcc---cccc-ccHhhhcCCC--CC------CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCC
Q 000463 1340 DLRSRFGIIPQEP---VLFE-GTVRSNIDPI--GQ------YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGD 1403 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp---~LF~-gTIR~NLdp~--~~------~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~ 1403 (1479)
..|++++++||+| .+|. .|+.+|+... .. .+ .+++.++++++++.+ ...|..+ .
T Consensus 335 ~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~ 404 (506)
T PRK13549 335 AIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKT------ASPELAI----A 404 (506)
T ss_pred HHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccC------CCccccc----c
Confidence 4577899999997 3565 5999999631 11 12 134667777776631 1123333 4
Q ss_pred CCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1404 NWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1404 nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
.||||||||++||||++++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||||++|++|+
T Consensus 405 ~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~ 482 (506)
T PRK13549 405 RLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGK 482 (506)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999998764 47899999999999977 99999999995
No 54
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=6.1e-62 Score=621.99 Aligned_cols=547 Identities=20% Similarity=0.250 Sum_probs=424.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 319 RTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGM 398 (1479)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~ 398 (1479)
++..++.+++.+.+..++.++..++..+.|+++..+++.+-....... -..++..+++..++..+......+...+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (576)
T TIGR02204 9 LWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGL-LNRYFAFLLVVALVLALGTAARFYLVTWLGE 87 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556667778888888899999999999999999997432221111 1122222333334444455555667778999
Q ss_pred HHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 399 LIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVG 477 (1479)
Q Consensus 399 riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~ 477 (1479)
++...+...+|+|.++++.....+.+.|+++|.++.|++++.+++. .+..++...+.+++++++++..-.+.+++.++.
T Consensus 88 ~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 167 (576)
T TIGR02204 88 RVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLA 167 (576)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999998887888999999999999999988753 344444444444444443332222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 478 IIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIV 557 (1479)
Q Consensus 478 ~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~ 557 (1479)
+++.+.+..+..+..++..++.++.++++.+...|.++|+++||.+++|+.+.++..+..++..+..++.....+....+
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (576)
T TIGR02204 168 VPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAI 247 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222333456777888888999999999999999999999999999999988888776665444433332222221111
Q ss_pred HHH--HHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccc
Q 000463 558 MWS--TPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVER 635 (1479)
Q Consensus 558 ~~~--~p~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~ 635 (1479)
... ....+..+.++.+....+.++.+.+++...+...+..|+..++..+..+.+++++++||.++++.++..+.....
T Consensus 248 ~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~ 327 (576)
T TIGR02204 248 VIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHP 327 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCC
Confidence 111 122334445677777788899999999999999999999999999999999999999999999865431111111
Q ss_pred c-cCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------
Q 000463 636 V-EGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------ 708 (1479)
Q Consensus 636 ~-~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------ 708 (1479)
. ...+....|+++|++|+|+++.++++|+|+||++++||+++|+|+||||||||+++|+|+++|.+|+|.++|
T Consensus 328 ~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~ 407 (576)
T TIGR02204 328 KTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQL 407 (576)
T ss_pred ccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhc
Confidence 0 111123469999999999754336799999999999999999999999999999999999999999999998
Q ss_pred -------eEEEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHH
Q 000463 709 -------TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 709 -------~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1479)
.++|+||+|+++++|++|||.+|.+ .++++..++++.+++.++++.+|.|.+|.+||+|.+||||||||++|
T Consensus 408 ~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~l 487 (576)
T TIGR02204 408 DPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAI 487 (576)
T ss_pred CHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHH
Confidence 4899999999999999999999875 45667778889999999999999999999999999999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCc
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGM 860 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~ 860 (1479)
|||++++|+++|||||||+||+++++.+++.+.+ ..+++|+|+|||+++.++.+|+|++|++|++++.|+++++.++++
T Consensus 488 aRal~~~~~ililDEpts~lD~~~~~~i~~~l~~-~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~~~ 566 (576)
T TIGR02204 488 ARAILKDAPILLLDEATSALDAESEQLVQQALET-LMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAKGG 566 (576)
T ss_pred HHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHH-HhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHcCC
Confidence 9999999999999999999999999988765544 457899999999999999999999999999999999999998888
Q ss_pred chHHHHH
Q 000463 861 DFGALVA 867 (1479)
Q Consensus 861 ~f~~l~~ 867 (1479)
.|.++..
T Consensus 567 ~~~~l~~ 573 (576)
T TIGR02204 567 LYARLAR 573 (576)
T ss_pred hHHHHHh
Confidence 8877653
No 55
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.1e-61 Score=620.57 Aligned_cols=540 Identities=20% Similarity=0.236 Sum_probs=418.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 321 TLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEG-YYLVLILLVAKFVEVFSTHQFNFNSQKLGML 399 (1479)
Q Consensus 321 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g-~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~r 399 (1479)
...+.+++.++...++.++..++..+.|+++..+++.+.......... ..+++++++..++..++.....+...+.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (592)
T PRK10790 16 AYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVG 95 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556777777888888999999999999999999764322211111 2223334444455555555556667788888
Q ss_pred HHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 000463 400 IRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHA-VWLMPLQISVALILLYNCLGA-SVITTVVG 477 (1479)
Q Consensus 400 iR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~~~-~w~~plqi~lal~lL~~~lG~-s~l~gl~~ 477 (1479)
+...+...+|+|.++++.....+.+.|+++|.++.|++++.+.+..... +....+.+++++.+++ .+++ .+++.+++
T Consensus 96 ~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~li~l~~ 174 (592)
T PRK10790 96 VVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMF-SLDWRMALVAIMI 174 (592)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 9999999999999999998888899999999999999999987654332 3322222333323232 2332 22222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Q 000463 478 IIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISG---- 553 (1479)
Q Consensus 478 ~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~---- 553 (1479)
+.+.+.+.....++.++..++..+..++-.+..+|.++|+++||.|+.|+.+.++..+..++..+...+.....+.
T Consensus 175 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (592)
T PRK10790 175 FPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRP 254 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333333444556667777777788888888999999999999999999999998887665544332221111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccc
Q 000463 554 NIIVMWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESV 633 (1479)
Q Consensus 554 ~~~~~~~~p~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~ 633 (1479)
...++.....++.++.+ .+ ...+.++.+.+++++.++..+..|+..++..+..+.++++|.+||.++++.++.+....
T Consensus 255 ~~~~~~~~~~~~~~~~~-~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~ 332 (592)
T PRK10790 255 LLSLFSALILCGLLMLF-GF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGND 332 (592)
T ss_pred HHHHHHHHHHHHHHHHH-HH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCC
Confidence 11111111111111222 23 35667999999999999999999999999999999999999999999998654322111
Q ss_pred ccccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe----
Q 000463 634 ERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT---- 709 (1479)
Q Consensus 634 ~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~---- 709 (1479)
.. ......|+++|++|+|++ ++++|+|+||++++||.++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 333 -~~--~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~ 407 (592)
T PRK10790 333 -DR--PLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSS 407 (592)
T ss_pred -cc--CCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhh
Confidence 11 112346999999999974 357999999999999999999999999999999999999999999999983
Q ss_pred ---------EEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHH
Q 000463 710 ---------TAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 710 ---------iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1479)
++||||+|.+|++|++|||.+|.+.++++..++++.+++.++++.+|.|.+|.+||+|.+||||||||++|
T Consensus 408 ~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRial 487 (592)
T PRK10790 408 LSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLAL 487 (592)
T ss_pred CCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHH
Confidence 89999999999999999999998888888899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCc
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGM 860 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~ 860 (1479)
|||++++|+|+|||||||+||+++++++.+.+. ...+++|+|+|||+++.++.+|+|++|++|++++.|+++|+++.++
T Consensus 488 ARaLl~~~~illlDEpts~LD~~t~~~i~~~l~-~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~~ 566 (592)
T PRK10790 488 ARVLVQTPQILILDEATANIDSGTEQAIQQALA-AVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQG 566 (592)
T ss_pred HHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHH-HHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 999999999999999999999999999976554 4456899999999999999999999999999999999999999889
Q ss_pred chHHHHHHh
Q 000463 861 DFGALVAAH 869 (1479)
Q Consensus 861 ~f~~l~~~~ 869 (1479)
.|.++.+..
T Consensus 567 ~y~~l~~~~ 575 (592)
T PRK10790 567 RYWQMYQLQ 575 (592)
T ss_pred HHHHHHHHH
Confidence 999887654
No 56
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.3e-64 Score=634.30 Aligned_cols=436 Identities=21% Similarity=0.355 Sum_probs=330.7
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc--CCcEEEECC--------------
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK--ISGKVKVCG-------------- 708 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~--~~G~i~~~g-------------- 708 (1479)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|
T Consensus 2 l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFG---GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeC---CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 78999999995 34699999999999999999999999999999999999986 799999987
Q ss_pred eEEEEeccCcCC-CCcHHHHHhcCCCCCh----hhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHH
Q 000463 709 TTAYVAQTSWIQ-NGTIEENILFGLPMNR----AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1479)
Q Consensus 709 ~iayv~Q~~~i~-~~Tv~enI~fg~~~~~----~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 783 (1479)
.++|++|++.++ +.|++||+.++..... ...++..+ ...+-++.+...+. .......+|||||||||+||||
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~-~~~~~~~~LSgG~~qrv~iA~a 155 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYL--RAKNLLRELQLDAD-NVTRPVGDYGGGQQQLVEIAKA 155 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHH--HHHHHHHHcCCCCC-cccCchhhCCHHHHHHHHHHHH
Confidence 289999998765 5699999998753210 01111111 12223444432211 0123467899999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhcCcch
Q 000463 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGMDF 862 (1479)
Q Consensus 784 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f 862 (1479)
++.+|+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++++.. ||+|++|++|+++..|+.+++.
T Consensus 156 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~------ 229 (500)
T TIGR02633 156 LNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS------ 229 (500)
T ss_pred HhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC------
Confidence 999999999999999999999999988666555568999999999999875 8999999999997644211000
Q ss_pred HHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHHHhcCcchHHHHHHHH
Q 000463 863 GALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYC 942 (1479)
Q Consensus 863 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~ 942 (1479)
. +. . .
T Consensus 230 -------------------------------------------------------------~-~~---------~----~ 234 (500)
T TIGR02633 230 -------------------------------------------------------------E-DD---------I----I 234 (500)
T ss_pred -------------------------------------------------------------H-HH---------H----H
Confidence 0 00 0 0
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 943 TEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIF 1022 (1479)
Q Consensus 943 ~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l 1022 (1479)
... .
T Consensus 235 ~~~------------------------------~---------------------------------------------- 238 (500)
T TIGR02633 235 TMM------------------------------V---------------------------------------------- 238 (500)
T ss_pred HHH------------------------------h----------------------------------------------
Confidence 000 0
Q ss_pred HHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000463 1023 FSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYW 1102 (1479)
Q Consensus 1023 ~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~ 1102 (1479)
|
T Consensus 239 ---------------------~---------------------------------------------------------- 239 (500)
T TIGR02633 239 ---------------------G---------------------------------------------------------- 239 (500)
T ss_pred ---------------------C----------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHH
Q 000463 1103 YRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGS 1182 (1479)
Q Consensus 1103 ~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~ 1182 (1479)
+ +
T Consensus 240 -------------------~-~---------------------------------------------------------- 241 (500)
T TIGR02633 240 -------------------R-E---------------------------------------------------------- 241 (500)
T ss_pred -------------------c-c----------------------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCC
Q 000463 1183 FTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNW 1262 (1479)
Q Consensus 1183 ~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~w 1262 (1479)
.. + ..+.+. . +
T Consensus 242 -----------------~~------------------------------------~-----~~~~~~------~-~---- 252 (500)
T TIGR02633 242 -----------------IT------------------------------------S-----LYPHEP------H-E---- 252 (500)
T ss_pred -----------------cc------------------------------------c-----cccccc------c-C----
Confidence 00 0 000000 0 0
Q ss_pred CCCccEEEEeeeeeecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-CccEEEEcCEecCCCCh-h
Q 000463 1263 PAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-SGGRIIIDGIDISLLGL-H 1339 (1479)
Q Consensus 1263 p~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-~~G~I~IDG~dI~~i~l-~ 1339 (1479)
+..--++++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+. .
T Consensus 253 ~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~ 332 (500)
T TIGR02633 253 IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQ 332 (500)
T ss_pred CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHH
Confidence 011248999999999532 23599999999999999999999999999999999999995 89999999999875443 5
Q ss_pred hhhcceEEEcCcc---cccc-ccHhhhcCCC-----CC---CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCC
Q 000463 1340 DLRSRFGIIPQEP---VLFE-GTVRSNIDPI-----GQ---YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGD 1403 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp---~LF~-gTIR~NLdp~-----~~---~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~ 1403 (1479)
.+|++++++||++ .+|. .|+++|+... .. .. .+++.+++++.++.+ .-.|.++ .
T Consensus 333 ~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~ 402 (500)
T TIGR02633 333 AIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKT------ASPFLPI----G 402 (500)
T ss_pred HHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccC------CCccCcc----c
Confidence 6788999999997 3665 4999999642 11 11 234667777776631 1123333 3
Q ss_pred CCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1404 NWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1404 nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
.||||||||++|||||+++|++|||||||++||+.+.+.+++.|++.. ++.|||+|||+++.+.+ ||||++|++|+
T Consensus 403 ~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~ 480 (500)
T TIGR02633 403 RLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGK 480 (500)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 599999999999999999999999999999999999999999998864 47899999999999987 99999999985
No 57
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.4e-64 Score=636.80 Aligned_cols=433 Identities=26% Similarity=0.436 Sum_probs=329.1
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCc--ccCCcEEEEC---------------
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEM--HKISGKVKVC--------------- 707 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~--~~~~G~i~~~--------------- 707 (1479)
|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFD---GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEEC---CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 46899999995 347999999999999999999999999999999999997 7999999885
Q ss_pred --------C-----------------------eEEEEecc-CcCC-CCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHh
Q 000463 708 --------G-----------------------TTAYVAQT-SWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEM 754 (1479)
Q Consensus 708 --------g-----------------------~iayv~Q~-~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~ 754 (1479)
| .++|++|+ +.++ ..|++||+.++........++.. ....+-++.
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~--~~~~~~l~~ 155 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAV--GRAVDLIEM 155 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHH--HHHHHHHHH
Confidence 1 27999997 4444 56999999875321100001110 111222333
Q ss_pred cccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccc
Q 000463 755 MEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH 833 (1479)
Q Consensus 755 l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~ 833 (1479)
+... ........+|||||||||+||||++.+|+++||||||++||+.+.+.+.+.+.+... .|+|||+||||++++.
T Consensus 156 ~gl~--~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~ 233 (520)
T TIGR03269 156 VQLS--HRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIE 233 (520)
T ss_pred cCCh--hhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHH
Confidence 3221 223467789999999999999999999999999999999999999999876665544 4899999999999986
Q ss_pred c-CCEEEEEeCCEEEEecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCccccc
Q 000463 834 N-VDLILVMREGMIVQSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQ 912 (1479)
Q Consensus 834 ~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1479)
. ||+|++|++|+++..|+++++...
T Consensus 234 ~~~d~i~~l~~G~i~~~g~~~~~~~~------------------------------------------------------ 259 (520)
T TIGR03269 234 DLSDKAIWLENGEIKEEGTPDEVVAV------------------------------------------------------ 259 (520)
T ss_pred HhcCEEEEEeCCEEeeecCHHHHHHH------------------------------------------------------
Confidence 5 899999999999876654332100
Q ss_pred ccccCCCchhhhHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHH
Q 000463 913 SNSDKGNSKLIKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGV 992 (1479)
Q Consensus 913 ~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v 992 (1479)
|.. .
T Consensus 260 ----------------------------~~~---~--------------------------------------------- 263 (520)
T TIGR03269 260 ----------------------------FME---G--------------------------------------------- 263 (520)
T ss_pred ----------------------------HHh---h---------------------------------------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHH
Q 000463 993 YGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMY 1072 (1479)
Q Consensus 993 y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~ 1072 (1479)
T Consensus 264 -------------------------------------------------------------------------------- 263 (520)
T TIGR03269 264 -------------------------------------------------------------------------------- 263 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHH
Q 000463 1073 ITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQEN 1152 (1479)
Q Consensus 1073 ~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~ 1152 (1479)
..+
T Consensus 264 -----------------------------------------~~~------------------------------------ 266 (520)
T TIGR03269 264 -----------------------------------------VSE------------------------------------ 266 (520)
T ss_pred -----------------------------------------chh------------------------------------
Confidence 000
Q ss_pred HHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1153 VNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENR 1232 (1479)
Q Consensus 1153 ~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~ 1232 (1479)
.+
T Consensus 267 ----------------------------------------------------------------------------~~-- 268 (520)
T TIGR03269 267 ----------------------------------------------------------------------------VE-- 268 (520)
T ss_pred ----------------------------------------------------------------------------hc--
Confidence 00
Q ss_pred hhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecC---CCCcceeeeeEEEeCCcEEEEECCCCCCHH
Q 000463 1233 MVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRS---NTPLVLKGITLSIHGGEKIGVVGRTGSGKS 1309 (1479)
Q Consensus 1233 ~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~---~~~~vL~~is~~I~~GekvgIVGrTGSGKS 1309 (1479)
. +.. .+. ...-++++|++++|.. +...+|+|+||+|++||++||+|+||||||
T Consensus 269 -----~-------~~~--------~~~----~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKS 324 (520)
T TIGR03269 269 -----K-------ECE--------VEV----GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKT 324 (520)
T ss_pred -----c-------ccc--------cCC----CCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHH
Confidence 0 000 000 1125999999999953 234699999999999999999999999999
Q ss_pred HHHHHHhccCCCCccEEEEc-CE---ecCCCC---hhhhhcceEEEcCccccccc-cHhhhcCC-CC-CC----CHHHHH
Q 000463 1310 TLIQVFFRLVEPSGGRIIID-GI---DISLLG---LHDLRSRFGIIPQEPVLFEG-TVRSNIDP-IG-QY----SDEEIW 1375 (1479)
Q Consensus 1310 TLl~~L~rl~~p~~G~I~ID-G~---dI~~i~---l~~LR~~i~iIpQdp~LF~g-TIR~NLdp-~~-~~----sd~eI~ 1375 (1479)
||+++|.|+.+|++|+|.++ |. ++...+ ...+|++++++||++.+|.. |+++|+.. .. .. .++++.
T Consensus 325 TLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 404 (520)
T TIGR03269 325 TLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAV 404 (520)
T ss_pred HHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99999999999999999996 64 344333 23467789999999988875 99999952 11 11 234567
Q ss_pred HHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--C
Q 000463 1376 KSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--A 1453 (1479)
Q Consensus 1376 ~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~ 1453 (1479)
++++.+++.+.- .++-++.++ ..||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ +
T Consensus 405 ~~l~~~~l~~~~--~~~~~~~~~----~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g 478 (520)
T TIGR03269 405 ITLKMVGFDEEK--AEEILDKYP----DELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEME 478 (520)
T ss_pred HHHHhCCCCCcc--chhhhhCCh----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC
Confidence 788888875310 000112222 36899999999999999999999999999999999999999999988643 7
Q ss_pred cEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1454 CTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1454 ~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
.|||+|+|+++.+.. ||||++|++|+
T Consensus 479 ~tvi~vsHd~~~~~~~~d~i~~l~~G~ 505 (520)
T TIGR03269 479 QTFIIVSHDMDFVLDVCDRAALMRDGK 505 (520)
T ss_pred cEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 899999999999987 99999999985
No 58
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.5e-64 Score=633.07 Aligned_cols=429 Identities=19% Similarity=0.337 Sum_probs=329.7
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------e
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------T 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~ 709 (1479)
.|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 4 ~i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFP---GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeC---CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 589999999995 35799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEeccCcCC-CCcHHHHHhcCCCCC----hhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 710 TAYVAQTSWIQ-NGTIEENILFGLPMN----RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~~~----~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
++|++|++-++ +.|++||+.++.... .....+..+ ...+-++.+..++ .......+|||||||||+|||||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~--~~~~~~~~LSgG~~qrv~la~al 156 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA--EADKLLARLNLRF--SSDKLVGELSIGEQQMVEIAKVL 156 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH--HHHHHHHHcCCCC--CccCchhhCCHHHHHHHHHHHHH
Confidence 79999997654 569999999874321 000111101 1222344443332 23466789999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhcCcchH
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGMDFG 863 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f~ 863 (1479)
+.+|+++||||||++||+.+++.+.+.+.+...+|+|+|++||+++++.. ||+|++|++|+++..|+.+++..
T Consensus 157 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~------ 230 (501)
T PRK10762 157 SFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE------ 230 (501)
T ss_pred hcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH------
Confidence 99999999999999999999999987665554568999999999999865 89999999999987654321100
Q ss_pred HHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHHHhcCcchHHHHHHHHH
Q 000463 864 ALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCT 943 (1479)
Q Consensus 864 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~ 943 (1479)
++ ...
T Consensus 231 --------------------------------------------------------------~~-------------~~~ 235 (501)
T PRK10762 231 --------------------------------------------------------------DS-------------LIE 235 (501)
T ss_pred --------------------------------------------------------------HH-------------HHH
Confidence 00 000
Q ss_pred HhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 944 EAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFF 1023 (1479)
Q Consensus 944 ~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~ 1023 (1479)
... . .
T Consensus 236 ~~~-----------------------------~---~------------------------------------------- 240 (501)
T PRK10762 236 MMV-----------------------------G---R------------------------------------------- 240 (501)
T ss_pred Hhc-----------------------------C---C-------------------------------------------
Confidence 000 0 0
Q ss_pred HHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000463 1024 SQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWY 1103 (1479)
Q Consensus 1024 ~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~ 1103 (1479)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHH
Q 000463 1104 RGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSF 1183 (1479)
Q Consensus 1104 ~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~ 1183 (1479)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCC
Q 000463 1184 TFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWP 1263 (1479)
Q Consensus 1184 ~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp 1263 (1479)
+.. ..++..+ .+ |
T Consensus 241 ------------------------------------------------------~~~---~~~~~~~-------~~---~ 253 (501)
T PRK10762 241 ------------------------------------------------------KLE---DQYPRLD-------KA---P 253 (501)
T ss_pred ------------------------------------------------------Ccc---ccccccc-------cC---C
Confidence 000 0000000 00 0
Q ss_pred CCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChh-hhh
Q 000463 1264 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH-DLR 1342 (1479)
Q Consensus 1264 ~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~-~LR 1342 (1479)
..-.++++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+.. .+|
T Consensus 254 ~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~ 326 (501)
T PRK10762 254 GEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLA 326 (501)
T ss_pred CCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHH
Confidence 112488999984 279999999999999999999999999999999999999999999999999876653 467
Q ss_pred cceEEEcCcc---cccc-ccHhhhcCCC-----CC----CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCC
Q 000463 1343 SRFGIIPQEP---VLFE-GTVRSNIDPI-----GQ----YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNW 1405 (1479)
Q Consensus 1343 ~~i~iIpQdp---~LF~-gTIR~NLdp~-----~~----~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1405 (1479)
++++|+||+| .+|. -|+++|+... .. .+ ++++.++++++++.+ ...+.++ ..|
T Consensus 327 ~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~L 396 (501)
T PRK10762 327 NGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKT------PSMEQAI----GLL 396 (501)
T ss_pred CCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCC------CCccCch----hhC
Confidence 8899999997 3554 5999999631 00 11 234667777776631 1123333 469
Q ss_pred CchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1406 SVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1406 SgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||||++|++|+
T Consensus 397 SgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~ 472 (501)
T PRK10762 397 SGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGR 472 (501)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999864 47899999999999977 99999999985
No 59
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.6e-64 Score=631.36 Aligned_cols=438 Identities=23% Similarity=0.396 Sum_probs=333.2
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 708 (1479)
..++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 10 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 86 (510)
T PRK15439 10 PLLCARSISKQYS---GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQL 86 (510)
T ss_pred ceEEEEeEEEEeC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhC
Confidence 3699999999995 24699999999999999999999999999999999999999999999987
Q ss_pred eEEEEeccCcCC-CCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 709 TTAYVAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 709 ~iayv~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
.++|++|++.++ +.|++||+.++.....+..++ ..+-++.+... .....+..+|||||||||+|||||+.+
T Consensus 87 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~------~~~~l~~~~l~--~~~~~~~~~LSgG~~qrv~la~aL~~~ 158 (510)
T PRK15439 87 GIYLVPQEPLLFPNLSVKENILFGLPKRQASMQK------MKQLLAALGCQ--LDLDSSAGSLEVADRQIVEILRGLMRD 158 (510)
T ss_pred CEEEEeccCccCCCCcHHHHhhcccccchHHHHH------HHHHHHHcCCC--ccccCChhhCCHHHHHHHHHHHHHHcC
Confidence 278999998765 469999999975322111111 12223333322 223567789999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhcCcchHHHH
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGMDFGALV 866 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~ 866 (1479)
|+++||||||++||+...+.+.+.+.+...+|+|+|++||+++++.. ||+|++|++|++++.|+++++... +..
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-----~~~ 233 (510)
T PRK15439 159 SRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTD-----DII 233 (510)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHH-----HHH
Confidence 99999999999999999999987766655568999999999999865 999999999999988877654321 000
Q ss_pred HHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHHHhcCcchHHHHHHHHHHhh
Q 000463 867 AAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCTEAY 946 (1479)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~ 946 (1479)
. ... .. . .
T Consensus 234 ~-------~~~---~~----------------------------~--~-------------------------------- 241 (510)
T PRK15439 234 Q-------AIT---PA----------------------------A--R-------------------------------- 241 (510)
T ss_pred H-------HHh---Cc----------------------------c--c--------------------------------
Confidence 0 000 00 0 0
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 947 GWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQI 1026 (1479)
Q Consensus 947 g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l 1026 (1479)
.. ..
T Consensus 242 ----------------------------~~---~~--------------------------------------------- 245 (510)
T PRK15439 242 ----------------------------EK---SL--------------------------------------------- 245 (510)
T ss_pred ----------------------------cc---cc---------------------------------------------
Confidence 00 00
Q ss_pred HHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000463 1027 LRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGY 1106 (1479)
Q Consensus 1027 l~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~ 1106 (1479)
T Consensus 246 -------------------------------------------------------------------------------- 245 (510)
T PRK15439 246 -------------------------------------------------------------------------------- 245 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHH
Q 000463 1107 YLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFC 1186 (1479)
Q Consensus 1107 y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~ 1186 (1479)
+..
T Consensus 246 -----~~~------------------------------------------------------------------------ 248 (510)
T PRK15439 246 -----SAS------------------------------------------------------------------------ 248 (510)
T ss_pred -----ccc------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCc
Q 000463 1187 LATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHG 1266 (1479)
Q Consensus 1187 ~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g 1266 (1479)
.+. .+ ..|...+ ..+ +..-
T Consensus 249 --------------------------------------------------~~~-~~-~~~~~~~------~~~---~~~~ 267 (510)
T PRK15439 249 --------------------------------------------------QKL-WL-ELPGNRR------QQA---AGAP 267 (510)
T ss_pred --------------------------------------------------ccc-cc-ccccccc------ccC---CCCc
Confidence 000 00 0000000 000 0112
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh-hhcce
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD-LRSRF 1345 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i 1345 (1479)
-++++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+... .|+++
T Consensus 268 ~l~~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 340 (510)
T PRK15439 268 VLTVEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGL 340 (510)
T ss_pred eEEEeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCc
Confidence 489999983 1699999999999999999999999999999999999999999999999998776654 46789
Q ss_pred EEEcCcc---ccccc-cHhhhcCCC-----CC--CC---HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1346 GIIPQEP---VLFEG-TVRSNIDPI-----GQ--YS---DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1346 ~iIpQdp---~LF~g-TIR~NLdp~-----~~--~s---d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
+|+||++ .+|.. |+++|+... .. .. ++++.++++..++.. ...+.++ ..|||||||
T Consensus 341 ~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LSgG~kq 410 (510)
T PRK15439 341 VYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKF------NHAEQAA----RTLSGGNQQ 410 (510)
T ss_pred EECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCC------CCccCcc----ccCCcHHHH
Confidence 9999996 36654 999998421 10 01 233556667666531 1233333 469999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.+ ||||++|++|+
T Consensus 411 rl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~ 480 (510)
T PRK15439 411 KVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGE 480 (510)
T ss_pred HHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999864 47899999999999987 99999999995
No 60
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=7.9e-62 Score=656.32 Aligned_cols=202 Identities=18% Similarity=0.280 Sum_probs=177.1
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
..|+++|++++|+.....+|+||||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++.+ +.++.|++|
T Consensus 1936 ~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~I 2014 (2272)
T TIGR01257 1936 DILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQNM 2014 (2272)
T ss_pred ceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhhE
Confidence 4699999999997543569999999999999999999999999999999999999999999999999965 466788999
Q ss_pred EEEcCccccccc-cHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1346 GIIPQEPVLFEG-TVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
|++||++.++.. |+||||..+ ...+ ++.+.++++.++|.++..+.+ ..||||||||+++||
T Consensus 2015 Gy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~~-----------~~LSGGqKqRLslA~ 2083 (2272)
T TIGR01257 2015 GYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLA-----------GTYSGGNKRKLSTAI 2083 (2272)
T ss_pred EEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999998865 999999632 1122 234567788899887655443 358999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||+.+|+||+|||||++||+.+.+.+++.|++.. +++|||++||+++.+.. ||||++|++|+
T Consensus 2084 ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~ 2147 (2272)
T TIGR01257 2084 ALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGA 2147 (2272)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999863 57999999999999987 99999999995
No 61
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.8e-61 Score=610.91 Aligned_cols=528 Identities=20% Similarity=0.236 Sum_probs=412.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 000463 338 IVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITSLYRKGLRLSC 417 (1479)
Q Consensus 338 l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR~~L~~~Iy~K~L~ls~ 417 (1479)
++..++..+.|++++.++|.+.+........+.+++.++++.++..++.....+...+.+.++...+...+|+|.++++.
T Consensus 5 ~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~ 84 (569)
T PRK10789 5 IIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHP 84 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 44556667789999999997754321122233344445555555556555555566678889999999999999999999
Q ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 418 SARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGAS-VITTVVGIIGVMIFVVMGTKRNNRF 495 (1479)
Q Consensus 418 ~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s-~l~gl~~~il~~~~~~~~~~~~~~~ 495 (1479)
....++.+|+++|.++.|++++..... .+..++..++..++++++++..++|. +++.++++++.+.+...+.++.++.
T Consensus 85 ~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~ 164 (569)
T PRK10789 85 EFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHER 164 (569)
T ss_pred HHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999999999986653 45555655555555554443345542 3333333444444455566777777
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Q 000463 496 QFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWSTP--VLISTLTFATA 573 (1479)
Q Consensus 496 q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~p--~~v~~~tF~~~ 573 (1479)
.++..+..++..+...|.++|+++||.|++|+.+.++..+.-++..+...+.....+....+..... ..+.++.++.+
T Consensus 165 ~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 244 (569)
T PRK10789 165 FKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSW 244 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777778889999999999999999999997777765443322222222222222111111111 12233456667
Q ss_pred HHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccccCCCCCccEEEEeeEEE
Q 000463 574 LLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEVRDGVFS 653 (1479)
Q Consensus 574 ~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~f~ 653 (1479)
...++.+|.+.+++++.++..+..|+..++..+..+.+++++.+||.++++.++..+.... +....+..|+++|++|+
T Consensus 245 lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~--~~~~~~~~I~~~~v~~~ 322 (569)
T PRK10789 245 MVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSE--PVPEGRGELDVNIRQFT 322 (569)
T ss_pred HHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCC--CCCCCCCcEEEEEEEEE
Confidence 6778889999999999999999999999999999999999999999999986543221111 11112346999999999
Q ss_pred ecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------EEEEeccCcCC
Q 000463 654 WDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------TAYVAQTSWIQ 720 (1479)
Q Consensus 654 ~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------iayv~Q~~~i~ 720 (1479)
|+.+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|++|+|+++
T Consensus 323 y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf 401 (569)
T PRK10789 323 YPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLF 401 (569)
T ss_pred CCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeec
Confidence 9743 357999999999999999999999999999999999999999999999873 79999999999
Q ss_pred CCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCC
Q 000463 721 NGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSA 799 (1479)
Q Consensus 721 ~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~sa 799 (1479)
++|++|||.+|.+ .+++..+++++.+++.+++..+|.|.+|.+|++|.+||||||||++||||++++|+++|||||||+
T Consensus 402 ~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~ 481 (569)
T PRK10789 402 SDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSA 481 (569)
T ss_pred cccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcccc
Confidence 9999999999964 566777888888999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHHHh
Q 000463 800 VDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVAAH 869 (1479)
Q Consensus 800 LD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~~ 869 (1479)
||+++++++.+.+.+ ..+|+|+|+|||+++.++.+|+|++|++|++++.|++++++++++.|.++...+
T Consensus 482 LD~~~~~~i~~~l~~-~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 550 (569)
T PRK10789 482 VDGRTEHQILHNLRQ-WGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQ 550 (569)
T ss_pred CCHHHHHHHHHHHHH-HhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHh
Confidence 999999999876544 457999999999999999999999999999999999999998888888877543
No 62
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.4e-61 Score=608.97 Aligned_cols=539 Identities=20% Similarity=0.254 Sum_probs=411.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 322 LLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTS-GKSS--SFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGM 398 (1479)
Q Consensus 322 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~--~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~ 398 (1479)
..+.+++.++++.++.++..++..+.|.++..+++-.- .+.. ........++++++..++..++.....+...+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATF 89 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777888888999999999999999999998542 2210 01111112223333444555555555566778889
Q ss_pred HHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Q 000463 399 LIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQ-LHAVWLMPLQISVALILLY---NCLGASVITT 474 (1479)
Q Consensus 399 riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~-~~~~w~~plqi~lal~lL~---~~lG~s~l~g 474 (1479)
++...+...+|+|.++++....++..+|++++.++.|++++.+++.. +..+....+.+++++++++ ..+++.++++
T Consensus 90 ~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~ 169 (574)
T PRK11160 90 RVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGI 169 (574)
T ss_pred HHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888899999999999999999997743 3344444444444444333 2233322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 475 VVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGN 554 (1479)
Q Consensus 475 l~~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~ 554 (1479)
+.+++ ..+..++.++.++..++..+..++....+.|.++|+++||.|+.|+.+.++..+..++-.+...+.....+..
T Consensus 170 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (574)
T PRK11160 170 LLLLL--LLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLS 247 (574)
T ss_pred HHHHH--HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111 1223445667777788888888888899999999999999999999988888776554444333333333322
Q ss_pred HHHHHHHH-H-HHHHHHHHHHHHhcCccCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccc
Q 000463 555 IIVMWSTP-V-LISTLTFATALLFGVPLDAGSVFTTTTIFKI-LQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNE 631 (1479)
Q Consensus 555 ~~~~~~~p-~-~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~i-L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~ 631 (1479)
..+..... . .+.++.++.+. ..+.++.+..++++.+..+ ...|+..++..+..+.++++|.+||.++++.++..++
T Consensus 248 ~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~ 326 (574)
T PRK11160 248 QALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTF 326 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 22221111 1 12233445554 4667888887776655433 3468888999999999999999999999986543211
Q ss_pred ccccccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--
Q 000463 632 SVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-- 709 (1479)
Q Consensus 632 ~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-- 709 (1479)
.... +.......|+++|++|+|+++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 327 ~~~~-~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i 404 (574)
T PRK11160 327 PTTS-TAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPI 404 (574)
T ss_pred Cccc-CCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEh
Confidence 1010 111123579999999999643 347999999999999999999999999999999999999999999999983
Q ss_pred -----------EEEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHH
Q 000463 710 -----------TAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQR 777 (1479)
Q Consensus 710 -----------iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 777 (1479)
++||||+|+++++|++|||.+|.+ .+++...++++.+++.++++. |+|.+|.+||+|.+||||||||
T Consensus 405 ~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqR 483 (574)
T PRK11160 405 ADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRR 483 (574)
T ss_pred hhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHH
Confidence 799999999999999999999875 466777888999999999999 9999999999999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHh
Q 000463 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 778 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
++||||++++|+++|||||||+||+++++++.+.+. ...+++|+|+|||+++.++.||+|++|++|++++.|+++|+++
T Consensus 484 ialARall~~~~ililDE~ts~lD~~t~~~i~~~l~-~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 484 LGIARALLHDAPLLLLDEPTEGLDAETERQILELLA-EHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLA 562 (574)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHH-HHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 999999999999999999999999999999987554 4457899999999999999999999999999999999999999
Q ss_pred cCcchHHHHH
Q 000463 858 SGMDFGALVA 867 (1479)
Q Consensus 858 ~~~~f~~l~~ 867 (1479)
+++.|.++.+
T Consensus 563 ~~g~y~~l~~ 572 (574)
T PRK11160 563 QQGRYYQLKQ 572 (574)
T ss_pred cCcHHHHHHh
Confidence 9888887754
No 63
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=8.6e-61 Score=621.71 Aligned_cols=544 Identities=22% Similarity=0.234 Sum_probs=432.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 319 RTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGM 398 (1479)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~ 398 (1479)
+...++.+++.+....+..++..++.++.|++++.++|.+-.... ...-+.++++++++.++..++.....+...+++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~-~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 208 (694)
T TIGR01846 130 FIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG-LSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTS 208 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455667778888888889999999999999999997643221 1122334445555556666666666777778999
Q ss_pred HHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 399 LIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVG 477 (1479)
Q Consensus 399 riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~ 477 (1479)
++...+...+|+|.++++.....+.++|+++|.+ .|++.+.+++. .+..+....+.+++.+.+++..-++-+++.+++
T Consensus 209 ~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~ 287 (694)
T TIGR01846 209 RIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGS 287 (694)
T ss_pred HHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988889999999999 59999998753 333333233333333434433333333344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 478 IIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIV 557 (1479)
Q Consensus 478 ~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~ 557 (1479)
+++...+..++.+..++..++.++..+++...+.|.++|+++||.++.|+.+.++..+.-++..+...+.....+.....
T Consensus 288 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (694)
T TIGR01846 288 LVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQA 367 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555667777788888888999999999999999999999999999988888776655554444433333332222
Q ss_pred HHHHHH--HHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccc
Q 000463 558 MWSTPV--LISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVER 635 (1479)
Q Consensus 558 ~~~~p~--~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~ 635 (1479)
...... .+.++.++.+....+.+|.+.+.++..+...+..|+..+...+..+.+++++++|+.++++.++..+.. ..
T Consensus 368 ~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~-~~ 446 (694)
T TIGR01846 368 IELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA-GL 446 (694)
T ss_pred HHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC-CC
Confidence 222221 223456777777788999999999999999999999999999999999999999999999876433211 11
Q ss_pred ccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------
Q 000463 636 VEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------ 709 (1479)
Q Consensus 636 ~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------ 709 (1479)
.+....+..|+++|++|+|+++ ++++|+|+||++++||.++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 447 ~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~ 525 (694)
T TIGR01846 447 AALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIAD 525 (694)
T ss_pred CCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCC
Confidence 1111223579999999999743 357999999999999999999999999999999999999999999999983
Q ss_pred -------EEEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHH
Q 000463 710 -------TAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1479)
Q Consensus 710 -------iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1479)
++||||+|.++++|++|||.++.+ .+++...++++.+++.+.++.+|.|.+|.+|++|.+||||||||++||
T Consensus 526 ~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lA 605 (694)
T TIGR01846 526 PAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIA 605 (694)
T ss_pred HHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999865 456667778888899999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcc
Q 000463 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMD 861 (1479)
Q Consensus 782 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~ 861 (1479)
||++++|+++|||||||+||+++++++.+.+.+ ..+++|+|++||+++.++.||+|++|++|++++.|+++++++.++.
T Consensus 606 Rall~~~~ililDEpts~LD~~~~~~i~~~l~~-~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~~~~ 684 (694)
T TIGR01846 606 RALVGNPRILIFDEATSALDYESEALIMRNMRE-ICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLALQGL 684 (694)
T ss_pred HHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHH-HhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHcCCh
Confidence 999999999999999999999999999876544 4578999999999999999999999999999999999999998888
Q ss_pred hHHHHH
Q 000463 862 FGALVA 867 (1479)
Q Consensus 862 f~~l~~ 867 (1479)
|.++..
T Consensus 685 y~~l~~ 690 (694)
T TIGR01846 685 YARLWQ 690 (694)
T ss_pred HHHHHH
Confidence 988765
No 64
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.1e-60 Score=610.28 Aligned_cols=538 Identities=22% Similarity=0.282 Sum_probs=415.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 322 LLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIR 401 (1479)
Q Consensus 322 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR 401 (1479)
.++.+++.+.+..++.++..++..+.|+++..++|.+..+. ..+ .++..+.+..++..+......+...++..++|
T Consensus 13 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK13657 13 YLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKG-DIF---PLLAAWAGFGLFNIIAGVLVARHADRLAHRRR 88 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556777778888888999999999999999999775432 111 11111111222222222233445667888889
Q ss_pred HHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 000463 402 CTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGA-SVITTVVGII 479 (1479)
Q Consensus 402 ~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~-s~l~gl~~~i 479 (1479)
..+...+|+|.++++.....+.+.|++++.++.|++.+.+... .+.......+..++.+++++. +++ .+++.+++++
T Consensus 89 ~~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~l~~~~ 167 (588)
T PRK13657 89 LAVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALF-MNWRLSLVLVVLGI 167 (588)
T ss_pred HHHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 9999999999999999888889999999999999999876533 222222222222222222222 222 2233333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Q 000463 480 GVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRES----EFGWLTKFMYSISGNI 555 (1479)
Q Consensus 480 l~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~----El~~l~k~~~~~a~~~ 555 (1479)
+...+...+.++.++.+++.++..++......|.++|+++||.|+.|+.+.++..+.-++ +.+..+..........
T Consensus 168 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (588)
T PRK13657 168 VYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNR 247 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444456677788888899999999999999999999999999999999876666544433 3333222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccc
Q 000463 556 IVMWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVER 635 (1479)
Q Consensus 556 ~~~~~~p~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~ 635 (1479)
+ ...-..+.++.++.+....+.+|.+.+++++.++..+..|+..+...+..+.+++.+++|+.++++.++..+.....
T Consensus 248 ~--~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~ 325 (588)
T PRK13657 248 A--ASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGA 325 (588)
T ss_pred H--HHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCC
Confidence 1 11122334556777777888999999999999999999999999999999999999999999999764432111111
Q ss_pred ccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------
Q 000463 636 VEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------- 708 (1479)
Q Consensus 636 ~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------- 708 (1479)
.+....+..|+++|++|+|++ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 326 ~~~~~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~ 403 (588)
T PRK13657 326 IDLGRVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVT 403 (588)
T ss_pred CCcCCCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCC
Confidence 111112346999999999963 24699999999999999999999999999999999999999999999998
Q ss_pred ------eEEEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHH
Q 000463 709 ------TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1479)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1479)
.++||||+|+++++|+||||.++.+ .+++...++++.+++.+.+..+|.|.+|.+|++|.+||||||||++||
T Consensus 404 ~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialA 483 (588)
T PRK13657 404 RASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIA 483 (588)
T ss_pred HHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHH
Confidence 4899999999999999999999964 456667788899999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcc
Q 000463 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMD 861 (1479)
Q Consensus 782 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~ 861 (1479)
||++++|+|+|||||||+||+++++.+++.+.+ ..+++|+|+|||+++.++.||+|++|++|++++.|+++++++.++.
T Consensus 484 Rall~~~~iliLDEpts~LD~~t~~~i~~~l~~-~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~~~~ 562 (588)
T PRK13657 484 RALLKDPPILILDEATSALDVETEAKVKAALDE-LMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVARGGR 562 (588)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHH-HhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHCCCh
Confidence 999999999999999999999999999876644 4568999999999999999999999999999999999999988888
Q ss_pred hHHHHHHh
Q 000463 862 FGALVAAH 869 (1479)
Q Consensus 862 f~~l~~~~ 869 (1479)
|.++....
T Consensus 563 y~~l~~~~ 570 (588)
T PRK13657 563 FAALLRAQ 570 (588)
T ss_pred HHHHHHHh
Confidence 88877643
No 65
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=4.1e-61 Score=607.62 Aligned_cols=504 Identities=17% Similarity=0.209 Sum_probs=385.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 322 LLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIR 401 (1479)
Q Consensus 322 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR 401 (1479)
..+.+++.++...++.++..++..+.|++++.+++.+...+. ...-+.+..++++..++..++.....+...+.+.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (529)
T TIGR02868 7 LLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP-VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSL 85 (529)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445677777788888899999999999999999986643321 1110111111222333444444444455567888888
Q ss_pred HHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 402 CTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQL-HAVWLMPLQISVALILLYNCLGASVITTVVGIIG 480 (1479)
Q Consensus 402 ~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~-~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~il 480 (1479)
..+...+|+|.++++....++.++|+++|.++.|++++.+.+... ..+....+.+++++++++..-...+++.++.+++
T Consensus 86 ~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~ 165 (529)
T TIGR02868 86 GRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLL 165 (529)
T ss_pred HHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 899999999999999988888999999999999999999876543 3334444444444444332222222222222222
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 481 VMIFV-VMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMW 559 (1479)
Q Consensus 481 ~~~~~-~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~ 559 (1479)
+..+. .+..+..++..++..+..++..+...|.++|+++||.|++|+.+.++..+..++..+...+.....+....+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (529)
T TIGR02868 166 AGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQL 245 (529)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222 22334445566677788899999999999999999999999999999888776655555444444443332222
Q ss_pred HHHHH--HHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccccc
Q 000463 560 STPVL--ISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVE 637 (1479)
Q Consensus 560 ~~p~~--v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~ 637 (1479)
....+ +.++.++.+...++.++.+.+.+.+.+...+..|+..++..+..+.++++|.+|+.++++.++..++.....+
T Consensus 246 ~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~ 325 (529)
T TIGR02868 246 LAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVPAA 325 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCC
Confidence 22222 2233556666677889999999999999999999999999999999999999999999986543221110000
Q ss_pred --CCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------
Q 000463 638 --GCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------- 708 (1479)
Q Consensus 638 --~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------- 708 (1479)
.......|+++|++|+|+++ +++|+|+||++++||+++|+||+|||||||+++|+|+++|++|+|.++|
T Consensus 326 ~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~~ 403 (529)
T TIGR02868 326 GALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSLQ 403 (529)
T ss_pred cccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhHH
Confidence 11123469999999999643 4699999999999999999999999999999999999999999999999
Q ss_pred -----eEEEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHH
Q 000463 709 -----TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLAR 782 (1479)
Q Consensus 709 -----~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 782 (1479)
.++||||+|++|++||+|||.+|.+ .++++.+++++.++++++++.+|+|.+|.+||+|.+||||||||++|||
T Consensus 404 ~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiAR 483 (529)
T TIGR02868 404 DELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALAR 483 (529)
T ss_pred HHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHH
Confidence 6899999999999999999999875 5778889999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCC
Q 000463 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQV 829 (1479)
Q Consensus 783 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~ 829 (1479)
|++++|+|+|||||||+||+++++.|.+.+. ...+++|+|+|||++
T Consensus 484 all~~~~iliLDE~TSaLD~~te~~I~~~l~-~~~~~~TvIiItHrl 529 (529)
T TIGR02868 484 ALLADAPILLLDEPTEHLDAGTESELLEDLL-AALSGKTVVVITHHL 529 (529)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHH-HhcCCCEEEEEecCC
Confidence 9999999999999999999999999987654 456789999999985
No 66
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-64 Score=627.15 Aligned_cols=431 Identities=21% Similarity=0.345 Sum_probs=327.7
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------e
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------T 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~ 709 (1479)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 5899999999952 4699999999999999999999999999999999999999999999876 2
Q ss_pred EEEEeccCcCCC-CcHHHHHhcCCCCC--h-hhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHh
Q 000463 710 TAYVAQTSWIQN-GTIEENILFGLPMN--R-AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1479)
Q Consensus 710 iayv~Q~~~i~~-~Tv~enI~fg~~~~--~-~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 785 (1479)
++|++|++.++. .|++||+.++.... . ...++.. ....+.++.+...+ ....+..+|||||||||+||||++
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~l~~--~~~~~~~~LSgGq~qrv~laral~ 156 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLN--YEAREQLEHLGVDI--DPDTPLKYLSIGQRQMVEIAKALA 156 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHH--HHHHHHHHHcCCCC--CcCCchhhCCHHHHHHHHHHHHHH
Confidence 799999987664 69999999864210 0 0011111 11223344443322 235677899999999999999999
Q ss_pred cCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhcCcchHH
Q 000463 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGMDFGA 864 (1479)
Q Consensus 786 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~ 864 (1479)
.+|+++||||||++||+.+.+.+++.+.+...+|+|+|++||+++++.. ||+|++|++|+++..++..+
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~---------- 226 (501)
T PRK11288 157 RNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMA---------- 226 (501)
T ss_pred hCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccc----------
Confidence 9999999999999999999999987666655568999999999999865 89999999999875321000
Q ss_pred HHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHHHhcCcchHHHHHHHHHH
Q 000463 865 LVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCTE 944 (1479)
Q Consensus 865 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~ 944 (1479)
. . . .++ +...
T Consensus 227 ----------------~---------------------~----------~----------~~~-------------~~~~ 236 (501)
T PRK11288 227 ----------------Q---------------------V----------D----------RDQ-------------LVQA 236 (501)
T ss_pred ----------------c---------------------C----------C----------HHH-------------HHHH
Confidence 0 0 0 000 0000
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 945 AYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFS 1024 (1479)
Q Consensus 945 ~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~ 1024 (1479)
. .. .
T Consensus 237 ~------------------------------~~--~-------------------------------------------- 240 (501)
T PRK11288 237 M------------------------------VG--R-------------------------------------------- 240 (501)
T ss_pred h------------------------------cC--C--------------------------------------------
Confidence 0 00 0
Q ss_pred HHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000463 1025 QILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYR 1104 (1479)
Q Consensus 1025 ~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~ 1104 (1479)
+
T Consensus 241 ---------~---------------------------------------------------------------------- 241 (501)
T PRK11288 241 ---------E---------------------------------------------------------------------- 241 (501)
T ss_pred ---------C----------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHH
Q 000463 1105 GYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFT 1184 (1479)
Q Consensus 1105 ~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~ 1184 (1479)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCC
Q 000463 1185 FCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPA 1264 (1479)
Q Consensus 1185 ~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~ 1264 (1479)
. ++. .+.++ . + +.
T Consensus 242 ---------------~------------------------------------~~~-----~~~~~------~--~---~~ 254 (501)
T PRK11288 242 ---------------I------------------------------------GDI-----YGYRP------R--P---LG 254 (501)
T ss_pred ---------------c------------------------------------ccc-----ccccc------c--C---CC
Confidence 0 000 00000 0 0 01
Q ss_pred CccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCCh-hhhhc
Q 000463 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL-HDLRS 1343 (1479)
Q Consensus 1265 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l-~~LR~ 1343 (1479)
...++++|++++ .+++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +..|+
T Consensus 255 ~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 328 (501)
T PRK11288 255 EVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRA 328 (501)
T ss_pred CcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHhC
Confidence 125888999842 38999999999999999999999999999999999999999999999999875433 45678
Q ss_pred ceEEEcCccc---ccc-ccHhhhcCCCC--C-------CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCC
Q 000463 1344 RFGIIPQEPV---LFE-GTVRSNIDPIG--Q-------YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWS 1406 (1479)
Q Consensus 1344 ~i~iIpQdp~---LF~-gTIR~NLdp~~--~-------~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1406 (1479)
+++++||+|. +|. .|+.+|+.... . .. ++++.++++..++.+ +..++++ .+||
T Consensus 329 ~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LS 398 (501)
T PRK11288 329 GIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKT------PSREQLI----MNLS 398 (501)
T ss_pred CCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCccc------CCccCcc----ccCC
Confidence 9999999983 554 69999986311 0 01 234666777776621 1233333 3699
Q ss_pred chHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1407 gGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||||++|||||+.+|+||||||||++||..+.+.+.+.|++.. .+.|||+|||+++.+.. ||||++|++|+
T Consensus 399 gGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~ 473 (501)
T PRK11288 399 GGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGR 473 (501)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999998864 47899999999999976 99999999985
No 67
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-63 Score=624.00 Aligned_cols=469 Identities=18% Similarity=0.286 Sum_probs=328.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--eEEEEeccCcCC-C
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--TTAYVAQTSWIQ-N 721 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~iayv~Q~~~i~-~ 721 (1479)
|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|++|++.++ +
T Consensus 2 l~i~~ls~~~~---~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~~~i~~~~q~~~~~~~ 78 (530)
T PRK15064 2 LSTANITMQFG---AKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPNERLGKLRQDQFAFEE 78 (530)
T ss_pred EEEEEEEEEeC---CcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCcCCC
Confidence 78999999995 34799999999999999999999999999999999999999999999986 699999997654 5
Q ss_pred CcHHHHHhcCCCCCh--------------------hhHHHHH----------HHhchHHHHHhcccCCccccccCCCccc
Q 000463 722 GTIEENILFGLPMNR--------------------AKYGEVV----------RVCCLEKDLEMMEYGDQTEIGERGINLS 771 (1479)
Q Consensus 722 ~Tv~enI~fg~~~~~--------------------~~~~~v~----------~~~~l~~dl~~l~~gd~t~ig~~g~~LS 771 (1479)
.|++||+.++..... ..+.+.. ......+-++.+...+. .......+||
T Consensus 79 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~~LS 157 (530)
T PRK15064 79 FTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEE-QHYGLMSEVA 157 (530)
T ss_pred CcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChh-HhcCchhhcC
Confidence 699999987631000 0000000 00011222333322111 1124578999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEE-EEe
Q 000463 772 GGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMI-VQS 849 (1479)
Q Consensus 772 GGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i-~~~ 849 (1479)
|||||||+||||++.+|+++||||||++||+...+.+.+.+. ..|+|||+|||+++++.. ||+|++|++|++ ++.
T Consensus 158 gGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~---~~~~tiiivsHd~~~~~~~~d~i~~l~~g~i~~~~ 234 (530)
T PRK15064 158 PGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLN---ERNSTMIIISHDRHFLNSVCTHMADLDYGELRVYP 234 (530)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHH---hCCCeEEEEeCCHHHHHhhcceEEEEeCCEEEEec
Confidence 999999999999999999999999999999999998876543 248999999999999875 899999999999 478
Q ss_pred cChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHHHh
Q 000463 850 GRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERE 929 (1479)
Q Consensus 850 g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~ 929 (1479)
|+++++++.... ........ .. + .+++.+.
T Consensus 235 g~~~~~~~~~~~-------~~~~~~~~-----------------------~~-------------------~-~~~~~~~ 264 (530)
T PRK15064 235 GNYDEYMTAATQ-------ARERLLAD-----------------------NA-------------------K-KKAQIAE 264 (530)
T ss_pred CCHHHHHHHHHH-------HHHHHHHH-----------------------HH-------------------H-HHHHHHH
Confidence 988876531000 00000000 00 0 0000000
Q ss_pred cCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 000463 930 TGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAY 1009 (1479)
Q Consensus 930 ~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~ 1009 (1479)
...+..
T Consensus 265 --------~~~~~~------------------------------------------------------------------ 270 (530)
T PRK15064 265 --------LQSFVS------------------------------------------------------------------ 270 (530)
T ss_pred --------HHHHHH------------------------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000463 1010 FVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPT 1089 (1479)
Q Consensus 1010 ~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 1089 (1479)
T Consensus 271 -------------------------------------------------------------------------------- 270 (530)
T PRK15064 271 -------------------------------------------------------------------------------- 270 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhH
Q 000463 1090 IFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGS 1169 (1479)
Q Consensus 1090 ~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~ 1169 (1479)
+... ++. ++ ...+
T Consensus 271 --------------------------~~~~--~~~---------------~~----------------~~~~-------- 283 (530)
T PRK15064 271 --------------------------RFSA--NAS---------------KA----------------KQAT-------- 283 (530)
T ss_pred --------------------------Hhhc--cch---------------hh----------------HHHH--------
Confidence 0000 000 00 0000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccch
Q 000463 1170 NEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEA 1249 (1479)
Q Consensus 1170 ~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~ 1249 (1479)
......++... ...+...
T Consensus 284 -------------------------------------------------------------~~~~~~~~~~~-~~~~~~~ 301 (530)
T PRK15064 284 -------------------------------------------------------------SRAKQIDKIKL-EEVKPSS 301 (530)
T ss_pred -------------------------------------------------------------HHHHHHhhccc-cccCCcc
Confidence 00000000000 0000000
Q ss_pred hccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEc
Q 000463 1250 AWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIID 1329 (1479)
Q Consensus 1250 ~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~ID 1329 (1479)
........+...-+.+..++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++
T Consensus 302 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~ 379 (530)
T PRK15064 302 RQNPFIRFEQDKKLHRNALEVENLTKGFDN--GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWS 379 (530)
T ss_pred ccCceeeCCCCCCCCCceEEEEeeEEeeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEC
Confidence 000000000000011236999999999964 359999999999999999999999999999999999999999999999
Q ss_pred CEecCCCChhhhhcceEEEcCccc--ccc-ccHhhhcCCCC--CCCHHHHHHHHHHcCch-HHHHhCcCCccccccCCCC
Q 000463 1330 GIDISLLGLHDLRSRFGIIPQEPV--LFE-GTVRSNIDPIG--QYSDEEIWKSLERCQLK-DVVAAKPDKLDSLVADSGD 1403 (1479)
Q Consensus 1330 G~dI~~i~l~~LR~~i~iIpQdp~--LF~-gTIR~NLdp~~--~~sd~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~ 1403 (1479)
| +++++|+||++. ++. .|+++|+..+. ...++++.++|+..++. +..... ..
T Consensus 380 ~-----------~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~ 437 (530)
T PRK15064 380 E-----------NANIGYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDIKKS-----------VK 437 (530)
T ss_pred C-----------ceEEEEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHhcCc-----------cc
Confidence 7 357999999984 443 59999985332 23456788899999884 333222 24
Q ss_pred CCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1404 NWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1404 nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+||||||||++||||++++|+||||||||++||+.+...+.+.|++. ++|||+|||+++.+.. ||||++|++|+
T Consensus 438 ~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~ 512 (530)
T PRK15064 438 VLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDG 512 (530)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 68999999999999999999999999999999999999999999875 5699999999999987 99999999985
No 68
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=8e-61 Score=605.79 Aligned_cols=520 Identities=19% Similarity=0.199 Sum_probs=411.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 325 CFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTL 404 (1479)
Q Consensus 325 ~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR~~L 404 (1479)
.+++.++...++.++..++..+.|++++.++|.+-.... ...-+.+++.+++..++..++.....+...+++.++...+
T Consensus 3 ~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 81 (544)
T TIGR01842 3 KNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS-VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGAL 81 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777788888889999999999999999996542221 1223344555666666777777777778889999999999
Q ss_pred HHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Q 000463 405 ITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQ--LHAVWLMPLQISVALI--LLYNCLGASVITTVVGIIG 480 (1479)
Q Consensus 405 ~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~--~~~~w~~plqi~lal~--lL~~~lG~s~l~gl~~~il 480 (1479)
...+|+|.++++.. ..+...+.++.|++++.+.+.. +..+...++.++..++ .+...+++.+++++ ++
T Consensus 82 r~~~~~~ll~~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~---~l 153 (544)
T TIGR01842 82 NQPIFAASFSATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLLVCFLLHPWIGILALGGA---VV 153 (544)
T ss_pred HHHHHHHHhcCccc-----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH---HH
Confidence 99999999999863 2255678889999999987543 3333333433333222 22223333333222 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 481 VMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWS 560 (1479)
Q Consensus 481 ~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~ 560 (1479)
.+.+..+..++.++..++.++..+++.+.++|.++|+++||.|++|+.+.++..+..++..+...+.....+....+...
T Consensus 154 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (544)
T TIGR01842 154 LVGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKY 233 (544)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23344455677778888899999999999999999999999999999999998877776555554444333333222222
Q ss_pred HH--HHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccccC
Q 000463 561 TP--VLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEG 638 (1479)
Q Consensus 561 ~p--~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~ 638 (1479)
.. ..+.++.++.+....+.+|++.+++++.++..+..|+..++..+..+.+++++.+||.++++.++..++.. +.
T Consensus 234 ~~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~---~~ 310 (544)
T TIGR01842 234 FRIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAM---PL 310 (544)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC---CC
Confidence 22 12334567777777889999999999999999999999999999999999999999999997654332111 11
Q ss_pred CCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----------
Q 000463 639 CDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------- 708 (1479)
Q Consensus 639 ~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------- 708 (1479)
...+..++++|++|+|++. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 311 ~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~ 389 (544)
T TIGR01842 311 PEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRET 389 (544)
T ss_pred CCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHH
Confidence 1123469999999999643 35799999999999999999999999999999999999999999999988
Q ss_pred ---eEEEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 709 ---TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 709 ---~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
.++||||+|+++++|++|||.++.+ .+++...++++.+++++.++.+|.|.+|.+|++|.+||||||||++||||+
T Consensus 390 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARal 469 (544)
T TIGR01842 390 FGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARAL 469 (544)
T ss_pred HhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHH
Confidence 3899999999999999999986654 667777788888999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHh
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+++|+++|||||||+||+++++++.+.+.+...+|+|+|++||+++.+..||+|++|++|++++.|+++++.+
T Consensus 470 l~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 470 YGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred hcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999999998765544346899999999999888899999999999999999988764
No 69
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-63 Score=623.38 Aligned_cols=428 Identities=21% Similarity=0.378 Sum_probs=324.6
Q ss_pred EeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------EEEE
Q 000463 648 RDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------TAYV 713 (1479)
Q Consensus 648 ~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------iayv 713 (1479)
+|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+ ++|+
T Consensus 2 ~nl~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 2 SNISKSFP---GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CceEEEeC---CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 67889985 357999999999999999999999999999999999999999999999872 7999
Q ss_pred eccCcCC-CCcHHHHHhcCCC-CChh--hHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCC
Q 000463 714 AQTSWIQ-NGTIEENILFGLP-MNRA--KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1479)
Q Consensus 714 ~Q~~~i~-~~Tv~enI~fg~~-~~~~--~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 789 (1479)
+|++.++ +.|++||+.++.. .... ..++..+ ...+-++.+.. ......+..+|||||||||+||||++.+|+
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l--~~~~~~~~~~LSgGq~qrv~lA~al~~~p~ 154 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR--DTKAIFDELDI--DIDPRAKVATLSVSQMQMIEIAKAFSYNAK 154 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHH--HHHHHHHHcCC--CCCccCchhhCCHHHHHHHHHHHHHHhCCC
Confidence 9998654 5799999998642 1100 0011111 12223333322 223456788999999999999999999999
Q ss_pred EEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhcCcchHHHHHH
Q 000463 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGMDFGALVAA 868 (1479)
Q Consensus 790 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~ 868 (1479)
++||||||++||+.+.+.+++.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+.+++..
T Consensus 155 lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~----------- 223 (491)
T PRK10982 155 IVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTM----------- 223 (491)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCH-----------
Confidence 999999999999999999987666555568999999999999865 89999999999987665322100
Q ss_pred hhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHHHhcCcchHHHHHHHHHHhhhh
Q 000463 869 HETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCTEAYGW 948 (1479)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~ 948 (1479)
++ .....
T Consensus 224 ---------------------------------------------------------~~-------------~~~~~--- 230 (491)
T PRK10982 224 ---------------------------------------------------------DK-------------IIAMM--- 230 (491)
T ss_pred ---------------------------------------------------------HH-------------HHHHH---
Confidence 00 00000
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 949 WGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILR 1028 (1479)
Q Consensus 949 ~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~ 1028 (1479)
T Consensus 231 -------------------------------------------------------------------------------- 230 (491)
T PRK10982 231 -------------------------------------------------------------------------------- 230 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1029 SILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYL 1108 (1479)
Q Consensus 1029 ~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~ 1108 (1479)
T Consensus 231 -------------------------------------------------------------------------------- 230 (491)
T PRK10982 231 -------------------------------------------------------------------------------- 230 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 000463 1109 STSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLA 1188 (1479)
Q Consensus 1109 ~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~ 1188 (1479)
++
T Consensus 231 ---------------------------------~~--------------------------------------------- 232 (491)
T PRK10982 231 ---------------------------------VG--------------------------------------------- 232 (491)
T ss_pred ---------------------------------hC---------------------------------------------
Confidence 00
Q ss_pred HHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccE
Q 000463 1189 TLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNV 1268 (1479)
Q Consensus 1189 ~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I 1268 (1479)
. . + .+ ..+.+. .+ +....|
T Consensus 233 --------~---~-------------------------------~---~~-----~~~~~~--------~~---~~~~~i 251 (491)
T PRK10982 233 --------R---S-------------------------------L---TQ-----RFPDKE--------NK---PGEVIL 251 (491)
T ss_pred --------C---C-------------------------------c---cc-----cccccc--------CC---CCCcEE
Confidence 0 0 0 00 000000 00 111258
Q ss_pred EEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh-hhcceEE
Q 000463 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD-LRSRFGI 1347 (1479)
Q Consensus 1269 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i~i 1347 (1479)
+++|++++| +.+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+... +|+.+++
T Consensus 252 ~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~ 327 (491)
T PRK10982 252 EVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFAL 327 (491)
T ss_pred EEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCEE
Confidence 999999985 24899999999999999999999999999999999999999999999999998776544 5778999
Q ss_pred EcCccc---ccc-ccHhhh-----cCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1348 IPQEPV---LFE-GTVRSN-----IDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1348 IpQdp~---LF~-gTIR~N-----Ldp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
+||++. +|. .|+++| +... +..+ ++++.++++..++.+ +.+|.++ .+||||||
T Consensus 328 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LSgGq~ 397 (491)
T PRK10982 328 VTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKT------PGHRTQI----GSLSGGNQ 397 (491)
T ss_pred cCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccC------CCccccc----ccCCcHHH
Confidence 999963 565 377666 3211 1112 223455555555521 1233333 46999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++||||++++|+||||||||++||+.+.+.+.+.|++.. ++.|||+|||+++.+.. ||||++|++|+
T Consensus 398 qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~ 468 (491)
T PRK10982 398 QKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGL 468 (491)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCE
Confidence 99999999999999999999999999999999999998753 57899999999999976 99999999985
No 70
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.1e-63 Score=624.59 Aligned_cols=434 Identities=21% Similarity=0.299 Sum_probs=328.2
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------E
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------T 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------i 710 (1479)
.|+++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 4889999999953 46999999999999999999999999999999999999999999998762 6
Q ss_pred EEEeccCcC---------CCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHH
Q 000463 711 AYVAQTSWI---------QNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1479)
Q Consensus 711 ayv~Q~~~i---------~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1479)
+|++|++-. +..|++||+.++.. +.++.++. ++.+... .....+..+|||||||||+||
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------l~~~~l~--~~~~~~~~~LSgG~~qrv~la 147 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQL---------AQQFGIT--ALLDRRFKYLSTGETRKTLLC 147 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHH---------HHHcCCH--hhhhCCcccCCHHHHHHHHHH
Confidence 899998642 14689998876421 11122222 2232221 123467789999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhcCc
Q 000463 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGM 860 (1479)
Q Consensus 782 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~ 860 (1479)
||++.+|+++||||||++||+...+.+.+.+.+...+|+|+|++||+++++.. ||+|++|++|+++..|+++++.+..
T Consensus 148 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~- 226 (490)
T PRK10938 148 QALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA- 226 (490)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch-
Confidence 99999999999999999999999999988766655568999999999999865 8999999999999888766543210
Q ss_pred chHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHHHhcCcchHHHHHH
Q 000463 861 DFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKI 940 (1479)
Q Consensus 861 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~ 940 (1479)
.+. .. . +.
T Consensus 227 ----~~~----------------------------------~~-------~-------------------~~-------- 234 (490)
T PRK10938 227 ----LVA----------------------------------QL-------A-------------------HS-------- 234 (490)
T ss_pred ----hhh----------------------------------hh-------h-------------------hh--------
Confidence 000 00 0 00
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 941 YCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQ 1020 (1479)
Q Consensus 941 y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~ 1020 (1479)
... .. ..
T Consensus 235 --~~~-------------------------------~~-~~--------------------------------------- 241 (490)
T PRK10938 235 --EQL-------------------------------EG-VQ--------------------------------------- 241 (490)
T ss_pred --hcc-------------------------------Cc-cc---------------------------------------
Confidence 000 00 00
Q ss_pred HHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000463 1021 IFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWAN 1100 (1479)
Q Consensus 1021 ~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~ 1100 (1479)
T Consensus 242 -------------------------------------------------------------------------------- 241 (490)
T PRK10938 242 -------------------------------------------------------------------------------- 241 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHH
Q 000463 1101 YWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELL 1180 (1479)
Q Consensus 1101 ~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l 1180 (1479)
.|
T Consensus 242 ----------------------~~-------------------------------------------------------- 243 (490)
T PRK10938 242 ----------------------LP-------------------------------------------------------- 243 (490)
T ss_pred ----------------------cC--------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCC
Q 000463 1181 GSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPP 1260 (1479)
Q Consensus 1181 ~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~ 1260 (1479)
. ..+... ... .+
T Consensus 244 ----------------~------------------------------------------------~~~~~~--~~~-~~- 255 (490)
T PRK10938 244 ----------------E------------------------------------------------PDEPSA--RHA-LP- 255 (490)
T ss_pred ----------------c------------------------------------------------cccccc--ccc-cC-
Confidence 0 000000 000 00
Q ss_pred CCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-CccEEEEcCEecCC-CCh
Q 000463 1261 NWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-SGGRIIIDGIDISL-LGL 1338 (1479)
Q Consensus 1261 ~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-~~G~I~IDG~dI~~-i~l 1338 (1479)
+....++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.. ...
T Consensus 256 --~~~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~ 331 (490)
T PRK10938 256 --ANEPRIVLNNGVVSYND--RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETI 331 (490)
T ss_pred --CCCceEEEeceEEEECC--eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCH
Confidence 01125999999999964 3499999999999999999999999999999999998876 69999999987632 233
Q ss_pred hhhhcceEEEcCcccccc---ccHhhhcCC--C------CCCC---HHHHHHHHHHcCchH-HHHhCcCCccccccCCCC
Q 000463 1339 HDLRSRFGIIPQEPVLFE---GTVRSNIDP--I------GQYS---DEEIWKSLERCQLKD-VVAAKPDKLDSLVADSGD 1403 (1479)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~---gTIR~NLdp--~------~~~s---d~eI~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~ 1403 (1479)
...|++++++||++.++. .|+++++.. . .... ++++.++++.+++.+ ... .++ .
T Consensus 332 ~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~----~ 400 (490)
T PRK10938 332 WDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKRTAD-------APF----H 400 (490)
T ss_pred HHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchhhcc-------Cch----h
Confidence 456889999999987642 477777642 1 1111 245778888888764 322 222 3
Q ss_pred CCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-C-cEEEEEccChhhhhh--cCEEEEEeCCC
Q 000463 1404 NWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-A-CTIISIAHRIPTVMD--CDRVIVVDAGL 1479 (1479)
Q Consensus 1404 nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~-~-~TvI~IAHRl~ti~~--~DrIlVL~~G~ 1479 (1479)
.||||||||++|||||+++|+||||||||++||+++.+.+.+.|++..+ + +|||+|||+++.+.. ||+|++|++|+
T Consensus 401 ~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~ 480 (490)
T PRK10938 401 SLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGD 480 (490)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCc
Confidence 6899999999999999999999999999999999999999999998753 3 479999999999975 79999999996
No 71
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-59 Score=557.73 Aligned_cols=529 Identities=22% Similarity=0.270 Sum_probs=417.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 332 FTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITSLYRK 411 (1479)
Q Consensus 332 ~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR~~L~~~Iy~K 411 (1479)
..+++.++..++...+-.++-..++-+-..+. ...-+.++++++++.++.+++.---....++.+.++|..|...+++|
T Consensus 4 i~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~-~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~ 82 (559)
T COG4988 4 ISALLAVLSGIAIIAQAALLADILTKLIEGQL-FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDK 82 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666777777777777766664433321 22234455566666777777776666777899999999999999999
Q ss_pred HhcCChhhhccCCHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 412 GLRLSCSARQAHGVGQIVNYMAVDAQQLSDMM----LQLHAVWLMPLQISVALILLYNCLGASVITTVVGIIGVMIFVVM 487 (1479)
Q Consensus 412 ~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~----~~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~il~~~~~~~ 487 (1479)
..+++...-+...+|++.++++.-++.+..++ ..+...-..|+-+.++++++.+.-|.-.+..+..+.+.| +.
T Consensus 83 l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfM---il 159 (559)
T COG4988 83 LAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFM---IL 159 (559)
T ss_pred HHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH---HH
Confidence 99999888888899999999999999987765 344455567777777777776554544443333333333 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 488 GTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRI----LSFRESEFGWLTKFMYSISGNIIVMWSTPV 563 (1479)
Q Consensus 488 ~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I----~~~R~~El~~l~k~~~~~a~~~~~~~~~p~ 563 (1479)
+++..++..+++++.-..=-...-+-|+|+.++|.|+-.+...++| ++.|+.-|+.+|-.....++.-++. +..+
T Consensus 160 vg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa-~lsi 238 (559)
T COG4988 160 VGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFA-YLSI 238 (559)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 4555555566666655555556678899999999999766555555 7799999999887665555444433 2333
Q ss_pred HHHHHHHHHHHHhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccc-ccCCCC
Q 000463 564 LISTLTFATALLFG-VPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVER-VEGCDD 641 (1479)
Q Consensus 564 ~v~~~tF~~~~l~~-~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~-~~~~~~ 641 (1479)
.+..+.++.. +.+ ++++....|.+|-+---.-.|++.+...+..-.++..+.+++..|++.++......+. ......
T Consensus 239 AlvAv~~g~~-ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~ 317 (559)
T COG4988 239 ALVAVYIGFR-LLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEP 317 (559)
T ss_pred HHHHHHHHHH-HHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCC
Confidence 3333444443 455 5899999999998888888999999999999999999999999999988764433221 111112
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1479)
...++.+|++|.|++. +++++|+||++++|+++||||+||||||||+++|+|+.+|++|+|.++|
T Consensus 318 ~~ei~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k 395 (559)
T COG4988 318 PIEISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRK 395 (559)
T ss_pred CceeeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHh
Confidence 3445566999999753 3899999999999999999999999999999999999999999999998
Q ss_pred eEEEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 709 TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 709 ~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
+++||+|+|.|+.+|+||||.++.+ -+++...++++..++.+.++. |.|.+|.+||+|.+|||||+|||+||||++++
T Consensus 396 ~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~ 474 (559)
T COG4988 396 QISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSP 474 (559)
T ss_pred HeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCC
Confidence 3899999999999999999999988 456677788999999988888 99999999999999999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHH
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVA 867 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~ 867 (1479)
+++||||||||+||+++++.|.+. +..+.++||+|+|||+++.+..+|+|++|++|+++++|+++++.++++.|.+++.
T Consensus 475 ~~l~llDEpTA~LD~etE~~i~~~-l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~ 553 (559)
T COG4988 475 ASLLLLDEPTAHLDAETEQIILQA-LQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLK 553 (559)
T ss_pred CCEEEecCCccCCCHhHHHHHHHH-HHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHH
Confidence 999999999999999999888764 4455577999999999999999999999999999999999999999999999987
Q ss_pred Hhh
Q 000463 868 AHE 870 (1479)
Q Consensus 868 ~~~ 870 (1479)
+++
T Consensus 554 ~q~ 556 (559)
T COG4988 554 QQE 556 (559)
T ss_pred HHh
Confidence 643
No 72
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.8e-59 Score=596.78 Aligned_cols=534 Identities=24% Similarity=0.317 Sum_probs=413.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 326 FWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLI 405 (1479)
Q Consensus 326 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR~~L~ 405 (1479)
++ .+....++.++..++....|.++..+++.+.. + ......+...+++..++..++.....+....++.++...+.
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr 88 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA-D--LGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLR 88 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-h--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 78888888899999999999999999987761 1 11112222223333334444444445555566688888888
Q ss_pred HHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000463 406 TSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWL-MPLQISVALILLYNCLGAS-VITTVVGIIGVMI 483 (1479)
Q Consensus 406 ~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~~~~w~-~plqi~lal~lL~~~lG~s-~l~gl~~~il~~~ 483 (1479)
..+|+|.++++....+++..|++++.++.|++.+.+.+........ .++-++..+++++ .++|. +++.++..+++..
T Consensus 89 ~~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~l~~~~~~~~~~~ 167 (567)
T COG1132 89 RDLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLF-SLSWRLALILLLILPLLAL 167 (567)
T ss_pred HHHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHH
Confidence 9999999999998888889999999999999999998876522222 2333333333332 33332 2222222233333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000463 484 FVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNI-IVMWSTP 562 (1479)
Q Consensus 484 ~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~-~~~~~~p 562 (1479)
+..++.++.++...+..+..++..+.+.|.++|++++|.|+.|+...++..+..++..+.-.+.....+... .......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (567)
T COG1132 168 VLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSS 247 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556788888888889999999999999999999999997766655544443333222222222221 1111111
Q ss_pred -HHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccccCCCC
Q 000463 563 -VLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDD 641 (1479)
Q Consensus 563 -~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~ 641 (1479)
..+.++..+.+....+.++.+.+.+.+.++..+..|+..+...+..+.++..|.+|+.++++.++...+.... ....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--~~~~ 325 (567)
T COG1132 248 LGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP--LKDT 325 (567)
T ss_pred HHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC--CCCC
Confidence 1223334555555667799999999999999999999999999999999999999999999985532211111 1123
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1479)
+..|+++|++|+|++ ++++|+|+||++++||.+|||||+|||||||++.|+|+++|++|+|.++|
T Consensus 326 ~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~ 403 (567)
T COG1132 326 IGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRK 403 (567)
T ss_pred CCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHH
Confidence 356999999999974 45899999999999999999999999999999999999999999999988
Q ss_pred eEEEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 709 TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 709 ~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
+++||||+|++|++||+|||.+|.+ .+++...++++.+++.+.++.+|+|.+|.+||+|.+||||||||++||||+++|
T Consensus 404 ~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~ 483 (567)
T COG1132 404 RIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRN 483 (567)
T ss_pred hccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcC
Confidence 3899999999999999999999988 466677778888888899999999999999999999999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHH
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVA 867 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~ 867 (1479)
|+|++||||||+||+++.+.|.+.+. ...++||+|+|+|+++.+..||+|+||++|+|++.|+++|+++.++.|.++..
T Consensus 484 ~~ILILDEaTSalD~~tE~~I~~~l~-~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~~g~y~~l~~ 562 (567)
T COG1132 484 PPILILDEATSALDTETEALIQDALK-KLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAKGGLYARLYQ 562 (567)
T ss_pred CCEEEEeccccccCHHhHHHHHHHHH-HHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHcCCHHHHHHH
Confidence 99999999999999999999987665 44478999999999999999999999999999999999999999999998876
Q ss_pred Hh
Q 000463 868 AH 869 (1479)
Q Consensus 868 ~~ 869 (1479)
.+
T Consensus 563 ~~ 564 (567)
T COG1132 563 AQ 564 (567)
T ss_pred Hh
Confidence 54
No 73
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3.8e-59 Score=593.43 Aligned_cols=538 Identities=20% Similarity=0.249 Sum_probs=412.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 322 LLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIR 401 (1479)
Q Consensus 322 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR 401 (1479)
.++.+++.++...++.++..++..+.|++++.++|.+..++. . ..++..+++..++..+......+...+++.++|
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD-V---LPTLALWAGFGVFNTIAYVLVAREADRLAHGRR 88 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456678888888889999999999999999999997654321 1 111111122223333333333455668888899
Q ss_pred HHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 402 CTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVGIIG 480 (1479)
Q Consensus 402 ~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~il 480 (1479)
..+...+|+|.++++....+++++|++++.++.|++.+.+++. .+..+....+.+++++++++..-..-+++.++++++
T Consensus 89 ~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~ 168 (585)
T TIGR01192 89 ATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGIL 168 (585)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988889999999999999999987654 333334444444444333332111222222333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
Q 000463 481 VMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRES----EFGWLTKFMYSISGNII 556 (1479)
Q Consensus 481 ~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~----El~~l~k~~~~~a~~~~ 556 (1479)
...+...+.++.++.+++..+..++..+.+.|.++|+++||.++.|+.+.++..+.-++ +.+..+..........+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (585)
T TIGR01192 169 YILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRM 248 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444556677777788888888889999999999999999999999887777654443 22222222222222211
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccc
Q 000463 557 VMWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERV 636 (1479)
Q Consensus 557 ~~~~~p~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~ 636 (1479)
+.... .+.++.++.+....+.++.+.+++.+.++..+..|+..+...+..+.+++++++|+.++++.++..++.....
T Consensus 249 ~~~~~--~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~ 326 (585)
T TIGR01192 249 ASTIS--MMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPADAP 326 (585)
T ss_pred HHHHH--HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCccCC
Confidence 11111 2334456777777889999999999999999999999999999999999999999999997653221111100
Q ss_pred cCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------
Q 000463 637 EGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------- 708 (1479)
Q Consensus 637 ~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------- 708 (1479)
+.......++++|++|+|++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 327 ~~~~~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~ 404 (585)
T TIGR01192 327 ELPNVKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTR 404 (585)
T ss_pred CCCCCCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCH
Confidence 11112346999999999964 24689999999999999999999999999999999999999999999987
Q ss_pred -----eEEEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHH
Q 000463 709 -----TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLAR 782 (1479)
Q Consensus 709 -----~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 782 (1479)
.++||||+|+++++|++|||.++.+ .+++...++++.+++.+.+..+|.|.+|.+|++|.+||||||||++|||
T Consensus 405 ~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lAR 484 (585)
T TIGR01192 405 ESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIAR 484 (585)
T ss_pred HHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHH
Confidence 3799999999999999999999865 3455566677777888889999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcch
Q 000463 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDF 862 (1479)
Q Consensus 783 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f 862 (1479)
|++++|+++|||||||+||+++++.+.+.+ ....+++|+|+|||+++.++.||+|++|++|++++.|+++++.++++.|
T Consensus 485 all~~p~ililDEpts~LD~~~~~~i~~~l-~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y 563 (585)
T TIGR01192 485 AILKNAPILVLDEATSALDVETEARVKNAI-DALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKDGRF 563 (585)
T ss_pred HHhcCCCEEEEECCccCCCHHHHHHHHHHH-HHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCCChH
Confidence 999999999999999999999999997655 4445799999999999999999999999999999999999999988888
Q ss_pred HHHHHH
Q 000463 863 GALVAA 868 (1479)
Q Consensus 863 ~~l~~~ 868 (1479)
.++...
T Consensus 564 ~~l~~~ 569 (585)
T TIGR01192 564 YKLLRR 569 (585)
T ss_pred HHHHHh
Confidence 887654
No 74
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.1e-61 Score=613.36 Aligned_cols=467 Identities=21% Similarity=0.287 Sum_probs=325.8
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--eEEEEeccCcCC
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--TTAYVAQTSWIQ 720 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~iayv~Q~~~i~ 720 (1479)
..++++|++++|++ ++++|+|+||+|++|++++|+|+||||||||+++|+|+.+|++|+|.+++ .++|++|+|+++
T Consensus 3 ~~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~ 80 (552)
T TIGR03719 3 YIYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLD 80 (552)
T ss_pred EEEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCC
Confidence 36899999999952 34799999999999999999999999999999999999999999999875 699999999876
Q ss_pred -CCcHHHHHhcCCCC------------------Ch---------hhHHHHHHHhch-------HHHHHhcccCCcccccc
Q 000463 721 -NGTIEENILFGLPM------------------NR---------AKYGEVVRVCCL-------EKDLEMMEYGDQTEIGE 765 (1479)
Q Consensus 721 -~~Tv~enI~fg~~~------------------~~---------~~~~~v~~~~~l-------~~dl~~l~~gd~t~ig~ 765 (1479)
+.|++|||.++... +. .++.+.++.++. .+-++.+... ....
T Consensus 81 ~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~---~~~~ 157 (552)
T TIGR03719 81 PTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCP---PWDA 157 (552)
T ss_pred CCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCC---cccC
Confidence 56999999886321 00 011112222221 1112222221 1356
Q ss_pred CCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCC
Q 000463 766 RGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREG 844 (1479)
Q Consensus 766 ~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G 844 (1479)
+..+|||||||||+||||++.+|+++||||||++||+++.+.+.+.+.+ . ++|+|+|||+++++.. ||++++|++|
T Consensus 158 ~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~-~--~~tvIiisHd~~~~~~~~d~v~~l~~g 234 (552)
T TIGR03719 158 DVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQE-Y--PGTVVAVTHDRYFLDNVAGWILELDRG 234 (552)
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHh-C--CCeEEEEeCCHHHHHhhcCeEEEEECC
Confidence 7789999999999999999999999999999999999999988765433 2 3699999999999876 8999999999
Q ss_pred EEE-EecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhh
Q 000463 845 MIV-QSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLI 923 (1479)
Q Consensus 845 ~i~-~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 923 (1479)
+++ ..|+++++.+... ...+.. .
T Consensus 235 ~i~~~~g~~~~~~~~~~----------~~~~~~----------------------------------------------~ 258 (552)
T TIGR03719 235 RGIPWEGNYSSWLEQKE----------KRLEQE----------------------------------------------E 258 (552)
T ss_pred EEEEecCCHHHHHHHHH----------HHHHHH----------------------------------------------H
Confidence 975 7788877653100 000000 0
Q ss_pred hHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHH
Q 000463 924 KEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVI 1003 (1479)
Q Consensus 924 ~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~ 1003 (1479)
.+.++ +...+....
T Consensus 259 ~~~~~---------~~~~~~~~~--------------------------------------------------------- 272 (552)
T TIGR03719 259 KEESA---------RQKALKREL--------------------------------------------------------- 272 (552)
T ss_pred HHHHH---------HHHHHHHHH---------------------------------------------------------
Confidence 00000 000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1004 LVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITC 1083 (1479)
Q Consensus 1004 ~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~ 1083 (1479)
T Consensus 273 -------------------------------------------------------------------------------- 272 (552)
T TIGR03719 273 -------------------------------------------------------------------------------- 272 (552)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhH
Q 000463 1084 QYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMD 1163 (1479)
Q Consensus 1084 ~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~ 1163 (1479)
....+ .+.. .+ + +.
T Consensus 273 ----------------------------~~~~~------~~~~---~~---------~---------~~----------- 286 (552)
T TIGR03719 273 ----------------------------EWVRS------SPKA---RQ---------A---------KS----------- 286 (552)
T ss_pred ----------------------------HHHHh------hhhh---HH---------H---------HH-----------
Confidence 00000 0000 00 0 00
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Q 000463 1164 FHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFT 1243 (1479)
Q Consensus 1164 ~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~ 1243 (1479)
+......++..+.
T Consensus 287 ------------------------------------------------------------------~~~~~~~~~~~~~- 299 (552)
T TIGR03719 287 ------------------------------------------------------------------KARLARYEELLSQ- 299 (552)
T ss_pred ------------------------------------------------------------------HHHHHHHHhhhhh-
Confidence 0000000111110
Q ss_pred cCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCc
Q 000463 1244 EIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSG 1323 (1479)
Q Consensus 1244 ~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~ 1323 (1479)
.++..+.......+...-+.+..++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+|++
T Consensus 300 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~ 376 (552)
T TIGR03719 300 -EFQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGD--KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDS 376 (552)
T ss_pred -cccccCCCceeecCCCCCCCCeEEEEeeEEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCC
Confidence 00000000000000000011235999999999964 359999999999999999999999999999999999999999
Q ss_pred cEEEEcCEecCCCChhhhhcceEEEcCccc-ccc-ccHhhhcCCCC---CC--CHHHHHHHHHHcCchHHHHhCcCCccc
Q 000463 1324 GRIIIDGIDISLLGLHDLRSRFGIIPQEPV-LFE-GTVRSNIDPIG---QY--SDEEIWKSLERCQLKDVVAAKPDKLDS 1396 (1479)
Q Consensus 1324 G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~-LF~-gTIR~NLdp~~---~~--sd~eI~~aL~~~~L~~~i~~lp~gLdt 1396 (1479)
|+|.+++ + .+|+++||++. ++. -|+++|+.... .. .+.+..++++..++.+.. .+.
T Consensus 377 G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~ 439 (552)
T TIGR03719 377 GTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGSD------QQK 439 (552)
T ss_pred eEEEECC-c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChhH------hcC
Confidence 9999964 2 16999999973 664 49999996321 11 134456677777764321 122
Q ss_pred cccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEE
Q 000463 1397 LVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVV 1475 (1479)
Q Consensus 1397 ~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL 1475 (1479)
++ ..||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++. . .|||+|||+++.+.. ||||++|
T Consensus 440 ~~----~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~d~i~~l 513 (552)
T TIGR03719 440 KV----GQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIATHILAF 513 (552)
T ss_pred ch----hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhCCEEEEE
Confidence 22 369999999999999999999999999999999999999999999986 3 589999999999987 9999999
Q ss_pred eCC
Q 000463 1476 DAG 1478 (1479)
Q Consensus 1476 ~~G 1478 (1479)
++|
T Consensus 514 ~~~ 516 (552)
T TIGR03719 514 EGD 516 (552)
T ss_pred ECC
Confidence 864
No 75
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.2e-61 Score=610.45 Aligned_cols=466 Identities=21% Similarity=0.289 Sum_probs=325.2
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--eEEEEeccCcCC
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--TTAYVAQTSWIQ 720 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~iayv~Q~~~i~ 720 (1479)
..|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ .++||+|+|.++
T Consensus 5 ~~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~ 82 (556)
T PRK11819 5 YIYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQLD 82 (556)
T ss_pred EEEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCC
Confidence 36899999999952 35799999999999999999999999999999999999999999999864 699999999876
Q ss_pred C-CcHHHHHhcCCC-CCh--hh---------------------HHHHHHH----------hchHHHHHhcccCCcccccc
Q 000463 721 N-GTIEENILFGLP-MNR--AK---------------------YGEVVRV----------CCLEKDLEMMEYGDQTEIGE 765 (1479)
Q Consensus 721 ~-~Tv~enI~fg~~-~~~--~~---------------------~~~v~~~----------~~l~~dl~~l~~gd~t~ig~ 765 (1479)
+ .|++||+.++.. +.. .. +.+..+. ....+.++.+... ....
T Consensus 83 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---~~~~ 159 (556)
T PRK11819 83 PEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCP---PWDA 159 (556)
T ss_pred CCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCC---cccC
Confidence 4 599999988631 000 00 0000000 0111222333221 2356
Q ss_pred CCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCC
Q 000463 766 RGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREG 844 (1479)
Q Consensus 766 ~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G 844 (1479)
+..+|||||||||+||||++.+|+++|||||||+||+.+.+.+.+.+. .. +.|+|+|||+++++.. ||+|++|++|
T Consensus 160 ~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~-~~--~~tviiisHd~~~~~~~~d~i~~l~~g 236 (556)
T PRK11819 160 KVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLH-DY--PGTVVAVTHDRYFLDNVAGWILELDRG 236 (556)
T ss_pred chhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHH-hC--CCeEEEEeCCHHHHHhhcCeEEEEeCC
Confidence 778999999999999999999999999999999999999998876443 33 3599999999999876 8999999999
Q ss_pred EEE-EecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhh
Q 000463 845 MIV-QSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLI 923 (1479)
Q Consensus 845 ~i~-~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 923 (1479)
+++ +.|+++++.+... ...+.. .
T Consensus 237 ~i~~~~g~~~~~~~~~~----------~~~~~~----------------------------------------------~ 260 (556)
T PRK11819 237 RGIPWEGNYSSWLEQKA----------KRLAQE----------------------------------------------E 260 (556)
T ss_pred EEEEecCCHHHHHHHHH----------HHHHHH----------------------------------------------H
Confidence 986 7788877643100 000000 0
Q ss_pred hHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHH
Q 000463 924 KEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVI 1003 (1479)
Q Consensus 924 ~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~ 1003 (1479)
.+.++.. ..++...
T Consensus 261 ~~~~~~~---------~~~~~~~--------------------------------------------------------- 274 (556)
T PRK11819 261 KQEAARQ---------KALKREL--------------------------------------------------------- 274 (556)
T ss_pred HHHHHHH---------HHHHHHH---------------------------------------------------------
Confidence 0000000 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1004 LVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITC 1083 (1479)
Q Consensus 1004 ~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~ 1083 (1479)
T Consensus 275 -------------------------------------------------------------------------------- 274 (556)
T PRK11819 275 -------------------------------------------------------------------------------- 274 (556)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhH
Q 000463 1084 QYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMD 1163 (1479)
Q Consensus 1084 ~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~ 1163 (1479)
+..++ ++.. + .. +
T Consensus 275 ----------------------------~~~~~------~~~~-------------~----~~----~------------ 287 (556)
T PRK11819 275 ----------------------------EWVRQ------SPKA-------------R----QA----K------------ 287 (556)
T ss_pred ----------------------------HHHHH------hhhh-------------h----HH----H------------
Confidence 00000 0000 0 00 0
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Q 000463 1164 FHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFT 1243 (1479)
Q Consensus 1164 ~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~ 1243 (1479)
.+......+|..+.
T Consensus 288 -----------------------------------------------------------------~~~~~~~~~~~~~~- 301 (556)
T PRK11819 288 -----------------------------------------------------------------SKARLARYEELLSE- 301 (556)
T ss_pred -----------------------------------------------------------------HHHHHHHHHHhhcc-
Confidence 00000000111110
Q ss_pred cCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCc
Q 000463 1244 EIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSG 1323 (1479)
Q Consensus 1244 ~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~ 1323 (1479)
.+.+.+.......++...+...-++++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+|++
T Consensus 302 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~ 378 (556)
T PRK11819 302 -EYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGD--RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDS 378 (556)
T ss_pred -cccccCCCceeecCCCCCCCCeEEEEEeEEEEECC--eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCC
Confidence 00000000000001111112335999999999964 359999999999999999999999999999999999999999
Q ss_pred cEEEEcCEecCCCChhhhhcceEEEcCcc-ccccc-cHhhhcCCCC---C--CCHHHHHHHHHHcCchHHHHhCcCCccc
Q 000463 1324 GRIIIDGIDISLLGLHDLRSRFGIIPQEP-VLFEG-TVRSNIDPIG---Q--YSDEEIWKSLERCQLKDVVAAKPDKLDS 1396 (1479)
Q Consensus 1324 G~I~IDG~dI~~i~l~~LR~~i~iIpQdp-~LF~g-TIR~NLdp~~---~--~sd~eI~~aL~~~~L~~~i~~lp~gLdt 1396 (1479)
|+|.+++ + .+|+|+||++ .++.. |+++|+.... . ..+++..++++..++.+.. .+.
T Consensus 379 G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~ 441 (556)
T PRK11819 379 GTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGGD------QQK 441 (556)
T ss_pred eEEEECC-c----------eEEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChhH------hcC
Confidence 9999964 2 1699999997 56654 9999996321 1 1234556778877774311 122
Q ss_pred cccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEE
Q 000463 1397 LVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVV 1475 (1479)
Q Consensus 1397 ~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL 1475 (1479)
.+ ..||||||||++||||++.+|++|||||||++||+.+...+.+.|++. . .|||+|||+++.+.. ||||++|
T Consensus 442 ~~----~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l 515 (556)
T PRK11819 442 KV----GVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAF 515 (556)
T ss_pred ch----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 22 369999999999999999999999999999999999999999999885 3 489999999999887 9999999
Q ss_pred eC
Q 000463 1476 DA 1477 (1479)
Q Consensus 1476 ~~ 1477 (1479)
++
T Consensus 516 ~~ 517 (556)
T PRK11819 516 EG 517 (556)
T ss_pred EC
Confidence 86
No 76
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.9e-60 Score=600.68 Aligned_cols=464 Identities=17% Similarity=0.195 Sum_probs=352.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHH
Q 000463 995 STAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYIT 1074 (1479)
Q Consensus 995 ~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~ 1074 (1479)
++.++..++.+++.++....+.+...+++.++++++++.|++||+++++|++++|+++|++.+...+. .+..++...+.
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~ 134 (547)
T PRK10522 56 GLLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIIL 134 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHH
Confidence 33344455667788888889999999999999999999999999999999999999999999987654 45666777778
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcH---HHHHHH
Q 000463 1075 LLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQ---TTFYQE 1151 (1479)
Q Consensus 1075 ~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~---~~f~~~ 1151 (1479)
+++.+++++.++|.+.++++..+++.+.+..+..+..+...+......+...+++.|.++|+.+++ ++.+ +.+.++
T Consensus 135 ~i~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~ 213 (547)
T PRK10522 135 TLGSAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENE 213 (547)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHH
Confidence 888888888999998877665555544444444444444444445667788999999999999995 5443 345555
Q ss_pred HHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHH-HHHHHHHHHhc-cCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1152 NVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTF-CLATLFMILLP-SSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFV 1229 (1479)
Q Consensus 1152 ~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~-~~~~~~~v~~~-~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~ 1229 (1479)
+.+..+...+...... ++......+..+.. .+..++.+... .+....+..+....+.+.+..++..+...+..+
T Consensus 214 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~ 289 (547)
T PRK10522 214 YEPDAQEYRHHIIRAD----TFHLSAVNWSNIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTL 289 (547)
T ss_pred HhHHHHHHHhhhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555544433322211 11111111111111 11111111111 111122233333334445567788888888899
Q ss_pred HHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHH
Q 000463 1230 ENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKS 1309 (1479)
Q Consensus 1230 e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKS 1309 (1479)
.....+.+|+.++.+.|.|.+.. ...+ -|..+.|+++||+|+|+.+ +++|+|+||+|+|||++||||+||||||
T Consensus 290 ~~~~~a~~ri~~l~~~~~~~~~~--~~~~---~~~~~~i~~~~v~f~y~~~-~~~l~~i~~~i~~G~~~aivG~sGsGKS 363 (547)
T PRK10522 290 LSAQVAFNKLNKLALAPYKAEFP--RPQA---FPDWQTLELRNVTFAYQDN-GFSVGPINLTIKRGELLFLIGGNGSGKS 363 (547)
T ss_pred HHHHHHHHHHHHHhccccccccc--cccc---cCcCceEEEEEEEEEeCCC-CeEEecceEEEcCCCEEEEECCCCCCHH
Confidence 99999999999987655432111 1111 1223679999999999743 4599999999999999999999999999
Q ss_pred HHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHh
Q 000463 1310 TLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAA 1389 (1479)
Q Consensus 1310 TLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~ 1389 (1479)
||+++|+|+++|++|+|.+||+|+++++.+++|+++++|||||.+|+||+++| ..+.+|++++++++++++.+.+..
T Consensus 364 TL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~ 440 (547)
T PRK10522 364 TLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL 440 (547)
T ss_pred HHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc
Confidence 99999999999999999999999999999999999999999999999999999 236788999999999999887653
Q ss_pred CcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhh
Q 000463 1390 KPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVM 1467 (1479)
Q Consensus 1390 lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~ 1467 (1479)
++|. .+|.+||||||||++||||++++|+|||||||||+||+++++.|.+.+.+.. +++|+|+||||++++.
T Consensus 441 -~~~~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~ 514 (547)
T PRK10522 441 -EDGR-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFI 514 (547)
T ss_pred -cccC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHH
Confidence 4442 2488999999999999999999999999999999999999999999998665 4899999999999999
Q ss_pred hcCEEEEEeCCC
Q 000463 1468 DCDRVIVVDAGL 1479 (1479)
Q Consensus 1468 ~~DrIlVL~~G~ 1479 (1479)
.||+|++|++|+
T Consensus 515 ~~d~i~~l~~G~ 526 (547)
T PRK10522 515 HADRLLEMRNGQ 526 (547)
T ss_pred hCCEEEEEECCE
Confidence 999999999995
No 77
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=2.8e-59 Score=590.97 Aligned_cols=508 Identities=19% Similarity=0.203 Sum_probs=393.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 326 FWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTS-GKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTL 404 (1479)
Q Consensus 326 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR~~L 404 (1479)
+|+.++...++.++..++..+.|+++..++|.+. ++. ....-+.+++.+++..++..++.....+...+++.++...+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (529)
T TIGR02857 1 ARRALALLGLLGALGALLIIAQAWLLARVIDGLISAGE-PLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQL 79 (529)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777888889999999999999999999773 322 11222334444555555666666666677778889999999
Q ss_pred HHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Q 000463 405 ITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLY---NCLGASVITTVVGIIG 480 (1479)
Q Consensus 405 ~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~---~~lG~s~l~gl~~~il 480 (1479)
...+|+|.++++.....++++|+++|.++.|++++.+++. .+..+....+.+++++++++ ..+++..+++ +++
T Consensus 80 r~~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~---~~l 156 (529)
T TIGR02857 80 RERLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLT---APL 156 (529)
T ss_pred HHHHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH---HHH
Confidence 9999999999998888889999999999999999998764 35555555554444444333 2223222222 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 481 VMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWS 560 (1479)
Q Consensus 481 ~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~ 560 (1479)
...+.....++.++..++.++..+++.+.+.|.++|+++||.|++|+.+.++..+.-++..+...+.....+....+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (529)
T TIGR02857 157 IPIFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLEL 236 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223445677777788888899999999999999999999999999988888655443332222222212211111111
Q ss_pred HHHHH--HHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccccC
Q 000463 561 TPVLI--STLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEG 638 (1479)
Q Consensus 561 ~p~~v--~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~ 638 (1479)
...+. .++.++.+....+.++.+.+++++.+...+..|+..+...+..+.+++++++|+.++++.++.+.+... .+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~~-~~- 314 (529)
T TIGR02857 237 FATLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKAP-VT- 314 (529)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcC-CC-
Confidence 11111 112234444456789999999999999999999999999999999999999999999975432211111 11
Q ss_pred CCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe---------
Q 000463 639 CDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------- 709 (1479)
Q Consensus 639 ~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------- 709 (1479)
......|+++|++|+|++. ++++|+|+||++++||+++|+||+|||||||+++|+|+++|++|+|.++|.
T Consensus 315 ~~~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~ 393 (529)
T TIGR02857 315 AAPAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADS 393 (529)
T ss_pred CCCCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHH
Confidence 1112469999999999743 357999999999999999999999999999999999999999999999983
Q ss_pred ----EEEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 710 ----TAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 710 ----iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
++||+|+|+++++||+|||.+|.+ .+++...++++.+++.++++.+|+|.+|.+||+|.+||||||||++||||+
T Consensus 394 lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal 473 (529)
T TIGR02857 394 WRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAF 473 (529)
T ss_pred HHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHH
Confidence 899999999999999999999865 466778888999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEE
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVM 841 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l 841 (1479)
+++|+++|||||||+||+++++.+++.+. ...+++|+|+|||+++.+..||+|++|
T Consensus 474 ~~~~~ililDE~ts~lD~~~~~~i~~~l~-~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 474 LRDAPLLLLDEPTAHLDAETEALVTEALR-ALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred hcCCCEEEEeCcccccCHHHHHHHHHHHH-HhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999999987654 445789999999999999999999985
No 78
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=5e-61 Score=536.72 Aligned_cols=440 Identities=28% Similarity=0.434 Sum_probs=331.7
Q ss_pred CccEEEEeeEEEecCC-CCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC-------
Q 000463 642 NIAVEVRDGVFSWDDE-NGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~-~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g------- 708 (1479)
+..++++|++..+... ....++++|||++++||.+|+||++|||||-..++++|+++. -+|+|.++|
T Consensus 4 ~~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~s 83 (534)
T COG4172 4 MPLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAAS 83 (534)
T ss_pred CcceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCC
Confidence 3468899998888633 345789999999999999999999999999999999999975 478999887
Q ss_pred ----------eEEEEeccCcC-CC--CcHHHHHh----cCCCCChhhHHHHHHHhchHHHHHhcccC-CccccccCCCcc
Q 000463 709 ----------TTAYVAQTSWI-QN--GTIEENIL----FGLPMNRAKYGEVVRVCCLEKDLEMMEYG-DQTEIGERGINL 770 (1479)
Q Consensus 709 ----------~iayv~Q~~~i-~~--~Tv~enI~----fg~~~~~~~~~~v~~~~~l~~dl~~l~~g-d~t~ig~~g~~L 770 (1479)
+|++++|+|.- .| -||..-|. .......+.. ++.. .+-++..... -...+...+++|
T Consensus 84 e~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~A----r~r~-lelL~~VgI~~p~~rl~~yPHeL 158 (534)
T COG4172 84 ERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAA----RARA-LELLELVGIPEPEKRLDAYPHEL 158 (534)
T ss_pred HHHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHH----HHHH-HHHHHHcCCCchhhhhhhCCccc
Confidence 48999999853 23 36655553 2222222111 1111 1112221111 123456778999
Q ss_pred chHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEE
Q 000463 771 SGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQ 848 (1479)
Q Consensus 771 SGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~ 848 (1479)
||||||||.||.||..+||++|-||||.|||..+..+|.+.+.+... .|..+++||||+..+.. ||+|.||.+|++++
T Consensus 159 SGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE 238 (534)
T COG4172 159 SGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIVE 238 (534)
T ss_pred CcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEee
Confidence 99999999999999999999999999999999999999976655443 39999999999999986 89999999999999
Q ss_pred ecChHHHHhcCc-chHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHH
Q 000463 849 SGRYNALLNSGM-DFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEE 927 (1479)
Q Consensus 849 ~g~~~~l~~~~~-~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~ 927 (1479)
.|+.+++..... .|....-
T Consensus 239 ~~~t~~lF~~PqHpYTr~Ll------------------------------------------------------------ 258 (534)
T COG4172 239 TGTTETLFAAPQHPYTRKLL------------------------------------------------------------ 258 (534)
T ss_pred cCcHHHHhhCCCChHHHHHH------------------------------------------------------------
Confidence 998776653211 0000000
Q ss_pred HhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 000463 928 RETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVR 1007 (1479)
Q Consensus 928 ~~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~ 1007 (1479)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000463 1008 AYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAW 1087 (1479)
Q Consensus 1008 ~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~ 1087 (1479)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHH
Q 000463 1088 PTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNN 1167 (1479)
Q Consensus 1088 ~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~ 1167 (1479)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcc
Q 000463 1168 GSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPS 1247 (1479)
Q Consensus 1168 ~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~ 1247 (1479)
+ .
T Consensus 259 ----------------------------------------------------------------------------~--a 260 (534)
T COG4172 259 ----------------------------------------------------------------------------A--A 260 (534)
T ss_pred ----------------------------------------------------------------------------h--c
Confidence 0 0
Q ss_pred chhccccCCCCCCCCCCCccEEEEeeeeeecC---------CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcc
Q 000463 1248 EAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRS---------NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRL 1318 (1479)
Q Consensus 1248 E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~---------~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl 1318 (1479)
|+ ....+|..-...--++.+|+.+.|+- +.-.+.+||||+.++||.+||||+||||||||-++|+|+
T Consensus 261 eP----~g~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL 336 (534)
T COG4172 261 EP----SGDPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRL 336 (534)
T ss_pred CC----CCCCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhh
Confidence 00 00000000011123555555555531 112489999999999999999999999999999999999
Q ss_pred CCCCccEEEEcCEecCCCChhh---hhcceEEEcCccc--cc-cccHhhhcC----CCC-CC----CHHHHHHHHHHcCc
Q 000463 1319 VEPSGGRIIIDGIDISLLGLHD---LRSRFGIIPQEPV--LF-EGTVRSNID----PIG-QY----SDEEIWKSLERCQL 1383 (1479)
Q Consensus 1319 ~~p~~G~I~IDG~dI~~i~l~~---LR~~i~iIpQdp~--LF-~gTIR~NLd----p~~-~~----sd~eI~~aL~~~~L 1383 (1479)
.++. |+|.++|.||...+.++ +|+++-+|+|||+ |= .-||-+-|. -.. .. -|+.+.+||+.+||
T Consensus 337 ~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGL 415 (534)
T COG4172 337 IPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGL 415 (534)
T ss_pred cCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCC
Confidence 9876 99999999999998776 6899999999997 21 225544442 111 22 36779999999999
Q ss_pred hHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEcc
Q 000463 1384 KDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAH 1461 (1479)
Q Consensus 1384 ~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAH 1461 (1479)
+.-.... | ...|||||||||+||||++-+|++++||||||+||..-..+|.+.+++..+ +-+-++|+|
T Consensus 416 Dp~~r~R---Y-------PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISH 485 (534)
T COG4172 416 DPATRNR---Y-------PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISH 485 (534)
T ss_pred ChhHhhc---C-------CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 8765432 2 235899999999999999999999999999999999999999999998653 568999999
Q ss_pred Chhhhhh-cCEEEEEeCCC
Q 000463 1462 RIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1462 Rl~ti~~-~DrIlVL~~G~ 1479 (1479)
+|..++. ||+|+||.+||
T Consensus 486 DL~VvrAl~~~viVm~~Gk 504 (534)
T COG4172 486 DLAVVRALCHRVIVMRDGK 504 (534)
T ss_pred cHHHHHHhhceEEEEeCCE
Confidence 9999988 99999999996
No 79
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-60 Score=605.13 Aligned_cols=187 Identities=21% Similarity=0.362 Sum_probs=159.3
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.|+++|++++|+. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+++. .+++
T Consensus 312 ~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ig 378 (638)
T PRK10636 312 LLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKLG 378 (638)
T ss_pred eEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEEE
Confidence 5999999999963 45999999999999999999999999999999999999999999999741 2699
Q ss_pred EEcCcc--cccc-ccHhhhcCCC-CCCCHHHHHHHHHHcCchH-HHHhCcCCccccccCCCCCCCchHHHHHHHHHHhcc
Q 000463 1347 IIPQEP--VLFE-GTVRSNIDPI-GQYSDEEIWKSLERCQLKD-VVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1479)
Q Consensus 1347 iIpQdp--~LF~-gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1421 (1479)
|+||++ .+.. .|+.+++... ....++++.++|+..++.+ .... ++ ..||||||||++||||+++
T Consensus 379 y~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~-------~~----~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 379 YFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGDKVTE-------ET----RRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred EecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChhHhcC-------ch----hhCCHHHHHHHHHHHHHhc
Confidence 999985 3443 3788876321 2334567888888888753 3322 22 3699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1422 ~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+|++|||||||++||..+...+.+.|++. +.|||+|||+++.+.. ||||++|++|+
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~ 504 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGK 504 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999885 4599999999999987 99999999985
No 80
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.9e-58 Score=635.31 Aligned_cols=449 Identities=18% Similarity=0.230 Sum_probs=346.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000463 1012 THVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIF 1091 (1479)
Q Consensus 1012 ~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 1091 (1479)
...+.+....+...+++++++.|..+|++.++|+++||+++|++.++... ..+..+....+.++..++++...-....+
T Consensus 366 ~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~~~lg~~~l 444 (1495)
T PLN03232 366 GRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLYQQLGVASL 444 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 46677788888889999999999999999999999999999999999875 34444444444444333332211001111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhH
Q 000463 1092 LVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNE 1171 (1479)
Q Consensus 1092 ~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1171 (1479)
+.++++++...+..++.+..+..++.....+....+.++|.++|+++||+|++|+.+.++..+..+...+..........
T Consensus 445 ~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~ 524 (1495)
T PLN03232 445 FGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSA 524 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111122222233333334444444455566688899999999999999999999988887766665554433332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhc
Q 000463 1172 WLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1479)
Q Consensus 1172 wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~ 1251 (1479)
+..+....... ++.+..+.......+.++++.+-.++++...+..++..+......+.+..+|.+|+.++++.+++...
T Consensus 525 ~~~~~~~~~~~-~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~ 603 (1495)
T PLN03232 525 FNSFILNSIPV-VVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILA 603 (1495)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 22221111111 11112222223346678899888888888888888988888999999999999999999987654221
Q ss_pred cccCCCCCCCCCCCccEEEEeeeeeecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcC
Q 000463 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDG 1330 (1479)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG 1330 (1479)
. .+ +..+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++|.+.
T Consensus 604 ~----~~-~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~--- 675 (1495)
T PLN03232 604 Q----NP-PLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV--- 675 (1495)
T ss_pred c----cC-CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE---
Confidence 1 11 111234679999999999753 35699999999999999999999999999999999999999999763
Q ss_pred EecCCCChhhhhcceEEEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1331 IDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1331 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
.+|++|+||||+|.+|+|||||||....++++++++++++.|+++++++.+|+|+||.|||+|.|||||||
T Consensus 676 ---------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQk 746 (1495)
T PLN03232 676 ---------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQK 746 (1495)
T ss_pred ---------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHH
Confidence 46889999999999999999999998778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHH-HHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ-RIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq-~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||+||||++++|+|+|||||||+||++|++.|. +.++...+++|+|+||||++++..||+|++|++|+
T Consensus 747 QRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~ 816 (1495)
T PLN03232 747 QRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGM 816 (1495)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999874 55777778999999999999999999999999995
No 81
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.3e-58 Score=633.68 Aligned_cols=448 Identities=18% Similarity=0.250 Sum_probs=347.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000463 1012 THVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIF 1091 (1479)
Q Consensus 1012 ~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 1091 (1479)
...+.+....+...+++++++.|..++++.++|+++|++++|++.++.... .+..+....+.++..++++...-....+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l 444 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASL 444 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777778888899999999999999999999999999999999998874 3444444444444433333221111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhH
Q 000463 1092 LVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNE 1171 (1479)
Q Consensus 1092 ~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1171 (1479)
+.++++++.+.+..++.+..+..++.....+....+.++|.++|+++||+|++|+.|.++..+..+...+..........
T Consensus 445 ~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~ 524 (1622)
T PLN03130 445 IGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSA 524 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222223333333444444444444555667778899999999999999999999998887766654443332222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhc
Q 000463 1172 WLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1479)
Q Consensus 1172 wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~ 1251 (1479)
+..+....... .+.+..+.......+.++++.+-.++++...+..++..+......+....+|.+|+.+|++.+++.+.
T Consensus 525 ~~~~~~~~~~~-~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~ 603 (1622)
T PLN03130 525 FNSFILNSIPV-LVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLL 603 (1622)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 22211111111 11122222233346778999888888888888888888888899999999999999999976543211
Q ss_pred cccCCCCCCCCCCCccEEEEeeeeeecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCc-cEEEEc
Q 000463 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSG-GRIIID 1329 (1479)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~-G~I~ID 1329 (1479)
. + ++ .-+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|.+ |+|.+
T Consensus 604 ~--~--~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l- 677 (1622)
T PLN03130 604 P--N--PP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI- 677 (1622)
T ss_pred c--C--Cc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE-
Confidence 0 0 11 11234679999999999753 3569999999999999999999999999999999999999999 89973
Q ss_pred CEecCCCChhhhhcceEEEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchH
Q 000463 1330 GIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1330 G~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
|++|+||||+|.+|+|||||||....++++++++++++.|+|+++++.+|+|+||.|||+|.||||||
T Consensus 678 ------------~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQ 745 (1622)
T PLN03130 678 ------------RGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQ 745 (1622)
T ss_pred ------------cCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHH
Confidence 67999999999999999999999877889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHH-HHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI-QRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~I-q~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||||+||||++++|+|+|||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|++|++|+
T Consensus 746 KQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~ 816 (1622)
T PLN03130 746 KQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGM 816 (1622)
T ss_pred HHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999877 567877778999999999999999999999999995
No 82
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=6.6e-59 Score=595.46 Aligned_cols=188 Identities=22% Similarity=0.343 Sum_probs=158.3
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
-++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +|+
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 4899999999964 35999999999999999999999999999999999999999999999 4332 699
Q ss_pred EEcCcc-ccccc-cHhhhcCCC-CCC--C--HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1347 IIPQEP-VLFEG-TVRSNIDPI-GQY--S--DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1347 iIpQdp-~LF~g-TIR~NLdp~-~~~--s--d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
|++|++ .++.. |+++|+... ... . +.++.+.|+..++.+.. .+.++ ..||||||||++||||+
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~----~~LSgGekqRl~la~al 455 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPKR------AMTPV----KALSGGERNRLLLARLF 455 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHHH------HhChh----hhCCHHHHHHHHHHHHH
Confidence 999986 46654 999999632 111 2 45677778777774211 22233 35999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEe-CCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVD-AGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~-~G~ 1479 (1479)
+++|++|||||||++||..+...+.+.|++. ++|||+|||+.+.+.. ||+|++|+ +|+
T Consensus 456 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~ 515 (635)
T PRK11147 456 LKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGK 515 (635)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCe
Confidence 9999999999999999999999999999875 5799999999999976 99999997 774
No 83
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.2e-56 Score=618.35 Aligned_cols=472 Identities=18% Similarity=0.176 Sum_probs=365.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 393 SQKLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASV 471 (1479)
Q Consensus 393 ~~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~ 471 (1479)
....+.+.-..+...+|+|.++.+.+...+..+|+|+|.++.|++.+.+.+. .+..+...++.++.++++++..-.+.+
T Consensus 1029 ~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~ 1108 (1522)
T TIGR00957 1029 VSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAA 1108 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666777888999999999888889999999999999999998764 444555556666655555443222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 472 ITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSI 551 (1479)
Q Consensus 472 l~gl~~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~ 551 (1479)
++.++++++...+..+..+..+..++...+.+.......+|.++|+++||.|+||+.|.++..+.-+...+.........
T Consensus 1109 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 1188 (1522)
T TIGR00957 1109 VIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVAN 1188 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222233333344455555555566677789999999999999999999998887666555444322222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcc
Q 000463 552 SGNIIVMWSTPVLISTLTFATALL-FGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVN 630 (1479)
Q Consensus 552 a~~~~~~~~~p~~v~~~tF~~~~l-~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~ 630 (1479)
............++ ++..+.+.. ..+.++++.+..++.+...+..|+..+......+.++.+|.+||.+|++.++..+
T Consensus 1189 ~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~ 1267 (1522)
T TIGR00957 1189 RWLAVRLECVGNCI-VLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAP 1267 (1522)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 11111111111111 111222222 3467999999999999999999999999999999999999999999997654322
Q ss_pred cccc--cccC-CCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEEC
Q 000463 631 ESVE--RVEG-CDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVC 707 (1479)
Q Consensus 631 ~~~~--~~~~-~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~ 707 (1479)
...+ ..+. -+.++.|+++|++|+|+++ .+++|+|+||+|++||++||||++|||||||+++|+|+++|++|+|.++
T Consensus 1268 ~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~Id 1346 (1522)
T TIGR00957 1268 WQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIID 1346 (1522)
T ss_pred ccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEEC
Confidence 1111 1111 0234679999999999753 3479999999999999999999999999999999999999999999999
Q ss_pred C-------------eEEEEeccCcCCCCcHHHHHh-cCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchH
Q 000463 708 G-------------TTAYVAQTSWIQNGTIEENIL-FGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGG 773 (1479)
Q Consensus 708 g-------------~iayv~Q~~~i~~~Tv~enI~-fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGG 773 (1479)
| +++||||+|.+|++||||||. ++ +++++...++++.|++.+.+..+|.|.+|.+||+|.+||||
T Consensus 1347 G~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgG 1425 (1522)
T TIGR00957 1347 GLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVG 1425 (1522)
T ss_pred CEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHH
Confidence 8 379999999999999999998 55 56777788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChH
Q 000463 774 QKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYN 853 (1479)
Q Consensus 774 QkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~ 853 (1479)
||||++||||++++|+|+|||||||+||+++.+.|.+ .++...+++|+|+|+|+++.+..+|+|+||++|+|++.|+++
T Consensus 1426 QrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~-~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~ 1504 (1522)
T TIGR00957 1426 QRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQS-TIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPS 1504 (1522)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHH
Confidence 9999999999999999999999999999999888765 455556799999999999999999999999999999999999
Q ss_pred HHHhcCcchHHHHHH
Q 000463 854 ALLNSGMDFGALVAA 868 (1479)
Q Consensus 854 ~l~~~~~~f~~l~~~ 868 (1479)
|++++++.|.++.++
T Consensus 1505 eLl~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1505 NLLQQRGIFYSMAKD 1519 (1522)
T ss_pred HHHhCCCHHHHHHHH
Confidence 999888888888754
No 84
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.1e-57 Score=617.97 Aligned_cols=203 Identities=22% Similarity=0.316 Sum_probs=169.7
Q ss_pred cEEEEeeeeeecC-----------CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC--CccEEEEcCEec
Q 000463 1267 NVDLIDLQVRYRS-----------NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP--SGGRIIIDGIDI 1333 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~-----------~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p--~~G~I~IDG~dI 1333 (1479)
.+.|+||++.++. +...+|+|||++++|||.+||+|+||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6899999998742 223599999999999999999999999999999999999763 689999999886
Q ss_pred CCCChhhhhcceEEEcCccccccc-cHhhhcCCC------CCCCHH----HHHHHHHHcCchHHHHhCcCCccccccCCC
Q 000463 1334 SLLGLHDLRSRFGIIPQEPVLFEG-TVRSNIDPI------GQYSDE----EIWKSLERCQLKDVVAAKPDKLDSLVADSG 1402 (1479)
Q Consensus 1334 ~~i~l~~LR~~i~iIpQdp~LF~g-TIR~NLdp~------~~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1402 (1479)
. ....|+.++||+|++.++.. ||+|||... .+.+++ .+.++++..+|.+. .|+.+|..+
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 4 24567889999999987764 999999521 122333 36778888888654 356665433
Q ss_pred -CCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhh-h-hhcCEEEEEeC-
Q 000463 1403 -DNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPT-V-MDCDRVIVVDA- 1477 (1479)
Q Consensus 1403 -~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~t-i-~~~DrIlVL~~- 1477 (1479)
..||||||||++|||||+.+|+||+||||||+||+.+...|.+.|++.. +++|||+++|+++. + ..||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 5799999999999999999999999999999999999999999999865 47899999999984 4 45999999986
Q ss_pred CC
Q 000463 1478 GL 1479 (1479)
Q Consensus 1478 G~ 1479 (1479)
|+
T Consensus 1097 G~ 1098 (1470)
T PLN03140 1097 GQ 1098 (1470)
T ss_pred CE
Confidence 64
No 85
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.4e-57 Score=524.68 Aligned_cols=471 Identities=20% Similarity=0.243 Sum_probs=349.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHH
Q 000463 995 STAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYIT 1074 (1479)
Q Consensus 995 ~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~ 1074 (1479)
++.++..++..+|+..+.+.|.+.-..+....+...+++|..--...+..+.+ +|.+.+..++...-...+.-.--
T Consensus 71 ~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW 146 (580)
T COG4618 71 GLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPW 146 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCch
Confidence 44556778889999999999999999999999999988876543333333333 46666666653321111111111
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHH----H
Q 000463 1075 LLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFY----Q 1150 (1479)
Q Consensus 1075 ~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~----~ 1150 (1479)
.-..+++++.+.|++.++.+.-.++.+.+...--...++--+..++....-..+..-+..+..+|+|.|+..... +
T Consensus 147 ~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~ 226 (580)
T COG4618 147 MPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGR 226 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHH
Confidence 122334455556665554433332222222222222233333334444555678888999999999999876544 4
Q ss_pred HHHHHHHHHhhhHHHHHhHhHHH-HHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1151 ENVNRVNGNLRMDFHNNGSNEWL-GFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFV 1229 (1479)
Q Consensus 1151 ~~~~~~d~~~~~~~~~~~~~~wl-~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~ 1229 (1479)
.+.+.++.+.++.........-- .+|+ ++.+.+ ..+.+++...+.+++|.+-..--..-....++-..+..|.++
T Consensus 227 ~~~~~L~~~~~asd~~~~~~~~Sr~~Rm-~lQs~i---Lg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~ 302 (580)
T COG4618 227 FNAAYLSAQERASDRNGAFGALSRALRM-ALQSAV---LGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQF 302 (580)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHHHHH---HhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHH
Confidence 45555555544443322211100 0111 111111 222234445778888765443333334445677788899999
Q ss_pred HHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHH
Q 000463 1230 ENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKS 1309 (1479)
Q Consensus 1230 e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKS 1309 (1479)
-....|..|+.+.++..++..... +-| ..+|.+.++++++.-++..+++|+|+||+++|||-+|||||||||||
T Consensus 303 ~~Ar~s~~Rl~~lL~~~p~~~~~m----~LP--~P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKS 376 (580)
T COG4618 303 VAARQSYKRLNELLAELPAAAERM----PLP--APQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKS 376 (580)
T ss_pred HHHHHHHHHHHHHHHhCccccCCC----CCC--CCCceeeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHH
Confidence 999999999999987655443221 111 13689999999997776677899999999999999999999999999
Q ss_pred HHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCCC-CCCHHHHHHHHHHcCchHHHH
Q 000463 1310 TLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVA 1388 (1479)
Q Consensus 1310 TLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~ 1388 (1479)
||.++|.|.+.|.+|.|++||-|+++.+.+++-++|||.|||-.||+|||+|||.-|+ +.+++.|.+|.+.++.||.|.
T Consensus 377 TLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl 456 (580)
T COG4618 377 TLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELIL 456 (580)
T ss_pred HHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998877 788889999999999999999
Q ss_pred hCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhh
Q 000463 1389 AKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVM 1467 (1479)
Q Consensus 1389 ~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~ 1467 (1479)
++|+||||.|||+|..|||||||||+||||++.+|+++|||||-||||.+-|+.+.++|.+.. +++|+|+||||.+.+.
T Consensus 457 ~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~ 536 (580)
T COG4618 457 RLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALA 536 (580)
T ss_pred hCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999988764 6899999999999999
Q ss_pred hcCEEEEEeCCC
Q 000463 1468 DCDRVIVVDAGL 1479 (1479)
Q Consensus 1468 ~~DrIlVL~~G~ 1479 (1479)
.+|+|+||++|+
T Consensus 537 ~~Dkilvl~~G~ 548 (580)
T COG4618 537 SVDKILVLQDGR 548 (580)
T ss_pred hcceeeeecCCh
Confidence 999999999996
No 86
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=3.8e-58 Score=587.03 Aligned_cols=188 Identities=19% Similarity=0.307 Sum_probs=158.9
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
..++++|++++|+.+ +.+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+++ +.+|
T Consensus 507 ~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 507 PIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred ceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 469999999999643 3589999999999999999999999999999999999999999999875 3579
Q ss_pred EEEcCccccccccHhhhcC-----CCCCCCHHHHHHHHHHcCchH-HHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1346 GIIPQEPVLFEGTVRSNID-----PIGQYSDEEIWKSLERCQLKD-VVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1346 ~iIpQdp~LF~gTIR~NLd-----p~~~~sd~eI~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+|+||++. ...++.+|.. .+...+++++.++|+..++.+ ..... ...||||||||++||||+
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~~~~-----------~~~LSgGqkqRvaLAraL 642 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQP-----------MYTLSGGQKSRVAFAKIT 642 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHhcCC-----------ccccCHHHHHHHHHHHHH
Confidence 99999973 2224444421 122456788999999999864 32222 346999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|++|||||||++||..+...+.+.|++. +.|||+|||+++.+.. ||||++|++|+
T Consensus 643 ~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~gtvIivSHd~~~i~~~~drv~~l~~G~ 701 (718)
T PLN03073 643 FKKPHILLLDEPSNHLDLDAVEALIQGLVLF--QGGVLMVSHDEHLISGSVDELWVVSEGK 701 (718)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999998874 3599999999999987 99999999985
No 87
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.1e-55 Score=508.35 Aligned_cols=475 Identities=24% Similarity=0.352 Sum_probs=363.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 377 VAKFVEVFSTHQFNFNSQKLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQI 456 (1479)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi 456 (1479)
++..++.+..|+..| |+-+.+.-.+|+|...++..-......|++.|.+..|++.+++.+......|...+-+
T Consensus 73 ~~RY~ERlvsH~Atf-------rvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~ 145 (573)
T COG4987 73 AARYVERLVSHDATF-------RVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVL 145 (573)
T ss_pred HHHHHHHHhhhHHHH-------HHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHH
Confidence 344455555555554 5677777889999999999888888999999999999999999999888888776655
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHH
Q 000463 457 SVALILL--YNCLGASVITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRIL 534 (1479)
Q Consensus 457 ~lal~lL--~~~lG~s~l~gl~~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~ 534 (1479)
+++..+. |.-++.+.+.++..+++++.+.....+..++..++..+.+..--....+.+.|+.-++++|-++.|.++++
T Consensus 146 ~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~ 225 (573)
T COG4987 146 IAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALE 225 (573)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHH
Confidence 5544443 44555666666665555555566666777777777666676666778899999999999999999988765
Q ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHH-HHHHHHHHHHHHH--HHhcCccC-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 535 SFRESEFGWLT---KFMYSISGNIIVMWS-TPVLISTLTFATA--LLFGVPLD-AGSVFTTTTIFKILQEPIRNFPQSMI 607 (1479)
Q Consensus 535 ~~R~~El~~l~---k~~~~~a~~~~~~~~-~p~~v~~~tF~~~--~l~~~~Lt-~~~vFt~lalf~iL~~pl~~lp~~i~ 607 (1479)
. .|..|.+ |.........++..+ .-.+++...++.. .-.|+ .+ +..+...+..|..+-.-.-..|.++.
T Consensus 226 ~---~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~-~~~~~aa~~ll~~f~~~eaf~~L~~~A~~ 301 (573)
T COG4987 226 A---TEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGA-LAQPGAALALLVIFAALEAFEPLAPGAFQ 301 (573)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCC-cchhHHHHHHHHHHHHHHHHhhhcchhHH
Confidence 4 3444433 222222222222221 2222221212111 11232 33 22222222223222221123337778
Q ss_pred HHHHHHHHHHHHHHHhccccCcccccccccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChH
Q 000463 608 SLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKS 687 (1479)
Q Consensus 608 ~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKS 687 (1479)
.+.|+..|.+|+.+.++.++......+..+. .+..++++|++|+|+++ +.++|+|+||++++||.+||+|++|||||
T Consensus 302 ~lgq~~~Sa~Rl~~i~~q~~e~~~~~~~~~~--~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKS 378 (573)
T COG4987 302 HLGQVIASARRLNDILDQKPEVTFPDEQTAT--TGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKS 378 (573)
T ss_pred HhhHHHHHHHHHhhhccCCcccCCCccccCC--ccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHH
Confidence 8899999999999999876544322111121 22389999999999864 45899999999999999999999999999
Q ss_pred HHHHHHhcCcccCCcEEEECC-------------eEEEEeccCcCCCCcHHHHHhcCCCC-ChhhHHHHHHHhchHHHHH
Q 000463 688 SLLASILGEMHKISGKVKVCG-------------TTAYVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLE 753 (1479)
Q Consensus 688 TLl~~llG~~~~~~G~i~~~g-------------~iayv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~ 753 (1479)
||++.|.|-++|++|+|.++| .+++++|.+.+|++|+|||+..++|- +.+...++++..+|++-++
T Consensus 379 TllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~ 458 (573)
T COG4987 379 TLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLE 458 (573)
T ss_pred HHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHH
Confidence 999999999999999999998 36899999999999999999999874 3455667899999999999
Q ss_pred hcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccc
Q 000463 754 MMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH 833 (1479)
Q Consensus 754 ~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~ 833 (1479)
..|+|.+|.+||.|..||||||||++|||++.+|+++.||||||.|||+.|++++.+.+.+ ..+|||+|+|||++..++
T Consensus 459 ~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~-~~~~kTll~vTHrL~~le 537 (573)
T COG4987 459 SAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFE-HAEGKTLLMVTHRLRGLE 537 (573)
T ss_pred hChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHH-HhcCCeEEEEecccccHh
Confidence 9999999999999999999999999999999999999999999999999999999976554 457999999999999999
Q ss_pred cCCEEEEEeCCEEEEecChHHHHhcCcchHHHH
Q 000463 834 NVDLILVMREGMIVQSGRYNALLNSGMDFGALV 866 (1479)
Q Consensus 834 ~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~ 866 (1479)
.+|+|++|++|+++++|+|.+++.+++.|.++.
T Consensus 538 ~~drIivl~~Gkiie~G~~~~Ll~~~g~~~~l~ 570 (573)
T COG4987 538 RMDRIIVLDNGKIIEEGTHAELLANNGRYKRLY 570 (573)
T ss_pred hcCEEEEEECCeeeecCCHHhhhccccHHHHHh
Confidence 999999999999999999999999888887764
No 88
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.4e-55 Score=511.81 Aligned_cols=517 Identities=24% Similarity=0.300 Sum_probs=402.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCC-C--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 000463 341 LCVMYVGPVLIQRFVDFTSGKSS-S--FYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITSLYRKGLRLSC 417 (1479)
Q Consensus 341 ~~~~~~~P~ll~~li~~~~~~~~-~--~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR~~L~~~Iy~K~L~ls~ 417 (1479)
-.+....|++++..++-+++-+. + .......+.+++++.+..+++.-.-.+....+..++--.....+|+..+.++.
T Consensus 43 K~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~ 122 (591)
T KOG0057|consen 43 KILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDL 122 (591)
T ss_pred hHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 45556679999999998863222 2 11234455666677777777766666666677777666777889999999999
Q ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 000463 418 SARQAHGVGQIVNYMAVDAQQLSDMMLQ-LHAVWLMPLQISVALILLYNCLGASVITTVVG-IIGVMIFVVMGTKRNNRF 495 (1479)
Q Consensus 418 ~~~~~~~~G~ivnlms~D~~ri~~~~~~-~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~-~il~~~~~~~~~~~~~~~ 495 (1479)
+...+..+|++.+.|.--...|.+++.. +..+.-..+++.+....+|...|++..+-..+ +..-..+...++++-.++
T Consensus 123 ~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~f 202 (591)
T KOG0057|consen 123 SFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRF 202 (591)
T ss_pred HhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHH
Confidence 9888889999999999888888887653 33444455677777778999999765443333 333334455678888899
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Q 000463 496 QFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILS-FRESEFGWLTKFMYSISGNI---IVMWSTPVLISTLTFA 571 (1479)
Q Consensus 496 q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~-~R~~El~~l~k~~~~~a~~~---~~~~~~p~~v~~~tF~ 571 (1479)
++++.++.|+-.+..-+.|.|-.+||.|+-|+.-.++... +++.|-..++....+...+. .+|. +| ++.++..+
T Consensus 203 R~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFs-v~-~~~im~l~ 280 (591)
T KOG0057|consen 203 RKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFS-VA-LTFIMVLG 280 (591)
T ss_pred HHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHH-HH-HHHHHHHH
Confidence 9999999999999999999999999999999988877744 34444443333332222221 1111 11 11111122
Q ss_pred HHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccccCCCCCccEEEEeeE
Q 000463 572 TALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEVRDGV 651 (1479)
Q Consensus 572 ~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~ 651 (1479)
..-...+.+|.+...-.-+++..|+.|++.|...+..+.|+..-.+-....+..++...+. ..|....+..|+++|++
T Consensus 281 ~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~--~~~i~~~~~~I~F~dV~ 358 (591)
T KOG0057|consen 281 SNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQEA--ALPIELFGGSIEFDDVH 358 (591)
T ss_pred hhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhhc--cCCcccCCCcEEEEeeE
Confidence 2223455799999999999999999999999999999999888777665544433221111 11222244579999999
Q ss_pred EEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------EEEEeccCc
Q 000463 652 FSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------TAYVAQTSW 718 (1479)
Q Consensus 652 f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------iayv~Q~~~ 718 (1479)
|+|++ ++++|+++||+|++||.|||+|+|||||||++++|+++.+ .+|+|.++|. ||||||+..
T Consensus 359 f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~ 435 (591)
T KOG0057|consen 359 FSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSV 435 (591)
T ss_pred EEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCccc
Confidence 99973 4569999999999999999999999999999999999999 9999999993 899999999
Q ss_pred CCCCcHHHHHhcCCCCChhhHHHHHHHh---chHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeC
Q 000463 719 IQNGTIEENILFGLPMNRAKYGEVVRVC---CLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDD 795 (1479)
Q Consensus 719 i~~~Tv~enI~fg~~~~~~~~~~v~~~~---~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDe 795 (1479)
+||.||.+||.+|.+.- .++++.++| ++.+-+..+|+|.+|.+||+|..|||||||||+||||+.+||+|+++||
T Consensus 436 LFndTIl~NI~YGn~sa--s~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DE 513 (591)
T KOG0057|consen 436 LFNDTILYNIKYGNPSA--SDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDE 513 (591)
T ss_pred ccchhHHHHhhcCCCCc--CHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecC
Confidence 99999999999998742 234455554 6778899999999999999999999999999999999999999999999
Q ss_pred ccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHH
Q 000463 796 VFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVA 867 (1479)
Q Consensus 796 p~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~ 867 (1479)
|||+||.++.+.+++.+.. ...|||+|+|-|+++.++.+|+|+++++|++.+.|+++|++..++.|.++..
T Consensus 514 aTS~LD~~TE~~i~~~i~~-~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~ 584 (591)
T KOG0057|consen 514 ATSALDSETEREILDMIMD-VMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWT 584 (591)
T ss_pred cccccchhhHHHHHHHHHH-hcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhc
Confidence 9999999999999976554 6789999999999999999999999999999999999999997777777654
No 89
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=6.3e-57 Score=551.27 Aligned_cols=469 Identities=24% Similarity=0.372 Sum_probs=333.0
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--eEEEEeccCcCCC
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--TTAYVAQTSWIQN 721 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~iayv~Q~~~i~~ 721 (1479)
.|+++|++++|+ ++++|+|+||++.+|+.+||||+||+||||||++|.|+..|++|+|...+ +++|++|++....
T Consensus 3 ~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~~ 79 (530)
T COG0488 3 MITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLDP 79 (530)
T ss_pred eEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcCC
Confidence 588999999994 46899999999999999999999999999999999999999999999987 7999999988874
Q ss_pred -CcHHHHHhcCCCCCh---hhHHHHHHH-------------------------hchHHHHHhcccCCccccccCCCccch
Q 000463 722 -GTIEENILFGLPMNR---AKYGEVVRV-------------------------CCLEKDLEMMEYGDQTEIGERGINLSG 772 (1479)
Q Consensus 722 -~Tv~enI~fg~~~~~---~~~~~v~~~-------------------------~~l~~dl~~l~~gd~t~ig~~g~~LSG 772 (1479)
.||.|.++.|...-. ..|++.... ......+..+ |.... .....+|||
T Consensus 80 ~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~~-~~~~~~LSG 156 (530)
T COG0488 80 EKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPDE-DRPVSSLSG 156 (530)
T ss_pred CccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCcc-cCchhhcCH
Confidence 599999998753110 111111100 0011112222 22222 456679999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEE-Eec
Q 000463 773 GQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIV-QSG 850 (1479)
Q Consensus 773 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~-~~g 850 (1479)
|||.||+|||||..+||++||||||++||..+...+-+. +. ..+| |+|+||||.+||.. |++|+.++.|++. +.|
T Consensus 157 G~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~-L~-~~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~G 233 (530)
T COG0488 157 GWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDY-LK-RYPG-TVIVVSHDRYFLDNVATHILELDRGKLTPYKG 233 (530)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHH-HH-hCCC-cEEEEeCCHHHHHHHhhheEEecCCceeEecC
Confidence 999999999999999999999999999999998877433 33 2356 99999999999987 7999999999874 678
Q ss_pred ChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHHHhc
Q 000463 851 RYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERET 930 (1479)
Q Consensus 851 ~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~ 930 (1479)
+|+.+.+.. ....+... .. .+...+..+.+
T Consensus 234 ny~~~~~~r----------~~~~~~~~------------------------~~------------~~~~~~~~~~~---- 263 (530)
T COG0488 234 NYSSYLEQK----------AERLRQEA------------------------AA------------YEKQQKELAKE---- 263 (530)
T ss_pred CHHHHHHHH----------HHHHHHHH------------------------HH------------HHHHHHHHHHH----
Confidence 887665421 11000000 00 00000000000
Q ss_pred CcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 000463 931 GKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYF 1010 (1479)
Q Consensus 931 g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~ 1010 (1479)
..++.
T Consensus 264 --------~~~i~------------------------------------------------------------------- 268 (530)
T COG0488 264 --------QEWIR------------------------------------------------------------------- 268 (530)
T ss_pred --------HHHHH-------------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000463 1011 VTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTI 1090 (1479)
Q Consensus 1011 ~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 1090 (1479)
|+.+
T Consensus 269 --------------------------------------r~~~-------------------------------------- 272 (530)
T COG0488 269 --------------------------------------RGKA-------------------------------------- 272 (530)
T ss_pred --------------------------------------HHHh--------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHh
Q 000463 1091 FLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSN 1170 (1479)
Q Consensus 1091 ~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~ 1170 (1479)
...++++
T Consensus 273 ----------------~~~~~k~--------------------------------------------------------- 279 (530)
T COG0488 273 ----------------AASKAKK--------------------------------------------------------- 279 (530)
T ss_pred ----------------ccchHHH---------------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHh--hcCccc
Q 000463 1171 EWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQF--TEIPSE 1248 (1479)
Q Consensus 1171 ~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~--~~~~~E 1248 (1479)
.+..+...+++.+- ...|.+
T Consensus 280 ----------------------------------------------------------a~sr~k~l~k~~~~~~~~~~~~ 301 (530)
T COG0488 280 ----------------------------------------------------------AKSRIKRLEKLEARLAEERPVE 301 (530)
T ss_pred ----------------------------------------------------------HHHHHHHHHHHHhhhhhccccc
Confidence 00001111111110 000110
Q ss_pred hhccccCCCCCCC-CCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEE
Q 000463 1249 AAWKMEDRLPPPN-WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRII 1327 (1479)
Q Consensus 1249 ~~~~~~~~~~~~~-wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~ 1327 (1479)
......-..+++. -..+-.++++|+++.|.++ .++++++||.|++|++||||||||+|||||+++|.|-..|.+|+|.
T Consensus 302 ~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~ 380 (530)
T COG0488 302 EGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVK 380 (530)
T ss_pred ccccceeeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEE
Confidence 0000000011111 1223468999999999765 5699999999999999999999999999999999999999999999
Q ss_pred EcCEecCCCChhhhhcceEEEcCcc-cccc-ccHhhhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCC
Q 000463 1328 IDGIDISLLGLHDLRSRFGIIPQEP-VLFE-GTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN 1404 (1479)
Q Consensus 1328 IDG~dI~~i~l~~LR~~i~iIpQdp-~LF~-gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1404 (1479)
+.- . -++||.+|+- .++. .|+-+++.... +..+.++...|.+.++...-... +| ..
T Consensus 381 ~g~-~----------v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~~~~------~v----~~ 439 (530)
T COG0488 381 VGE-T----------VKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGEDQEK------PV----GV 439 (530)
T ss_pred eCC-c----------eEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChHHHhC------ch----hh
Confidence 853 1 2699999998 4443 38999986543 44589999999999997654433 33 35
Q ss_pred CCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeC
Q 000463 1405 WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDA 1477 (1479)
Q Consensus 1405 LSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~ 1477 (1479)
||||||-|+.||+.++.+|.+|||||||.+||.+|-..+.++|.+. +.|||+|+|+...+.. |++|+++++
T Consensus 440 LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~ 511 (530)
T COG0488 440 LSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRVATRIWLVED 511 (530)
T ss_pred cCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC
Confidence 9999999999999999999999999999999999999999999874 6799999999999998 999999974
No 90
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1e-55 Score=566.25 Aligned_cols=511 Identities=13% Similarity=0.091 Sum_probs=398.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCC-c----chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 950 GVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFN-P----SLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFS 1024 (1479)
Q Consensus 950 ~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~-~----~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~ 1024 (1479)
.+++.+++.++...+.+..+++.....+.....+.. . ..++.+++++.++..+..++...+......+..+.+|+
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~ 176 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLYS 176 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555566667777778888877665431111111 1 11223333444455556666666677777888888888
Q ss_pred HHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHH
Q 000463 1025 QILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQ-YAWPTIFLVIPLAWANYWY 1103 (1479)
Q Consensus 1025 ~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~ip~~~~~~~~ 1103 (1479)
+.+++....++.|||. ++|++++|+++|++.+...+...+..++..++.+++.+++++. .+|.+.++++...++..++
T Consensus 177 ~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i 255 (659)
T TIGR00954 177 KYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVV 255 (659)
T ss_pred HHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 8998888899999997 8899999999999999999999999999998888887777775 8888877776666666777
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHH
Q 000463 1104 RGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSF 1183 (1479)
Q Consensus 1104 ~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~ 1183 (1479)
.+++.+..+++.+......+.+.+.+.|.++|+.+||+|+.++...+++.+..++..+..........++....+++...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 335 (659)
T TIGR00954 256 LTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKY 335 (659)
T ss_pred HHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 77777777888888888888999999999999999999999999888888877777777666666666666666665432
Q ss_pred HHH-HHHH-H-H-HHhcc----CCcChhH-HHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhc
Q 000463 1184 TFC-LATL-F-M-ILLPS----SIIKPEN-VGLSLSY---GLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1479)
Q Consensus 1184 ~~~-~~~~-~-~-v~~~~----~~~~~g~-vgl~l~y---~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~ 1251 (1479)
... +..+ . . +.... +.++.|. ++..++| ...+..++..+.....++.....+.+|+.++.+.++|...
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~~ 415 (659)
T TIGR00954 336 TWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVKS 415 (659)
T ss_pred HHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 211 1111 1 1 22211 4566554 3434444 4566778888899999999999999999999876544210
Q ss_pred c------ccCCC--------C------CCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHH
Q 000463 1252 K------MEDRL--------P------PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTL 1311 (1479)
Q Consensus 1252 ~------~~~~~--------~------~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTL 1311 (1479)
. .++.. + .......+.|+++||+++|+.+ +++|+|+||+|++||++||+|+||||||||
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGKSTL 494 (659)
T TIGR00954 416 GNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGKSSL 494 (659)
T ss_pred ccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCCHHHH
Confidence 0 00000 0 0001134679999999999744 359999999999999999999999999999
Q ss_pred HHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCC--------CCCCHHHHHHHHHHcCc
Q 000463 1312 IQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI--------GQYSDEEIWKSLERCQL 1383 (1479)
Q Consensus 1312 l~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~--------~~~sd~eI~~aL~~~~L 1383 (1479)
+++|.|+++|++|+|.+|+ |+++++|||+|.+|++|+|+|+... .+.++++++++++++++
T Consensus 495 l~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l 563 (659)
T TIGR00954 495 FRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQL 563 (659)
T ss_pred HHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCC
Confidence 9999999999999999874 6789999999999999999999632 24678999999999999
Q ss_pred hHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccCh
Q 000463 1384 KDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRI 1463 (1479)
Q Consensus 1384 ~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl 1463 (1479)
++++.. |.|+||..+ .+.+||||||||++||||++++|++||||||||+||+++++.+++.+++. ++|+|+||||+
T Consensus 564 ~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~~ 639 (659)
T TIGR00954 564 THILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHRK 639 (659)
T ss_pred HHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCch
Confidence 999877 999999876 56799999999999999999999999999999999999999999999883 89999999999
Q ss_pred hhhhhcCEEEEEeC
Q 000463 1464 PTVMDCDRVIVVDA 1477 (1479)
Q Consensus 1464 ~ti~~~DrIlVL~~ 1477 (1479)
+++..||+|++|+.
T Consensus 640 ~~~~~~d~il~l~~ 653 (659)
T TIGR00954 640 SLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHhCCEEEEEeC
Confidence 99999999999974
No 91
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.8e-54 Score=592.83 Aligned_cols=466 Identities=17% Similarity=0.155 Sum_probs=354.4
Q ss_pred HHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 402 CTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVGIIG 480 (1479)
Q Consensus 402 ~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~il 480 (1479)
..+-..+|++.++.+.....+...|+|+|.++.|++.+.+.+. .+..+....+.++.++++++..-.+.+++.+.++++
T Consensus 1031 ~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i~~~~~ 1110 (1560)
T PTZ00243 1031 RNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALVPCGYL 1110 (1560)
T ss_pred HHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555888999999999888899999999999999999998765 344455555555555554443222222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000463 481 VMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMW- 559 (1479)
Q Consensus 481 ~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~- 559 (1479)
...+..++.+..+..++.....+..-....+|.++|+++||.|++|+.|.++..+.-+...+...+.............
T Consensus 1111 ~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~ 1190 (1560)
T PTZ00243 1111 YYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEF 1190 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223334445555556666667777788999999999999999999998888755444333322111111111111111
Q ss_pred H-HHHHHHHHHHHHHH--HhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcc-cc---
Q 000463 560 S-TPVLISTLTFATAL--LFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVN-ES--- 632 (1479)
Q Consensus 560 ~-~p~~v~~~tF~~~~--l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~-~~--- 632 (1479)
. ....+.++.++++. .....++++.+..++.+...+..|+..+...+..+.++++|++||.+|++..+.++ ..
T Consensus 1191 l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~ 1270 (1560)
T PTZ00243 1191 LSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDE 1270 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccc
Confidence 1 11111112222222 12334788888888888888999999999999999999999999999996322110 00
Q ss_pred --------------------ccc-c-----cCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCCh
Q 000463 633 --------------------VER-V-----EGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGK 686 (1479)
Q Consensus 633 --------------------~~~-~-----~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGK 686 (1479)
.+. . +.....+.|+++|++|+|+++ .+++|+||||+|++||++||||++||||
T Consensus 1271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~vL~~vsf~I~~GekVaIVGrTGSGK 1349 (1560)
T PTZ00243 1271 EVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLVLRGVSFRIAPREKVGIVGRTGSGK 1349 (1560)
T ss_pred cccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCceeecceEEECCCCEEEEECCCCCCH
Confidence 000 0 001123579999999999643 3469999999999999999999999999
Q ss_pred HHHHHHHhcCcccCCcEEEECC-------------eEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHH
Q 000463 687 SSLLASILGEMHKISGKVKVCG-------------TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLE 753 (1479)
Q Consensus 687 STLl~~llG~~~~~~G~i~~~g-------------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~ 753 (1479)
|||+++|+|+++|++|+|.++| .++||||+|.+|++||||||..+..++++...++++.|++.+.++
T Consensus 1350 STLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~l~~~I~ 1429 (1560)
T PTZ00243 1350 STLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVGLRERVA 1429 (1560)
T ss_pred HHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHCCChHHHh
Confidence 9999999999999999999998 379999999999999999998776677788889999999999999
Q ss_pred hcccCCccccccCCCccchHHHHHHHHHHHHhcC-CCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccc
Q 000463 754 MMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD-CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFL 832 (1479)
Q Consensus 754 ~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~-~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l 832 (1479)
.+|.|.+|.+||+|.+||||||||++||||++++ |+|+|||||||+||+++.+.|.+ .++...+++|+|+|+|+++.+
T Consensus 1430 ~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~-~L~~~~~~~TvI~IAHRl~ti 1508 (1560)
T PTZ00243 1430 SESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQA-TVMSAFSAYTVITIAHRLHTV 1508 (1560)
T ss_pred hCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHH-HHHHHCCCCEEEEEeccHHHH
Confidence 9999999999999999999999999999999996 89999999999999999998865 455556789999999999999
Q ss_pred ccCCEEEEEeCCEEEEecChHHHHhc-CcchHHHHHHh
Q 000463 833 HNVDLILVMREGMIVQSGRYNALLNS-GMDFGALVAAH 869 (1479)
Q Consensus 833 ~~~D~i~~l~~G~i~~~g~~~~l~~~-~~~f~~l~~~~ 869 (1479)
..||+|++|++|+|++.|+++|++++ ++.|.+++...
T Consensus 1509 ~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1509 AQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred HhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 99999999999999999999999974 78899887654
No 92
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=4.5e-57 Score=568.19 Aligned_cols=184 Identities=23% Similarity=0.345 Sum_probs=159.2
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
-++++|++++|.. ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 5899999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred EEcCcccc-ccccHhhhcCCC-CCC-CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCC
Q 000463 1347 IIPQEPVL-FEGTVRSNIDPI-GQY-SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1479)
Q Consensus 1347 iIpQdp~L-F~gTIR~NLdp~-~~~-sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1423 (1479)
++||++.+ ++.|+++|+... ..+ .+..+.++++..++.+.....+ .+||||||||++|||||+++|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~-----------~~LSGGe~QRvaiAraL~~~p 472 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLLDKNV-----------KDLSGGELQRVAIAACLSRDA 472 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHHhCCc-----------ccCCHHHHHHHHHHHHHhcCC
Confidence 99999875 466999999632 122 2345678888888876543332 358999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeC
Q 000463 1424 RLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDA 1477 (1479)
Q Consensus 1424 ~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~ 1477 (1479)
+||||||||++||.++...+.+.|++..+ ++|+|+|+|+++.+.. ||||++|++
T Consensus 473 ~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~ 529 (590)
T PRK13409 473 DLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG 529 (590)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC
Confidence 99999999999999999999999998743 7899999999999876 999999965
No 93
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=4.4e-54 Score=544.33 Aligned_cols=511 Identities=17% Similarity=0.149 Sum_probs=368.3
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 322 LLR-CFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLI 400 (1479)
Q Consensus 322 l~~-~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~ri 400 (1479)
+++ .+++.++++.++.++..++..+.|.+++.+++...... . ....+.+++++ +..++..-..+...+.+.++
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~--~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 84 (555)
T TIGR01194 11 LLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFLG--Q-GSLFSFGGLCL---LALLFRIGADIFPAYAGMHI 84 (555)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--c-hHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 556 77888888889999999999999999998875321111 0 11111122222 22233333444456788888
Q ss_pred HHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 401 RCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVITTVVGIIG 480 (1479)
Q Consensus 401 R~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~il 480 (1479)
...+...+|+|.++++.....++++|+++|.++.|++.+.+++..+..+....+.+++++++++..-...+++.++++++
T Consensus 85 ~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~ 164 (555)
T TIGR01194 85 IANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAITISAIII 164 (555)
T ss_pred HHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 88999999999999999888888999999999999999998876554544444444444444332211122222222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 481 VMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWED--HFNKRILSFRESEFGWLTKFMYSISGNIIVM 558 (1479)
Q Consensus 481 ~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~--~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~ 558 (1479)
.+.+..+..++.++...+..+..++..+...|.++|++++|.++.|+ ...+++.+.-++-.+.-.+..........+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (555)
T TIGR01194 165 GTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFG 244 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333445556666677777788888899999999999999999854 3333333222211111111111111111111
Q ss_pred HHHHHHHHHHHHHHHHH---hcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccc---
Q 000463 559 WSTPVLISTLTFATALL---FGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNES--- 632 (1479)
Q Consensus 559 ~~~p~~v~~~tF~~~~l---~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~--- 632 (1479)
...+.+ .++.+++ ..+.++.+.+++.+.+...+..|+..+...+..+.++++|++||.++++.++.++..
T Consensus 245 ~~~~~~----~~~~~~~~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~ 320 (555)
T TIGR01194 245 QLLFFL----LIGCALFAAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELEL 320 (555)
T ss_pred HHHHHH----HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Confidence 111111 1111111 124789999999999999999999999999999999999999999998642211000
Q ss_pred cccc-----cCCCCCccEEEEeeEEEecCCC--CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEE
Q 000463 633 VERV-----EGCDDNIAVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVK 705 (1479)
Q Consensus 633 ~~~~-----~~~~~~~~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~ 705 (1479)
.+.. +.......|+++|++|+|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.
T Consensus 321 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~ 400 (555)
T TIGR01194 321 SDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEIL 400 (555)
T ss_pred cccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEE
Confidence 0000 1011235699999999997532 23699999999999999999999999999999999999999999999
Q ss_pred ECCe-------------EEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccch
Q 000463 706 VCGT-------------TAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSG 772 (1479)
Q Consensus 706 ~~g~-------------iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSG 772 (1479)
++|. ++||+|+++++++|+++|+ ....++++.+++++.+++.++++.+|.|++|. .+|||
T Consensus 401 ~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSg 473 (555)
T TIGR01194 401 LDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALST 473 (555)
T ss_pred ECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCH
Confidence 9983 7999999999999999995 22334556667888888999999999999873 78999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhh-cCCcEEEEEccCCcccccCCEEEEEeCCEEEEe
Q 000463 773 GQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGA-LKGKTIILVTHQVDFLHNVDLILVMREGMIVQS 849 (1479)
Q Consensus 773 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~ 849 (1479)
|||||++||||++++|+++|||||||+||+++++++.+.+++.. .+|+|+|+|||+++.+..||+|++|++|++++.
T Consensus 474 Gq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 474 GQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999987766543 468999999999999989999999999999863
No 94
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-56 Score=500.93 Aligned_cols=525 Identities=21% Similarity=0.289 Sum_probs=377.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHH-HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 336 LAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEG-YYLVLILLVAKFV--EVFSTHQFNFNSQKLGMLIRCTLITSLYRKG 412 (1479)
Q Consensus 336 ~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g-~~l~~~l~~~~~~--~~~~~~~~~~~~~~~g~riR~~L~~~Iy~K~ 412 (1479)
+..+.-++....|.+.+.+++-+..+..+.+.- +.++++.|+-... ..+..+.-.|..-++..----.+-..+|++.
T Consensus 223 ll~i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrHl 302 (790)
T KOG0056|consen 223 LLIIGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRHL 302 (790)
T ss_pred HHHHHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHHH
Confidence 333444455566999999998887554443322 2222222221111 1122222222222222222234556788888
Q ss_pred hcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Q 000463 413 LRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQL-HAVWLMPLQISVALILLYNCLGASVITTVVGIIG---VMIFVVMG 488 (1479)
Q Consensus 413 L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~-~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~il---~~~~~~~~ 488 (1479)
+.||-..--++.+||+...|.--...+. +..|+ ..+--..+.+++|+ .|..+-.-...|+++++. ...+...+
T Consensus 303 h~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~--vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~i 379 (790)
T KOG0056|consen 303 HNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAM--VYFFIKFNIWFGLIVFLMMLLYCYVTIKI 379 (790)
T ss_pred HhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhh--hhhhhhHhHHHHHHHHHHHHHHhheeeee
Confidence 8887755445577999988876666555 33332 22222223444444 344444344445444333 23333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 489 TKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDH----FNKRILSFRESEFGWLTKFMYSISGNIIVMWSTPVL 564 (1479)
Q Consensus 489 ~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~----f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~p~~ 564 (1479)
...-.++|+++..+-.+--..-.+.|-|..++|.|+-|+. +.+.|.+.-+.|-+.+....++......++... +
T Consensus 380 TeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lg--l 457 (790)
T KOG0056|consen 380 TEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLG--L 457 (790)
T ss_pred ehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhH--H
Confidence 5555666666544333322344577778999999998865 555566666666666555444443332222111 1
Q ss_pred HHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccccCCCCCcc
Q 000463 565 ISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIA 644 (1479)
Q Consensus 565 v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~ 644 (1479)
....-+.+|....+.+|.+...-.+++.-.|.+|++.+.....++....+-.+|+.+.|++++...+.....|-....+.
T Consensus 458 l~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~~~G~ 537 (790)
T KOG0056|consen 458 LAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKVTQGK 537 (790)
T ss_pred hhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccccCCe
Confidence 12223445555567799999888888899999999999999999999999999999999876532221111222234578
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------EE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------TA 711 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------ia 711 (1479)
|+++|++|+|++ ++|+|+||||++++|+.+|+|||+|+||||+++.+.+.++..+|+|.++|+ ||
T Consensus 538 i~fsnvtF~Y~p--~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IG 615 (790)
T KOG0056|consen 538 IEFSNVTFAYDP--GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIG 615 (790)
T ss_pred EEEEEeEEecCC--CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcC
Confidence 999999999974 579999999999999999999999999999999999999999999999993 89
Q ss_pred EEeccCcCCCCcHHHHHhcCCCC--ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCC
Q 000463 712 YVAQTSWIQNGTIEENILFGLPM--NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1479)
Q Consensus 712 yv~Q~~~i~~~Tv~enI~fg~~~--~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 789 (1479)
.|||+..+||.||..||.+|+|- |++-| ++.+|....+.+-.+|+|..|.+||||-.||||+|||||+||++.++|.
T Consensus 616 VVPQDtvLFNdTI~yNIryak~~Asneevy-aAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~ 694 (790)
T KOG0056|consen 616 VVPQDTVLFNDTILYNIRYAKPSASNEEVY-AAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPS 694 (790)
T ss_pred cccCcceeecceeeeheeecCCCCChHHHH-HHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCc
Confidence 99999999999999999999874 45555 4567778888899999999999999999999999999999999999999
Q ss_pred EEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhc-CcchHHHHHH
Q 000463 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS-GMDFGALVAA 868 (1479)
Q Consensus 790 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~-~~~f~~l~~~ 868 (1479)
|++|||.|||||.++.+.| +.++....+++|.|+|.|+++.+-+||.|++++||+|+|.|+++|++.+ ++.|+++.+.
T Consensus 695 iIlLDEATSALDT~tER~I-QaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~ 773 (790)
T KOG0056|consen 695 IILLDEATSALDTNTERAI-QAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQA 773 (790)
T ss_pred EEEEcchhhhcCCccHHHH-HHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHH
Confidence 9999999999999999998 5677777889999999999999999999999999999999999999987 8889988865
Q ss_pred h
Q 000463 869 H 869 (1479)
Q Consensus 869 ~ 869 (1479)
+
T Consensus 774 q 774 (790)
T KOG0056|consen 774 Q 774 (790)
T ss_pred H
Confidence 4
No 95
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-56 Score=529.06 Aligned_cols=438 Identities=24% Similarity=0.386 Sum_probs=335.1
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1479)
..++++|++++|+ +.++|+||||++.+||++|++|.||+|||||+|.|.|.++|++|+|.++|+
T Consensus 7 ~ll~~~~i~K~Fg---gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~ 83 (500)
T COG1129 7 PLLELRGISKSFG---GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAA 83 (500)
T ss_pred ceeeeecceEEcC---CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhC
Confidence 4689999999996 458999999999999999999999999999999999999999999999994
Q ss_pred -EEEEeccCcC-CCCcHHHHHhcCCCCChh----hHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHH
Q 000463 710 -TAYVAQTSWI-QNGTIEENILFGLPMNRA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1479)
Q Consensus 710 -iayv~Q~~~i-~~~Tv~enI~fg~~~~~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 783 (1479)
|+.|.|+.-+ ++.||.|||.+|.+.... .+++..+. ..+.++.+.... .......+||+||||-|+||||
T Consensus 84 GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~--A~~~l~~lg~~~--~~~~~v~~LsiaqrQ~VeIArA 159 (500)
T COG1129 84 GIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRR--ARELLARLGLDI--DPDTLVGDLSIAQRQMVEIARA 159 (500)
T ss_pred CcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHH--HHHHHHHcCCCC--ChhhhhhhCCHHHHHHHHHHHH
Confidence 7899999765 689999999998764331 11111111 112233332221 1556778999999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecCh-HHHHhcCcc
Q 000463 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRY-NALLNSGMD 861 (1479)
Q Consensus 784 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~-~~l~~~~~~ 861 (1479)
++.+++|+|||||||+|+.+..+++|+.+.+...+|.++|+|||+++++.. ||||.||+||+.+..++. .++-
T Consensus 160 l~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~----- 234 (500)
T COG1129 160 LSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETS----- 234 (500)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCC-----
Confidence 999999999999999999999999998777777789999999999999865 999999999998854321 0000
Q ss_pred hHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHHHhcCcchHHHHHHH
Q 000463 862 FGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIY 941 (1479)
Q Consensus 862 f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y 941 (1479)
. ++++
T Consensus 235 ---------------------------------------~------------------~~lv------------------ 239 (500)
T COG1129 235 ---------------------------------------E------------------DELV------------------ 239 (500)
T ss_pred ---------------------------------------H------------------HHHH------------------
Confidence 0 0000
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 942 CTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQI 1021 (1479)
Q Consensus 942 ~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~ 1021 (1479)
+...
T Consensus 240 -~~Mv--------------------------------------------------------------------------- 243 (500)
T COG1129 240 -RLMV--------------------------------------------------------------------------- 243 (500)
T ss_pred -HHhh---------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000463 1022 FFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANY 1101 (1479)
Q Consensus 1022 l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~ 1101 (1479)
|
T Consensus 244 ----------------------G--------------------------------------------------------- 244 (500)
T COG1129 244 ----------------------G--------------------------------------------------------- 244 (500)
T ss_pred ----------------------C---------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHH
Q 000463 1102 WYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLG 1181 (1479)
Q Consensus 1102 ~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~ 1181 (1479)
|+
T Consensus 245 ----------r~-------------------------------------------------------------------- 246 (500)
T COG1129 245 ----------RE-------------------------------------------------------------------- 246 (500)
T ss_pred ----------cc--------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCC
Q 000463 1182 SFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN 1261 (1479)
Q Consensus 1182 ~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~ 1261 (1479)
..+..++ + +..
T Consensus 247 ------------------------------------------------------------~~~~~~~-~--------~~~ 257 (500)
T COG1129 247 ------------------------------------------------------------LEDLFPE-P--------PEE 257 (500)
T ss_pred ------------------------------------------------------------hhhhccc-c--------ccc
Confidence 0000000 0 000
Q ss_pred CCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChh-h
Q 000463 1262 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH-D 1340 (1479)
Q Consensus 1262 wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~-~ 1340 (1479)
-+..-.++++|++..- .++|+||++++||.+||.|--|||+|-++++|||.-++.+|+|.+||.++.--+++ .
T Consensus 258 ~~~~~~l~v~~l~~~~------~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~A 331 (500)
T COG1129 258 GIGEPVLEVRNLSGGG------KVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRDA 331 (500)
T ss_pred CCCCcEEEEecCCCCC------ceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHHH
Confidence 0112245677766532 58999999999999999999999999999999999999999999999988877766 5
Q ss_pred hhcceEEEcCccc---cc-cccHhhhcCCC--CCCCHH-HHHHHHHHcCchHHHHhCc---CCccccccCCCCCCCchHH
Q 000463 1341 LRSRFGIIPQEPV---LF-EGTVRSNIDPI--GQYSDE-EIWKSLERCQLKDVVAAKP---DKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1341 LR~~i~iIpQdp~---LF-~gTIR~NLdp~--~~~sd~-eI~~aL~~~~L~~~i~~lp---~gLdt~v~e~G~nLSgGQr 1410 (1479)
.+..|+|||-|-- +| .-+|++|+... ..++.. -+...-++.-..+++..+. .+.+.+++ +||||.+
T Consensus 332 i~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v~----~LSGGNQ 407 (500)
T COG1129 332 IKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPIG----TLSGGNQ 407 (500)
T ss_pred HHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchhh----cCCchhh
Confidence 7888999998863 44 55999999632 111100 1223333333444555442 34445554 7999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|+++|||+|..+|+||||||||.++|..+.+.|.+.|++.. +|.+||+|+-.++++.. ||||+||.+|+
T Consensus 408 QKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gr 478 (500)
T COG1129 408 QKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGR 478 (500)
T ss_pred hhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999876 57999999999999985 99999999996
No 96
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3.5e-52 Score=572.33 Aligned_cols=472 Identities=17% Similarity=0.184 Sum_probs=357.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 394 QKLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVI 472 (1479)
Q Consensus 394 ~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l 472 (1479)
.+.+.+.-..+...++++.++.+.........|+|+|.++.|++.+.+.+. .+..+....+.+++++++++..-++.++
T Consensus 950 ~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l 1029 (1490)
T TIGR01271 950 VHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFI 1029 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666667777888999999999888889999999999999999998664 4445555555555555555443333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 473 TTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSIS 552 (1479)
Q Consensus 473 ~gl~~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a 552 (1479)
+.++++++...+..+..+..+..++.....+.......+|.++|+.+||.|+||+.|.++..+.-+...+..........
T Consensus 1030 ~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1109 (1490)
T TIGR01271 1030 AAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLR 1109 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333333333444445555666666677778888999999999999999999999988876654432211111111111
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccc
Q 000463 553 GNIIVMWS-TPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNE 631 (1479)
Q Consensus 553 ~~~~~~~~-~p~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~ 631 (1479)
...+.... .-.++..+.+.. +.....+++.+-.++++...+..++..+...+..+..+.+|.+||.+|++.++..+.
T Consensus 1110 wl~~~~~~i~~~~~~~~~~l~--~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~ 1187 (1490)
T TIGR01271 1110 WFQMRIDIIFVFFFIAVTFIA--IGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPR 1187 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 11100000 001111111111 111234556666666667777888888888899999999999999999976433211
Q ss_pred ccc--------------c--ccC-CCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHh
Q 000463 632 SVE--------------R--VEG-CDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASIL 694 (1479)
Q Consensus 632 ~~~--------------~--~~~-~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ll 694 (1479)
..+ . .+. -+..+.|+++|++|+|+++ .+++|+|+||+|++||++||||++|||||||+++|+
T Consensus 1188 ~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~ 1266 (1490)
T TIGR01271 1188 PSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALL 1266 (1490)
T ss_pred ccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHh
Confidence 000 0 000 0123579999999999753 468999999999999999999999999999999999
Q ss_pred cCcccCCcEEEECC-------------eEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcc
Q 000463 695 GEMHKISGKVKVCG-------------TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQT 761 (1479)
Q Consensus 695 G~~~~~~G~i~~~g-------------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t 761 (1479)
|+++ .+|+|.++| +++|+||+|.+|++||||||....+++++...++++.|++.+.++.+|.|.+|
T Consensus 1267 rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLdt 1345 (1490)
T TIGR01271 1267 RLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLDF 1345 (1490)
T ss_pred hhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCcccccc
Confidence 9997 899999998 38999999999999999999766667778888999999999999999999999
Q ss_pred ccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEE
Q 000463 762 EIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVM 841 (1479)
Q Consensus 762 ~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l 841 (1479)
.+||+|.+||||||||++||||++++|+|+|||||||+||+++.+.|.+. ++...+++|+|+|||+++.+..+|+|++|
T Consensus 1346 ~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~-L~~~~~~~TvI~IaHRl~ti~~~DrIlvL 1424 (1490)
T TIGR01271 1346 VLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKT-LKQSFSNCTVILSEHRVEALLECQQFLVI 1424 (1490)
T ss_pred ccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHH-HHHHcCCCEEEEEecCHHHHHhCCEEEEE
Confidence 99999999999999999999999999999999999999999999888755 44556789999999999999999999999
Q ss_pred eCCEEEEecChHHHHhcCcchHHHHHHhh
Q 000463 842 REGMIVQSGRYNALLNSGMDFGALVAAHE 870 (1479)
Q Consensus 842 ~~G~i~~~g~~~~l~~~~~~f~~l~~~~~ 870 (1479)
++|+|++.|+++++++.++.|.++++..+
T Consensus 1425 ~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1425 EGSSVKQYDSIQKLLNETSLFKQAMSAAD 1453 (1490)
T ss_pred ECCEEEEeCCHHHHHcCCcHHHHHHHHhC
Confidence 99999999999999988888998876544
No 97
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.5e-52 Score=483.28 Aligned_cols=527 Identities=20% Similarity=0.237 Sum_probs=421.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 317 PVRTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTS-GKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQK 395 (1479)
Q Consensus 317 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~ 395 (1479)
....+....+++.|+..+++..+-.++..+.|+.+-+.-|=+- +.+.+ .-..+.++....++++.+++.--.+...|
T Consensus 12 ~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~--TLv~Ltvlal~ly~~~glLd~iR~~~l~R 89 (580)
T COG4618 12 NLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVP--TLVMLTVLALGLYAFQGLLDAIRSRVLVR 89 (580)
T ss_pred chhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666677888888888888888899999988776666443 22222 23455666667777888888888888999
Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 396 LGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-----QLHAVWLMPLQISVALILLYNCLGAS 470 (1479)
Q Consensus 396 ~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~-----~~~~~w~~plqi~lal~lL~~~lG~s 470 (1479)
+|.++-..|..-||.-+++.....+......+.+ .|.+.+..|+. -+.+.--+|+-+.++ |++.-.+|+-
T Consensus 90 ig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~-fl~Hp~lG~~ 164 (580)
T COG4618 90 IGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAVI-FLFHPWLGLI 164 (580)
T ss_pred HHHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHHH-HHHHHHHHHH
Confidence 9999999999999999975554443322233443 37777777664 233443358755554 4666689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 471 VITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYS 550 (1479)
Q Consensus 471 ~l~gl~~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~ 550 (1479)
+++|.++++++..+|-..+++- -++-.+..-+|....+-.++|..+|+.+|..+...++-.+...+-+++..+....
T Consensus 165 a~~ga~iLv~la~ln~~~t~~p---~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~ 241 (580)
T COG4618 165 ALAGAIILVVLALLNERATRKP---LKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDR 241 (580)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9999999998888887766543 3444566777888899999999999999999998888888777777766665544
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 000463 551 ISGNIIVMWSTPVLI--STLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSREL 628 (1479)
Q Consensus 551 ~a~~~~~~~~~p~~v--~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~ 628 (1479)
......+.-..-.+. .+...+.|..+++++|++.++..--+..-.-.|+........++..++.|.+|++++|.....
T Consensus 242 ~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~ 321 (580)
T COG4618 242 NGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPA 321 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 433332222222222 334566677778899999999887777777789999999999999999999999999986543
Q ss_pred cccccccccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC
Q 000463 629 VNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG 708 (1479)
Q Consensus 629 ~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g 708 (1479)
... +.+.+..+..+.++++++.-+ ..++|+|+||||++++||-++|+||+|||||||.++|.|..+|++|.|+++|
T Consensus 322 ~~~---~m~LP~P~g~L~Ve~l~~~PP-g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDg 397 (580)
T COG4618 322 AAE---RMPLPAPQGALSVERLTAAPP-GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDG 397 (580)
T ss_pred ccC---CCCCCCCCceeeEeeeeecCC-CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecc
Confidence 332 233344567899999999765 4467999999999999999999999999999999999999999999999998
Q ss_pred -------------eEEEEeccCcCCCCcHHHHHh-cCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHH
Q 000463 709 -------------TTAYVAQTSWIQNGTIEENIL-FGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQ 774 (1479)
Q Consensus 709 -------------~iayv~Q~~~i~~~Tv~enI~-fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 774 (1479)
+|||.||+-.+|.|||.|||. |+.+.|.++.-+..+..+.++-+-.+|+|++|.||+.|.+|||||
T Consensus 398 a~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQ 477 (580)
T COG4618 398 ADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQ 477 (580)
T ss_pred hhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchH
Confidence 599999999999999999996 665666665555556666777788999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHH
Q 000463 775 KQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNA 854 (1479)
Q Consensus 775 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~ 854 (1479)
||||+||||+|.||.+++||||-|+||.+....+.+.+.....+|.|+|+|||+++.+..+|+|++|+||++...|+.+|
T Consensus 478 RQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~e 557 (580)
T COG4618 478 RQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREE 557 (580)
T ss_pred HHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHH
Confidence 99999999999999999999999999999999998777677778999999999999999999999999999999999998
Q ss_pred HHh
Q 000463 855 LLN 857 (1479)
Q Consensus 855 l~~ 857 (1479)
+++
T Consensus 558 VLa 560 (580)
T COG4618 558 VLA 560 (580)
T ss_pred HHH
Confidence 875
No 98
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=3.2e-52 Score=527.39 Aligned_cols=501 Identities=17% Similarity=0.185 Sum_probs=353.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 318 VRTTLLRCFWKEVAFTAFLAIVRLCVMYVG-PVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKL 396 (1479)
Q Consensus 318 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~-P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 396 (1479)
+++.+++.+++.++...++.++..++..+. |++.+.+++.+.+ . ...-+.+++.+++..+ +.....+...++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~-~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 75 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADT-S--LLVLPEFLGLLLLLMA----VTLGSQLALTTL 75 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-c--chHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 566778888888888888888888888774 6777888876532 1 1111111111111111 112233344566
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 397 GMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVITTVV 476 (1479)
Q Consensus 397 g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~ 476 (1479)
+.++...+...+|+|.++++.....++.+|+++|.++.|++.+..++..+..++...+.+++++++++..-+..+++.++
T Consensus 76 ~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~ 155 (547)
T PRK10522 76 GHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAI 155 (547)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 67777778889999999999988888999999999999999999876666677777777777776665433334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc--h----HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 477 GIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQA--W----EDHFNKRILSFRESEFGWLTKFMYS 550 (1479)
Q Consensus 477 ~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~--w----E~~f~~~I~~~R~~El~~l~k~~~~ 550 (1479)
++++.+.+...+.++.++..++.++..+++.+.++|.++|++++++.+ . ++.|.+...+.++...+..+ .
T Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 231 (547)
T PRK10522 156 WMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADT----F 231 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHH----H
Confidence 444455566677788888888899999999999999999999998533 2 33343433333333332211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC---ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000463 551 ISGNIIVMWSTPVLISTLTFATALLFGV---PLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRE 627 (1479)
Q Consensus 551 ~a~~~~~~~~~p~~v~~~tF~~~~l~~~---~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e 627 (1479)
........ .++..+.++.+.+.++ ..+.+.+.....+...+..|+..+...+..+.+++++.+||.+++..++
T Consensus 232 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~ 307 (547)
T PRK10522 232 HLSAVNWS----NIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPY 307 (547)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 11111110 1111111222222221 1122222222222233668999999999999999999999999986543
Q ss_pred CcccccccccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEEC
Q 000463 628 LVNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVC 707 (1479)
Q Consensus 628 ~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~ 707 (1479)
.++.. +..+. +....++++|++|+|++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++
T Consensus 308 ~~~~~-~~~~~-~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~ 383 (547)
T PRK10522 308 KAEFP-RPQAF-PDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLD 383 (547)
T ss_pred ccccc-ccccc-CcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEC
Confidence 22111 11111 11246999999999973 3469999999999999999999999999999999999999999999998
Q ss_pred C-------------eEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccc---CCCccc
Q 000463 708 G-------------TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGE---RGINLS 771 (1479)
Q Consensus 708 g-------------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~---~g~~LS 771 (1479)
| .++|++|+|.++++|++|| +...+++..++.++.+++..++ ..++ +|.+||
T Consensus 384 g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~G~~LS 451 (547)
T PRK10522 384 GKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKL---------ELEDGRISNLKLS 451 (547)
T ss_pred CEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhh---------hccccCCCCCCCC
Confidence 7 3799999999999999999 3333444444444444444333 2333 378999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccccCCEEEEEeCCEEEEe
Q 000463 772 GGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREGMIVQS 849 (1479)
Q Consensus 772 GGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~ 849 (1479)
||||||++||||++++|+++|||||||+||+++++.+.+.+.+... +++|+|+|||+++.+..||+|++|++|++++.
T Consensus 452 gGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 452 KGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999877654433 58999999999999999999999999999875
No 99
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.5e-53 Score=492.47 Aligned_cols=441 Identities=24% Similarity=0.421 Sum_probs=339.3
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1479)
..++++++++.|+ +..+++||||++++||++|++|+||+|||||+++|.|.++|++|+|.++|+
T Consensus 3 ~~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~ 79 (501)
T COG3845 3 PALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRL 79 (501)
T ss_pred ceEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHc
Confidence 4789999999996 467999999999999999999999999999999999999999999999995
Q ss_pred -EEEEeccCcC-CCCcHHHHHhcCCCCChh---hHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 710 -TAYVAQTSWI-QNGTIEENILFGLPMNRA---KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 710 -iayv~Q~~~i-~~~Tv~enI~fg~~~~~~---~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
||+|.|++-+ .+.||.|||..|.+.... .+.++.+ .+.+-.+ ..|..-...++..+||-||||||.|-+||
T Consensus 80 GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~--~i~~l~~--~yGl~vdp~~~V~dLsVG~qQRVEIlKaL 155 (501)
T COG3845 80 GIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARA--RIKELSE--RYGLPVDPDAKVADLSVGEQQRVEILKAL 155 (501)
T ss_pred CCcEEeeccccccccchhhhhhhcCccccccccCHHHHHH--HHHHHHH--HhCCCCCccceeecCCcchhHHHHHHHHH
Confidence 7999999876 578999999999864210 1111111 1111111 22334445577889999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhcCcchH
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGMDFG 863 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f~ 863 (1479)
|++|+++|||||||.|-|...+++|+.+.+....|+|||+|||.++++.. ||++.||++|+++. +++..
T Consensus 156 yr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvg--t~~~~-------- 225 (501)
T COG3845 156 YRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVG--TVDPV-------- 225 (501)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEe--eecCC--------
Confidence 99999999999999999999999998887777889999999999999876 99999999999763 21100
Q ss_pred HHHHHhhhhhhhhhccccCCCCCCCCCCCCCccccccccccCCCcccccccccCCCchhhhHHHHhcCcchHHHHHHHHH
Q 000463 864 ALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCT 943 (1479)
Q Consensus 864 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~ 943 (1479)
.+. ..+|-
T Consensus 226 ---------------------------~~~-----------------------------t~~el---------------- 233 (501)
T COG3845 226 ---------------------------AET-----------------------------TEEEL---------------- 233 (501)
T ss_pred ---------------------------CCC-----------------------------CHHHH----------------
Confidence 000 00000
Q ss_pred HhhhhHHHHHHHHHHHHHHHHhhhhhhhcccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 944 EAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFF 1023 (1479)
Q Consensus 944 ~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~ 1023 (1479)
+
T Consensus 234 -a------------------------------------------------------------------------------ 234 (501)
T COG3845 234 -A------------------------------------------------------------------------------ 234 (501)
T ss_pred -H------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000463 1024 SQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWY 1103 (1479)
Q Consensus 1024 ~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~ 1103 (1479)
T Consensus 235 -------------------------------------------------------------------------------- 234 (501)
T COG3845 235 -------------------------------------------------------------------------------- 234 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHH
Q 000463 1104 RGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSF 1183 (1479)
Q Consensus 1104 ~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~ 1183 (1479)
++
T Consensus 235 ------------~l------------------------------------------------------------------ 236 (501)
T COG3845 235 ------------EL------------------------------------------------------------------ 236 (501)
T ss_pred ------------HH------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHhccCCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCC
Q 000463 1184 TFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWP 1263 (1479)
Q Consensus 1184 ~~~~~~~~~v~~~~~~~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp 1263 (1479)
+ +... +. .+. + .++.-|
T Consensus 237 --------M--vG~~-v~-------------------------------------------~~~------~---~~~~~p 253 (501)
T COG3845 237 --------M--VGRE-VV-------------------------------------------LRV------V---KPPSTP 253 (501)
T ss_pred --------h--cCCc-cc-------------------------------------------ccc------c---cCCCCC
Confidence 0 0000 00 000 0 011123
Q ss_pred CCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEec-CCCChhhhh
Q 000463 1264 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDI-SLLGLHDLR 1342 (1479)
Q Consensus 1264 ~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI-~~i~l~~LR 1342 (1479)
..--++++|+++.-+.+ -..+++|||++++||.+||.|-.|.|-+.|+.+|.|+..|.+|+|.++|.|+ ...+....|
T Consensus 254 g~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r 332 (501)
T COG3845 254 GEVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRERR 332 (501)
T ss_pred CCeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHHH
Confidence 34468999999986544 3479999999999999999999999999999999999999999999999997 677888876
Q ss_pred c-ceEEEcCccc----cccccHhhhcCCCCC----------CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCc
Q 000463 1343 S-RFGIIPQEPV----LFEGTVRSNIDPIGQ----------YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSV 1407 (1479)
Q Consensus 1343 ~-~i~iIpQdp~----LF~gTIR~NLdp~~~----------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1407 (1479)
+ .+++||.|.+ ..+-|+.||+-+... .+-.++.+..++. +.+| .-.+.+.++++ .+|||
T Consensus 333 ~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~l-i~~f-dVr~~~~~~~a----~~LSG 406 (501)
T COG3845 333 RLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFAREL-IEEF-DVRAPSPDAPA----RSLSG 406 (501)
T ss_pred hcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHH-HHHc-CccCCCCCcch----hhcCC
Confidence 5 5999999984 567799999853211 1224444333221 1111 11133444444 47999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1408 GQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1408 GQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|+.|++-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. +|+.|++|+-+|+.+.. ||||.||.+|+
T Consensus 407 GNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gr 480 (501)
T COG3845 407 GNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGR 480 (501)
T ss_pred cceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCc
Confidence 99999999999999999999999999999999999999888875 68899999999999988 99999999996
No 100
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-50 Score=525.30 Aligned_cols=497 Identities=19% Similarity=0.231 Sum_probs=362.4
Q ss_pred hhhhhhhcccccccCCCC---CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeccc
Q 000463 965 LMAGDYWLSYETSEDHSM---SFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTT 1041 (1479)
Q Consensus 965 ~~~~~~wl~~~~~~~~~~---~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~ 1041 (1479)
...++..+....+....+ ......|.....+..++..++.--..+.....|.+.-..+-..++++.+|..-.--...
T Consensus 217 ~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~~ 296 (1381)
T KOG0054|consen 217 GFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAIYRKALRLSNSARGET 296 (1381)
T ss_pred ccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHhhhcCchhhccCC
Confidence 555666665443321111 11112233333333344444444444555677888888888889999999988877788
Q ss_pred CchhhHHHHhchhhHhhhhhHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 1042 PSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITC-QYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSI 1120 (1479)
Q Consensus 1042 ~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~ 1120 (1479)
+.|+|+|-++.|.+.+++.....-...... ++++..+.++. ...|.. ++.+.++++++-++.+..+..+..++....
T Consensus 297 t~G~ivNlms~D~~ri~~~~~~~h~~w~~P-lqi~~~l~lLy~~LG~sa-~~G~~~~il~~p~n~~~a~~~~~~q~~~m~ 374 (1381)
T KOG0054|consen 297 TVGEIVNLMSVDAQRLSDAACFLHLLWSAP-LQIILALYLLYGLLGPSA-LAGVAVMVLLIPLNSFLAKKIAKFQKRLMK 374 (1381)
T ss_pred CcchhhhhhhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhChHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999998776543333322 23222222221 222221 122222233333333333333344444444
Q ss_pred hhhhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 000463 1121 TKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSII 1200 (1479)
Q Consensus 1121 ~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~ 1200 (1479)
.+..-....+|.++|+++||.|+||+.|.++..+..++..+.............+.......++.+++....+....+.+
T Consensus 375 ~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~tF~~~v~~~~~~l 454 (1381)
T KOG0054|consen 375 RKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVVTFVVFVLLLGNLL 454 (1381)
T ss_pred hhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccc
Confidence 45555667899999999999999999999887776665554443333333333322222222222222222221335567
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCC
Q 000463 1201 KPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSN 1280 (1479)
Q Consensus 1201 ~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~ 1280 (1479)
+|..+-.++++.-.+..++..+-.....+-+..+|++|+++|+..++..+...+. .+.-+.+-.|+++|.+|+..++
T Consensus 455 t~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~---~~~~~~~~~i~i~~~sfsW~~~ 531 (1381)
T KOG0054|consen 455 TASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVER---SPDEAGENAIEIKNGSFSWDSE 531 (1381)
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCcccccc---CCCCCCCceEEEeeeeEecCCC
Confidence 7777777778777777788777777888888899999999999766543322211 1222344579999999999763
Q ss_pred -CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccH
Q 000463 1281 -TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTV 1359 (1479)
Q Consensus 1281 -~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTI 1359 (1479)
.++.|+||||+|++||.+||||++|||||||+++|+|-.+..+|++.++|. ++|+||.|-+|+|||
T Consensus 532 ~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gs-------------iaYv~Q~pWI~ngTv 598 (1381)
T KOG0054|consen 532 SPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGS-------------VAYVPQQPWIQNGTV 598 (1381)
T ss_pred CCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCe-------------EEEeccccHhhCCcH
Confidence 445999999999999999999999999999999999999999999999984 999999999999999
Q ss_pred hhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHh
Q 000463 1360 RSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQT 1439 (1479)
Q Consensus 1360 R~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~T 1439 (1479)
||||-...+++++.-.++++.|+|++.++.+|.|=.|.|||+|.||||||||||+||||++++++|.+||.|-|+||.++
T Consensus 599 reNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahv 678 (1381)
T KOG0054|consen 599 RENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHV 678 (1381)
T ss_pred HHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhh
Confidence 99998888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH-HHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1440 DAEI-QRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1440 e~~I-q~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
.+.| .+.|+...+++|+|.+||.++.+.+||+|+||++|+
T Consensus 679 g~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~ 719 (1381)
T KOG0054|consen 679 GKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGK 719 (1381)
T ss_pred hHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCe
Confidence 8776 677877889999999999999999999999999996
No 101
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=4.8e-49 Score=504.83 Aligned_cols=504 Identities=15% Similarity=0.162 Sum_probs=368.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 329 EVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYY-LVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITS 407 (1479)
Q Consensus 329 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~-l~~~l~~~~~~~~~~~~~~~~~~~~~g~riR~~L~~~ 407 (1479)
.++...++.++.+.+....|++++.+++.+.+.+. ..+. +...+++..++.+++..-..|...++..++|.-+...
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~---~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ 173 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSP---RNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRY 173 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46667778888899999999999999998765432 1111 0111222223333344444455667777788888877
Q ss_pred HHHHHhcCCh----hhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 000463 408 LYRKGLRLSC----SARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVIT-TVVGIIGV 481 (1479)
Q Consensus 408 Iy~K~L~ls~----~~~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~-gl~~~il~ 481 (1479)
++++.+.--. ...++ .+|++.+.++.|++.+.+.+. .+..+...++.++.+++.|+..+++.... .++.+++.
T Consensus 174 l~~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~ 252 (659)
T TIGR00954 174 LYSKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFAT 252 (659)
T ss_pred HHHHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 7777766321 11122 479999999999999998765 34455566677777777787767765433 33344455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 482 MIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWST 561 (1479)
Q Consensus 482 ~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~ 561 (1479)
+.+..++.+...+..++..+..++-....+|.++|+++||.|+-|+.+.++..+.-++-.+..++.....+....+....
T Consensus 253 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 332 (659)
T TIGR00954 253 GVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIV 332 (659)
T ss_pred HHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 55666777888888888888888888999999999999999999998888876655555555555444444333222222
Q ss_pred H----HHHHHHHHHHHHHh--c---CccCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 000463 562 P----VLISTLTFATALLF--G---VPLDAGSVFTT----TTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSREL 628 (1479)
Q Consensus 562 p----~~v~~~tF~~~~l~--~---~~Lt~~~vFt~----lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~ 628 (1479)
. ..+..+..+..++. | +.+|.+..+.. ..++..+..|+..+...+..+.++.++.+||.++++.++.
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~ 412 (659)
T TIGR00954 333 AKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDD 412 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11222222222222 1 46887764442 3346677899999999999999999999999999975321
Q ss_pred cc------ccccc-----------------ccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCC
Q 000463 629 VN------ESVER-----------------VEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSG 685 (1479)
Q Consensus 629 ~~------~~~~~-----------------~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsG 685 (1479)
.. ..... .........|+++|++|.|++ ++++|+|+||++++||+++|+||||||
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl~i~~Ge~~~IvG~nGsG 490 (659)
T TIGR00954 413 VKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSFEVPSGNHLLICGPNGCG 490 (659)
T ss_pred HhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceEEECCCCEEEEECCCCCC
Confidence 10 00000 000012346999999999963 347999999999999999999999999
Q ss_pred hHHHHHHHhcCcccCCcEEEECC--eEEEEeccCcCCCCcHHHHHhcCCC--------CChhhHHHHHHHhchHHHHHhc
Q 000463 686 KSSLLASILGEMHKISGKVKVCG--TTAYVAQTSWIQNGTIEENILFGLP--------MNRAKYGEVVRVCCLEKDLEMM 755 (1479)
Q Consensus 686 KSTLl~~llG~~~~~~G~i~~~g--~iayv~Q~~~i~~~Tv~enI~fg~~--------~~~~~~~~v~~~~~l~~dl~~l 755 (1479)
||||+++|+|+++|++|+|.+++ +++||||+|+++++|++|||.++.. .++++..+.++.+++.+.++.
T Consensus 491 KSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~- 569 (659)
T TIGR00954 491 KSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER- 569 (659)
T ss_pred HHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh-
Confidence 99999999999999999999865 6999999999999999999998742 233455667777888776766
Q ss_pred ccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccC
Q 000463 756 EYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNV 835 (1479)
Q Consensus 756 ~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~ 835 (1479)
+.|.+|..+ .+.+||||||||++||||++++|+++|||||||+||+++.+.+.+.+.+ .|+|+|+|||+++.++.|
T Consensus 570 ~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~---~~~tvI~isH~~~~~~~~ 645 (659)
T TIGR00954 570 EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCRE---FGITLFSVSHRKSLWKYH 645 (659)
T ss_pred cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHH---cCCEEEEEeCchHHHHhC
Confidence 888888765 5779999999999999999999999999999999999999988765433 389999999999999899
Q ss_pred CEEEEEeC
Q 000463 836 DLILVMRE 843 (1479)
Q Consensus 836 D~i~~l~~ 843 (1479)
|++++|++
T Consensus 646 d~il~l~~ 653 (659)
T TIGR00954 646 EYLLYMDG 653 (659)
T ss_pred CEEEEEeC
Confidence 99999973
No 102
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.6e-50 Score=460.49 Aligned_cols=213 Identities=40% Similarity=0.771 Sum_probs=206.3
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
|.|+|+|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|+|||+|+.+++.+++|++|
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999998656679999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCE
Q 000463 1346 GIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRL 1425 (1479)
Q Consensus 1346 ~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1425 (1479)
++|||+|.+|++|+++|++|++..+++++|++++.+++.+++..+|++||+.++|+|.+||+|||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998877889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1426 LFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1426 LiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||||||++||+++++.+++.|++.+++||||+||||++++..||||+||++|+
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~ 213 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENK 213 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCe
Confidence 999999999999999999999999888999999999999999999999999996
No 103
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-47 Score=432.23 Aligned_cols=459 Identities=21% Similarity=0.280 Sum_probs=351.8
Q ss_pred HHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 403 TLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLH-AVWLMPLQISVALILLYNCLGASVITTVVGIIGV 481 (1479)
Q Consensus 403 ~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~~-~~w~~plqi~lal~lL~~~lG~s~l~gl~~~il~ 481 (1479)
.+.-..|++.+.||-.-..+..+|.+---|.--..-|+...+++- .+.-..+++.+...++|...||...+..++++++
T Consensus 16 ~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~t~vtv~l 95 (497)
T COG5265 16 VLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALTTLVTVIL 95 (497)
T ss_pred HHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHHH
Confidence 445567888888877655555566654444444444555554432 2333457889999999999998776666665555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHhchHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
Q 000463 482 MIFVVMGTKRNNRFQFNVMKNRDSRMK-ATNEMLNYMRVIKFQAWEDHFNKRILSFRES----EFGWLTKFMYSISGNII 556 (1479)
Q Consensus 482 ~~~~~~~~~~~~~~q~~~m~~~D~R~~-~~sEiL~~Ik~IKl~~wE~~f~~~I~~~R~~----El~~l~k~~~~~a~~~~ 556 (1479)
..+-.+...--+.-.++.|+..|...+ ...+.|-|-.++|.|+-|+.+.++-....+. +++.......+......
T Consensus 96 Y~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~Ln~gQ~~ 175 (497)
T COG5265 96 YLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVLNFGQTA 175 (497)
T ss_pred HHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 544443333333444556776676654 4568899999999999998877776554443 33332222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccc
Q 000463 557 VMWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERV 636 (1479)
Q Consensus 557 ~~~~~p~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~ 636 (1479)
++... +....+-+..-...+.+|.+...-.-++...+..|++.+......+-|+++..+++.+.+..+-...+.....
T Consensus 176 I~~~~--l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~pda~ 253 (497)
T COG5265 176 IFSTG--LRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDAPDAP 253 (497)
T ss_pred HHHHH--HHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccCCCCc
Confidence 22111 1112223333345678999999999999999999999999999999999999999999887653322221111
Q ss_pred cCC-CCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------
Q 000463 637 EGC-DDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------ 709 (1479)
Q Consensus 637 ~~~-~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------ 709 (1479)
+-. .....+.+++++|.|++ .+++|+++||++++|+.++++|++|+||||+++.|.+++++.+|.|.++|+
T Consensus 254 ~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qdir~vt 331 (497)
T COG5265 254 PLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQDIRDVT 331 (497)
T ss_pred cccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchhHHHhH
Confidence 111 23467999999999974 468999999999999999999999999999999999999999999999994
Q ss_pred -------EEEEeccCcCCCCcHHHHHhcCCCCC-hhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHH
Q 000463 710 -------TAYVAQTSWIQNGTIEENILFGLPMN-RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1479)
Q Consensus 710 -------iayv~Q~~~i~~~Tv~enI~fg~~~~-~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1479)
||.|||+.-+||.|+..||.+|.|.- .+......++.++...++.+|+|.+|.+||+|-.|||||||||++|
T Consensus 332 q~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekqrvaia 411 (497)
T COG5265 332 QQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQRVAIA 411 (497)
T ss_pred HHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHHHHHHH
Confidence 79999999999999999999998742 3334456777788888999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcc
Q 000463 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMD 861 (1479)
Q Consensus 782 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~ 861 (1479)
|++.++|+|++|||.|||||.|+.+.|-. .++...+|+|.+++.|+++.+-.||.|+||++|+|+|.|+++|++..++.
T Consensus 412 r~ilk~p~il~~deatsaldt~te~~iq~-~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ll~~~g~ 490 (497)
T COG5265 412 RTILKNPPILILDEATSALDTHTEQAIQA-ALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEELLAAGGL 490 (497)
T ss_pred HHHhcCCCEEEEehhhhHhhhhHHHHHHH-HHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHHHHHcCCh
Confidence 99999999999999999999999998854 45666789999999999999999999999999999999999999999998
Q ss_pred hHHHH
Q 000463 862 FGALV 866 (1479)
Q Consensus 862 f~~l~ 866 (1479)
|+++.
T Consensus 491 ya~mw 495 (497)
T COG5265 491 YAEMW 495 (497)
T ss_pred HHHHh
Confidence 88764
No 104
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-47 Score=448.40 Aligned_cols=242 Identities=24% Similarity=0.420 Sum_probs=206.7
Q ss_pred HHhhhHHHHHHhhcCccchhcccc------CC---CCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEE
Q 000463 1231 NRMVSVERIKQFTEIPSEAAWKME------DR---LPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVV 1301 (1479)
Q Consensus 1231 ~~~~sveRi~~~~~~~~E~~~~~~------~~---~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIV 1301 (1479)
..+.+++|+.+|...+.|.....+ +. ..+..||..|.|+|+|++++|+.+.+++|+|+||+|++||++||+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~Iv 114 (329)
T PRK14257 35 QKLNKYQRAFAWLKLPKQKKAELKQFLNKKKTQVDLLKEDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFI 114 (329)
T ss_pred hccccccchhhHHhcccccchhhhhcccccccccccccCCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEE
Confidence 346677777777766555332111 10 113469999999999999999865567999999999999999999
Q ss_pred CCCCCCHHHHHHHHhccCC-----CCccEEEEcCEecC--CCChhhhhcceEEEcCccccccccHhhhcC--C-CCCCCH
Q 000463 1302 GRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDIS--LLGLHDLRSRFGIIPQEPVLFEGTVRSNID--P-IGQYSD 1371 (1479)
Q Consensus 1302 GrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~--~i~l~~LR~~i~iIpQdp~LF~gTIR~NLd--p-~~~~sd 1371 (1479)
||||||||||+++|+|+++ |.+|+|.|||+|+. ++++.++|+++++|||+|.+|++|+++||+ | +..+++
T Consensus 115 G~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~ 194 (329)
T PRK14257 115 GPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGIND 194 (329)
T ss_pred CCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCCh
Confidence 9999999999999999997 57999999999997 456788999999999999999999999998 3 233555
Q ss_pred HHH-----HHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHH
Q 000463 1372 EEI-----WKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRI 1446 (1479)
Q Consensus 1372 ~eI-----~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~ 1446 (1479)
++. .++++.+++. .++++.+++.|.+||||||||+|||||++++|+||||||||++||+++++.+++.
T Consensus 195 ~~~~~~~~~~~l~~~~L~-------~~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~ 267 (329)
T PRK14257 195 RKILEKIVEKSLKSAALW-------DEVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEEL 267 (329)
T ss_pred HHHHHHHHHHHHHHcCCc-------chhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 554 5566777764 3456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1447 IREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1447 I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++.++++|+|+||||++++.+ ||||+||++|+
T Consensus 268 i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~ 301 (329)
T PRK14257 268 ILELKKKYSIIIVTHSMAQAQRISDETVFFYQGW 301 (329)
T ss_pred HHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999998 99999999995
No 105
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=7.1e-46 Score=430.33 Aligned_cols=189 Identities=21% Similarity=0.342 Sum_probs=159.2
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.|.++||+|+|.++. ..+++++|-|.++++|++|||||+|||||++++.+.+.|..|.|.-.-.. +++
T Consensus 389 vi~~~nv~F~y~~~~-~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP-MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------KLP 456 (614)
T ss_pred eEEEeccccCCCCcc-hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------cch
Confidence 599999999998765 78999999999999999999999999999999999999999988654222 233
Q ss_pred EEcCc---cccccccHhhhcCC-CC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhcc
Q 000463 1347 IIPQE---PVLFEGTVRSNIDP-IG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1479)
Q Consensus 1347 iIpQd---p~LF~gTIR~NLdp-~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1421 (1479)
..-|. -..++-|.-+|+.| +. .-..+++...|.++||....+..|- ++||+|||.|+++||++++
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~p~----------~~LS~Gqr~rVlFa~l~~k 526 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVVPM----------SQLSDGQRRRVLFARLAVK 526 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccccch----------hhcccccchhHHHHHHHhc
Confidence 33333 34566677777755 33 3567889999999999865554443 3699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1422 ~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+|.||||||||++||.+|-....++|.+. +.+||+|+|+...|.. +++|++.++|.
T Consensus 527 qP~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~ 583 (614)
T KOG0927|consen 527 QPHLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGT 583 (614)
T ss_pred CCcEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCc
Confidence 99999999999999999999999999873 6789999999999988 89999888763
No 106
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-44 Score=425.73 Aligned_cols=264 Identities=23% Similarity=0.331 Sum_probs=220.1
Q ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccccCCCCCccEEEEeeEEEecC
Q 000463 577 GVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEVRDGVFSWDD 656 (1479)
Q Consensus 577 ~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~ 656 (1479)
.++++|+++|+++++|+.+..|+..+|..... .+|+++|+..+|.+...+.. ..+....|+++|++++|++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~nls~~y~~ 92 (329)
T PRK14257 22 LNELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKE--DFNHANVFEIRNFNFWYMN 92 (329)
T ss_pred cchhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccC--CCCcCceEEEEeeEEEecC
Confidence 35699999999999999999999988876543 57999999887754322111 1123468999999999964
Q ss_pred CCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC---------------eEEEEecc
Q 000463 657 ENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG---------------TTAYVAQT 716 (1479)
Q Consensus 657 ~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g---------------~iayv~Q~ 716 (1479)
..+++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++| .++|+||+
T Consensus 93 -~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~ 171 (329)
T PRK14257 93 -RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQK 171 (329)
T ss_pred -CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecC
Confidence 23579999999999999999999999999999999999996 5799998755 48999999
Q ss_pred CcCCCCcHHHHHhcCCCCC----hh----hHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCC
Q 000463 717 SWIQNGTIEENILFGLPMN----RA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1479)
Q Consensus 717 ~~i~~~Tv~enI~fg~~~~----~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 788 (1479)
||++++|++|||.|+..++ ++ .+.+.++.|++..++ .+.+++++.+|||||||||+||||++++|
T Consensus 172 ~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l-------~~~~~~~~~~LSgGqkqRl~LARAl~~~p 244 (329)
T PRK14257 172 PTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEV-------KDDLDKAGNALSGGQQQRLCIARAIALEP 244 (329)
T ss_pred CccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchh-------hhhhhCCcccCCHHHHHHHHHHHHHHhCC
Confidence 9999999999999875322 22 144556666654433 35688999999999999999999999999
Q ss_pred CEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 789 ~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
+|+||||||++||+++.+++. +++..+.+++|+|+|||+++++.. ||+|++|++|+|++.|+++++.+.
T Consensus 245 ~IlLLDEPts~LD~~~~~~i~-~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~ 314 (329)
T PRK14257 245 EVLLMDEPTSALDPIATAKIE-ELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIH 314 (329)
T ss_pred CEEEEeCCcccCCHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999865 566666678999999999999887 999999999999999999998753
No 107
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.5e-44 Score=373.67 Aligned_cols=207 Identities=29% Similarity=0.428 Sum_probs=174.0
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1479)
.|+++|++++|. +..+|+|||++|++||.++|+||+||||||||++|.|+.+|++|+|.++|.
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 589999999995 457999999999999999999999999999999999999999999999992
Q ss_pred EEEEeccCcCC-CCcHHHHHhcCCCCCh--hhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhc
Q 000463 710 TAYVAQTSWIQ-NGTIEENILFGLPMNR--AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQ 786 (1479)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~~~~--~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~ 786 (1479)
+|+|+|+..+| ..||-|||..+.-.-. .+-+..-+|- +-++.....| .....+.+|||||||||||||||+.
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~---~lL~~VGL~~--ka~~yP~qLSGGQqQRVAIARALaM 153 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKAL---ELLEKVGLAD--KADAYPAQLSGGQQQRVAIARALAM 153 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHH---HHHHHcCchh--hhhhCccccCcHHHHHHHHHHHHcC
Confidence 68999998876 6799999998742111 1111111111 2233333333 2346788999999999999999999
Q ss_pred CCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 787 DCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 787 ~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
+|+++|+|||||||||+...++.+-.......|.|.|+|||++.|.+. ||||+.|++|+|+++|+++++..+
T Consensus 154 ~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 154 DPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred CCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 999999999999999999999998777777889999999999999987 799999999999999999998764
No 108
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-43 Score=386.84 Aligned_cols=201 Identities=31% Similarity=0.540 Sum_probs=179.7
Q ss_pred EEEEeeeeeecCC---CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCC---hhhh
Q 000463 1268 VDLIDLQVRYRSN---TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG---LHDL 1341 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~---~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~---l~~L 1341 (1479)
|+++||+..|+.. ...+|+||||+|++||..||+|+||||||||++++.|+-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7999999999863 346999999999999999999999999999999999999999999999999988775 5567
Q ss_pred hcceEEEcCcccccc-ccHhhhcC-CCC--CCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHH
Q 000463 1342 RSRFGIIPQEPVLFE-GTVRSNID-PIG--QYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1479)
Q Consensus 1342 R~~i~iIpQdp~LF~-gTIR~NLd-p~~--~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1413 (1479)
|++||+|+|++.|++ -||.+|+. |.. ..+. +.+.+.|+.+||.|....-| .+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 889999999999998 69999996 432 3444 45678899999988776665 36899999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1414 ~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+|||||..+|+||+.|||||+|||+|-+.|.+.|++.- -|-|+++|||.++.+++ ||||.||++|+
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~ 219 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGR 219 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCE
Confidence 99999999999999999999999999999999988754 37899999999999999 99999999996
No 109
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.4e-42 Score=387.52 Aligned_cols=214 Identities=59% Similarity=1.029 Sum_probs=203.7
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
|.++++|++++|+....++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 56899999999975445699999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCE
Q 000463 1346 GIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRL 1425 (1479)
Q Consensus 1346 ~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1425 (1479)
+++||+|.+|++|+++|++++...+++++.++++..++.+++..+|.|+++.+.+.+.+||+|||||++|||||+++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998776778899999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1426 LFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1426 LiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|+|||||++||+.+.+.+.+.|++..++.|+|+++|+++.+..||+|++|++|+
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~ 214 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGR 214 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCe
Confidence 999999999999999999999998877899999999999999999999999985
No 110
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-43 Score=366.24 Aligned_cols=200 Identities=31% Similarity=0.506 Sum_probs=179.6
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecC-CCChhhhhcce
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDIS-LLGLHDLRSRF 1345 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~-~i~l~~LR~~i 1345 (1479)
-|+++|++.+|.. ..||||||++|++||++.|+||||||||||+++|.||.+|++|+|.|||.++. ..++..+|+++
T Consensus 2 mi~i~~l~K~fg~--~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGD--KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCC--eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 4899999999974 35999999999999999999999999999999999999999999999998774 33788999999
Q ss_pred EEEcCccccccc-cHhhhcCCCC----CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1346 GIIPQEPVLFEG-TVRSNIDPIG----QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~----~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
|+|+|...||.- |+.+|+.... ..+ .+.-.+.|+++||.|....-|.. |||||+||++||
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~q-----------LSGGQqQRVAIA 148 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPAQ-----------LSGGQQQRVAIA 148 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCccc-----------cCcHHHHHHHHH
Confidence 999999999976 9999996321 222 34456789999999998888854 699999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~-~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||.-+|+|+++|||||+|||+.-..+.+.+++..+ |-|.|+|||.+...++ +|||+.||+|+
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~ 213 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGK 213 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCE
Confidence 999999999999999999999999999999999764 6799999999999998 99999999994
No 111
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=6e-42 Score=392.63 Aligned_cols=216 Identities=48% Similarity=0.832 Sum_probs=203.7
Q ss_pred CCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhc
Q 000463 1264 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRS 1343 (1479)
Q Consensus 1264 ~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~ 1343 (1479)
..|.|+++|++++|+.....+|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 46789999999999754456999999999999999999999999999999999999999999999999999998889999
Q ss_pred ceEEEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCC
Q 000463 1344 RFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1479)
Q Consensus 1344 ~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1423 (1479)
+++++||+|.+|++|+++|+++.....+++++++++.+++.+.+..+|.|+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876545677889999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1424 RLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1424 ~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
++|||||||++||+++.+.+.+.|++..+++|+|+++|+++.+..||||++|++|+
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~ 231 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGI 231 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCE
Confidence 99999999999999999999999998777899999999999999999999999985
No 112
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.5e-41 Score=388.51 Aligned_cols=190 Identities=22% Similarity=0.363 Sum_probs=165.4
Q ss_pred CCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhc
Q 000463 1264 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRS 1343 (1479)
Q Consensus 1264 ~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~ 1343 (1479)
.+..+++.+|+|.|.++.++.++++++.++.-+++++||++|+||||+++++.+-.+|..|.+-+.+ |.
T Consensus 359 ~~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ 427 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RL 427 (582)
T ss_pred CCCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cc
Confidence 4457999999999999887899999999999999999999999999999999999999999988876 78
Q ss_pred ceEEEcCccccccccHhhhcC-------CCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1344 RFGIIPQEPVLFEGTVRSNID-------PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1344 ~i~iIpQdp~LF~gTIR~NLd-------p~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
+|++-.|.-+=| ..-|.. -++.-+++|+++.|...|+...+...+ + ..||||||-|+++|
T Consensus 428 ri~~f~Qhhvd~---l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~s--i--------~~LSGGQKsrvafA 494 (582)
T KOG0062|consen 428 RIKYFAQHHVDF---LDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQS--I--------ASLSGGQKSRVAFA 494 (582)
T ss_pred eecchhHhhhhH---HHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhcc--c--------cccCCcchhHHHHH
Confidence 999999988644 233321 123348999999999999887665543 1 35899999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
-....+|.+|||||||..||.++-..+-++|+. | +.-||+|+|+.+.|.. |+.++|.++|+
T Consensus 495 ~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~-F-~GGVv~VSHd~~fi~~~c~E~Wvve~g~ 556 (582)
T KOG0062|consen 495 ACTWNNPHLLVLDEPTNHLDRDSLGALAKALKN-F-NGGVVLVSHDEEFISSLCKELWVVEDGK 556 (582)
T ss_pred HHhcCCCcEEEecCCCccccHHHHHHHHHHHHh-c-CCcEEEEECcHHHHhhcCceeEEEcCCc
Confidence 999999999999999999999999999999986 4 4569999999999988 99999999995
No 113
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.4e-41 Score=382.30 Aligned_cols=212 Identities=35% Similarity=0.631 Sum_probs=197.5
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+++|++++|+.+..++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999988888889999999
Q ss_pred EcCccccccccHhhhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEE
Q 000463 1348 IPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLL 1426 (1479)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1426 (1479)
+||++.+|+.|+++||.... ..+.+++.++++..++.+++..+|.|+++.....+.+||||||||++||||++++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999999999997533 34567788889999999999999999999988889999999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1427 FMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1427 iLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||||||++||+.+.+.+.+.|++..+++|+|+++|+++.+..||+|++|++|+
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~ 213 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGR 213 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999877899999999999998899999999985
No 114
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.3e-42 Score=355.57 Aligned_cols=205 Identities=28% Similarity=0.415 Sum_probs=183.7
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCc-----cEEEEcCEecCC--CCh
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSG-----GRIIIDGIDISL--LGL 1338 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~-----G~I~IDG~dI~~--i~l 1338 (1479)
..++++|+++.|.. ..+|+|||++|++++.+|++|||||||||++++|.|+.+..+ |+|.+||.||-+ ++.
T Consensus 6 ~~~~~~~l~~yYg~--~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGD--KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECc--hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 46899999999974 459999999999999999999999999999999999999875 999999999976 578
Q ss_pred hhhhcceEEEcCccccccccHhhhcCCCC---C----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1339 HDLRSRFGIIPQEPVLFEGTVRSNIDPIG---Q----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
-.||+++|+|+|.|.-|..||+||+.... . .-||-+.++|+++.|||.+.. .| .+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD---rL----~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD---RL----HKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH---Hh----hCCccCCChhHHH
Confidence 89999999999999999999999997431 1 224667889999999998864 33 3456679999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||||||.-+|+||+||||||+||+.+...|.+.|.+..++-||++|||.+.-... +|+...+-.|+
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~ 225 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGE 225 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccE
Confidence 999999999999999999999999999999999999999999999999999998776 89998888774
No 115
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-40 Score=419.00 Aligned_cols=189 Identities=28% Similarity=0.384 Sum_probs=159.2
Q ss_pred CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC--CCccEEEEcCEecCCCChhhhhcceEEEcCcc-cccc
Q 000463 1280 NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE--PSGGRIIIDGIDISLLGLHDLRSRFGIIPQEP-VLFE 1356 (1479)
Q Consensus 1280 ~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~--p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp-~LF~ 1356 (1479)
+....|+|||=-++||--+|++|.||||||||++.|.+-.. ..+|.|+|||.+..+ +..++++|||-|++ ++-+
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 44568999999999999999999999999999999997653 357999999998765 78899999999988 4656
Q ss_pred ccHhhhcCC------CCCCCHHH----HHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCC-CE
Q 000463 1357 GTVRSNIDP------IGQYSDEE----IWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS-RL 1425 (1479)
Q Consensus 1357 gTIR~NLdp------~~~~sd~e----I~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~-~I 1425 (1479)
-||||-|.. -.+.+++| +.++.+..+|.+.- |..||+-|+.||++||.||.||=-|+.|| .|
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-------daiVG~~G~GLs~eQRKrLTIgVELvA~P~~i 951 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-------DALVGLPGSGLSTEQRKRLTIGVELVANPSSI 951 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-------hhhccCCCCCCCHHHhceeeEEEEEecCCcee
Confidence 699999942 12344443 55666666665543 45688888899999999999999999999 89
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhh--hhcCEEEEEeCC
Q 000463 1426 LFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTV--MDCDRVIVVDAG 1478 (1479)
Q Consensus 1426 LiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti--~~~DrIlVL~~G 1478 (1479)
|.||||||+||+++...|.+++|+.. .|+||++.-|.++.. +..||++.|++|
T Consensus 952 lFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrG 1007 (1391)
T KOG0065|consen 952 LFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRG 1007 (1391)
T ss_pred EEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcC
Confidence 99999999999999999999999975 689999999999753 459999999886
No 116
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.9e-41 Score=370.84 Aligned_cols=200 Identities=57% Similarity=0.963 Sum_probs=183.0
Q ss_pred CCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhh
Q 000463 1262 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL 1341 (1479)
Q Consensus 1262 wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L 1341 (1479)
||..+.++++|++++|+....++++|+||+|++||.+||+|++|||||||+++|.|+++|.+|+|.+||.++.+.+..++
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 89999999999999997543469999999999999999999999999999999999999999999999999998888889
Q ss_pred hcceEEEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhcc
Q 000463 1342 RSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1479)
Q Consensus 1342 R~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1421 (1479)
|++++++||+|.+|++|+++|+..+..++++++.++++ +.+....||+|||||++||||+++
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999998665566666666554 223456899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1422 ~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
+|+||||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||+|++|++|+
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~ 200 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGE 200 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCE
Confidence 9999999999999999999999999999877899999999999998899999999985
No 117
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.9e-40 Score=371.92 Aligned_cols=214 Identities=34% Similarity=0.600 Sum_probs=197.5
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
|+++++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999975334599999999999999999999999999999999999999999999999999888877888999
Q ss_pred EEEcCccccccccHhhhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCC
Q 000463 1346 GIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1479)
Q Consensus 1346 ~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1424 (1479)
+++||+|.+|..|+++|+.... ..+++++.++++..++.+.....|.|+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999899999997532 345677889999999999999999999999988889999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1425 LLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1425 ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
+|||||||++||.++...+.+.|++..+++|||++||+++.+..||+|++|++|+
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~ 215 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGR 215 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCe
Confidence 9999999999999999999999998766689999999999887799999999985
No 118
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-41 Score=360.12 Aligned_cols=208 Identities=28% Similarity=0.401 Sum_probs=173.6
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1479)
.|+++|+++.|. ++.+++|+||+|++||+++++||+||||||+|++|.++++|++|+|.++| ++
T Consensus 1 MI~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~I 77 (309)
T COG1125 1 MIEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKI 77 (309)
T ss_pred CceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhh
Confidence 378999999996 46799999999999999999999999999999999999999999999998 38
Q ss_pred EEEeccCcC-CCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhc
Q 000463 711 AYVAQTSWI-QNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQ 786 (1479)
Q Consensus 711 ayv~Q~~~i-~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~ 786 (1479)
|||-|+.-+ ++.||.|||.+-.. +++++.++. .++-++.+...-.....+.+.+|||||+|||.+||||+.
T Consensus 78 GYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r-----~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAa 152 (309)
T COG1125 78 GYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKR-----ADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAA 152 (309)
T ss_pred hhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHH-----HHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhc
Confidence 999999766 47899999987533 233332221 122223322221223456789999999999999999999
Q ss_pred CCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccc-ccCCEEEEEeCCEEEEecChHHHHhcC
Q 000463 787 DCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFL-HNVDLILVMREGMIVQSGRYNALLNSG 859 (1479)
Q Consensus 787 ~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l-~~~D~i~~l~~G~i~~~g~~~~l~~~~ 859 (1479)
+|+|+|+||||+||||-+++.+-+++.+...+ |||+|+||||+++. +-+|||.+|++|+|++.++|++++.+.
T Consensus 153 dP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 153 DPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred CCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 99999999999999999999998777665544 99999999999985 569999999999999999999998753
No 119
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-41 Score=369.89 Aligned_cols=207 Identities=29% Similarity=0.409 Sum_probs=176.3
Q ss_pred cEEEEeeEEEecCC--CCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000463 644 AVEVRDGVFSWDDE--NGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~--~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1479)
.|+++++++.|... ...++|+||||+|++||+.+|+|.+|+|||||+++|.|+-.|++|+|.++|
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 37899999999753 124689999999999999999999999999999999999999999999999
Q ss_pred ---eEEEEeccCcCCC-CcHHHHHhcCCCCCh----hhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHH
Q 000463 709 ---TTAYVAQTSWIQN-GTIEENILFGLPMNR----AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 709 ---~iayv~Q~~~i~~-~Tv~enI~fg~~~~~----~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1479)
+||+++|++.+++ .||.|||.|+.+... +..++|.+ -++.+...| ..+..+.+|||||||||+|
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~e------lLelVgL~d--k~~~yP~qLSGGQKQRVaI 152 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAE------LLELVGLSD--KADRYPAQLSGGQKQRVAI 152 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHH------HHHHcCChh--hhccCchhcCcchhhHHHH
Confidence 3899999998876 799999999865432 22233332 234443333 3457889999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
||||+.+|+|+|.|||||||||++.+.|.+.+.+... -|-|+++|||.++.++. |||+.||++|+++++|+..++..+
T Consensus 153 ARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~ 232 (339)
T COG1135 153 ARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFAN 232 (339)
T ss_pred HHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcC
Confidence 9999999999999999999999999999976665544 39999999999999987 999999999999999999988754
No 120
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-40 Score=373.73 Aligned_cols=213 Identities=36% Similarity=0.652 Sum_probs=198.6
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
|.++++|++++|+.. .++++|+||+|++||++||+|+||||||||+++|.|+.+|.+|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 468999999999643 3599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcCccccccccHhhhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCC
Q 000463 1346 GIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1479)
Q Consensus 1346 ~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1424 (1479)
+|+||+|.+|.+|+++|+.... ...++++.++++.+++.+++..+|.|+++.+.....+||+|||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999997543 345678889999999999999999999999988889999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1425 LLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1425 ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
+|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+..||+|++|++|+
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~ 214 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGK 214 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCe
Confidence 9999999999999999999999998767899999999999998899999999985
No 121
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-40 Score=373.77 Aligned_cols=212 Identities=33% Similarity=0.573 Sum_probs=197.2
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+++|++++|+....++++|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999997543359999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EcCccccccccHhhhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEE
Q 000463 1348 IPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLL 1426 (1479)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1426 (1479)
+||+|.+|..|+++|+.... .++.+++.++++..++.+++..+|.|+++.......+||+|||||++|||||+++|++|
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999997542 34667788888999999999999999999998889999999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1427 FMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1427 iLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|+
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~ 213 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGK 213 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCe
Confidence 99999999999999999999999878899999999999998899999999995
No 122
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=360.90 Aligned_cols=197 Identities=34% Similarity=0.434 Sum_probs=162.7
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------eEEEEec
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------TTAYVAQ 715 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------~iayv~Q 715 (1479)
.+++++++++|+. ..+|+||||+|++||+++|+||+||||||||++|+|+.+|++|+|.++| .+|||+|
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ 79 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQ 79 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEec
Confidence 5789999999964 6799999999999999999999999999999999999999999999988 4799999
Q ss_pred cCcCC-CCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEe
Q 000463 716 TSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLD 794 (1479)
Q Consensus 716 ~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLD 794 (1479)
++-++ -.||+|||.||.+.....-.+. + ....+-++.....+ .-+..+.+|||||||||+|||||+.+|+++|||
T Consensus 80 ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~-~-~~a~~~L~~VgL~~--~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLlD 155 (248)
T COG1116 80 EDALLPWLTVLDNVALGLELRGKSKAEA-R-ERAKELLELVGLAG--FEDKYPHQLSGGMRQRVAIARALATRPKLLLLD 155 (248)
T ss_pred cCcccchhhHHhhheehhhccccchHhH-H-HHHHHHHHHcCCcc--hhhcCccccChHHHHHHHHHHHHhcCCCEEEEc
Confidence 97664 4799999999976532000000 0 12233344443322 234678999999999999999999999999999
Q ss_pred CccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccc-cCCEEEEEeC--CEEE
Q 000463 795 DVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMRE--GMIV 847 (1479)
Q Consensus 795 ep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~-~~D~i~~l~~--G~i~ 847 (1479)
|||+|||+.|+.++.+.+.+.+.+ ++|+++||||+++.- -+|||++|.+ |+|.
T Consensus 156 EPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 156 EPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 999999999999998888777654 899999999999865 5899999998 5553
No 123
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=3.1e-40 Score=371.66 Aligned_cols=216 Identities=29% Similarity=0.525 Sum_probs=197.6
Q ss_pred CCccEEEEeeeeeecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhh
Q 000463 1264 AHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLR 1342 (1479)
Q Consensus 1264 ~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR 1342 (1479)
..|.++++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+....|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45789999999999753 23599999999999999999999999999999999999999999999999999888777888
Q ss_pred cceEEEcCccccccccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhcc
Q 000463 1343 SRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1479)
Q Consensus 1343 ~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1421 (1479)
++++++||+|.+|++|+++|++.. .....+++++..+..++.+++..+|.|+++.+.+...+||||||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999843 3344566777777888999999999899998888899999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1422 ~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
+|++|||||||++||+++.+.+.+.|++..+++|+|+|+|+++.+..||+|++|++|+
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~ 225 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGR 225 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCc
Confidence 9999999999999999999999999999877789999999999998899999999996
No 124
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.8e-40 Score=364.19 Aligned_cols=199 Identities=27% Similarity=0.443 Sum_probs=183.5
Q ss_pred EEEEeeeeeecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcc
Q 000463 1268 VDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSR 1344 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~ 1344 (1479)
++++||+++|++.. +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57899999997642 3699999999999999999999999999999999999999999999999 6
Q ss_pred eEEEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCC
Q 000463 1345 FGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1479)
Q Consensus 1345 i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1424 (1479)
|+++||+|.+|++|+++|+......++++.+++++.+++.+++..+|.|+++.+.+.+.+||+|||||++||||++++|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998755566778889999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHH-HHHHHc-CCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1425 LLFMDEATASVDSQTDAEIQR-IIREEF-AACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1425 ILiLDEaTs~lD~~Te~~Iq~-~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
+++|||||++||+++.+.+.+ .+++.. ++.|||++||+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999887766 566554 3689999999999999999999999996
No 125
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-40 Score=364.60 Aligned_cols=210 Identities=30% Similarity=0.478 Sum_probs=170.3
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----------eEEE
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----------TTAY 712 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------~iay 712 (1479)
..|+++|++++|++ . ++|+||||++++|++++|+||||||||||+++|+|.++|.+|+|.+.| +|||
T Consensus 3 ~~i~v~nl~v~y~~--~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgY 79 (254)
T COG1121 3 PMIEVENLTVSYGN--R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGY 79 (254)
T ss_pred cEEEEeeeEEEECC--E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEE
Confidence 46899999999963 2 699999999999999999999999999999999999999999999876 4999
Q ss_pred Eecc---CcCCCCcHHHHHhcCCCCChhhHHHH--HHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 713 VAQT---SWIQNGTIEENILFGLPMNRAKYGEV--VRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 713 v~Q~---~~i~~~Tv~enI~fg~~~~~~~~~~v--~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
|||. .|-+..||+|-+.+|......++.+. -+....++.++.....+ .......+|||||+|||-|||||+++
T Consensus 80 VPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~--~~~r~i~~LSGGQ~QRV~lARAL~~~ 157 (254)
T COG1121 80 VPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMED--LRDRQIGELSGGQKQRVLLARALAQN 157 (254)
T ss_pred cCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchh--hhCCcccccCcHHHHHHHHHHHhccC
Confidence 9996 46788999999999865433222110 00111222333333222 23456678999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
||+|+|||||+|+|+.++..+++.+.+...+|+||++||||++.+. .+|+|+.|+ +++...|++++..+.
T Consensus 158 p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~~~ 228 (254)
T COG1121 158 PDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVLTE 228 (254)
T ss_pred CCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhccCH
Confidence 9999999999999999999999766666666999999999999876 599999996 467788999888753
No 126
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=6.1e-40 Score=376.78 Aligned_cols=224 Identities=26% Similarity=0.348 Sum_probs=200.6
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1479)
.|+++|+++.|++. ..++|+|+||+|++||+++|+|+||||||||+++|.|+++ .+|+|.++| .+
T Consensus 2 ~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 2 QMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred eEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 48899999999643 3469999999999999999999999999999999999998 899999988 37
Q ss_pred EEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 711 AYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 711 ayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
+|+||+|+++++|++||+....+...++..+.++.+++...+..+|.+.++.+++.|.+||||||||++||||++.+|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999964334556667778888999988999999999999999999999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHHHhh
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVAAHE 870 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~~~ 870 (1479)
+||||||++||+.+.+.+.+.+.+ ..+++|+|+|||+++.+..||+|++|++|++++.|+++++++....|..++....
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~-~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQ-AFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHH-hcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhhcc
Confidence 999999999999999888765543 4468999999999999888999999999999999999999987777777776543
No 127
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-40 Score=364.04 Aligned_cols=196 Identities=31% Similarity=0.480 Sum_probs=172.6
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.|+++|++++|... + ||+||||+|++||.+||+||||||||||+++++|+.+|++|+|.++|.+++.... +.+||
T Consensus 4 ~i~v~nl~v~y~~~-~-vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR-P-VLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE-e-eeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 59999999999865 4 9999999999999999999999999999999999999999999999988765422 57999
Q ss_pred EEcCcc---ccccccHhhhcCCCC-----------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHH
Q 000463 1347 IIPQEP---VLFEGTVRSNIDPIG-----------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1479)
Q Consensus 1347 iIpQdp---~LF~gTIR~NLdp~~-----------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1412 (1479)
||||.. .-|.-||+|-+.... ..+.+++.+||+++++.++..+ +++ .|||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-------~i~----~LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-------QIG----ELSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-------ccc----ccCcHHHHH
Confidence 999965 357889999885421 1234889999999999987543 343 499999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-CcEEEEEccChhhhhh-cCEEEEEeCC
Q 000463 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-ACTIISIAHRIPTVMD-CDRVIVVDAG 1478 (1479)
Q Consensus 1413 l~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~-~~TvI~IAHRl~ti~~-~DrIlVL~~G 1478 (1479)
+.|||||+++|++|+|||||++||+.++..|.+.|++..+ ||||++|+|+++.+++ ||+|+.|++.
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~~ 215 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNRH 215 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcCe
Confidence 9999999999999999999999999999999999999875 8999999999999987 9999999753
No 128
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.2e-40 Score=356.20 Aligned_cols=201 Identities=31% Similarity=0.490 Sum_probs=176.5
Q ss_pred EEEEeeeeeecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh---h-
Q 000463 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---L- 1341 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---L- 1341 (1479)
++++||+..|..+. ..+|+|+||+|++||.|+|+||||||||||+++|-++-.|++|+|.++|.|+..++-++ +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999997543 36999999999999999999999999999999999999999999999999999998544 3
Q ss_pred hcceEEEcCccccccc-cHhhhcC-C--CCCC----CHHHHHHHHHHcCchHHHH-hCcCCccccccCCCCCCCchHHHH
Q 000463 1342 RSRFGIIPQEPVLFEG-TVRSNID-P--IGQY----SDEEIWKSLERCQLKDVVA-AKPDKLDSLVADSGDNWSVGQRQL 1412 (1479)
Q Consensus 1342 R~~i~iIpQdp~LF~g-TIR~NLd-p--~~~~----sd~eI~~aL~~~~L~~~i~-~lp~gLdt~v~e~G~nLSgGQrQr 1412 (1479)
|++||+|+|+..|++. |++||+. | +... .++.+.+.++..|+.+... ..|. .||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~-----------eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPS-----------ELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCch-----------hcCHHHHHH
Confidence 5679999999998876 9999996 2 2222 2456777788889987665 4453 579999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1413 l~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
+||||||+.+|+|++.||||++||.+|.+.|.+.+++.. .++|+|+|||+......|||++.|.+|+
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGK 219 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCe
Confidence 999999999999999999999999999999999999975 3789999999999999999999999995
No 129
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-40 Score=370.77 Aligned_cols=211 Identities=36% Similarity=0.632 Sum_probs=197.0
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+.+ ..+|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.+++..+...+|+.+++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 5789999999643 359999999999999999999999999999999999999999999999999998888889999999
Q ss_pred EcCccccccccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEE
Q 000463 1348 IPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLL 1426 (1479)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1426 (1479)
+||+|.+|++|+++|+... ...+++++.++++.+++.+.+..+|.|+++.+.....+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999743 345677888999999999999999999999999889999999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1427 FMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1427 iLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||||||++||+++...+.+.|++..++.|+|+++|+++.+..||++++|++|+
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~ 212 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGR 212 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCE
Confidence 99999999999999999999998766889999999999998999999999985
No 130
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-40 Score=353.31 Aligned_cols=199 Identities=31% Similarity=0.495 Sum_probs=180.5
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+|+||+++|. ...+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++|||
T Consensus 2 I~~~nvsk~y~--~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYG--NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcC--CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 79999999997 3459999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCccccccc-cHhhhcCCCC---CCC----HHHHHHHHHHcCch--HHHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1348 IPQEPVLFEG-TVRSNIDPIG---QYS----DEEIWKSLERCQLK--DVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~~---~~s----d~eI~~aL~~~~L~--~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
|-|..-||.- ||.+||..-. ..+ ++++.+.++.+||. ++..+.|. .|||||+||+.+||
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~-----------eLSGGQQQRVGv~R 148 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPH-----------ELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCch-----------hcCcchhhHHHHHH
Confidence 9999999966 9999996322 233 45678889999996 47777775 47999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||..+|+||+||||.++||+-|...+|+-+.+..+ ++|+|+|||++++... +|||.||++|+
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~ 213 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGE 213 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCe
Confidence 99999999999999999999999999999887653 7899999999998765 99999999996
No 131
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=7.6e-40 Score=371.51 Aligned_cols=212 Identities=34% Similarity=0.651 Sum_probs=195.8
Q ss_pred EEEEeeeeeecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1268 VDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
++++|++++|+.. ..++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+....|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4789999999753 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcCccccccccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCE
Q 000463 1347 IIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRL 1425 (1479)
Q Consensus 1347 iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1425 (1479)
++||+|.+|+.|+++|+... .....+++.+.++..++.+++..+|.|+++.+.....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999753 23456778888999999999999999999999888899999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1426 LFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1426 LiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||||||++||+.+.+.+.+.|++..+++|+|+++|+++.+..||+|++|++|+
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~ 214 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQ 214 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCE
Confidence 999999999999999999999998767899999999999998899999999995
No 132
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=6.3e-40 Score=366.56 Aligned_cols=201 Identities=26% Similarity=0.427 Sum_probs=176.9
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChh---hhhcc
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH---DLRSR 1344 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR~~ 1344 (1479)
++++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 689999999965434599999999999999999999999999999999999999999999999999876543 47889
Q ss_pred eEEEcCcccccc-ccHhhhcCCC----C---CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1345 FGIIPQEPVLFE-GTVRSNIDPI----G---QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1345 i~iIpQdp~LF~-gTIR~NLdp~----~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
++++||+|.+|. .|+++|+... + +..++++.++++.+++.+.....| .+||||||||++||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~la 150 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAIA 150 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999887 4999999631 1 113467888999999987665554 36899999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||+++|+||+|||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|+
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~ 215 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGR 215 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCc
Confidence 99999999999999999999999999999998864 47899999999999986 99999999996
No 133
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.6e-40 Score=365.42 Aligned_cols=210 Identities=30% Similarity=0.445 Sum_probs=171.1
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1479)
.++++|++|+|+ ++++|+|+||++++||+++|+|||||||||||++|+|.++|.+|+|.++| .+
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 478999999996 46899999999999999999999999999999999999999999999999 48
Q ss_pred EEEeccCcC-CCCcHHHHHhcCCCCChhhHH--HHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 711 AYVAQTSWI-QNGTIEENILFGLPMNRAKYG--EVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 711 ayv~Q~~~i-~~~Tv~enI~fg~~~~~~~~~--~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
||+||.+.. ++.||+|-+.+|+.....++. ..-+....++.++.+. ......+...+|||||||||.|||||+++
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~--~~~la~r~~~~LSGGerQrv~iArALaQ~ 156 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLG--LEHLADRPVDELSGGERQRVLIARALAQE 156 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhC--cHHHhcCcccccChhHHHHHHHHHHHhcC
Confidence 999999755 467999999999642211111 0000001111122221 11122345668999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhh-cCCcEEEEEccCCccc-ccCCEEEEEeCCEEEEecChHHHHhc
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGA-LKGKTIILVTHQVDFL-HNVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvTH~~~~l-~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
|+++|||||||+||....-++++.+.+.. .+|+|+|+|+||++.. ..||++++|++|+++.+|+++|+++.
T Consensus 157 ~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT~ 229 (258)
T COG1120 157 TPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLTE 229 (258)
T ss_pred CCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcCH
Confidence 99999999999999999999998877766 4599999999999985 56999999999999999999988763
No 134
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=369.10 Aligned_cols=465 Identities=18% Similarity=0.219 Sum_probs=326.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCch------hhHHHHhchhhHhhhhh
Q 000463 988 LFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSG------RILSRASTDQTNIDLFL 1061 (1479)
Q Consensus 988 ~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G------~ilnR~s~D~~~id~~l 1061 (1479)
..+.+|..++.+..++...+.++......+.-.-+-+.++++-+... .||.-...| ..=+|+..|+...-...
T Consensus 87 ~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~-~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t 165 (604)
T COG4178 87 QQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPR-RYYRLAQAGGIGLIDNPDQRIQEDIRNFTETT 165 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHhcccccCCCChHHhHHHHHHHHHhhH
Confidence 45778888888888888899999988888888888888888888877 444443333 22368888887765554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhH--------------HHHH-HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000463 1062 PFFVGITVAMYITLLGIFIITCQYAW--------------PTIF-LVIPL----AWANYWYRGYYLSTSRELTRLDSITK 1122 (1479)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~v~~~~~~--------------~~~~-~~ip~----~~~~~~~~~~y~~~~r~l~rl~~~~~ 1122 (1479)
-.....++.++++++...+++.-.+- .+++ +++.. .++..++.+...+-.-+..+.|+.-|
T Consensus 166 ~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR 245 (604)
T COG4178 166 LDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFR 245 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHH
Confidence 44455555665655555554442211 1111 11111 12223444444454555555555555
Q ss_pred hhhHHHHHHhhhcHHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhH---HHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 000463 1123 APVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNE---WLGFRLELLGSFTFCLATLFMILLPSSI 1199 (1479)
Q Consensus 1123 sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~---wl~~~l~~l~~~~~~~~~~~~v~~~~~~ 1199 (1479)
..+ .-.-+....|-.|+.|+.-.++..+..+.-...+......+. |.......+..++- ..+.+-....|.
T Consensus 246 ~~L----vrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P--~li~ap~~f~g~ 319 (604)
T COG4178 246 YSL----VRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLP--ILIAAPRYFSGQ 319 (604)
T ss_pred HHH----HHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHH--HHhccHhhhcCc
Confidence 433 334556677888887765554444444333332222222222 22222222222110 011111233567
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcC------ccchhccccCCCCCCCCCCCccEEEEee
Q 000463 1200 IKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEI------PSEAAWKMEDRLPPPNWPAHGNVDLIDL 1273 (1479)
Q Consensus 1200 ~~~g~vgl~l~y~~~l~~~l~~~~~~~~~~e~~~~sveRi~~~~~~------~~E~~~~~~~~~~~~~wp~~g~I~~~nv 1273 (1479)
++-|.+..+.+-..++...+.|++..+..+..-...+.|+.++.+. +.+.+.... .+....-.....|.|+|+
T Consensus 320 i~~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~nl 398 (604)
T COG4178 320 ITFGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTG-RRIDFDDNADHGITLENL 398 (604)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCccc-ccccccccccceeEEeee
Confidence 7778777777778888899999999999999999999999999742 211111100 000000001478999999
Q ss_pred eeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccc
Q 000463 1274 QVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPV 1353 (1479)
Q Consensus 1274 s~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~ 1353 (1479)
++.-+++. ..|++++|+++|||.+-|.|+||||||||+++|.|+++-.+|+|.+-. -+++-++||.|.
T Consensus 399 ~l~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY 466 (604)
T COG4178 399 SLRTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPY 466 (604)
T ss_pred eEECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCC
Confidence 99988766 589999999999999999999999999999999999999999987751 135889999999
Q ss_pred cccccHhhhcC-CCC--CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeC
Q 000463 1354 LFEGTVRSNID-PIG--QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDE 1430 (1479)
Q Consensus 1354 LF~gTIR~NLd-p~~--~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDE 1430 (1479)
+-.||+||-|. |.. +++|+|+.++|.+|+|.+++.++.+- +. -..-||+||||||++||.||+|||+++|||
T Consensus 467 ~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~-~~----W~~vLS~GEqQRlafARilL~kP~~v~LDE 541 (604)
T COG4178 467 LPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEE-DR----WDRVLSGGEQQRLAFARLLLHKPKWVFLDE 541 (604)
T ss_pred CCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhcc-Cc----HhhhcChhHHHHHHHHHHHHcCCCEEEEec
Confidence 99999999996 543 38999999999999999999987432 22 345699999999999999999999999999
Q ss_pred CCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeC
Q 000463 1431 ATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDA 1477 (1479)
Q Consensus 1431 aTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~ 1477 (1479)
|||+||.++|..+.+.++++.+++|||.|+||.....-.++.+-+++
T Consensus 542 ATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 542 ATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred chhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 99999999999999999999999999999999877777777766654
No 135
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=374.65 Aligned_cols=201 Identities=34% Similarity=0.467 Sum_probs=172.2
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EEE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TAY 712 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------iay 712 (1479)
.|+++|++++|++. .+++|+||+|++||+++++|||||||||||++|+|+.+|++|+|.++|+ +|+
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iam 79 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAM 79 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEE
Confidence 58999999999531 2999999999999999999999999999999999999999999999984 899
Q ss_pred EeccCcC-CCCcHHHHHhcCCCCCh-------hhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 713 VAQTSWI-QNGTIEENILFGLPMNR-------AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 713 v~Q~~~i-~~~Tv~enI~fg~~~~~-------~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
|+|+.-+ +++||+|||.||..... ++.+++.+...+.+ .+..++.+||||||||||||||+
T Consensus 80 VFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~-----------lL~r~P~~LSGGQrQRVAlaRAl 148 (338)
T COG3839 80 VFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEH-----------LLNRKPLQLSGGQRQRVALARAL 148 (338)
T ss_pred EeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChh-----------HHhcCcccCChhhHHHHHHHHHH
Confidence 9999776 57899999999986542 22223333333332 34467889999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
.++|+++|||||+|+||++.+..+-.++.+...+ |.|+|+||||..++. -+|||++|++|+|.+.|++.|+.++
T Consensus 149 Vr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~ 224 (338)
T COG3839 149 VRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYER 224 (338)
T ss_pred hcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhC
Confidence 9999999999999999999999988777665444 899999999988765 5999999999999999999999864
No 136
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=8.5e-40 Score=335.13 Aligned_cols=200 Identities=26% Similarity=0.447 Sum_probs=182.3
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh---hhcc
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---LRSR 1344 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR~~ 1344 (1479)
|+|+||+.+|+.+ +++|+||||+|++||.+=++|+|||||||++++|+|...|++|+|.++|.|++++.-++ ||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 7999999999987 77999999999999999999999999999999999999999999999999999998766 7999
Q ss_pred eEEEcCccccccc-cHhhhcC-CCC--CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1345 FGIIPQEPVLFEG-TVRSNID-PIG--QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1345 i~iIpQdp~LF~g-TIR~NLd-p~~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
||+|+||--|... |+.||+. |.. ..+ .+++.++|+++||.+....+|.. |||||+||+|||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~~-----------LSGGEQQRvaIA 149 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPSQ-----------LSGGEQQRVAIA 149 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCccc-----------cCchHHHHHHHH
Confidence 9999999987755 9999996 332 222 35678999999999999999964 699999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||+..+|++|+-||||-+||+++...|++.+.+.- .|.||++.||+.+.+.+ --|++.+++|+
T Consensus 150 RAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Gr 214 (223)
T COG2884 150 RAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGR 214 (223)
T ss_pred HHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCE
Confidence 99999999999999999999999999999998864 58899999999999988 57899999996
No 137
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.7e-39 Score=365.85 Aligned_cols=201 Identities=33% Similarity=0.511 Sum_probs=177.6
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccC-----CCCccEEEEcCEecCCCC--hhh
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLV-----EPSGGRIIIDGIDISLLG--LHD 1340 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~-----~p~~G~I~IDG~dI~~i~--l~~ 1340 (1479)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|.+|+|.+||.++.+.+ ...
T Consensus 1 i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGD--KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 578999999964 35999999999999999999999999999999999999 999999999999998776 567
Q ss_pred hhcceEEEcCccccccccHhhhcCCCC---C-C----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHH
Q 000463 1341 LRSRFGIIPQEPVLFEGTVRSNIDPIG---Q-Y----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1479)
Q Consensus 1341 LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1412 (1479)
+|++++++||++.+|..|+++|+.... . . .++++.++++..++.+.....++ +.+||||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~qr 149 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQR 149 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHHH
Confidence 889999999999999889999996421 1 1 23567888999998776554321 35799999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1413 l~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
++|||||+++|++|||||||++||+++.+.+.+.|++..+++|||+|+|+++.+.. ||||++|++|+
T Consensus 150 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~ 217 (227)
T cd03260 150 LCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGR 217 (227)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCE
Confidence 99999999999999999999999999999999999998666899999999999876 99999999995
No 138
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=349.04 Aligned_cols=202 Identities=30% Similarity=0.494 Sum_probs=173.3
Q ss_pred cEEEEeeeeeecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCC-hhhhhc
Q 000463 1267 NVDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG-LHDLRS 1343 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~-l~~LR~ 1343 (1479)
.++++|+++.|+... .++|+||||+|.+||.+||||+||||||||.++|.|+.+|++|+|.+||.+..... -+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 478999999997643 24999999999999999999999999999999999999999999999997765543 335788
Q ss_pred ceEEEcCccc--c-ccccHhhhcC-CCCC----CCHHHHHHHHHHcCchH-HHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1344 RFGIIPQEPV--L-FEGTVRSNID-PIGQ----YSDEEIWKSLERCQLKD-VVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1344 ~i~iIpQdp~--L-F~gTIR~NLd-p~~~----~sd~eI~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
.+.+|+|||. | -.-||++-|. |... -..++++++|+.+||.+ +..+.|. .||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~-----------eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPH-----------ELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCch-----------hcChhHHHHHH
Confidence 8999999995 2 2337777663 3322 23566999999999976 4455564 47999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCc--EEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAAC--TIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~--TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||.-+|++||+|||||+||.-..+.|.+.+.+..+++ |.|+|||++..+.. ||||+||++|+
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ 219 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQ 219 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCe
Confidence 9999999999999999999999999999999999877655 99999999999998 99999999995
No 139
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.6e-39 Score=383.08 Aligned_cols=201 Identities=30% Similarity=0.478 Sum_probs=177.8
Q ss_pred EEEEeeeeeecCC--CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh---hh
Q 000463 1268 VDLIDLQVRYRSN--TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---LR 1342 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR 1342 (1479)
|+++|++++|+.+ ..++|+||||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999642 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cceEEEcCcccccc-ccHhhhcCC-C--CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1343 SRFGIIPQEPVLFE-GTVRSNIDP-I--GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1343 ~~i~iIpQdp~LF~-gTIR~NLdp-~--~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
++|++|||++.+|. .|+++|+.. . ...+ ++++.++++.+++.+.....| ..||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----------SNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999995 699999962 1 1223 345788999999987665544 368999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||+.+|+||+||||||+||+++...|.+.|++..+ +.|||+|||+++.+.. ||||++|++|+
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~ 218 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGE 218 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999998754 7899999999999977 99999999995
No 140
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.7e-39 Score=359.93 Aligned_cols=200 Identities=29% Similarity=0.498 Sum_probs=177.1
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.++++|++++|. ..++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|++||.|+.+++.+++-++++
T Consensus 2 ~L~~~~ls~~y~--~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYG--GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEEC--CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 478999999997 356999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCccc-cccccHhhhcC----C----CCCCC--H-HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1347 IIPQEPV-LFEGTVRSNID----P----IGQYS--D-EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1347 iIpQdp~-LF~gTIR~NLd----p----~~~~s--d-~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
||||++. -|.-||+|-+. | +...+ | +.+.+||+.+++.++..+. + ..||||||||++
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~---~--------~~LSGGerQrv~ 148 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP---V--------DELSGGERQRVL 148 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc---c--------cccChhHHHHHH
Confidence 9999975 45559988774 2 22222 3 3578899999999886542 2 258999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhh-hcCEEEEEeCCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVM-DCDRVIVVDAGL 1479 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~-~~DrIlVL~~G~ 1479 (1479)
|||||.++|+||+|||||++||....-.|++.+++.. ++.|+|+|.|+++... .||++++|++|+
T Consensus 149 iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~ 216 (258)
T COG1120 149 IARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGK 216 (258)
T ss_pred HHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCe
Confidence 9999999999999999999999999999999999976 3699999999998765 599999999995
No 141
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-40 Score=358.42 Aligned_cols=207 Identities=29% Similarity=0.423 Sum_probs=169.3
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1479)
.|++++.++.|+ ..++++||+++|+.||++|+.|||||||||||++|+|+..|++|.|.++|+
T Consensus 2 ~i~i~~~~~~~~---~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~ 78 (345)
T COG1118 2 SIRINNVKKRFG---AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRK 78 (345)
T ss_pred ceeehhhhhhcc---cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcc
Confidence 477888888885 357899999999999999999999999999999999999999999999984
Q ss_pred EEEEeccCcCC-CCcHHHHHhcCCCCChhhH---HHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHh
Q 000463 710 TAYVAQTSWIQ-NGTIEENILFGLPMNRAKY---GEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1479)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~~~~~~~---~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 785 (1479)
||||+|+.-+| .+||.|||.||.+....+- +.-.++..+.+-.+.-+.+ ...+.+|||||||||||||||.
T Consensus 79 VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la-----~ryP~QLSGGQrQRVALARALA 153 (345)
T COG1118 79 VGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLA-----DRYPAQLSGGQRQRVALARALA 153 (345)
T ss_pred eeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchh-----hcCchhcChHHHHHHHHHHHhh
Confidence 79999997765 7899999999985431111 1111111222211111222 2467899999999999999999
Q ss_pred cCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000463 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 786 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
.+|+++||||||+|||++.++.+-.-+.+...+ |.|+++||||.++.. .||||++|++|+|.+.|+++|+...
T Consensus 154 ~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~ 228 (345)
T COG1118 154 VEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDH 228 (345)
T ss_pred cCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcC
Confidence 999999999999999999999886655555555 899999999999865 5999999999999999999999754
No 142
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-39 Score=351.86 Aligned_cols=194 Identities=26% Similarity=0.395 Sum_probs=174.5
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.+++++|+.+|.. ..||+||||+|++||.|+|+||||||||||++++.|+..|++|+|.+||.++.. -...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~-----p~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTG-----PGPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCC-----CCCCEE
Confidence 5889999999976 569999999999999999999999999999999999999999999999998743 356799
Q ss_pred EEcCccccccc-cHhhhcCCCCC-------CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHH
Q 000463 1347 IIPQEPVLFEG-TVRSNIDPIGQ-------YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1479)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~~~-------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1418 (1479)
+|+|++.||.- ||++|+...-+ -..+.+.++|+++||.++-...|.. ||||||||++||||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~q-----------LSGGMrQRVaiARA 144 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPHQ-----------LSGGMRQRVAIARA 144 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCccc-----------cChHHHHHHHHHHH
Confidence 99999999998 99999963211 1245689999999999999888864 69999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCC
Q 000463 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAG 1478 (1479)
Q Consensus 1419 LLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G 1478 (1479)
|+.+|+||+||||.++||..|...+|+-+.+..+ ++||++|||++++... +|||+||.++
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 9999999999999999999999999999988764 5899999999998766 9999999985
No 143
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=5.6e-39 Score=359.40 Aligned_cols=211 Identities=21% Similarity=0.347 Sum_probs=188.3
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCCh----hhhhc
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL----HDLRS 1343 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l----~~LR~ 1343 (1479)
+.+.|+.++|+.+ .++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+
T Consensus 1 ~~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 1 VQVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred CeeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 3577899999866 459999999999999999999999999999999999999999999999999876543 34567
Q ss_pred ceEEEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCC
Q 000463 1344 RFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1479)
Q Consensus 1344 ~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1423 (1479)
.++++||+|.+|+.|+++|+.....+++++.+++++.+++.+.+..+|.|+++.+.....+||+|||||++||||++++|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 89999999999999999999865445677788999999999999999999999998888999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHH--HHHHHc-CCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1424 RLLFMDEATASVDSQTDAEIQR--IIREEF-AACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1424 ~ILiLDEaTs~lD~~Te~~Iq~--~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
+||||||||++||..+.+.+.+ .++... .+.|+|++||+.+.+..||+|++|++|.
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 9999999999999999888877 444432 3689999999999998899999999985
No 144
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.8e-39 Score=351.54 Aligned_cols=200 Identities=31% Similarity=0.441 Sum_probs=161.3
Q ss_pred EEEEeeEEEecCCC-CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------
Q 000463 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------- 708 (1479)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 708 (1479)
++++|++..|.... ..++|+++||+|++||+++|+||+||||||||++|.|...|++|.|.++|
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999886432 24789999999999999999999999999999999999999999999998
Q ss_pred --eEEEEeccCc-CCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHh
Q 000463 709 --TTAYVAQTSW-IQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1479)
Q Consensus 709 --~iayv~Q~~~-i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 785 (1479)
++|||+|+.. +++.|++|||.++..+......+. ....+.-++.+..++. ....++.+|||||||||||||||+
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~--~~~~~~l~~~lgl~~~-~~~~~p~eLSGGqqQRVAIARAL~ 158 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRR--KRAAEELLEVLGLEDR-LLKKKPSELSGGQQQRVAIARALI 158 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHH--HHHHHHHHHhcCChhh-hccCCchhcCHHHHHHHHHHHHHh
Confidence 2899999965 578899999996433222111100 1111122233332221 223568899999999999999999
Q ss_pred cCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccccCCEEEEEeCCEEE
Q 000463 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHNVDLILVMREGMIV 847 (1479)
Q Consensus 786 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~~D~i~~l~~G~i~ 847 (1479)
.+|+++|.||||.+||.++++.+++.+.+...+ |+|+|+||||.+....|||++.|+||++.
T Consensus 159 ~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 159 NNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred cCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 999999999999999999999999877666544 89999999999999999999999999954
No 145
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=9.6e-40 Score=377.24 Aligned_cols=211 Identities=31% Similarity=0.432 Sum_probs=175.7
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EE
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TA 711 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------ia 711 (1479)
..++++|++++|+ +..+++|+||+|++||+++++|||||||||||++|+|+..|++|+|.++|+ ++
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig 80 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIG 80 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccc
Confidence 4799999999996 468999999999999999999999999999999999999999999999994 79
Q ss_pred EEeccCcCC-CCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 712 YVAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 712 yv~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
+|+|+.-+| +.||+|||.||.......-++.++ ....+-++.....+ .-.+++.+|||||||||||||||..+|++
T Consensus 81 ~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~-~rv~e~L~lV~L~~--~~~R~p~qLSGGQqQRVALARAL~~~P~v 157 (352)
T COG3842 81 MVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIK-ARVEEALELVGLEG--FADRKPHQLSGGQQQRVALARALVPEPKV 157 (352)
T ss_pred eeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHH-HHHHHHHHHcCchh--hhhhChhhhChHHHHHHHHHHHhhcCcch
Confidence 999997765 789999999998732211111110 01122233332222 33578899999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccc-ccCCEEEEEeCCEEEEecChHHHHhcC
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFL-HNVDLILVMREGMIVQSGRYNALLNSG 859 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l-~~~D~i~~l~~G~i~~~g~~~~l~~~~ 859 (1479)
+|||||+||||.+.++++-.++.+...+ |.|.|+||||.++. ..+|||++|++|+|.+.|+++|+....
T Consensus 158 LLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 158 LLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred hhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 9999999999999999998887766544 99999999999874 568999999999999999999998653
No 146
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-39 Score=378.85 Aligned_cols=206 Identities=26% Similarity=0.360 Sum_probs=173.6
Q ss_pred CCccEEEEeeeeeecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCC----
Q 000463 1264 AHGNVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLL---- 1336 (1479)
Q Consensus 1264 ~~g~I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i---- 1336 (1479)
....|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 334699999999997432 3599999999999999999999999999999999999999999999999998653
Q ss_pred ------------ChhhhhcceEEEcCcc--ccccccHhhhcCCCC---CCCHHH----HHHHHHHcCchHHHHhCcCCcc
Q 000463 1337 ------------GLHDLRSRFGIIPQEP--VLFEGTVRSNIDPIG---QYSDEE----IWKSLERCQLKDVVAAKPDKLD 1395 (1479)
Q Consensus 1337 ------------~l~~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sd~e----I~~aL~~~~L~~~i~~lp~gLd 1395 (1479)
+...+|+++++++|+| .+|++|+++|+.... ..++++ +.++++.+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------- 167 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD---------- 167 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh----------
Confidence 3567899999999998 689999999996321 223333 344455555431
Q ss_pred ccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhh-hcCEEE
Q 000463 1396 SLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVM-DCDRVI 1473 (1479)
Q Consensus 1396 t~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~-~~DrIl 1473 (1479)
......+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||+
T Consensus 168 ~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~ 247 (320)
T PRK13631 168 SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVI 247 (320)
T ss_pred hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEE
Confidence 22344567899999999999999999999999999999999999999999998753 5789999999999885 499999
Q ss_pred EEeCCC
Q 000463 1474 VVDAGL 1479 (1479)
Q Consensus 1474 VL~~G~ 1479 (1479)
||++|+
T Consensus 248 vl~~G~ 253 (320)
T PRK13631 248 VMDKGK 253 (320)
T ss_pred EEECCE
Confidence 999995
No 147
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.3e-39 Score=361.34 Aligned_cols=201 Identities=31% Similarity=0.471 Sum_probs=174.8
Q ss_pred EEEEeeeeeecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh----h
Q 000463 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD----L 1341 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~----L 1341 (1479)
++++|++++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999997531 45999999999999999999999999999999999999999999999999998876433 4
Q ss_pred hcceEEEcCccccccc-cHhhhcCCC---CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHH
Q 000463 1342 RSRFGIIPQEPVLFEG-TVRSNIDPI---GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1479)
Q Consensus 1342 R~~i~iIpQdp~LF~g-TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1413 (1479)
|++++++||+|.+|.+ |+++|+... ... .++++.++++..++.+.....| .+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYP-----------SELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcCh-----------hhcCHHHHHHH
Confidence 6789999999999987 999999632 111 2356778888888866554333 46899999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1414 ~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
+|||||+++|+||||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+..||+|++|++|+
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~ 217 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGK 217 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCc
Confidence 999999999999999999999999999999999998754 789999999999988899999999996
No 148
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.4e-39 Score=342.30 Aligned_cols=212 Identities=31% Similarity=0.429 Sum_probs=170.2
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1479)
+..|++++++++|. ++.+++||||+|++||+++|+||+||||||||++|+|+++|++|+|.++|
T Consensus 6 ~~~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ 82 (263)
T COG1127 6 EPLIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYE 82 (263)
T ss_pred cceEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHH
Confidence 45899999999995 56899999999999999999999999999999999999999999999998
Q ss_pred ---eEEEEeccCcCCC-CcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccc-cccCCCccchHHHHHHHHHHH
Q 000463 709 ---TTAYVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTE-IGERGINLSGGQKQRIQLARA 783 (1479)
Q Consensus 709 ---~iayv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~-ig~~g~~LSGGQkqRv~LARA 783 (1479)
++|+++|+.-+|+ .||+|||.|...-....-++.++.-.+. .++.. |.... ....+.+||||+++|++||||
T Consensus 83 ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~-KL~~V--GL~~~~~~~~PsELSGGM~KRvaLARA 159 (263)
T COG1127 83 IRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLM-KLELV--GLRGAAADLYPSELSGGMRKRVALARA 159 (263)
T ss_pred HHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHH-HHHhc--CCChhhhhhCchhhcchHHHHHHHHHH
Confidence 3799999998885 6999999996432111111122211111 12221 11111 123567899999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-C-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhcCc
Q 000463 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-K-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGM 860 (1479)
Q Consensus 784 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~ 860 (1479)
+..||+++++|||||+|||.++..+- +++..+. . |-|+|+||||++.+.. ||+|+++.||+|+..|+++|+.+.+.
T Consensus 160 ialdPell~~DEPtsGLDPI~a~~~~-~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~sd~ 238 (263)
T COG1127 160 IALDPELLFLDEPTSGLDPISAGVID-ELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLASDD 238 (263)
T ss_pred HhcCCCEEEecCCCCCCCcchHHHHH-HHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhCCC
Confidence 99999999999999999999987664 5554433 3 8999999999998865 79999999999999999999987543
No 149
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-39 Score=364.31 Aligned_cols=199 Identities=33% Similarity=0.504 Sum_probs=174.5
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCCh---hhhhcc
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL---HDLRSR 1344 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l---~~LR~~ 1344 (1479)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 578999999963 359999999999999999999999999999999999999999999999999987764 567889
Q ss_pred eEEEcCccccccc-cHhhhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHH
Q 000463 1345 FGIIPQEPVLFEG-TVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCL 1415 (1479)
Q Consensus 1345 i~iIpQdp~LF~g-TIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1415 (1479)
++++||+|.+|.+ |+++|+... ...+ ++++.++++.+++.+.....+ .+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~i 147 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYP-----------AELSGGMKKRVAL 147 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHH
Confidence 9999999999986 999999632 1123 345677888888876554333 3689999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1416 GRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1416 ARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||||++|++|+
T Consensus 148 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~ 214 (235)
T cd03261 148 ARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGK 214 (235)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCe
Confidence 9999999999999999999999999999999998653 7899999999999887 99999999985
No 150
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4e-39 Score=358.83 Aligned_cols=200 Identities=31% Similarity=0.518 Sum_probs=175.2
Q ss_pred EEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEE
Q 000463 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGII 1348 (1479)
Q Consensus 1269 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iI 1348 (1479)
+++|++++|+.+...+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++++
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 46899999975334699999999999999999999999999999999999999999999999999888888889999999
Q ss_pred cCcc--ccccccHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1349 PQEP--VLFEGTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1349 pQdp--~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
||+| .++..|+++|+... ...+ ++++.++++..++.+.....+ .+||||||||++|||||
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~laral 149 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSP-----------FTLSGGQKQRVAIAGVL 149 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9998 36788999999642 1122 345677888888876554433 46899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~-~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|+
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 150 AMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999998753 7899999999999988 99999999996
No 151
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.3e-38 Score=362.82 Aligned_cols=214 Identities=43% Similarity=0.705 Sum_probs=192.3
Q ss_pred CCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCeEEEEeccCcCC
Q 000463 641 DNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGTTAYVAQTSWIQ 720 (1479)
Q Consensus 641 ~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~iayv~Q~~~i~ 720 (1479)
....|+++|+++.+ +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++|++|+++++
T Consensus 36 ~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g~i~yv~q~~~l~ 110 (282)
T cd03291 36 DDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSGRISFSSQFSWIM 110 (282)
T ss_pred CCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEEEEeCccccc
Confidence 45679999999962 4699999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCC
Q 000463 721 NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAV 800 (1479)
Q Consensus 721 ~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saL 800 (1479)
+.|++||+.++......++.+.++++.+.+.+..++.+.++.+++++.+||||||||++||||++.+|+++||||||++|
T Consensus 111 ~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gL 190 (282)
T cd03291 111 PGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYL 190 (282)
T ss_pred ccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccC
Confidence 89999999997654444556667777888888888888888888899999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcC
Q 000463 801 DAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSG 859 (1479)
Q Consensus 801 D~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~ 859 (1479)
|+.+.+.+.+.+++...+++|+|++||+++++..||++++|++|++++.|+.+++.+..
T Consensus 191 D~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 249 (282)
T cd03291 191 DVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLR 249 (282)
T ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcc
Confidence 99999988876655555689999999999998889999999999999999999887543
No 152
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4.8e-39 Score=359.01 Aligned_cols=200 Identities=27% Similarity=0.441 Sum_probs=176.7
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChh---hhhcc
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH---DLRSR 1344 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR~~ 1344 (1479)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+..++.. .+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 6899999999533 4599999999999999999999999999999999999999999999999999887643 46789
Q ss_pred eEEEcCcccccc-ccHhhhcCCC----C---CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1345 FGIIPQEPVLFE-GTVRSNIDPI----G---QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1345 i~iIpQdp~LF~-gTIR~NLdp~----~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
++++||+|.+|. .|+++|+... + ...+++++++++..++.+.....| .+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~la 149 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAIA 149 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999986 5999999632 1 112467889999999987655544 36899999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||+++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|+
T Consensus 150 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 150 RAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999864 47999999999999987 99999999996
No 153
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-39 Score=342.77 Aligned_cols=210 Identities=30% Similarity=0.432 Sum_probs=173.1
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 708 (1479)
..|+++|++..|+ +++.+|+||||+|++||+++|+|++||||||||++|.|..+|++|+|.++|
T Consensus 2 ~~i~~~nl~k~yp--~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~ 79 (258)
T COG3638 2 MMIEVKNLSKTYP--GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKL 79 (258)
T ss_pred ceEEEeeeeeecC--CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHH
Confidence 3689999999997 356899999999999999999999999999999999999999999999988
Q ss_pred --eEEEEeccCcC-CCCcHHHHHhcCCCCChhhHHHHH------HHhchHHHHHhcccCCccccccCCCccchHHHHHHH
Q 000463 709 --TTAYVAQTSWI-QNGTIEENILFGLPMNRAKYGEVV------RVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 779 (1479)
Q Consensus 709 --~iayv~Q~~~i-~~~Tv~enI~fg~~~~~~~~~~v~------~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 779 (1479)
++||++|++.+ +..||.+|++.|+--...+++... +.....+.++.+...+ ..-.+..+|||||+|||+
T Consensus 80 r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~--~A~qra~~LSGGQQQRVa 157 (258)
T COG3638 80 RRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILD--KAYQRASTLSGGQQQRVA 157 (258)
T ss_pred HHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHH--HHHHHhccCCcchhHHHH
Confidence 38999999876 678999999988643322222111 0000111233332222 233577899999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHH
Q 000463 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALL 856 (1479)
Q Consensus 780 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~ 856 (1479)
|||||+++|+++|-|||+++|||.+++++++.+.+... .|.|+|+.-|+++... +||||+-|++|+|++.|+.+|+.
T Consensus 158 IARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~ 236 (258)
T COG3638 158 IARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELT 236 (258)
T ss_pred HHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhh
Confidence 99999999999999999999999999999988776654 5899999999999975 59999999999999999998854
No 154
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-39 Score=356.95 Aligned_cols=201 Identities=31% Similarity=0.532 Sum_probs=183.4
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecC-CCChhhhhcce
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDIS-LLGLHDLRSRF 1345 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~-~i~l~~LR~~i 1345 (1479)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 58899999999887 67999999999999999999999999999999999999999999999999998 48899999999
Q ss_pred EEEcCcc--ccccccHhhhcCCCC---CCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1346 GIIPQEP--VLFEGTVRSNIDPIG---QYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1346 ~iIpQdp--~LF~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
|+|.|+| .+|..||.+.+.... ..+. +.+.++|+.+++.++....| .+||||||||++||
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaIA 150 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAIA 150 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHhh
Confidence 9999999 799999999997432 2344 45788999999998855554 36899999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCC--cEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAA--CTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~--~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
.+|..+|+|||||||||+||+...+.+.+.+++..++ .|+|+|||+++.+.+ |||++||++|+
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~ 216 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGK 216 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCE
Confidence 9999999999999999999999999999999997654 699999999999998 99999999985
No 155
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.8e-39 Score=355.24 Aligned_cols=196 Identities=27% Similarity=0.452 Sum_probs=172.9
Q ss_pred EEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEE
Q 000463 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGII 1348 (1479)
Q Consensus 1269 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iI 1348 (1479)
+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...|++++++
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 368999999642 459999999999999999999999999999999999999999999999999864 4567889999
Q ss_pred cCcc--ccccccHhhhcCCCC---CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCC
Q 000463 1349 PQEP--VLFEGTVRSNIDPIG---QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1479)
Q Consensus 1349 pQdp--~LF~gTIR~NLdp~~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1423 (1479)
||+| .+|..|+++|+.... ...++++.++++.+++.++....|. .||||||||++|||||+++|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHPL-----------SLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCch-----------hCCHHHHHHHHHHHHHHhCC
Confidence 9998 467889999996421 1234678999999999877655543 58999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1424 RLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1424 ~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
++|+|||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~ 203 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGA 203 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999863 57899999999999986 99999999995
No 156
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-39 Score=337.35 Aligned_cols=205 Identities=30% Similarity=0.440 Sum_probs=173.2
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCC-----cEEEECCe--------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKIS-----GKVKVCGT-------- 709 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~-----G~i~~~g~-------- 709 (1479)
..++++|+++.|. ++.+|+|||++|++++++|++||+||||||||+++.+..+... |+|.++|+
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 5789999999996 4579999999999999999999999999999999999887665 89999883
Q ss_pred -------EEEEeccCcCCCCcHHHHHhcCCCCCh---hhHHHH----HHHhchHHHHHhcccCCccccccCCCccchHHH
Q 000463 710 -------TAYVAQTSWIQNGTIEENILFGLPMNR---AKYGEV----VRVCCLEKDLEMMEYGDQTEIGERGINLSGGQK 775 (1479)
Q Consensus 710 -------iayv~Q~~~i~~~Tv~enI~fg~~~~~---~~~~~v----~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 775 (1479)
+|+|+|.|.-|..||+|||.+|..... +..+++ ++..+|.+... | .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVK-----D--rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVK-----D--RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhH-----H--HhhCCccCCChhHH
Confidence 799999999999999999999965432 222233 33333332221 1 24567889999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHH
Q 000463 776 QRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNA 854 (1479)
Q Consensus 776 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~ 854 (1479)
||++||||+.-+|+|+|||||||||||.+..+| ++++..++++-|+|+|||+++...+ .|+...+.+|+++|.|+.++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kI-EeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKI-EELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHH-HHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 999999999999999999999999999999988 5677777788999999999998776 69999999999999999988
Q ss_pred HHhc
Q 000463 855 LLNS 858 (1479)
Q Consensus 855 l~~~ 858 (1479)
+..+
T Consensus 235 iF~~ 238 (253)
T COG1117 235 IFTN 238 (253)
T ss_pred hhcC
Confidence 8754
No 157
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.7e-38 Score=351.76 Aligned_cols=201 Identities=60% Similarity=0.983 Sum_probs=181.4
Q ss_pred EEEEeeEEEecCCCC--cccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCeEEEEeccCcCCCC
Q 000463 645 VEVRDGVFSWDDENG--EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGTTAYVAQTSWIQNG 722 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~--~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~iayv~Q~~~i~~~ 722 (1479)
++++|+++.|++... +++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|+++|++|+|.+++.
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~~ 80 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQNG 80 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhccC
Confidence 468999999964211 369999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCCh
Q 000463 723 TIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDA 802 (1479)
Q Consensus 723 Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~ 802 (1479)
|++||+.++...+.++..+..+.+++.+.+..+|.|.++.+++++.+||||||||++||||++++|+++||||||++||+
T Consensus 81 t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~ 160 (204)
T cd03250 81 TIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDA 160 (204)
T ss_pred cHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCH
Confidence 99999999866665566677778888888999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhh-hcCCcEEEEEccCCcccccCCEEEEEeCCE
Q 000463 803 HTGSDIFKECVRG-ALKGKTIILVTHQVDFLHNVDLILVMREGM 845 (1479)
Q Consensus 803 ~~~~~i~~~~~~~-~~~~~tvilvTH~~~~l~~~D~i~~l~~G~ 845 (1479)
+..+.+++.++.. ..+|+|+|++||+++.+..+|++++|++|+
T Consensus 161 ~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 161 HVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999998766543 345899999999999988899999999985
No 158
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=9e-39 Score=356.81 Aligned_cols=200 Identities=28% Similarity=0.427 Sum_probs=175.2
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCCh---hhhhcc
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL---HDLRSR 1344 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l---~~LR~~ 1344 (1479)
++++|++++|+.+ +.+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 459999999999999999999999999999999999999999999999999987754 347889
Q ss_pred eEEEcCccccccc-cHhhhcCCC---CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1345 FGIIPQEPVLFEG-TVRSNIDPI---GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1345 i~iIpQdp~LF~g-TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
++++||+|.+|.+ |+++|+... ... .++++.++++.+++.+.....| .+||+|||||++||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la 148 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP-----------AELSGGEQQRVAIA 148 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhcCHHHHHHHHHH
Confidence 9999999999985 999999632 112 2346788888888876655443 36899999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||+++|+||||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|+
T Consensus 149 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~ 213 (214)
T cd03292 149 RAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGK 213 (214)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCc
Confidence 99999999999999999999999999999999863 47999999999999987 99999999996
No 159
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=363.71 Aligned_cols=204 Identities=24% Similarity=0.383 Sum_probs=180.4
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC---CCccEEEEcCEecCCCChhhhhc
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE---PSGGRIIIDGIDISLLGLHDLRS 1343 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~---p~~G~I~IDG~dI~~i~l~~LR~ 1343 (1479)
.|+++|++++|+. +++|+|+||++++||.+||+|+||||||||+++|.|+++ |++|+|.+||.|+...+....|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 4789999999963 459999999999999999999999999999999999985 69999999999999888888899
Q ss_pred ceEEEcCccccccccHhhhcCCCC---C------CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1344 RFGIIPQEPVLFEGTVRSNIDPIG---Q------YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1344 ~i~iIpQdp~LF~gTIR~NLdp~~---~------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
+++|+||+|.+|..|+++|+.... . ..++++.++++.+++.+++..+ ..+.+.+||+|||||++
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDK-------LKQNALALSGGQQQRLC 152 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHH-------hcCCcccCCHHHHHHHH
Confidence 999999999999999999996421 1 1234678889999987655432 23345689999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||+++|+||+|||||++||..+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|+
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~ 218 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGE 218 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCE
Confidence 999999999999999999999999999999999987778999999999999876 99999999985
No 160
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.6e-38 Score=342.41 Aligned_cols=171 Identities=36% Similarity=0.632 Sum_probs=162.0
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+++|++++|+....++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.+.+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999999998899999999
Q ss_pred EcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEE
Q 000463 1348 IPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1479)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILi 1427 (1479)
++|+|.+|++|+++|+ ||+|||||++||||++++|++||
T Consensus 81 ~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~ll 119 (173)
T cd03246 81 LPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRILV 119 (173)
T ss_pred ECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 89999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1428 MDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1428 LDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||||++||+.+.+.+.+.|++.. +++|+|+++|+++.+..||+|++|++|+
T Consensus 120 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~ 172 (173)
T cd03246 120 LDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGR 172 (173)
T ss_pred EECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCC
Confidence 999999999999999999998864 4789999999999998899999999996
No 161
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.6e-38 Score=357.51 Aligned_cols=218 Identities=32% Similarity=0.471 Sum_probs=187.1
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TTA 711 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ia 711 (1479)
|+++|+++.|+.. .+++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4689999999632 35799999999999999999999999999999999999999999999987 279
Q ss_pred EEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 712 YVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 712 yv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
|++|++++++.|++||+.++.+ .......+..+...+.+.++.++.|..+..++++.+|||||||||+||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 9999999999999999998653 222233334444566666777877877778889999999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcchHH
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGA 864 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~ 864 (1479)
+||||||++||+.+.+.+.+.+.+. .+|+|+|++||+++++..||++++|++|++++.|+++++.+..+.+..
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~-~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~ 232 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDI-CAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAY 232 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHh-cCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHH
Confidence 9999999999999999998765544 468999999999999988999999999999999999998776554443
No 162
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-39 Score=356.41 Aligned_cols=197 Identities=28% Similarity=0.449 Sum_probs=172.1
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ..++++++
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEEE
Confidence 478999999964 45999999999999999999999999999999999999999999999999997654 35778999
Q ss_pred EcCcccccc-ccHhhhcCCC-C--CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFE-GTVRSNIDPI-G--QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp~-~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||+|.+|. .|+++|+... . ..+ ++++.++++..++.+.....| .+||||||||++|||||
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~al 145 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYP-----------HELSGGQQQRVALARAL 145 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHHHHHHHH
Confidence 999998886 5999999632 1 112 345778888888877655443 36899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|++|+
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~ 208 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGR 208 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999998643 7899999999999876 99999999985
No 163
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=368.95 Aligned_cols=202 Identities=27% Similarity=0.462 Sum_probs=180.0
Q ss_pred cEEEEeeeeeecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1267 NVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
.++++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743 34599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcCcc--ccccccHhhhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1346 GIIPQEP--VLFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1346 ~iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
+++||+| .++..||++||.... ..+ ++++.++++.+++.++....| .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 356779999996321 123 356788999999987766554 36899999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||||++|++|+
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~ 217 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQ 217 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999998753 789999999999997899999999995
No 164
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2e-38 Score=355.81 Aligned_cols=201 Identities=29% Similarity=0.471 Sum_probs=173.9
Q ss_pred EEEEeeeeeecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhh---h
Q 000463 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL---R 1342 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L---R 1342 (1479)
++++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+..+. |
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996432 359999999999999999999999999999999999999999999999999988876543 4
Q ss_pred -cceEEEcCcccccc-ccHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHH
Q 000463 1343 -SRFGIIPQEPVLFE-GTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1479)
Q Consensus 1343 -~~i~iIpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1413 (1479)
++++++||+|.+|. .|+++|+... ...+ ++++.++++..++.+.....| ..||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRP-----------SELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHH
Confidence 67999999999986 5999999631 1222 345677888887765544333 46899999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1414 ~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
+||||++++|+||||||||++||.++.+.+.+.|++.. .++|+|+|+|+++.+..||+|++|++|+
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~ 218 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQ 218 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCE
Confidence 99999999999999999999999999999999999864 3789999999999998899999999985
No 165
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=368.05 Aligned_cols=201 Identities=25% Similarity=0.435 Sum_probs=179.9
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
-|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.+.+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999643 35999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEcCcc--ccccccHhhhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1347 IIPQEP--VLFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1347 iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
++||+| .+|..|+++|+.... ..+ ++++.++++.+++.+.....|. .||||||||++|||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----------~LSgG~~qrv~lar 151 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPPY-----------HLSYGQKKRVAIAG 151 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCChh-----------hCCHHHHHHHHHHH
Confidence 999998 688899999996321 122 3567889999999877666553 58999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||+++|++|||||||++||+.+...+.+.|++.. +++|||++||+++.+.. ||||++|++|+
T Consensus 152 aL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~ 215 (274)
T PRK13647 152 VLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGR 215 (274)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999874 47899999999999865 99999999995
No 166
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.3e-38 Score=344.75 Aligned_cols=173 Identities=33% Similarity=0.604 Sum_probs=162.1
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+++|++++|+...+++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|+++++
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999975434699999999999999999999999999999999999999999999999998776 6678899999
Q ss_pred EcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEE
Q 000463 1348 IPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1479)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILi 1427 (1479)
+||+|.+|+.|+++|+ ..+||+|||||++||||++++|++||
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 34799999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1428 MDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1428 LDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||||++||..+.+.+.+.|++..+++|+|+++|+++.+..|||+++|++|+
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 173 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGK 173 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 9999999999999999999998877899999999999998899999999985
No 167
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=338.99 Aligned_cols=201 Identities=28% Similarity=0.503 Sum_probs=180.0
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCC---hhhhhc
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG---LHDLRS 1343 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~---l~~LR~ 1343 (1479)
.|+++||+.+|+.+ ..+|+||||+|++||.|||+|+||||||||+++|.|+.+|++|+|.++|.++..+. ++++|+
T Consensus 3 ~i~~~nl~k~yp~~-~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPGG-HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCCC-ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 58999999999844 56999999999999999999999999999999999999999999999999999987 677889
Q ss_pred ceEEEcCccccccc-cHhhhcCC------------CCCCC---HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCc
Q 000463 1344 RFGIIPQEPVLFEG-TVRSNIDP------------IGQYS---DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSV 1407 (1479)
Q Consensus 1344 ~i~iIpQdp~LF~g-TIR~NLdp------------~~~~s---d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1407 (1479)
++|+|+|.+.|-.. |+-+|+.. |+-++ ..+..+||+++|+.+..-.. .++|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qr-----------a~~LSG 150 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQR-----------ASTLSG 150 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHH-----------hccCCc
Confidence 99999999998765 99999841 23333 35578899999998876543 346899
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1408 GQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1408 GQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||+||++|||||.++|+|++-|||+|+||+++.+.|++.|++.. .|.|||+.-|.++..++ ||||+-|++|+
T Consensus 151 GQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ 225 (258)
T COG3638 151 GQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGR 225 (258)
T ss_pred chhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCc
Confidence 99999999999999999999999999999999999999999865 47899999999999987 99999999996
No 168
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-38 Score=358.73 Aligned_cols=202 Identities=26% Similarity=0.420 Sum_probs=176.0
Q ss_pred cEEEEeeeeeecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh---h
Q 000463 1267 NVDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---L 1341 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---L 1341 (1479)
-++++||+++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.++ +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997532 46999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cceEEEcCccccccc-cHhhhcCC---CCCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHH
Q 000463 1342 R-SRFGIIPQEPVLFEG-TVRSNIDP---IGQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1479)
Q Consensus 1342 R-~~i~iIpQdp~LF~g-TIR~NLdp---~~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1412 (1479)
| ++++++||+|.+|.+ |+++|+.. +...+ ++++.++++..++.+..... ..+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHR-----------PSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHH
Confidence 3 679999999999876 99999853 11222 34577888888886654433 34699999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1413 l~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
++||||++++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+..+|++++|++|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~ 222 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGR 222 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCE
Confidence 999999999999999999999999999999999999864 4789999999999999999999999985
No 169
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-36 Score=333.12 Aligned_cols=466 Identities=21% Similarity=0.284 Sum_probs=336.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceecccCchhhHHHHhchhhHhhhhhHHHHHH
Q 000463 988 LFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGI 1067 (1479)
Q Consensus 988 ~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~~~~ 1067 (1479)
.++.-|+++..+..+...+........|...-.+++.++.++++.+|+.-+++-..++++.++++|+..|. +-...+..
T Consensus 49 ~~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~IS-f~~s~lp~ 127 (546)
T COG4615 49 LVLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNIS-FAFSRLPE 127 (546)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhccccccee-ehHhhhHH
Confidence 44555566666666777777888889999999999999999999999999999999999999999999998 33334455
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcHHHHHHhCcHHH
Q 000463 1068 TVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTT 1147 (1479)
Q Consensus 1068 ~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~ 1147 (1479)
+.+..+.++++.+..++.+|+++.+.+..+++.++.+...++..-+-.+...++...++.+++-.++|.+..+..+...+
T Consensus 128 ~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~ 207 (546)
T COG4615 128 LVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAE 207 (546)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHH
Confidence 67777888899999999999987766555554444333222222222222333455688899999999999988765443
Q ss_pred HHHHHHH------HHHHHhhhHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCcChhHHHHHHHHH---HHHHHH
Q 000463 1148 FYQENVN------RVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYG---LSLNGV 1218 (1479)
Q Consensus 1148 f~~~~~~------~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~vgl~l~y~---~~l~~~ 1218 (1479)
....+.. .-+...+.......+..|-.+.+-.+... .+-+....+.-+.. .+.+++ +-+-++
T Consensus 208 ~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGl------vf~lal~~~w~st~---~a~tivlvlLflr~p 278 (546)
T COG4615 208 YVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGL------VFWLALSLGWASTN---VAATIVLVLLFLRTP 278 (546)
T ss_pred HHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHH------HHHHHHhhccchhh---HHHHHHHHHHHHhhH
Confidence 3322111 11111112222223344444332211111 11111111111111 222233 334567
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCccchhccccCCCCCCCCCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEE
Q 000463 1219 LFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKI 1298 (1479)
Q Consensus 1219 l~~~~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Gekv 1298 (1479)
+..++.....+-...++..||.++...|..+.. ....+.|+| ..||++||.|.|.++. .-+..||++|+.||.|
T Consensus 279 L~s~vgilP~l~~AqvA~~kiakle~~~~~a~~--~~~q~~p~~---~~lelrnvrfay~~~~-FhvgPiNl~ikrGelv 352 (546)
T COG4615 279 LLSAVGILPTLLTAQVAFNKIAKLELAPYKADF--PRPQAFPDW---KTLELRNVRFAYQDNA-FHVGPINLTIKRGELV 352 (546)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHhhcCCccccC--CCCCcCCcc---cceeeeeeeeccCccc-ceecceeeEEecCcEE
Confidence 777888888888999999999988764332211 112223335 4799999999998764 4588999999999999
Q ss_pred EEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccccHhhhcCCCCCCCHHHHHHHH
Q 000463 1299 GVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSL 1378 (1479)
Q Consensus 1299 gIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL 1378 (1479)
=|+|.|||||||++++|.|+|.|++|+|++||.+++.-++++.|+-++-|.-|-+||+.++ -|-+..+.+.|..-|
T Consensus 353 FliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll----~~e~~as~q~i~~~L 428 (546)
T COG4615 353 FLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL----GPEGKASPQLIEKWL 428 (546)
T ss_pred EEECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh----CCccCCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998765 233447888888888
Q ss_pred HHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEE
Q 000463 1379 ERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTI 1456 (1479)
Q Consensus 1379 ~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~Tv 1456 (1479)
++..+.....-..+.+ + -..||-|||.|+++--|++.+.+|+++||=-|.-||.=.+...+.+--.. .|+||
T Consensus 429 qrLel~~ktsl~d~~f-s-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI 502 (546)
T COG4615 429 QRLELAHKTSLNDGRF-S-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTI 502 (546)
T ss_pred HHHHHhhhhcccCCcc-c-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeE
Confidence 8776665443322222 1 12589999999999999999999999999999999999998877654433 59999
Q ss_pred EEEccChhhhhhcCEEEEEeCCC
Q 000463 1457 ISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1457 I~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
+.|+|+-+--..+||++.|++|+
T Consensus 503 ~aIsHDd~YF~~ADrll~~~~G~ 525 (546)
T COG4615 503 FAISHDDHYFIHADRLLEMRNGQ 525 (546)
T ss_pred EEEecCchhhhhHHHHHHHhcCc
Confidence 99999999999999999999996
No 170
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.7e-38 Score=355.52 Aligned_cols=200 Identities=24% Similarity=0.463 Sum_probs=174.8
Q ss_pred EEEEeeeeeecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
++++|++++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...++|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 68999999997432 269999999999999999999999999999999999999999999999999975 456778999
Q ss_pred EEEcCccccccc-cHhhhcCCC---CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1346 GIIPQEPVLFEG-TVRSNIDPI---GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
+++||+|.+|.+ |+++|+... ... .++++.++++..++.+..... ..+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDRR-----------VGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhh-----------hhhcCHHHHHHHHHHH
Confidence 999999999986 999999521 112 235678888888887665433 3468999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++++|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.+ ||||++|++|+
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 213 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGR 213 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 9999999999999999999999999999999864 47899999999999876 99999999995
No 171
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.9e-38 Score=355.81 Aligned_cols=200 Identities=26% Similarity=0.413 Sum_probs=174.4
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++||+++|+.+..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.... .++|+++++
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEE
Confidence 5789999999753345999999999999999999999999999999999999999999999999987643 667889999
Q ss_pred EcCccccc-cccHhhhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLF-EGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF-~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||+|.+| ..|+++|+.... ..+ ++++.++++..++.+..... ..+||+|||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKR-----------ARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhCh-----------hhhCCHHHHHHHHHHHHH
Confidence 99999998 579999995311 122 34577888888886654332 236999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|++|||||||++||+.+.+.+.+.|++..+++|+|+++|+++.+.. ||+|++|++|+
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 9999999999999999999999999999998778999999999999976 99999999985
No 172
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-38 Score=358.10 Aligned_cols=200 Identities=29% Similarity=0.492 Sum_probs=177.4
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+...+..++|++++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEcCccccccccHhhhcCCCC---CCCHHHHHHHHHHcCch-HHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccC
Q 000463 1347 IIPQEPVLFEGTVRSNIDPIG---QYSDEEIWKSLERCQLK-DVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKH 1422 (1479)
Q Consensus 1347 iIpQdp~LF~gTIR~NLdp~~---~~sd~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~ 1422 (1479)
++||+|.+|+.|+++|+.... ...++++.++++..++. +.... ...+||||||||++||||++++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYATR-----------DVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhhC-----------CcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999997422 22345678888888885 33322 3457999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1423 SRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1423 ~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++|||||||++||.++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|+
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~ 209 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGI 209 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCE
Confidence 99999999999999999999999999864 37899999999999886 99999999985
No 173
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-38 Score=368.17 Aligned_cols=202 Identities=34% Similarity=0.530 Sum_probs=174.6
Q ss_pred cEEEEeeeeeecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCC--hhhh
Q 000463 1267 NVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG--LHDL 1341 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~--l~~L 1341 (1479)
.|+++||+++|+... .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++..+ ...+
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 378999999997532 36999999999999999999999999999999999999999999999999998754 4578
Q ss_pred hcceEEEcCcc--ccccccHhhhcCCCC---CCCH----HHHHHHHHHcCch--HHHHhCcCCccccccCCCCCCCchHH
Q 000463 1342 RSRFGIIPQEP--VLFEGTVRSNIDPIG---QYSD----EEIWKSLERCQLK--DVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1342 R~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~--~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
|++++|+||+| .+|+.|+++|+.... ..++ +++.++++.++|. +... .....||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~~~LSgGq~ 150 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKD-----------KSPFELSGGQK 150 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhcc-----------CCcccCCHHHH
Confidence 89999999998 578899999996321 2333 3567888888885 3222 22357999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++|||||+.+|+||||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|+
T Consensus 151 qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~ 222 (287)
T PRK13637 151 RRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGK 222 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999998753 7899999999999865 99999999985
No 174
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-38 Score=360.25 Aligned_cols=200 Identities=31% Similarity=0.507 Sum_probs=173.9
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCC---hhhhhcc
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG---LHDLRSR 1344 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~---l~~LR~~ 1344 (1479)
++++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999642 45999999999999999999999999999999999999999999999999998876 4567889
Q ss_pred eEEEcCcccccc-ccHhhhcCCC------------C---CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCch
Q 000463 1345 FGIIPQEPVLFE-GTVRSNIDPI------------G---QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVG 1408 (1479)
Q Consensus 1345 i~iIpQdp~LF~-gTIR~NLdp~------------~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1408 (1479)
++++||++.+|. .|+++|+... + ...++++.++++..++.+.... ...+||||
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G 148 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQ-----------RADQLSGG 148 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCC-----------CcccCCHH
Confidence 999999998887 6999999521 1 1123457778888877654332 34579999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1409 QRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1409 QrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||++|||||+++|+||||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|+
T Consensus 149 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~ 222 (241)
T cd03256 149 QQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGR 222 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999875 37899999999999985 99999999985
No 175
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-38 Score=361.46 Aligned_cols=206 Identities=27% Similarity=0.419 Sum_probs=178.9
Q ss_pred CccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCccEEEEcCEecCC--CC
Q 000463 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LG 1337 (1479)
Q Consensus 1265 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~ 1337 (1479)
.+.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 467999999999964 359999999999999999999999999999999999986 589999999999863 45
Q ss_pred hhhhhcceEEEcCccccccccHhhhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchH
Q 000463 1338 LHDLRSRFGIIPQEPVLFEGTVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1338 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
...+|++++++||+|.+|..|+++|+... ...+ +++++++++.+++.+.+. ....+...+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHHH
Confidence 66789999999999999999999999632 1222 356788899888854432 12334456899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||++|||||+++|+||||||||++||.++.+.+.+.|++..++.|+|+|||+++.+.. ||||++|++|+
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 232 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGE 232 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999988677899999999999876 99999999985
No 176
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-38 Score=365.38 Aligned_cols=202 Identities=27% Similarity=0.458 Sum_probs=181.1
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.++++||+++|+...+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++|+
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999754456999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcCcc--ccccccHhhhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1347 IIPQEP--VLFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1347 iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
|+||+| .+++.|+++||.... ..+ ++++.++++.++|.+++...|. .||||||||++|||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----------~LS~G~~qrv~lar 153 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREPH-----------RLSGGQKQRVAIAG 153 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCcc-----------cCCHHHHHHHHHHH
Confidence 999998 466789999996421 123 3457888999999887776653 68999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+++|+++.+..||||++|++|+
T Consensus 154 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~ 217 (279)
T PRK13635 154 VLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGE 217 (279)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCE
Confidence 99999999999999999999999999999998764 789999999999998899999999985
No 177
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=8.9e-38 Score=354.57 Aligned_cols=213 Identities=32% Similarity=0.513 Sum_probs=185.4
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TTA 711 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ia 711 (1479)
++++|+++.|++..++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4689999999643335799999999999999999999999999999999999999999999987 289
Q ss_pred EEeccCcCCCCcHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 712 YVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 712 yv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
|++|++.+++.|++||+.++... ..+...+..+.+.+.+.++.++.|.++..+....+|||||||||+||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999998888999999987543 22333445566677777778887887888888999999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhc
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
+||||||++||+++++.+.+.+.... +|+|+|++||+++++..||++++|++|++++.|+.+++...
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 99999999999999999887665544 78999999999999888999999999999999988877653
No 178
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-38 Score=351.32 Aligned_cols=197 Identities=29% Similarity=0.475 Sum_probs=174.7
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+++|++++|+. .++|+|+||++++| ++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 i~~~~~~~~~~~--~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK--KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC--EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 578999999964 35999999999999 99999999999999999999999999999999999998776 778999999
Q ss_pred EcCccccccc-cHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFEG-TVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||+|.+|.+ |+++|+... ...+ ++++.++++.+++.+.....+ .+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKI-----------GSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCch-----------hhCCHHHHHHHHHHHHH
Confidence 9999999986 999998631 1122 356788899999876543322 36999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|++|+|||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|+
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGK 206 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999988777999999999999976 99999999985
No 179
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.4e-38 Score=350.49 Aligned_cols=197 Identities=26% Similarity=0.426 Sum_probs=175.0
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++.+. .++|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 578999999953 4599999999999999999999999999999999999999999999999998764 567889999
Q ss_pred EcCccccc-cccHhhhcCCC---CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCC
Q 000463 1348 IPQEPVLF-EGTVRSNIDPI---GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1479)
Q Consensus 1348 IpQdp~LF-~gTIR~NLdp~---~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1423 (1479)
+||++.+| ..|+++|+... ...+++++.++++..++.+.....+ ..||+|||||++||||++++|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKKV-----------KGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhhH-----------hhCCHHHHHHHHHHHHHhcCC
Confidence 99999887 56999999632 1235778899999999987654432 368999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1424 RLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1424 ~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
++|+|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~ 203 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGK 203 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 9999999999999999999999999865 47899999999999976 99999999995
No 180
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-38 Score=361.88 Aligned_cols=198 Identities=28% Similarity=0.455 Sum_probs=180.8
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.|+++|++.+|.... ||+|+|++|+.||.++|+||||||||||+++|.||.+|++|+|.|||.|++++++++ +.|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 589999999998543 999999999999999999999999999999999999999999999999999998886 7899
Q ss_pred EEcCccccccc-cHhhhcCC-CC--C----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHH
Q 000463 1347 IIPQEPVLFEG-TVRSNIDP-IG--Q----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1479)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp-~~--~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1418 (1479)
+|+|+..||.- ||++||.. .. . --++++.++++..++.+...++|.. ||||||||++||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~~-----------LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPLQ-----------LSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCccc-----------CChhhHHHHHHHHH
Confidence 99999999977 99999973 21 1 2367789999999999999999864 69999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1419 LLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|.++|++++||||.|+||......+...|++..+ +.|+|.|||+-...+. +|||.||++|+
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~ 211 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGR 211 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCe
Confidence 9999999999999999999999999888887553 5899999999999887 99999999995
No 181
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-38 Score=359.93 Aligned_cols=204 Identities=27% Similarity=0.423 Sum_probs=176.8
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCccEEEEcCEecCC--CChh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LGLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1339 (1479)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 359999999999999999999999999999999999975 689999999999875 3455
Q ss_pred hhhcceEEEcCccccccccHhhhcCCC----CC----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI----GQ----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
.+|++++++||++.+|.+|+++|+... +. ..++++.++++.+++.+.+.. .......+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~q 156 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQQ 156 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHHH
Confidence 778999999999999999999999631 11 124567888999888664432 123345689999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||+++|+++.+.. ||||++|++|+
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~ 225 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGK 225 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999987667899999999999976 99999999985
No 182
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-38 Score=374.22 Aligned_cols=201 Identities=32% Similarity=0.507 Sum_probs=175.8
Q ss_pred EEEEeeeeeecC--CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh---hh
Q 000463 1268 VDLIDLQVRYRS--NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---LR 1342 (1479)
Q Consensus 1268 I~~~nvs~~Y~~--~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR 1342 (1479)
|+++|++++|+. ...++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999973 2346999999999999999999999999999999999999999999999999999887654 47
Q ss_pred cceEEEcCcccccc-ccHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1343 SRFGIIPQEPVLFE-GTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1343 ~~i~iIpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
++|+++||++.+|. .|+++|+... ...+ ++++.++++..++.+.....| .+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYP-----------AQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999886 6999999632 1222 245777888888876654433 468999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||+++|+||+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|+
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~ 218 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGR 218 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999998753 7899999999999987 99999999985
No 183
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.3e-38 Score=334.72 Aligned_cols=202 Identities=31% Similarity=0.543 Sum_probs=177.9
Q ss_pred CccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChh---hh
Q 000463 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH---DL 1341 (1479)
Q Consensus 1265 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~L 1341 (1479)
.-.|++++|+++|.. ..|++||||+|++||..||+|+||||||||++++.|+..|++|+|.|+|.||.+++-+ .+
T Consensus 6 ~~~I~vr~v~~~fG~--~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 6 EPLIEVRGVTKSFGD--RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred cceEEEeeeeeecCC--EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 346999999999964 4599999999999999999999999999999999999999999999999999999865 46
Q ss_pred hcceEEEcCccccccc-cHhhhcC-CCCCC---CHHHHH----HHHHHcCchHH-HHhCcCCccccccCCCCCCCchHHH
Q 000463 1342 RSRFGIIPQEPVLFEG-TVRSNID-PIGQY---SDEEIW----KSLERCQLKDV-VAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1342 R~~i~iIpQdp~LF~g-TIR~NLd-p~~~~---sd~eI~----~aL~~~~L~~~-i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
|+++|+++|...||+. ||+||+. |..+| +++++. .-|+.+||... ....| +.||||.|.
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~K 152 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRK 152 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHH
Confidence 9999999999999987 9999996 44444 455443 45778888776 33444 358999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++||||+.-+|+||++|||||+||+-+...+-+.|++.. -+.|+++|||+++++.. ||||+++.+|+
T Consensus 153 RvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gk 223 (263)
T COG1127 153 RVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGK 223 (263)
T ss_pred HHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCE
Confidence 9999999999999999999999999999999988888764 37899999999999988 89999999986
No 184
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=5.2e-38 Score=357.65 Aligned_cols=200 Identities=33% Similarity=0.476 Sum_probs=173.2
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCCh---hhhhcc
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL---HDLRSR 1344 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l---~~LR~~ 1344 (1479)
++++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPNG-KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCCC-cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 6899999999622 459999999999999999999999999999999999999999999999999987654 446889
Q ss_pred eEEEcCcccccc-ccHhhhcCCCC---------------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCch
Q 000463 1345 FGIIPQEPVLFE-GTVRSNIDPIG---------------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVG 1408 (1479)
Q Consensus 1345 i~iIpQdp~LF~-gTIR~NLdp~~---------------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1408 (1479)
++++||++.+|. .|+++|+.... ...++++.++++.+++.+.... ...+||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG 149 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQ-----------RADQLSGG 149 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHH
Confidence 999999998886 59999995210 0123467788888888655433 23579999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1409 QRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1409 QrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||++|||||+++|+||||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.+ ||+|++|++|+
T Consensus 150 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~ 223 (243)
T TIGR02315 150 QQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGE 223 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCE
Confidence 99999999999999999999999999999999999999998743 7899999999999976 99999999985
No 185
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-38 Score=348.00 Aligned_cols=209 Identities=30% Similarity=0.476 Sum_probs=173.5
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1479)
.++++|++|+|++. .++|+|+|+++++||.++|+|+||||||||++.+.|.++|++|.|.++|.
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 57899999999754 68999999999999999999999999999999999999999999998873
Q ss_pred EEEEeccC--cCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 710 TAYVAQTS--WIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 710 iayv~Q~~--~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
+|||+|+| .++..||.|.|.||.......-+++.+ ...+-++.....+ ...+...+|||||||||+||.+|..+
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~--rv~~~l~~vgl~~--~~~r~p~~LSGGqkqRvaIA~vLa~~ 156 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEE--RVAEALELVGLEE--LLDRPPFNLSGGQKQRVAIAGVLAMG 156 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHH--HHHHHHHHcCchh--hccCCccccCCcceeeHHhhHHHHcC
Confidence 89999999 578999999999996532111111100 1112222222222 13467789999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
|+++|||||||+||+..++.+.+.+.+...+ |+|+|++|||++.+.. ||++++|++|+++.+|++.++.+.
T Consensus 157 P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 157 PEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999877666655 7999999999999876 999999999999999999888753
No 186
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.1e-37 Score=349.82 Aligned_cols=200 Identities=26% Similarity=0.411 Sum_probs=173.9
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh---hhcc
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---LRSR 1344 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR~~ 1344 (1479)
|+++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++.+. +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999533 45999999999999999999999999999999999999999999999999998876544 6889
Q ss_pred eEEEcCccccc-cccHhhhcCCC---CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1345 FGIIPQEPVLF-EGTVRSNIDPI---GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1345 i~iIpQdp~LF-~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
++++||+|.+| ..|+++|+... ...++ +++.++++..++.+.....| .+||+|||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la 149 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFP-----------IQLSGGEQQRVGIA 149 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------hhCCHHHHHHHHHH
Confidence 99999999874 66999999632 12232 34677888888876654433 46899999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|+
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 214 (222)
T PRK10908 150 RAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGH 214 (222)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999864 46899999999999987 89999999985
No 187
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=359.56 Aligned_cols=206 Identities=25% Similarity=0.417 Sum_probs=177.2
Q ss_pred CCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCccEEEEcCEecCC--
Q 000463 1263 PAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL-- 1335 (1479)
Q Consensus 1263 p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~-- 1335 (1479)
|....++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++..
T Consensus 9 ~~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~ 86 (269)
T PRK14259 9 SKNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPR 86 (269)
T ss_pred CCCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 34457999999999964 359999999999999999999999999999999999987 689999999999863
Q ss_pred CChhhhhcceEEEcCccccccccHhhhcCCCC---CC---CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchH
Q 000463 1336 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG---QY---SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1336 i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
.+..++|++++++||+|.+|.+|+++|+.... .. .++++.++++.+++.+.+. ........+||+||
T Consensus 87 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 159 (269)
T PRK14259 87 VDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSGGQ 159 (269)
T ss_pred CCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCHHH
Confidence 46677889999999999999999999997432 11 2456777888887754332 12233446799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeC
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDA 1477 (1479)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~ 1477 (1479)
|||++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+|||+++.+.+ ||||++|++
T Consensus 160 ~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~ 228 (269)
T PRK14259 160 QQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNA 228 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEec
Confidence 99999999999999999999999999999999999999988677899999999999976 999999997
No 188
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=4e-38 Score=351.30 Aligned_cols=192 Identities=30% Similarity=0.494 Sum_probs=168.4
Q ss_pred EEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEE
Q 000463 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGII 1348 (1479)
Q Consensus 1269 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iI 1348 (1479)
+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++++
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 36899999964 35999999999999999999999999999999999999999999999998874 578899999
Q ss_pred cCcccc---ccccHhhhcCCCCC-----------CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1349 PQEPVL---FEGTVRSNIDPIGQ-----------YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1349 pQdp~L---F~gTIR~NLdp~~~-----------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
||+|.+ |..|+++|+..... ..++++.++++..++.+.....+ .+||||||||++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~ 142 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----------GELSGGQQQRVL 142 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHH
Confidence 999976 66899999963211 12356888999999877654432 368999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAG 1478 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G 1478 (1479)
|||||+++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|
T Consensus 143 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~ 208 (213)
T cd03235 143 LARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT 208 (213)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc
Confidence 9999999999999999999999999999999999865 57899999999999977 9999999987
No 189
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-38 Score=354.98 Aligned_cols=198 Identities=26% Similarity=0.428 Sum_probs=171.7
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 2 SIEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 3789999999964 459999999999999999999999999999999999999999999999999876543 367899
Q ss_pred EEcCcccccc-ccHhhhcCCCC---CC----C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1347 IIPQEPVLFE-GTVRSNIDPIG---QY----S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1347 iIpQdp~LF~-gTIR~NLdp~~---~~----s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
++||+|.+|. .|+++|+.... .. + ++++.++++..++.+.....+ .+||+|||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----------AQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHHH
Confidence 9999999986 59999996421 11 1 245677788888866554433 468999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~ 214 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGR 214 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 99999999999999999999999999999999998653 7899999999998876 99999999985
No 190
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-38 Score=359.54 Aligned_cols=204 Identities=26% Similarity=0.404 Sum_probs=176.8
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecCC--CChh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISL--LGLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~l~ 1339 (1479)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 7 IIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred eEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 6999999999964 3599999999999999999999999999999999999997 48999999999863 3455
Q ss_pred hhhcceEEEcCccccccccHhhhcCCCC----CC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPIG----QY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~----~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
.+|++++|+||+|.+|..|+++|+.... .. .++++.++++.+++.+.+. +.+|+ ...+|||||||
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~~----~~~~LSgG~~q 157 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK---DKLNT----NALSLSGGQQQ 157 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH---HHHhC----CcccCCHHHHH
Confidence 6788999999999999999999996321 11 2456788888888754432 23444 34679999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++|||||+++|++|||||||++||..+...+.+.|++..+++|+|+|+|+++.+.+ ||||++|++|+
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~ 226 (254)
T PRK14273 158 RLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGC 226 (254)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999998778899999999999876 99999999985
No 191
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-38 Score=352.01 Aligned_cols=196 Identities=27% Similarity=0.403 Sum_probs=171.3
Q ss_pred EEEEeeeeeecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
++++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999997421 469999999999999999999999999999999999999999999999999863 46789
Q ss_pred EEEcCcccccc-ccHhhhcCCC---CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1346 GIIPQEPVLFE-GTVRSNIDPI---GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1346 ~iIpQdp~LF~-gTIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
+++||+|.+|. .|+++|+... ... .++++.+++++.++.+.....+ .+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----------HQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 99999999987 6999999631 111 2456788999999877665554 368999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEe--CCC
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVD--AGL 1479 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~--~G~ 1479 (1479)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+.+ ||+|++|+ +|+
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 9999999999999999999999999999999864 37899999999998876 99999999 685
No 192
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=5.9e-38 Score=349.97 Aligned_cols=199 Identities=31% Similarity=0.518 Sum_probs=173.1
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCC--CChhhhhcce
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL--LGLHDLRSRF 1345 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~--i~l~~LR~~i 1345 (1479)
++++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 478999999964 359999999999999999999999999999999999999999999999999853 3456678999
Q ss_pred EEEcCcccccc-ccHhhhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1346 GIIPQEPVLFE-GTVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1346 ~iIpQdp~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
+++||+|.+|. .|+++|+... ...+ ++++.++++..++.+.....| .+||+|||||++||
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la 147 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYP-----------AQLSGGQQQRVAIA 147 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCc-----------cccCHHHHHHHHHH
Confidence 99999999886 5999999642 1222 235677788887766554443 46899999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++++|++|||||||++||+++.+.+.+.|++.. .++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 148 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~ 212 (213)
T cd03262 148 RALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGR 212 (213)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCc
Confidence 99999999999999999999999999999999864 47899999999999976 99999999996
No 193
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=5.7e-38 Score=355.73 Aligned_cols=199 Identities=30% Similarity=0.499 Sum_probs=170.8
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhh-hcceE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL-RSRFG 1346 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~i~ 1346 (1479)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999963 359999999999999999999999999999999999999999999999999988876664 57799
Q ss_pred EEcCccccccc-cHhhhcCCCC----CC-------------CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCch
Q 000463 1347 IIPQEPVLFEG-TVRSNIDPIG----QY-------------SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVG 1408 (1479)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~~----~~-------------sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1408 (1479)
++||+|.+|.+ |+++|+.... .. .++++.++++..++.+.. ......||||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG 147 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLA-----------DRPAGELSYG 147 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchh-----------hCChhhCCHH
Confidence 99999999987 9999985321 10 123455666666664432 2234579999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1409 QRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1409 QrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 148 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~ 220 (236)
T cd03219 148 QQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGR 220 (236)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999865 57899999999999977 99999999985
No 194
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-37 Score=350.22 Aligned_cols=215 Identities=33% Similarity=0.527 Sum_probs=187.2
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------EE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------TA 711 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------ia 711 (1479)
++++|+++.|++ ++++++|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|. ++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 468899999953 246999999999999999999999999999999999999999999999882 79
Q ss_pred EEeccCcCCCCcHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 712 YVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 712 yv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
|++|++++++.|++||+.++... ......+..+.+.+.+.+..++.|.++.++.++.+||||||||++||||++.+|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987542 22233445666677777888888888888889999999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCcch
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDF 862 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f 862 (1479)
+||||||++||+++.+.+.+.+.+... |+|+|++||+++.+..||++++|++|++++.|+.+++......+
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~ 229 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSK-GRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLY 229 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHH
Confidence 999999999999999999876654444 89999999999999889999999999999999988876644333
No 195
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.9e-37 Score=355.90 Aligned_cols=198 Identities=27% Similarity=0.434 Sum_probs=179.9
Q ss_pred CccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcc
Q 000463 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSR 1344 (1479)
Q Consensus 1265 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~ 1344 (1479)
.+.|+++|++++ + .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~---~-~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLV---G-APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEe---c-ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 456999999996 2 3599999999999999999999999999999999999999999999998 4
Q ss_pred eEEEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCC
Q 000463 1345 FGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1479)
Q Consensus 1345 i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1424 (1479)
++|+||++.+|++|+++|+.......+.++.++++.+++.+.+..+|.++++.+.+.+.+||+|||||++|||||+++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999997543345566778889999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHH-HHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1425 LLFMDEATASVDSQTDAEIQRI-IREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1425 ILiLDEaTs~lD~~Te~~Iq~~-I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||||||||++||+++...+.+. +++..++.|||+|||+++.+..||+|++|++|+
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~ 235 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGS 235 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCE
Confidence 9999999999999999988765 455556899999999999998899999999985
No 196
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-37 Score=349.96 Aligned_cols=214 Identities=35% Similarity=0.542 Sum_probs=186.3
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------EE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------TA 711 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------ia 711 (1479)
|+++|++++|++. ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4689999999632 236999999999999999999999999999999999999999999999872 79
Q ss_pred EEeccCcCCCCcHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 712 YVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 712 yv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
|++|++++++.|++||+.++... ....+.+..+.+.+.+.++.++.|..+..+.++.+||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999989999999987542 33344455566677788888887777788889999999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhcCc
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGM 860 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~ 860 (1479)
+||||||++||+.+.+.+.+.+.+. .+++|+|++||+++.++.||++++|++|++++.|+++++.....
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~-~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~ 228 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERL-MKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGG 228 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHh-cCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCc
Confidence 9999999999999999987655444 46899999999999988899999999999999999988765443
No 197
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=6.5e-38 Score=349.63 Aligned_cols=197 Identities=28% Similarity=0.453 Sum_probs=171.9
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ++++++
T Consensus 1 i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN--VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECC--eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 578999999964 3599999999999999999999999999999999999999999999999999766543 568999
Q ss_pred EcCcccccc-ccHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFE-GTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||++.+|. .|+++|+... ...+ ++++.++++..++.+.....| .+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~laral 145 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKP-----------KQLSGGQRQRVALGRAI 145 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 999999885 5999999642 1122 345677888888877655443 36899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|+||+|||||++||+++.+.+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|+
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~ 208 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQ 208 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCE
Confidence 99999999999999999999999999999864 37899999999999887 99999999985
No 198
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-38 Score=363.87 Aligned_cols=202 Identities=28% Similarity=0.414 Sum_probs=172.2
Q ss_pred cEEEEeeeeeecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCC----Chh
Q 000463 1267 NVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLL----GLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~ 1339 (1479)
.++++|++++|+.+. +++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996432 3599999999999999999999999999999999999999999999999999754 346
Q ss_pred hhhcceEEEcCcc--ccccccHhhhcCCCC---CCCH----HHHHHHHHHcCch-HHHHhCcCCccccccCCCCCCCchH
Q 000463 1340 DLRSRFGIIPQEP--VLFEGTVRSNIDPIG---QYSD----EEIWKSLERCQLK-DVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
.+|++|+++||+| .+|..|+++|+.... ..+. +++.++++.+++. +.. .....+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~~LSgGq 150 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVM-----------SQSPFQMSGGQ 150 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhh-----------hCCcccCCHHH
Confidence 7899999999998 588899999996321 2233 3445666666664 222 23345799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||||++|++|+
T Consensus 151 ~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~ 223 (286)
T PRK13646 151 MRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGS 223 (286)
T ss_pred HHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999864 47999999999999865 99999999985
No 199
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.2e-37 Score=351.16 Aligned_cols=202 Identities=25% Similarity=0.374 Sum_probs=176.9
Q ss_pred cEEEEeeeeeecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh---h
Q 000463 1267 NVDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---L 1341 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---L 1341 (1479)
.|+++|++++|+.+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 589999999997532 25999999999999999999999999999999999999999999999999998877654 2
Q ss_pred -hcceEEEcCccccccc-cHhhhcCC---CCCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHH
Q 000463 1342 -RSRFGIIPQEPVLFEG-TVRSNIDP---IGQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1479)
Q Consensus 1342 -R~~i~iIpQdp~LF~g-TIR~NLdp---~~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1412 (1479)
+++++++||+|.+|.+ |+++|+.. +... ..+++.++++..++.+.....| ..||+|||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHH
Confidence 3679999999999875 99999963 1111 2456788899999987765554 3589999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1413 l~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
++|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+..||+|++|++|+
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~ 223 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQ 223 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999988643 789999999999998899999999985
No 200
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=9.5e-38 Score=350.61 Aligned_cols=200 Identities=26% Similarity=0.457 Sum_probs=168.3
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhh-hcceE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL-RSRFG 1346 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~i~ 1346 (1479)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK--SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC--eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 578999999964 359999999999999999999999999999999999999999999999999988877664 67899
Q ss_pred EEcCccccccc-cHhhhcCCCCC-CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhc
Q 000463 1347 IIPQEPVLFEG-TVRSNIDPIGQ-YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVML 1420 (1479)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~~~-~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL 1420 (1479)
++||++.+|.+ |+++|+..... +. .+++.++++..+ .++..++ ....+||+|||||++||||++
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~------~l~~~~~----~~~~~LS~G~~qrv~laral~ 148 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP------RLKERRK----QLAGTLSGGEQQMLAIARALM 148 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH------hhhhhhh----CchhhCCHHHHHHHHHHHHHh
Confidence 99999999987 99999964221 11 122334444431 1122223 334579999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1421 KHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1421 r~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
++|++|+|||||++||.++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 149 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (222)
T cd03224 149 SRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGR 209 (222)
T ss_pred cCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCe
Confidence 9999999999999999999999999999865 47899999999999877 99999999986
No 201
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-37 Score=359.18 Aligned_cols=202 Identities=29% Similarity=0.485 Sum_probs=177.8
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.++++|++++|+.+.+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 58999999999744456999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcCcc--ccccccHhhhcCCC---CCCCHH----HHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1347 IIPQEP--VLFEGTVRSNIDPI---GQYSDE----EIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1347 iIpQdp--~LF~gTIR~NLdp~---~~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
++||+| .++..|+++|+... ...+++ .+.+++++.++.++....+ .+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lar 155 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEP-----------QNLSGGQKQRVAIAS 155 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 45677999999642 123333 3567788888877665544 478999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||+++|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+..||+|++|++|+
T Consensus 156 al~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~ 219 (271)
T PRK13632 156 VLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGK 219 (271)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCE
Confidence 99999999999999999999999999999998653 489999999999988899999999985
No 202
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=358.90 Aligned_cols=207 Identities=27% Similarity=0.408 Sum_probs=178.8
Q ss_pred CCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecCC--C
Q 000463 1264 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISL--L 1336 (1479)
Q Consensus 1264 ~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i 1336 (1479)
+.+.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 4568999999999964 3599999999999999999999999999999999999975 89999999999875 3
Q ss_pred ChhhhhcceEEEcCccccccccHhhhcCCC---CCC--C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCc
Q 000463 1337 GLHDLRSRFGIIPQEPVLFEGTVRSNIDPI---GQY--S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSV 1407 (1479)
Q Consensus 1337 ~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~--s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1407 (1479)
+...+|++++++||+|.+|.+|+++|+... ... + ++++.++++.+++.+.+.. .......+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKD-------RLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCH
Confidence 456788999999999999999999999631 111 1 3557888999888664431 12234567999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1408 GQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1408 GQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|||+++|+++.+.. ||+|++|++|+
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~ 239 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGN 239 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999987667899999999999976 89999999985
No 203
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-38 Score=353.90 Aligned_cols=201 Identities=33% Similarity=0.534 Sum_probs=175.4
Q ss_pred EEEEeeeeeecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh---hh
Q 000463 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---LR 1342 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR 1342 (1479)
|+++|++++|+... .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+..+ .|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999997431 26999999999999999999999999999999999999999999999999998776543 47
Q ss_pred cceEEEcCcccccc-ccHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1343 SRFGIIPQEPVLFE-GTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1343 ~~i~iIpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
++++++||+|.+|. .|+++|+... ...+ ++++.++++..++.+.....+ .+||+|||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYP-----------AQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcCh-----------hhCCHHHHHHHH
Confidence 88999999999997 5999999531 1122 456788889888876655443 468999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||++++|++|||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~ 218 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGE 218 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999998653 7899999999999876 99999999995
No 204
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-37 Score=348.28 Aligned_cols=211 Identities=32% Similarity=0.509 Sum_probs=185.9
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1479)
.++++|++++|++ .+++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 4789999999952 24699999999999999999999999999999999999999999999987 27
Q ss_pred EEEeccCcCCCCcHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCC
Q 000463 711 AYVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1479)
Q Consensus 711 ayv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 789 (1479)
+|++|+++++..|++||+.++.+. ......+.++.+.+.+.++.++.|..+..+.+..+|||||||||+||||++++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 999999999888999999987543 2334455566677888888888888888888999999999999999999999999
Q ss_pred EEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHh
Q 000463 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 790 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
++||||||++||+.+++.+++.+.+. .+++|+|++||+++.++.||++++|++|++++.|+++++.+
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~-~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKL-MKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHh-cCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999988765544 46899999999999988899999999999999998877654
No 205
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-37 Score=361.81 Aligned_cols=201 Identities=30% Similarity=0.489 Sum_probs=175.3
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecC--CCChhhhhcc
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDIS--LLGLHDLRSR 1344 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~--~i~l~~LR~~ 1344 (1479)
-|+++|++++|+.+ ..+|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+. ..+..++|++
T Consensus 5 ~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 48999999999633 45999999999999999999999999999999999999999999999999984 3446678999
Q ss_pred eEEEcCcc--ccccccHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHH
Q 000463 1345 FGIIPQEP--VLFEGTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCL 1415 (1479)
Q Consensus 1345 i~iIpQdp--~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1415 (1479)
++|+||+| .+|+.|+++|+... ...+ ++.+.++++.+++.++... ...+||+|||||++|
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LS~G~~qrl~l 152 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDK-----------PTHCLSFGQKKRVAI 152 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhC-----------CcccCCHHHHHHHHH
Confidence 99999998 57889999999631 1223 2456777888888765432 245799999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1416 GRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1416 ARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||+.+|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||||++|++|+
T Consensus 153 araL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~ 219 (283)
T PRK13636 153 AGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGR 219 (283)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999998754 7899999999999975 99999999995
No 206
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-37 Score=346.43 Aligned_cols=195 Identities=27% Similarity=0.427 Sum_probs=172.1
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+++|++++|+.. . .|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999642 2 39999999999999999999999999999999999999999999999986653 4678999
Q ss_pred EcCccccccc-cHhhhcCCCC----C---CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFEG-TVRSNIDPIG----Q---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~~----~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||+|.+|.+ |+++|+.... . .+++++.++++.+++.+.....|. +||+|||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLPG-----------ELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCcc-----------cCCHHHHHHHHHHHHH
Confidence 9999999976 9999996321 1 235578899999999877666553 6899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|++|||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||||++|++|+
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~ 206 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGR 206 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCE
Confidence 99999999999999999999999999999875 37899999999999977 99999999995
No 207
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.2e-37 Score=355.39 Aligned_cols=203 Identities=30% Similarity=0.450 Sum_probs=175.9
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCC-----ccEEEEcCEecCCC--Chhh
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS-----GGRIIIDGIDISLL--GLHD 1340 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~-----~G~I~IDG~dI~~i--~l~~ 1340 (1479)
++++|++++|+. ..+++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGE--KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECC--eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 789999999974 34999999999999999999999999999999999999998 99999999999763 4556
Q ss_pred hhcceEEEcCccccccccHhhhcCCC---CC-CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHH
Q 000463 1341 LRSRFGIIPQEPVLFEGTVRSNIDPI---GQ-YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1479)
Q Consensus 1341 LR~~i~iIpQdp~LF~gTIR~NLdp~---~~-~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1412 (1479)
.|++++++||++.+|..|+++|+... .. .+ ++++.++++..++.+.+.. .+ .....+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~----~~~~~~LSgG~~qr 152 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKD---RL----HDSALGLSGGQQQR 152 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhh---Hh----hCCcccCCHHHHHH
Confidence 78899999999999999999999631 11 12 3567888999998744321 11 22345799999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1413 l~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||||++|++|+
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~ 220 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGE 220 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999987767899999999999876 99999999995
No 208
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=369.93 Aligned_cols=199 Identities=26% Similarity=0.426 Sum_probs=176.9
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.++++|++++|+.+ ..+|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++.+++.+ +++|+
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 48999999999533 4599999999999999999999999999999999999999999999999999887765 47899
Q ss_pred EEcCccccccc-cHhhhcCCC-C--CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHH
Q 000463 1347 IIPQEPVLFEG-TVRSNIDPI-G--QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1479)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~-~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1418 (1479)
+|||++.+|.. |+++|+... . ..+ ++++.++++.+++.++..+.|. +||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----------~LSgGq~QRvalARA 148 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKPR-----------ELSGGQRQRVAMGRA 148 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCChh-----------hCCHHHHHHHHHHHH
Confidence 99999999964 999999632 1 223 3567889999999888777663 589999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1419 LLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|+++|+||+||||||+||..+...+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|+
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~ 212 (356)
T PRK11650 149 IVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGV 212 (356)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999998654 6899999999998876 99999999996
No 209
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=7.3e-38 Score=317.80 Aligned_cols=198 Identities=29% Similarity=0.418 Sum_probs=165.0
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EEEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TAYV 713 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------iayv 713 (1479)
+.++++.|+|+... =..+++|++||++||+||+||||||||+.|+|+..|.+|+|.++|. ++++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSml 76 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSML 76 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhh
Confidence 56788999996421 2578999999999999999999999999999999999999999983 7899
Q ss_pred eccCcCCC-CcHHHHHhcCCC----CCh---hhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHh
Q 000463 714 AQTSWIQN-GTIEENILFGLP----MNR---AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1479)
Q Consensus 714 ~Q~~~i~~-~Tv~enI~fg~~----~~~---~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 785 (1479)
+|+..+|. .||++||-+|.. .+. ++.+.+....++...++ +.+.+|||||||||+|||++.
T Consensus 77 FQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~-----------RLP~~LSGGqRQRvALARclv 145 (231)
T COG3840 77 FQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLK-----------RLPGELSGGQRQRVALARCLV 145 (231)
T ss_pred hhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhh-----------hCccccCchHHHHHHHHHHHh
Confidence 99998884 699999999964 222 23333333344444333 345689999999999999999
Q ss_pred cCCCEEEEeCccCCCChhhHHHHHHHHHhhh-cCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGA-LKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 786 ~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
++.+|+|||||||+|||.-+.++...+.+.. .++.|+++|||+++.+.. +|+++++++|+|.++|+.+++...
T Consensus 146 R~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 146 REQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred ccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 9999999999999999999998876555544 358999999999999875 899999999999999999888754
No 210
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-37 Score=362.56 Aligned_cols=201 Identities=25% Similarity=0.403 Sum_probs=173.3
Q ss_pred EEEEeeeeeecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCC----CChhh
Q 000463 1268 VDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL----LGLHD 1340 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~----i~l~~ 1340 (1479)
|+++|++++|+.+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.. .....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997543 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred hhcceEEEcCcc--ccccccHhhhcCCCC---CCC----HHHHHHHHHHcCch-HHHHhCcCCccccccCCCCCCCchHH
Q 000463 1341 LRSRFGIIPQEP--VLFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLK-DVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1341 LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
+|+++++++|+| .+|..|+.+|+.... ..+ ++++.++++.+++. ++... ...+||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEK-----------SPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccC-----------CcccCCHHHH
Confidence 899999999998 789999999996321 123 23467778888884 33332 2347999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|+
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~ 221 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGH 221 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999998764 47899999999998865 99999999995
No 211
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-37 Score=354.85 Aligned_cols=200 Identities=28% Similarity=0.429 Sum_probs=174.7
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999753 459999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EcCcccccc-ccHhhhcCCCC---CCC----HHHHHHHHHHcCchH--HHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1348 IPQEPVLFE-GTVRSNIDPIG---QYS----DEEIWKSLERCQLKD--VVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~--~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
+||+|.+|. .|+++|+.... ..+ ++++.++++..++.+ ... ....+||+|||||++|||
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~-----------~~~~~LS~G~~qrv~lar 148 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFAD-----------RYPHELSGGQQQRVGVAR 148 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHh-----------cChhhCCHHHHHHHHHHH
Confidence 999999986 69999996321 122 345677788887763 322 234579999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++++|++|+|||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|+
T Consensus 149 al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~ 213 (242)
T cd03295 149 ALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGE 213 (242)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999998753 7999999999998876 99999999995
No 212
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-37 Score=357.24 Aligned_cols=204 Identities=30% Similarity=0.418 Sum_probs=175.7
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecC--CCChh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDIS--LLGLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~--~i~l~ 1339 (1479)
.++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 4899999999964 3599999999999999999999999999999999999987 4999999999997 45566
Q ss_pred hhhcceEEEcCccccccc-cHhhhcCCC---CC--CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchH
Q 000463 1340 DLRSRFGIIPQEPVLFEG-TVRSNIDPI---GQ--YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~g-TIR~NLdp~---~~--~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
.+|++++++||+|.+|.+ |+++|+... .. .+ ++++.++++..++.+.+.. .......+|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~ 154 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKD-------RLNDYPSNLSGGQ 154 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhh-------hhccChhhCCHHH
Confidence 788999999999999976 999999631 11 11 2457788888887654321 1223446799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||++|||||+++|++|||||||++||+++.+.+.+.|++..+++|+|+|+|+++.+.. ||||++|++|+
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 225 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGK 225 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999998777999999999999876 99999999985
No 213
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-37 Score=348.16 Aligned_cols=198 Identities=27% Similarity=0.433 Sum_probs=173.6
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++|+++++
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEE
Confidence 578999999964 3599999999999999999999999999999999999999999999999998763 3567889999
Q ss_pred EcCccccccc-cHhhhcCCC---CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFEG-TVRSNIDPI---GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||++.+|.+ |+++|+... ... .++++.++++..++.+.....| .+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLV-----------KTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999998876 999999531 111 2456788899999877654443 36899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+.+|++|||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+.. ||||++|++|+
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999998653 6899999999999887 99999999995
No 214
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-37 Score=355.37 Aligned_cols=204 Identities=32% Similarity=0.469 Sum_probs=177.3
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecCCCChhhh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLLGLHDL 1341 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i~l~~L 1341 (1479)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999964 3599999999999999999999999999999999999974 69999999999998888889
Q ss_pred hcceEEEcCccccc-cccHhhhcCCC---CCC--C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1342 RSRFGIIPQEPVLF-EGTVRSNIDPI---GQY--S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1342 R~~i~iIpQdp~LF-~gTIR~NLdp~---~~~--s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
|++++++||+|.+| +.|+++|+... ... . ++++.++++.+++.+.+. ..+|.. ..+|||||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~----~~~LSgG~~q 153 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK---DRLDAP----AGKLSGGQQQ 153 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh---hhhcCC----cccCCHHHHH
Confidence 99999999999755 67999999631 111 1 356788999998865432 123333 3579999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++|||||+++|+||+|||||++||+.+.+.+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|+
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 222 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQ 222 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCe
Confidence 999999999999999999999999999999999999997778999999999999865 99999999995
No 215
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-37 Score=353.08 Aligned_cols=195 Identities=26% Similarity=0.418 Sum_probs=172.8
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++
T Consensus 12 ~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i~ 84 (257)
T PRK11247 12 PLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDTR 84 (257)
T ss_pred cEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCceE
Confidence 5999999999964 35999999999999999999999999999999999999999999999998763 5688999
Q ss_pred EEcCcccccc-ccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCC
Q 000463 1347 IIPQEPVLFE-GTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1479)
Q Consensus 1347 iIpQdp~LF~-gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1424 (1479)
++||+|.+|. .|+++|+... ....++++.++++..++.+..... ..+||||||||++|||||+++|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRANEW-----------PAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhcCC-----------hhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999987 5999999742 222356788899999887654433 34799999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1425 LLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1425 ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~ 211 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGK 211 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999998864 37899999999999866 99999999985
No 216
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=7e-37 Score=350.74 Aligned_cols=215 Identities=25% Similarity=0.377 Sum_probs=190.1
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1479)
...|+++|++++|++. .+++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 17 ~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 17 GGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 3579999999999642 24699999999999999999999999999999999999999999999987
Q ss_pred eEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCC
Q 000463 709 TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1479)
Q Consensus 709 ~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 788 (1479)
.++|++|+|++++.|++||+............+.++...+.+.++.++.|.++.+++++.+||||||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 37999999999999999999765433344455666777788888889888999999999999999999999999999999
Q ss_pred CEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhc
Q 000463 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 789 ~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
+++||||||++||+++.+.+++.+.+ ..+++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~-~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 244 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMT-AFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQ 244 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHH-hcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhc
Confidence 99999999999999998888765543 4568999999999999888999999999999999999988754
No 217
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-37 Score=332.96 Aligned_cols=171 Identities=42% Similarity=0.748 Sum_probs=162.1
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+...+.+++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 47899999997543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEE
Q 000463 1348 IPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1479)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILi 1427 (1479)
+||+|.+|++|+++|+ ||+|||||++||||++++|++|+
T Consensus 81 ~~~~~~~~~~t~~e~l-----------------------------------------LS~G~~~rl~la~al~~~p~lll 119 (171)
T cd03228 81 VPQDPFLFSGTIRENI-----------------------------------------LSGGQRQRIAIARALLRDPPILI 119 (171)
T ss_pred EcCCchhccchHHHHh-----------------------------------------hCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 89999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1428 MDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1428 LDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||||++||+++.+.+.+.|++..+++|+|+++|+++.+..||++++|++|+
T Consensus 120 lDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 120 LDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 9999999999999999999998877899999999999998899999999996
No 218
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1e-37 Score=316.69 Aligned_cols=195 Identities=26% Similarity=0.437 Sum_probs=173.7
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|.+++|.++|.. .+ =..+++|++||+|||+|+||||||||++++.||..|.+|.|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~-~~---~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGH-LP---MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCc-ce---EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 567899999964 23 256899999999999999999999999999999999999999999999877665 466999
Q ss_pred EcCccccccc-cHhhhcCCC-------CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFEG-TVRSNIDPI-------GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~-------~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
++||..||.- ||++|+... +....+.+..++.++|+.++..++|+. ||||||||++|||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~~-----------LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPGE-----------LSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCccc-----------cCchHHHHHHHHHHH
Confidence 9999999976 999999732 123457799999999999999999964 699999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+|+.+||+||||.|+||+.-.+.+...+.+.. ++.|+++|||.++.+.. +||++++|+||
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gr 207 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGR 207 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCE
Confidence 99999999999999999999999888887754 57899999999999887 99999999996
No 219
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-37 Score=358.58 Aligned_cols=200 Identities=25% Similarity=0.413 Sum_probs=177.7
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++++++
T Consensus 4 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 4 IETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred EEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 7899999999643 349999999999999999999999999999999999999999999999999988778888999999
Q ss_pred EcCcc--ccccccHhhhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHH
Q 000463 1348 IPQEP--VLFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1479)
Q Consensus 1348 IpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1418 (1479)
+||+| .+|..|+++|+.... ..+ ++.+.++++.+++.+.....| ..||+|||||++||||
T Consensus 83 v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~lara 151 (277)
T PRK13652 83 VFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAIAGV 151 (277)
T ss_pred EecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHHHHH
Confidence 99998 478889999996311 223 345788999999987766554 3689999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1419 LLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.+ ||||++|++|+
T Consensus 152 L~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~ 215 (277)
T PRK13652 152 IAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGR 215 (277)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCe
Confidence 9999999999999999999999999999998654 7899999999999965 99999999996
No 220
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-37 Score=356.03 Aligned_cols=205 Identities=27% Similarity=0.405 Sum_probs=178.2
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCccEEEEcCEecCC--CCh
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LGL 1338 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l 1338 (1479)
..|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 36999999999963 459999999999999999999999999999999999997 589999999999864 345
Q ss_pred hhhhcceEEEcCccccccccHhhhcCCC----CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1339 HDLRSRFGIIPQEPVLFEGTVRSNIDPI----GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
..+|++++++||+|.+|.+|+++|+... +.. .++++.++++.+++.+.+.. ........||+|||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~ 169 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKD-------DLHKSALTLSGGQQ 169 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhh-------hhcCCcccCCHHHH
Confidence 6788999999999999999999999632 111 23557788888888655432 23345568999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++||||++++|++|||||||++||+.+...+.+.|++..++.|+|+|+|+++.+.. ||||++|++|+
T Consensus 170 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~ 239 (267)
T PRK14237 170 QRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGD 239 (267)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 9999999999999999999999999999999999999998778999999999999876 99999999985
No 221
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-37 Score=367.66 Aligned_cols=199 Identities=25% Similarity=0.401 Sum_probs=177.0
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
..|+++|++++|.. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++...+.+ ++++
T Consensus 5 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred cEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 36999999999963 4589999999999999999999999999999999999999999999999999877654 5789
Q ss_pred EEEcCccccccc-cHhhhcCCC-C--CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1346 GIIPQEPVLFEG-TVRSNIDPI-G--QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~-~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
++|+|++.+|.. |+++|+... . ..+ ++++.++++..++.++..+.| ..||||||||++|||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----------~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV-----------DQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999976 999999731 1 122 457788999999987765554 368999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||+++|+||+||||||+||..+...+++.|++..+ +.|+|+|||+.+.+.. ||||+||++|+
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~ 214 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGK 214 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999998754 7899999999999876 99999999995
No 222
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-37 Score=357.76 Aligned_cols=203 Identities=27% Similarity=0.447 Sum_probs=180.6
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCc---cEEEEcCEecCCCChhhhh
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSG---GRIIIDGIDISLLGLHDLR 1342 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~---G~I~IDG~dI~~i~l~~LR 1342 (1479)
+.|+++|++++|+....++|+|+||+|++||.+||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999997544459999999999999999999999999999999999999998 8999999999887777889
Q ss_pred cceEEEcCcc--ccccccHhhhcCCC---CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHH
Q 000463 1343 SRFGIIPQEP--VLFEGTVRSNIDPI---GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1479)
Q Consensus 1343 ~~i~iIpQdp--~LF~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1413 (1479)
++++++||+| .+++.|+++||... ...++ +++.++++.+++.++....| .+||+|||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHH
Confidence 9999999998 46788999999632 12333 45788899999987766655 36899999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1414 ~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
+|||||+++|++|||||||++||..+...+.+.|++..+ ++|||++||+++.+..||||++|++|+
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~ 220 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGK 220 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999998753 789999999999998899999999995
No 223
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-37 Score=366.91 Aligned_cols=206 Identities=26% Similarity=0.411 Sum_probs=171.9
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EEE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TAY 712 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------iay 712 (1479)
.++++|++++|+. ++++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. +||
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 80 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAM 80 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 4889999999942 357999999999999999999999999999999999999999999999983 899
Q ss_pred EeccCcCC-CCcHHHHHhcCCCCC---hhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCC
Q 000463 713 VAQTSWIQ-NGTIEENILFGLPMN---RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1479)
Q Consensus 713 v~Q~~~i~-~~Tv~enI~fg~~~~---~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 788 (1479)
|+|++.++ +.||+|||.|+.... ....++ ...+-++.+.. ......++.+|||||||||+|||||+.+|
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~~gL--~~~~~~~~~~LSgGq~QRvalARAL~~~P 153 (356)
T PRK11650 81 VFQNYALYPHMSVRENMAYGLKIRGMPKAEIEE-----RVAEAARILEL--EPLLDRKPRELSGGQRQRVAMGRAIVREP 153 (356)
T ss_pred EeCCccccCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHcCC--hhHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999887 579999999985421 111111 11222333322 22345677899999999999999999999
Q ss_pred CEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000463 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 789 ~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
+++|||||||+||+.+++.+.+.+.+...+ |.|+|+||||++++. .||+|++|++|++++.|+++++.++
T Consensus 154 ~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 154 AVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 999999999999999999998877655544 899999999999875 5999999999999999999998764
No 224
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-37 Score=356.59 Aligned_cols=200 Identities=25% Similarity=0.396 Sum_probs=177.9
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+..++|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999963 35999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcCccccccc-cHhhhcCCCC-----------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1347 IIPQEPVLFEG-TVRSNIDPIG-----------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~~-----------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
++||++.++.+ |+++|+.... ...++++.++++.+++.+.....| .+||||||||++
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~ 157 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQRAW 157 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHHHH
Confidence 99999877665 9999996310 112456888999999977655544 258999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||+.+|+||||||||++||..+.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|+
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~ 225 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGE 225 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 9999999999999999999999999999999999864 27999999999999976 99999999986
No 225
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.9e-37 Score=351.24 Aligned_cols=198 Identities=26% Similarity=0.421 Sum_probs=170.4
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.+. ++++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 689999999963 45999999999999999999999999999999999999999999999999998776543 468999
Q ss_pred EcCcccc-ccccHhhhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVL-FEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~L-F~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||++.+ +..|+++|+.... ..+ ++++.++++..++.+.. .....+||||||||++||||+
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrl~laral 147 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERA-----------DDKVRELNGGHRRRVEIARAL 147 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------cCChhhCCHHHHHHHHHHHHH
Confidence 9999987 5679999996421 122 23456667766665432 233457999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
+++|+||||||||++||+.+.+.+.+.|++.. +++|+|+++|+++.+..||+|++|++|+
T Consensus 148 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~ 209 (236)
T TIGR03864 148 LHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGR 209 (236)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCe
Confidence 99999999999999999999999999999875 3789999999999998899999999985
No 226
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-37 Score=355.28 Aligned_cols=204 Identities=25% Similarity=0.407 Sum_probs=174.6
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCccEEEEcCEecCC--CChh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LGLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1339 (1479)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999964 359999999999999999999999999999999999997 479999999999864 3455
Q ss_pred hhhcceEEEcCccccccccHhhhcCCCC---CC-----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPIG---QY-----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~-----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
.+|+.++++||+|.+|++|+++|+.... .. .++++.++++.++++... +..++ ....+||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~----~~~~~LS~Gq~q 154 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET---KDNLD----RNAQAFSGGQQQ 154 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch---HHHhc----cChhhCCHHHHH
Confidence 6788999999999999999999996321 11 234567788888875321 11222 344679999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|+
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~ 223 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGD 223 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCE
Confidence 999999999999999999999999999999999999988777899999999999877 99999999985
No 227
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.7e-37 Score=347.32 Aligned_cols=201 Identities=30% Similarity=0.456 Sum_probs=168.8
Q ss_pred EEEEeeeeeecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCCh---hhhh
Q 000463 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL---HDLR 1342 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l---~~LR 1342 (1479)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68999999996431 259999999999999999999999999999999999999999999999999988763 5778
Q ss_pred cceEEEcCcc--ccc-cccHhhhcCC----CC-CCCHHHH----HHHHHHcCch-HHHHhCcCCccccccCCCCCCCchH
Q 000463 1343 SRFGIIPQEP--VLF-EGTVRSNIDP----IG-QYSDEEI----WKSLERCQLK-DVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1343 ~~i~iIpQdp--~LF-~gTIR~NLdp----~~-~~sd~eI----~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
++++++||+| .++ ..|+++|+.. .. ...+++. .++++..++. +.. .....+|||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~~LS~G~ 150 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVL-----------NRYPHELSGGQ 150 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHh-----------hCCchhcCHHH
Confidence 8999999999 344 4699999852 11 1112211 2556666653 222 23345799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||++|||||+++|+||+|||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|+
T Consensus 151 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~ 223 (228)
T cd03257 151 RQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGK 223 (228)
T ss_pred HHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCE
Confidence 9999999999999999999999999999999999999998754 7899999999999985 99999999995
No 228
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.6e-37 Score=351.58 Aligned_cols=199 Identities=25% Similarity=0.420 Sum_probs=174.1
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhh-hcceE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL-RSRFG 1346 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~i~ 1346 (1479)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |++++
T Consensus 3 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 3 LYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred EEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 789999999964 359999999999999999999999999999999999999999999999999988776654 55799
Q ss_pred EEcCccccccc-cHhhhcCCCCC------------C---CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1347 IIPQEPVLFEG-TVRSNIDPIGQ------------Y---SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~~~------------~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
++||++.+|.+ |+++|+..... . .++++.++++..++.+... ....+||||||
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Ge~ 149 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEAD-----------RLAGLLSHGQK 149 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHH
Confidence 99999999987 99999964211 0 2345677777777754432 23347999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++||||++++|++|+|||||++||+++.+.+.+.|++..+++|+|++||+++.+.+ ||+|++|++|+
T Consensus 150 qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 219 (242)
T TIGR03411 150 QWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGS 219 (242)
T ss_pred HHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCe
Confidence 9999999999999999999999999999999999999987777899999999999976 99999999985
No 229
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-37 Score=356.44 Aligned_cols=200 Identities=29% Similarity=0.460 Sum_probs=175.2
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCC-hhhhhcceE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG-LHDLRSRFG 1346 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~-l~~LR~~i~ 1346 (1479)
++++|++++|+.+ +.+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 6899999999643 35999999999999999999999999999999999999999999999999998765 467888999
Q ss_pred EEcCccc--cccccHhhhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1347 IIPQEPV--LFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1347 iIpQdp~--LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
++||+|. ++..|+++|+.... ..+ ++++.++++..++.+.....+ ..||+|||||++|||
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LS~G~~qrv~lar 149 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSP-----------KTLSGGQGQCVALAG 149 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCc-----------ccCCHHHHHHHHHHH
Confidence 9999985 56789999996421 122 345777888888876655433 468999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
||+++|+||||||||++||+.+...+.+.|++.. +++|||++||+++.+..||||++|++|+
T Consensus 150 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~ 212 (274)
T PRK13644 150 ILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGK 212 (274)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCE
Confidence 9999999999999999999999999999998764 4789999999999998899999999985
No 230
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-37 Score=353.98 Aligned_cols=199 Identities=27% Similarity=0.493 Sum_probs=176.8
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..++++.+++
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999964 359999999999999999999999999999999999999999999999999988888888899999
Q ss_pred EcCccccccc-cHhhhcCCC--------CC---CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHH
Q 000463 1348 IPQEPVLFEG-TVRSNIDPI--------GQ---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCL 1415 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~--------~~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1415 (1479)
+||++.+|.+ |+++|++.. +. ..++++.++++.+++.+..... ...||||||||++|
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~l 149 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----------LTDLSGGQRQRAFL 149 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----------cccCCHHHHHHHHH
Confidence 9999998877 999999742 11 1234678888888887655433 34689999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1416 GRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1416 ARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||++++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+
T Consensus 150 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~ 215 (255)
T PRK11231 150 AMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGH 215 (255)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCe
Confidence 999999999999999999999999999999998864 47899999999999876 99999999985
No 231
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.8e-37 Score=370.14 Aligned_cols=200 Identities=26% Similarity=0.468 Sum_probs=179.4
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.++++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.+++..++|++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999964 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcccc-ccccHhhhcCCCC-----------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1347 IIPQEPVL-FEGTVRSNIDPIG-----------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1347 iIpQdp~L-F~gTIR~NLdp~~-----------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
++||++.+ |+.|+++|+.... ..+++.+.++++.+++.++..+. ..+||||||||++
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-----------~~~LSgGerQRv~ 149 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-----------VTSLSGGERQRVL 149 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHH
Confidence 99999987 6779999995321 12245689999999998765433 2468999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||+++|+||+|||||++||+.+...+++.|++.. ++.|||+++|+++.+.. ||||++|++|+
T Consensus 150 IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~ 216 (402)
T PRK09536 150 LARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGR 216 (402)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999875 47899999999999965 99999999995
No 232
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2e-37 Score=362.76 Aligned_cols=200 Identities=28% Similarity=0.461 Sum_probs=174.0
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
..|+++|++++|+. ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.++|.|+...+ ...|++|
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999964 45999999999999999999999999999999999999999999999999997754 4578999
Q ss_pred EEEcCcccccc-ccHhhhcCCCC---CCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1346 GIIPQEPVLFE-GTVRSNIDPIG---QYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1346 ~iIpQdp~LF~-gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
|++||+|.+|. .|+++|+..+. ..++ +++.++++.+++.+. .+++++ +||+|||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~----~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENK-------ADAKVG----ELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchH-------hcCchh----hCCHHHHHHHHHHH
Confidence 99999999886 59999996322 1232 345677777777543 344443 69999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||+++|++|+|||||++||+.+.+.+++.|++.. +++|||++||+++.+.. ||||++|++|+
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999875 47899999999999987 99999999995
No 233
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.8e-37 Score=363.03 Aligned_cols=207 Identities=25% Similarity=0.407 Sum_probs=171.0
Q ss_pred EEEEeeEEEecCCC-CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------
Q 000463 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------- 708 (1479)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 708 (1479)
|+++|++++|+..+ ..++|+|+||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 34799999999999999999999999999999999999999999999987
Q ss_pred -eEEEEeccCcCC-CCcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHH
Q 000463 709 -TTAYVAQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1479)
Q Consensus 709 -~iayv~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 783 (1479)
.++|++|++.++ +.|++|||.++... +.+..++ + ..+-++.+...+ .....+.+|||||||||+||||
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~--~---v~e~l~~vgL~~--~~~~~~~~LSgGqkQRV~IARA 154 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR--K---VTELLALVGLGD--KHDSYPSNLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH--H---HHHHHHHcCCch--hhhCChhhCCHHHHHHHHHHHH
Confidence 279999998887 57999999986432 1111111 1 112233332222 3456788999999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 784 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
|+.+|+++|||||||+||+.+.+.+++.+.+...+ |.|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 155 L~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~ 231 (343)
T TIGR02314 155 LASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSH 231 (343)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcC
Confidence 99999999999999999999999998766655544 8999999999999865 999999999999999999998753
No 234
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-37 Score=353.82 Aligned_cols=204 Identities=27% Similarity=0.432 Sum_probs=175.3
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcc---CCC--CccEEEEcCEecCCC--Chh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRL---VEP--SGGRIIIDGIDISLL--GLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl---~~p--~~G~I~IDG~dI~~i--~l~ 1339 (1479)
.++++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 5899999999964 4599999999999999999999999999999999997 444 589999999998764 346
Q ss_pred hhhcceEEEcCccccccccHhhhcCCC---CC-----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI---GQ-----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~-----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
.+|++++|+||+|.+|.+|+++|+... .. ..+++++++++.+++.+.+.. .....+.+|||||||
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 153 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKD-------KLKESAFALSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhh-------hhhCCcccCCHHHHH
Confidence 778899999999999999999999631 11 123567888888888654432 122345689999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||+|+|+++.+.+ ||||++|++|+
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~ 222 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGE 222 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCE
Confidence 999999999999999999999999999999999999998778999999999999976 99999999985
No 235
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.2e-37 Score=350.04 Aligned_cols=199 Identities=29% Similarity=0.512 Sum_probs=170.7
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhh-hcceE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL-RSRFG 1346 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~i~ 1346 (1479)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 578999999963 359999999999999999999999999999999999999999999999999988776654 56899
Q ss_pred EEcCccccccc-cHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHH
Q 000463 1347 IIPQEPVLFEG-TVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1479)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1418 (1479)
++||++.+|.+ |+++|+... .... ++++.++++..++.+... ....+||+|||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la~a 147 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRK-----------SKASSLSGGERRRVEIARA 147 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHHHHHHHH
Confidence 99999999987 999999632 1122 234556666666654332 2345799999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1419 LLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
++++|++|||||||++||.++.+.+.+.|++.. +++|+|+++|+++.+.. ||+|++|++|+
T Consensus 148 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~ 210 (232)
T cd03218 148 LATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGK 210 (232)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 999999999999999999999999999998865 47899999999998876 99999999995
No 236
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-37 Score=359.89 Aligned_cols=203 Identities=27% Similarity=0.406 Sum_probs=173.2
Q ss_pred cEEEEeeeeeecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCC----CChh
Q 000463 1267 NVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL----LGLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~----i~l~ 1339 (1479)
.++++|++++|+... .++|+||||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++.. .+..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996432 359999999999999999999999999999999999999999999999999863 3466
Q ss_pred hhhcceEEEcCcc--ccccccHhhhcCCCC---CCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1340 DLRSRFGIIPQEP--VLFEGTVRSNIDPIG---QYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
..|++++++||+| .+|+.|+++|+.... ..+. +.+.++++.++|.+.+. +. ....||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~------~~----~~~~LSgGq~ 151 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL------AR----SPFELSGGQM 151 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh------hC----CcccCCHHHH
Confidence 7888999999998 688889999995211 1233 34667788888863221 11 2346999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++|||||+.+|+||||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|+
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~ 223 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGT 223 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999998753 7899999999999876 99999999995
No 237
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=4.4e-37 Score=345.49 Aligned_cols=198 Identities=26% Similarity=0.394 Sum_probs=174.2
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.|+++|++++|.. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5999999999963 35999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcCccccccccHhhhcCCC----CC-CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhcc
Q 000463 1347 IIPQEPVLFEGTVRSNIDPI----GQ-YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1479)
Q Consensus 1347 iIpQdp~LF~gTIR~NLdp~----~~-~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1421 (1479)
++||+|.+|+.|+++|+... .. ..++++.++++..++.+.. ......+||+|||||++|||||++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTI----------LTKNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChHH----------hcCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999631 11 2344567788888775321 122345799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhhcCEEEEEe
Q 000463 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVD 1476 (1479)
Q Consensus 1422 ~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~ 1476 (1479)
+|+++||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+..||+|++|+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~ 211 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQ 211 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEe
Confidence 9999999999999999999999999998653 789999999999998899999996
No 238
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-37 Score=333.52 Aligned_cols=172 Identities=35% Similarity=0.561 Sum_probs=159.6
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCC--hhhhhcce
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG--LHDLRSRF 1345 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~--l~~LR~~i 1345 (1479)
|+++|++++|+. .++++|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ....|+++
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 45999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred EEEcCccccccc-cHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCC
Q 000463 1346 GIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1479)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1424 (1479)
+++||+|.+|.+ |+++|+... ||+|||||++|||||+++|+
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~--------------------------------------lS~G~~qr~~la~al~~~p~ 120 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG--------------------------------------LSGGQQQRVALARALAMDPD 120 (178)
T ss_pred EEEecCCccCCCCCHHHheeec--------------------------------------CCHHHHHHHHHHHHHHCCCC
Confidence 999999998865 999999642 89999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1425 LLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1425 ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|||||++||+.+...+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 121 llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 121 VLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999999999999999998754 5899999999999986 99999999996
No 239
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-37 Score=360.46 Aligned_cols=202 Identities=26% Similarity=0.343 Sum_probs=172.7
Q ss_pred cEEEEeeeeeecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCC--------
Q 000463 1267 NVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL-------- 1335 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~-------- 1335 (1479)
.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 388999999997542 259999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CChhhhhcceEEEcCcc--ccccccHhhhcCCCC---CCC----HHHHHHHHHHcCch-HHHHh
Q 000463 1336 ----------------LGLHDLRSRFGIIPQEP--VLFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLK-DVVAA 1389 (1479)
Q Consensus 1336 ----------------i~l~~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~-~~i~~ 1389 (1479)
.+...+|++|+++||+| .+|..|+++||.... ..+ ++++.++++.++|. ++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~ 161 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQR 161 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhC
Confidence 13456889999999987 688889999996321 223 34577888888885 44433
Q ss_pred CcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh
Q 000463 1390 KPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD 1468 (1479)
Q Consensus 1390 lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~ 1468 (1479)
. ..+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+..
T Consensus 162 ~-----------~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 162 S-----------PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLE 230 (305)
T ss_pred C-----------hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHH
Confidence 3 34689999999999999999999999999999999999999999998864 47899999999998865
Q ss_pred -cCEEEEEeCCC
Q 000463 1469 -CDRVIVVDAGL 1479 (1479)
Q Consensus 1469 -~DrIlVL~~G~ 1479 (1479)
||||++|++|+
T Consensus 231 ~adrv~vl~~G~ 242 (305)
T PRK13651 231 WTKRTIFFKDGK 242 (305)
T ss_pred hCCEEEEEECCE
Confidence 99999999995
No 240
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-37 Score=356.29 Aligned_cols=202 Identities=26% Similarity=0.435 Sum_probs=178.6
Q ss_pred cEEEEeeeeeecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1267 NVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
-++++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743 24599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEcCcc--ccccccHhhhcCCC---CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1346 GIIPQEP--VLFEGTVRSNIDPI---GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1346 ~iIpQdp--~LF~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
+++||+| .++..|+.+||... ...++ +++.++++.+++.++....| ..||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREP-----------ARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 47788999999632 12333 34577888888877655433 46899999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|||+++|+||||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|+
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~ 217 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGE 217 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999998754 789999999999998899999999995
No 241
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-37 Score=351.75 Aligned_cols=205 Identities=29% Similarity=0.435 Sum_probs=176.2
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecCC--CCh
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISL--LGL 1338 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~l 1338 (1479)
|.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 57999999999974 3599999999999999999999999999999999999863 69999999999875 355
Q ss_pred hhhhcceEEEcCccccccccHhhhcCCCC---C-C----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1339 HDLRSRFGIIPQEPVLFEGTVRSNIDPIG---Q-Y----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
..+|++++++||+|.+|..|+++|+.... . . .++++.++++.+++.+.+.. .......+||+|||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKD-------RLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHH-------HHhcCCCCCCHHHH
Confidence 67899999999999999999999996321 1 1 23556777888877644321 22334567999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||+|||+++.+.+ ||||++|++|+
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~ 222 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGE 222 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999987668899999999999876 99999999985
No 242
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-37 Score=345.31 Aligned_cols=195 Identities=26% Similarity=0.479 Sum_probs=169.3
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 578999999963 459999999999999999999999999999999999999999999999998753 56789999
Q ss_pred EcCccccccc-cHhhhcCCCC---CC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFEG-TVRSNIDPIG---QY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~~---~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||++.+|.+ |+++|+.... .. .++++.++++..++.+..... ..+||+|||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~la~al 143 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANKR-----------VEELSKGNQQKVQFIAAV 143 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhCc-----------HhhCCHHHHHHHHHHHHH
Confidence 9999999876 9999985321 11 134567778888776554332 346899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|+
T Consensus 144 ~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 205 (210)
T cd03269 144 IHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGR 205 (210)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCE
Confidence 99999999999999999999999999998864 47899999999999876 99999999985
No 243
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-37 Score=351.72 Aligned_cols=204 Identities=26% Similarity=0.390 Sum_probs=176.0
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCC-----ccEEEEcCEecCCC--Chh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS-----GGRIIIDGIDISLL--GLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~-----~G~I~IDG~dI~~i--~l~ 1339 (1479)
.++++|++++|.. +++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 5899999999963 45999999999999999999999999999999999999997 69999999998653 456
Q ss_pred hhhcceEEEcCccccccccHhhhcCCCC---C-CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPIG---Q-YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
.+|++++++||+|.+|..|+++|+.... . .. ++.+.++++..++.+.+.. .......+||+||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKD-------NLHKSGLALSGGQQQ 154 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhh-------HhhCCcccCCHHHHH
Confidence 7889999999999999999999996321 1 11 2445667777777654432 234456789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++|||||+++|++|||||||++||..+...+.+.|++..+++|||+|||+++.+.+ ||+|++|++|+
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~ 223 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGD 223 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCe
Confidence 999999999999999999999999999999999999987667999999999999987 89999999985
No 244
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-37 Score=355.10 Aligned_cols=204 Identities=29% Similarity=0.430 Sum_probs=175.0
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCccEEEEcCEecCCCC--hh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISLLG--LH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~i~--l~ 1339 (1479)
.-+++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++...+ ..
T Consensus 5 ~~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 5 HASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 3478999999963 459999999999999999999999999999999999986 47999999999987653 34
Q ss_pred hhhcceEEEcCccccccccHhhhcCCC---CC------CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI---GQ------YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
.+|++++|+||+|.+|.+|+++|+... .. ..++++.++++..++.+.+. +.+...+.+||+|||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHH
Confidence 678899999999999999999999631 11 12356778889888865432 122334567999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++||||++++|+||||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|+
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~ 225 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGR 225 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCE
Confidence 9999999999999999999999999999999999999988778999999999999976 99999999985
No 245
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.9e-37 Score=342.47 Aligned_cols=206 Identities=30% Similarity=0.396 Sum_probs=183.0
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1479)
.++++|+++.|+.. ++++|+|+||++++||+++|+|+||||||||+++|+|+.+|++|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 2 DIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred cEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 47899999999642 34799999999999999999999999999999999999999999999987 37
Q ss_pred EEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 711 AYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 711 ayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
+|++|++.+++.|++||+.+......++..+.++..++.+.+..++.|.++..++++.+||||||||++||||++.+|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999998999999987655554555556677778888888899999999999999999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecC
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGR 851 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~ 851 (1479)
+||||||++||+.+++.+.+.+.+ ..+++|+|++||+++.++.||++++|++|++++.|+
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIRE-AFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 999999999999999988865544 345789999999999998899999999999988765
No 246
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-37 Score=352.26 Aligned_cols=204 Identities=27% Similarity=0.393 Sum_probs=174.3
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC--C---CccEEEEcCEecCCC--Chh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE--P---SGGRIIIDGIDISLL--GLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~--p---~~G~I~IDG~dI~~i--~l~ 1339 (1479)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ | ++|+|.+||.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 4899999999964 359999999999999999999999999999999999953 6 499999999998653 345
Q ss_pred hhhcceEEEcCccccccccHhhhcCCC----CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI----GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
.+|++++++||+|.+|+.|+++|+... +.. .++++.++++.+++.+.+.. .......+||+||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 155 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKD-------RLHDSALGLSGGQQQ 155 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHH-------HHhcCcccCCHHHHH
Confidence 678899999999999999999999621 111 23456778888887654321 223345679999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++|||||+++|+||||||||++||.++...+.+.|++..+++|||+|+|+++.+.. ||||++|++|+
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~ 224 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGD 224 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999987677999999999999876 99999999985
No 247
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.8e-37 Score=353.19 Aligned_cols=203 Identities=29% Similarity=0.449 Sum_probs=175.6
Q ss_pred CccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCC-------
Q 000463 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG------- 1337 (1479)
Q Consensus 1265 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~------- 1337 (1479)
++.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+.
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999974 35999999999999999999999999999999999999999999999999986431
Q ss_pred ------hhhhhcceEEEcCccccccc-cHhhhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCC
Q 000463 1338 ------LHDLRSRFGIIPQEPVLFEG-TVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSG 1402 (1479)
Q Consensus 1338 ------l~~LR~~i~iIpQdp~LF~g-TIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1402 (1479)
...+|++++++||+|.+|.+ |+++|+... .... ++++.+++++.++.+.... ...
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~----------~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQG----------KYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhh----------CCc
Confidence 34678899999999999975 999999631 1122 3467788888888665421 223
Q ss_pred CCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1403 DNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1403 ~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
..||+|||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|+|+++.+.+ ||||++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 5799999999999999999999999999999999999999999999864 47999999999999987 99999999985
No 248
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-37 Score=354.87 Aligned_cols=204 Identities=27% Similarity=0.452 Sum_probs=174.5
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCccEEEEcCEecCC--CChh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LGLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1339 (1479)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 5999999999963 459999999999999999999999999999999999865 789999999999865 3445
Q ss_pred hhhcceEEEcCccccccccHhhhcCCC----CC----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI----GQ----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
.+|++++|+||+|.+|.+|+++|+... .. ..++.+.++++..++.+.+. ........+|||||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~q 171 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSLSGGQQQ 171 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccCCHHHHH
Confidence 678899999999999999999999631 11 11345777888887753221 1123345689999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|+
T Consensus 172 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~ 240 (268)
T PRK14248 172 RLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGD 240 (268)
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999998667899999999998876 99999999985
No 249
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2.6e-37 Score=346.33 Aligned_cols=201 Identities=27% Similarity=0.398 Sum_probs=176.0
Q ss_pred EEEEeeeeeecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChh---hhh
Q 000463 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH---DLR 1342 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR 1342 (1479)
++++|++++|+++. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|++||.++..++.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999997532 4699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cceEEEcCcccccc-ccHhhhcCCCC----CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHH
Q 000463 1343 SRFGIIPQEPVLFE-GTVRSNIDPIG----QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1479)
Q Consensus 1343 ~~i~iIpQdp~LF~-gTIR~NLdp~~----~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1413 (1479)
++++++||+|.+|. .|+.+|+.... ..+ ++++.++++++++.+.....| .+||+|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP-----------HNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHH
Confidence 89999999999987 69999996321 222 235778888888877766655 36899999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1414 ~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
+||||++++|++|+|||||++||.++.+.+.+.|++..+ ++|+|+|+|+++....||+|++|++|+
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~ 218 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGK 218 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCE
Confidence 999999999999999999999999999999999988753 799999999999776699999999985
No 250
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.9e-37 Score=366.63 Aligned_cols=198 Identities=27% Similarity=0.421 Sum_probs=176.1
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.++++|++++|+. ..+|+|+||++++||++||+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ +++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999964 4589999999999999999999999999999999999999999999999999877654 67899
Q ss_pred EEcCcccccc-ccHhhhcCCC-C--CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHH
Q 000463 1347 IIPQEPVLFE-GTVRSNIDPI-G--QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1479)
Q Consensus 1347 iIpQdp~LF~-gTIR~NLdp~-~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1418 (1479)
++||++.+|. .|+++|+... . ..+ ++++.++++..+|.++....| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYP-----------GQLSGGQQQRVALARA 148 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999999996 5999999631 1 122 456788899998887766555 3689999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1419 LLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|+++|++|+||||||+||..+...+++.|++..+ +.|+|+|||+++.+.. ||||++|++|+
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~ 212 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGV 212 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999998754 7899999999999876 99999999996
No 251
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-37 Score=351.41 Aligned_cols=206 Identities=26% Similarity=0.425 Sum_probs=176.6
Q ss_pred CccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC--C---CccEEEEcCEecCCC--C
Q 000463 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE--P---SGGRIIIDGIDISLL--G 1337 (1479)
Q Consensus 1265 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~--p---~~G~I~IDG~dI~~i--~ 1337 (1479)
.|.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 367999999999973 359999999999999999999999999999999999986 4 689999999999754 3
Q ss_pred hhhhhcceEEEcCcccccc-ccHhhhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCch
Q 000463 1338 LHDLRSRFGIIPQEPVLFE-GTVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVG 1408 (1479)
Q Consensus 1338 l~~LR~~i~iIpQdp~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1408 (1479)
...+|++++++||++.+|. .|+++|+... +..+ ++++.++++.+++.+.+... ......+||+|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDR-------LKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHH-------hhCCcCcCCHH
Confidence 4567899999999999998 5999999631 1112 34567788888886544321 12345689999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1409 QRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1409 QrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||++||||++++|++|||||||++||..+.+.+.+.|++..++.|||++||+++.+.. ||||++|++|+
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~ 224 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGD 224 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999998778899999999999976 99999999985
No 252
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-37 Score=352.01 Aligned_cols=204 Identities=24% Similarity=0.420 Sum_probs=176.0
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecCCC--Chh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLL--GLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1339 (1479)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999963 4599999999999999999999999999999999999984 899999999998753 345
Q ss_pred hhhcceEEEcCccccccccHhhhcCCC----CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI----GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
.+|++++++||+|.+|..|+++|+... +.. .++++.++++..++.+.+.. .......+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq~q 153 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKS-------ELNKPGTRLSGGQQQ 153 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHH-------HHhCChhhcCHHHHH
Confidence 678899999999999999999999631 111 23456778888888654422 233445689999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++||||++++|+||+|||||++||..+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|+
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~ 222 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGE 222 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999998778999999999998876 99999999985
No 253
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-37 Score=330.82 Aligned_cols=169 Identities=34% Similarity=0.617 Sum_probs=157.2
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGK--KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 478999999964 25999999999999999999999999999999999999999999999999998765 677889999
Q ss_pred EcCccccccc-cHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEE
Q 000463 1348 IPQEPVLFEG-TVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLL 1426 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1426 (1479)
+||+|.+|.+ |+++|+. ||+|||||++|||||+++|+||
T Consensus 78 ~~q~~~~~~~~tv~~~~~----------------------------------------LS~G~~qrv~laral~~~p~il 117 (173)
T cd03230 78 LPEEPSLYENLTVRENLK----------------------------------------LSGGMKQRLALAQALLHDPELL 117 (173)
T ss_pred EecCCccccCCcHHHHhh----------------------------------------cCHHHHHHHHHHHHHHcCCCEE
Confidence 9999999887 9999973 8999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1427 FMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1427 iLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+|||||++||..+.+.+.+.|++.. ++.|+|+++|+.+.+.+ ||+|++|++|+
T Consensus 118 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~ 172 (173)
T cd03230 118 ILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGR 172 (173)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999875 35899999999999985 99999999996
No 254
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-37 Score=354.52 Aligned_cols=206 Identities=26% Similarity=0.382 Sum_probs=178.7
Q ss_pred CccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecCC--CC
Q 000463 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISL--LG 1337 (1479)
Q Consensus 1265 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~ 1337 (1479)
.+.++++|++++|.. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.|+.. .+
T Consensus 23 ~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~ 100 (272)
T PRK14236 23 QTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD 100 (272)
T ss_pred CcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC
Confidence 457999999999964 3599999999999999999999999999999999999884 89999999999875 34
Q ss_pred hhhhhcceEEEcCccccccccHhhhcCCC---CC-CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchH
Q 000463 1338 LHDLRSRFGIIPQEPVLFEGTVRSNIDPI---GQ-YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1338 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~-~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
...+|++++++||++.+|.+|+++|+... .. .. ++++.++++.+++.+.+.. .....+.+||+||
T Consensus 101 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq 173 (272)
T PRK14236 101 VAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKD-------RLHENAFGLSGGQ 173 (272)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHH-------HhhCCcccCCHHH
Confidence 56788999999999999999999999632 11 11 3457888888888765432 2234456899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||||++|++|+
T Consensus 174 ~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~ 244 (272)
T PRK14236 174 QQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGK 244 (272)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999998778999999999999876 99999999985
No 255
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-37 Score=357.55 Aligned_cols=198 Identities=28% Similarity=0.413 Sum_probs=172.3
Q ss_pred EEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhh----hcc
Q 000463 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL----RSR 1344 (1479)
Q Consensus 1269 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L----R~~ 1344 (1479)
.++|++.+|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 45678888864 458999999999999999999999999999999999999999999999999988765543 468
Q ss_pred eEEEcCcccccc-ccHhhhcCCC---CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1345 FGIIPQEPVLFE-GTVRSNIDPI---GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1345 i~iIpQdp~LF~-gTIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
++++||+|.+|. .|+++|+... ... .++++.++++.+++.+.....|. +||+|||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYPD-----------ELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCcc-----------cCCHHHHHHHHHH
Confidence 999999999885 5999999631 111 23567888999999877766553 6899999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|+
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~ 238 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGR 238 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999998643 7899999999999876 99999999985
No 256
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-37 Score=355.46 Aligned_cols=202 Identities=24% Similarity=0.415 Sum_probs=176.8
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.++++|++++|+...+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 58999999999754446999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcCccc--cccccHhhhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1347 IIPQEPV--LFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1347 iIpQdp~--LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
++||+|. ++..|+++|+.... ... ++++.++++..++.+..... ..+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lar 155 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYE-----------PNALSGGQKQRVAIAG 155 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------cccCCHHHHHHHHHHH
Confidence 9999994 44568999985321 112 34677888888886654432 3479999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
|++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||||++|++|+
T Consensus 156 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~ 219 (269)
T PRK13648 156 VLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGT 219 (269)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCE
Confidence 99999999999999999999999999999998653 789999999999998899999999995
No 257
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-37 Score=355.98 Aligned_cols=202 Identities=29% Similarity=0.451 Sum_probs=178.0
Q ss_pred cEEEEeeeeeecCC----CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCC-hhhh
Q 000463 1267 NVDLIDLQVRYRSN----TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG-LHDL 1341 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~----~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~-l~~L 1341 (1479)
-++++|++++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 48999999999743 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hcceEEEcCccc--cccccHhhhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHH
Q 000463 1342 RSRFGIIPQEPV--LFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1479)
Q Consensus 1342 R~~i~iIpQdp~--LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1412 (1479)
|++++++||+|. +|..|+++|+.... ..+ ++++.++++.+++.++....| .+||+|||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 67679999996321 122 456888999999988776655 3689999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhhcCEEEEEeCCC
Q 000463 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1413 l~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1479)
++|||||+++|++|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+..||||++|++|+
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~ 221 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGK 221 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCE
Confidence 999999999999999999999999999999999999864 3789999999999998899999999985
No 258
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.9e-37 Score=367.25 Aligned_cols=187 Identities=29% Similarity=0.424 Sum_probs=168.0
Q ss_pred CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhh----hcceEEEcCccccccc
Q 000463 1282 PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL----RSRFGIIPQEPVLFEG 1357 (1479)
Q Consensus 1282 ~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L----R~~i~iIpQdp~LF~g 1357 (1479)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|+|||.|+...+..++ |++++||||++.+|..
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 458999999999999999999999999999999999999999999999999999998887 7899999999999975
Q ss_pred -cHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEe
Q 000463 1358 -TVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMD 1429 (1479)
Q Consensus 1358 -TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLD 1429 (1479)
||++|+... ...+ ++++.++++.++|.++....|. +||||||||++|||||+++|+||+||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p~-----------~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYPD-----------ELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCChh-----------hCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999631 1122 4567889999999877666553 68999999999999999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1430 EATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1430 EaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||+||+.+.+.+++.+++.. .++|+|+|||+++.+.. ||||++|++|+
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~ 207 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGE 207 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 9999999999999999998764 37899999999998766 99999999995
No 259
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5e-37 Score=364.61 Aligned_cols=198 Identities=28% Similarity=0.452 Sum_probs=175.1
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+. .|++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 4889999999964 359999999999999999999999999999999999999999999999999987653 467899
Q ss_pred EEcCccccccc-cHhhhcCCC-C------CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1347 IIPQEPVLFEG-TVRSNIDPI-G------QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~-~------~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
++||++.+|.. |+++|+... . ..+ ++++.++++.+++.++....| ..||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----------AQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 99999999975 999999632 1 122 356778899999877665554 368999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||+++|++|+|||||++||..+...+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|+
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~ 214 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGN 214 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999998764 6899999999999877 99999999996
No 260
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-37 Score=353.70 Aligned_cols=204 Identities=25% Similarity=0.391 Sum_probs=175.0
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecCCC--Chh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLL--GLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1339 (1479)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 12 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 12 QIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 6999999999963 3599999999999999999999999999999999999985 799999999998653 345
Q ss_pred hhhcceEEEcCccccccccHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1412 (1479)
.+|++++|+||++.+|..|+++|+... ...+ ++++.++++.+++.+.+. ..++. ...+||||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~----~~~~LSgG~~qr 162 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS---DRLKS----PALSLSGGQQQR 162 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh---hhhcC----ChhhCCHHHHHH
Confidence 678899999999999999999999631 1122 235677888888754321 12333 345799999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1413 l~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
++|||||+++|+||+|||||++||.++...+.+.|++..+++|||+|||+++.+.+ ||||++|++|+
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~ 230 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGE 230 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999987668999999999999976 99999999995
No 261
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4e-37 Score=352.14 Aligned_cols=199 Identities=27% Similarity=0.463 Sum_probs=173.6
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCC----------
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG---------- 1337 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~---------- 1337 (1479)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 578999999964 35999999999999999999999999999999999999999999999999997653
Q ss_pred ---hhhhhcceEEEcCcccccc-ccHhhhcCCC----CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCC
Q 000463 1338 ---LHDLRSRFGIIPQEPVLFE-GTVRSNIDPI----GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNW 1405 (1479)
Q Consensus 1338 ---l~~LR~~i~iIpQdp~LF~-gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1405 (1479)
...+|++++++||++.+|. .|+++|+... ... .++++.++++..++.+.....| ..|
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~L 147 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMP-----------AQL 147 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcCh-----------hhc
Confidence 2467889999999999885 7999999631 111 2356778888888876655443 468
Q ss_pred CchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1406 SVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1406 SgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||||++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.+ |||+++|++|+
T Consensus 148 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~ 224 (252)
T TIGR03005 148 SGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGR 224 (252)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 99999999999999999999999999999999999999999998653 7899999999999976 99999999995
No 262
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=5.2e-37 Score=342.16 Aligned_cols=195 Identities=24% Similarity=0.433 Sum_probs=172.4
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+. +++|+||++++||.+||+|+||||||||+++|+|+++|++|+|.+||.|+.+.+ ..|+++++
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999962 568999999999999999999999999999999999999999999999987643 46788999
Q ss_pred EcCccccccc-cHhhhcCC-CC-C-----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFEG-TVRSNIDP-IG-Q-----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp-~~-~-----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||+|.+|.+ |+++|+.. .. . ..++++.++++..++.+.....|. +||+|||||++||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~G~~qrl~laral 143 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLPE-----------QLSGGQRQRVALARCL 143 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCcc-----------cCCHHHHHHHHHHHHH
Confidence 9999999875 99999952 21 1 134578889999999877666653 5899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|+|++|||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+.+ ||+|++|++|+
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~ 206 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGK 206 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCe
Confidence 999999999999999999999999999998653 7899999999999876 99999999986
No 263
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-37 Score=349.31 Aligned_cols=200 Identities=29% Similarity=0.406 Sum_probs=172.2
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecC------CCChhh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDIS------LLGLHD 1340 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~------~i~l~~ 1340 (1479)
.++++|++++|+. +.+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ......
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 2 SIQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 3789999999964 35999999999999999999999999999999999999999999999999874 123456
Q ss_pred hhcceEEEcCccccccc-cHhhhcCC--C--CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1341 LRSRFGIIPQEPVLFEG-TVRSNIDP--I--GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1341 LR~~i~iIpQdp~LF~g-TIR~NLdp--~--~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
+|++++++||+|.+|.+ |+++|+.. . .... .+++.++++..++.++....| .+|||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFP-----------LHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHH
Confidence 78899999999999976 99999952 1 1122 334667777777766555443 468999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++||||++++|+||||||||++||+++...+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~ 218 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGH 218 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 9999999999999999999999999999999999999865 37899999999999976 99999999985
No 264
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-37 Score=330.52 Aligned_cols=210 Identities=27% Similarity=0.397 Sum_probs=169.0
Q ss_pred cEEEEeeEEEecCCC-CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000463 644 AVEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1479)
.++++|+++.|+... ..++|+||||++.+||.++|+|++|||||||.++|+|..+|++|+|.++|+
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 689999999996432 125999999999999999999999999999999999999999999999983
Q ss_pred -EEEEeccCcC---CCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHh
Q 000463 710 -TAYVAQTSWI---QNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1479)
Q Consensus 710 -iayv~Q~~~i---~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 785 (1479)
+-+|+|+|.- +..||++-|.=+...+ .+.+.-+. ..+-++.+.. ......+++.+|||||||||||||||.
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~--~~~~~~~~--i~~~L~~VgL-~~~~l~R~P~eLSGGQ~QRiaIARAL~ 157 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPH--GLSKSQQR--IAELLDQVGL-PPSFLDRRPHELSGGQRQRIAIARALI 157 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccC--CccHHHHH--HHHHHHHcCC-CHHHHhcCchhcChhHHHHHHHHHHhc
Confidence 6799999853 5679998775443221 11111110 1122222221 123456788999999999999999999
Q ss_pred cCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 786 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
.+|+++|||||||+||+.+...|++.+.+... .+-|.|+||||+..+.+ ||||.||++|++++.++.+++...
T Consensus 158 ~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 158 PEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred cCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 99999999999999999999999987665543 47899999999999987 999999999999999999888764
No 265
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-37 Score=351.68 Aligned_cols=204 Identities=26% Similarity=0.394 Sum_probs=174.7
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC--C---CccEEEEcCEecCC--CChh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE--P---SGGRIIIDGIDISL--LGLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~--p---~~G~I~IDG~dI~~--i~l~ 1339 (1479)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 5899999999974 359999999999999999999999999999999999987 3 59999999999864 3456
Q ss_pred hhhcceEEEcCccccccccHhhhcCCC----CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI----GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
.+|++++++||+|.+|.+|+++|+... +..++ +++.++++..++.+.+.. .......+||+||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKD-------RLHTQALSLSGGQQQ 162 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHH
Confidence 788999999999999999999999532 11222 345667778887654321 123345679999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++||||++++|+||+|||||++||+++...+.+.|++..+++|+|+|+|+++.+.+ ||||++|++|+
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~ 231 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGE 231 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999998778999999999999876 99999999985
No 266
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-37 Score=351.02 Aligned_cols=204 Identities=25% Similarity=0.418 Sum_probs=177.3
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCccEEEEcCEecCC--CChh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LGLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1339 (1479)
.++++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|+|+.+ |++|+|.+||.+++. .+..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 3789999999974 359999999999999999999999999999999999975 489999999999875 3466
Q ss_pred hhhcceEEEcCccccccccHhhhcCCC-C--C-CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI-G--Q-YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~-~--~-~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
.+|++++++||+|.+|.+|+++|+... . . .+ ++++.++++.+++.+.+... + ...+.+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~----~~~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK---L----DKSALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH---H----hCCcccCCHHHHH
Confidence 789999999999999999999999632 1 1 12 24567788999987765422 2 3345689999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++|||||+++|+||+|||||++||..+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|+
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~ 222 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGE 222 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCe
Confidence 999999999999999999999999999999999999998778999999999999887 99999999985
No 267
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.3e-37 Score=348.57 Aligned_cols=199 Identities=25% Similarity=0.418 Sum_probs=172.0
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCC--Chhhhhcce
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLL--GLHDLRSRF 1345 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i--~l~~LR~~i 1345 (1479)
++++|++++|+. +++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999963 4599999999999999999999999999999999999999999999999999764 345678899
Q ss_pred EEEcCcccccc-ccHhhhcCCCC----CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1346 GIIPQEPVLFE-GTVRSNIDPIG----QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1346 ~iIpQdp~LF~-gTIR~NLdp~~----~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
+++||++.+|. .|+++|+.... ..+ ++++.++++..++.+.....+ ..||+|||||++||
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LS~G~~qrv~la 148 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYP-----------SELSGGQQQRVAIA 148 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcCh-----------hhcCHHHHHHHHHH
Confidence 99999998886 59999996321 122 244667777777765544333 46899999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++++|+||+|||||++||.++...+.+.|++.. +++|+|+|||+++.+.. ||||++|++|+
T Consensus 149 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 213 (240)
T PRK09493 149 RALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGR 213 (240)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999998864 47899999999999976 99999999985
No 268
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-37 Score=354.28 Aligned_cols=206 Identities=25% Similarity=0.410 Sum_probs=176.5
Q ss_pred CccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCccEEEEcCEecCCC--C
Q 000463 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISLL--G 1337 (1479)
Q Consensus 1265 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~i--~ 1337 (1479)
...|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++... +
T Consensus 37 ~~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 37 ETVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred CceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 345899999999964 359999999999999999999999999999999999997 6899999999998653 4
Q ss_pred hhhhhcceEEEcCccccccccHhhhcCCC------CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1338 LHDLRSRFGIIPQEPVLFEGTVRSNIDPI------GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1338 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~------~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
...+|++++++||++.+|.+|+++|+... ....+++++++++..++...+.. .......+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKD-------QLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHH-------HHhCCcccCCHHHHH
Confidence 56788999999999999989999999631 11124578888988888644321 122344679999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEE-EEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVI-VVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIl-VL~~G~ 1479 (1479)
|++|||||+++|+||||||||++||.++.+.+.+.|++..+++|+|+|+|+++.+.. |||++ +|++|+
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~ 257 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGE 257 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCE
Confidence 999999999999999999999999999999999999998777899999999999887 99975 568885
No 269
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-37 Score=353.03 Aligned_cols=209 Identities=24% Similarity=0.377 Sum_probs=180.2
Q ss_pred CCCCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecC--
Q 000463 1262 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDIS-- 1334 (1479)
Q Consensus 1262 wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~-- 1334 (1479)
-|..+.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 11 ~~~~~~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~ 88 (265)
T PRK14252 11 SPTQQKSEVNKLNFYYGG--YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNIL 88 (265)
T ss_pred cCCCceEEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccc
Confidence 356788999999999974 3599999999999999999999999999999999999875 7999999998874
Q ss_pred --CCChhhhhcceEEEcCccccccccHhhhcCCCC--------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCC
Q 000463 1335 --LLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG--------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN 1404 (1479)
Q Consensus 1335 --~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~--------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1404 (1479)
....+.+|++++++||+|.+|.+|+++|+.... +..++++.++++.+++.+.+. ........+
T Consensus 89 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~ 161 (265)
T PRK14252 89 SPEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVK-------DRLGDLAFN 161 (265)
T ss_pred ccccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhh-------HHHhCCccc
Confidence 234567889999999999999999999996321 122467888888888764332 223344568
Q ss_pred CCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1405 WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1405 LSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||+|||||++|||||+++|++|+|||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|+
T Consensus 162 LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~ 237 (265)
T PRK14252 162 LSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGE 237 (265)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999988777899999999999976 99999999985
No 270
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=357.42 Aligned_cols=213 Identities=23% Similarity=0.380 Sum_probs=173.4
Q ss_pred CccEEEEeeEEEecCCC--CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------
Q 000463 642 NIAVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------- 708 (1479)
+..|+++|++|.|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 19 ~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~ 98 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHE 98 (320)
T ss_pred CceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccc
Confidence 35799999999996421 24699999999999999999999999999999999999999999999875
Q ss_pred ------------------eEEEEeccC--cCCCCcHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCccccccCC
Q 000463 709 ------------------TTAYVAQTS--WIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERG 767 (1479)
Q Consensus 709 ------------------~iayv~Q~~--~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g 767 (1479)
.++||+|+| .+++.|++|||.|+... .....+..-++ .+.++.+... ....++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~---~~~l~~~gL~-~~~~~~~~ 174 (320)
T PRK13631 99 LITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLA---KFYLNKMGLD-DSYLERSP 174 (320)
T ss_pred ccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHH---HHHHHHcCCC-hhHhcCCc
Confidence 168999998 68888999999987421 11111110111 1223333221 12356788
Q ss_pred CccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccc-cCCEEEEEeCCEE
Q 000463 768 INLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMI 846 (1479)
Q Consensus 768 ~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~-~~D~i~~l~~G~i 846 (1479)
.+|||||||||+|||||+++|+++||||||++||+.+++.+++.+.+...+|+|+|+|||+++++. .||+|++|++|++
T Consensus 175 ~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i 254 (320)
T PRK13631 175 FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKI 254 (320)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999998766555456899999999999875 5999999999999
Q ss_pred EEecChHHHHhc
Q 000463 847 VQSGRYNALLNS 858 (1479)
Q Consensus 847 ~~~g~~~~l~~~ 858 (1479)
++.|+++++...
T Consensus 255 ~~~g~~~~~~~~ 266 (320)
T PRK13631 255 LKTGTPYEIFTD 266 (320)
T ss_pred EEeCCHHHHhcC
Confidence 999999988653
No 271
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-37 Score=349.61 Aligned_cols=204 Identities=25% Similarity=0.377 Sum_probs=175.9
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecCCC--Chh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLL--GLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1339 (1479)
.++++|++++|+. +++|+|+||+|++||.+||+|+||||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999964 4599999999999999999999999999999999999885 799999999999653 345
Q ss_pred hhhcceEEEcCccccccccHhhhcCCCC---CC-C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPIG---QY-S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~-s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
.+|++++++||++.+|..|+++|+.... .. + ++++.++++.+++.+.+... .......||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~q 154 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDD-------LKKSALKLSGGQQQ 154 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhH-------hhCCcccCCHHHHH
Confidence 6788999999999999999999996321 11 1 24567888888886543321 22345579999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++||||++++|+||||||||++||+.+...+.+.|++..++.|+|+|||+++.+.. ||||++|++|+
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~ 223 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGD 223 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCe
Confidence 999999999999999999999999999999999999988777899999999999877 99999999995
No 272
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-37 Score=352.13 Aligned_cols=206 Identities=27% Similarity=0.422 Sum_probs=175.0
Q ss_pred CccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCccEEEEcCEecCC--CC
Q 000463 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LG 1337 (1479)
Q Consensus 1265 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~ 1337 (1479)
.--++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 22 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 22 KVVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred ceEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 336999999999974 359999999999999999999999999999999999987 699999999999853 35
Q ss_pred hhhhhcceEEEcCccccccccHhhhcCCC---CCCC-----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchH
Q 000463 1338 LHDLRSRFGIIPQEPVLFEGTVRSNIDPI---GQYS-----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1338 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~s-----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
...+|++++++||+|.+|..|+++|+... ...+ ++.+.++++..++.+.+ +......+.+|||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l-------~~~~~~~~~~LSgGe 172 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDEL-------KDRLHDNAYGLSGGQ 172 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchH-------HHHHhcCcccCCHHH
Confidence 56788999999999999999999999631 1222 22345666666554322 223344566899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+++|+++.+.. ||||++|++|+
T Consensus 173 ~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~ 243 (271)
T PRK14238 173 QQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGY 243 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999998778999999999999876 99999999985
No 273
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.7e-36 Score=340.01 Aligned_cols=205 Identities=36% Similarity=0.542 Sum_probs=179.4
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1479)
.++++|+++.|++. .+++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 37899999999532 25699999999999999999999999999999999999999999999987 27
Q ss_pred EEEeccCcCCCCcHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCC
Q 000463 711 AYVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1479)
Q Consensus 711 ayv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 789 (1479)
+|++|+++++..|++||+.++... ++.+..+.++..++.+.++..|.|..|.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 999999998888999999887543 3334556677778888788888888888888899999999999999999999999
Q ss_pred EEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEec
Q 000463 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSG 850 (1479)
Q Consensus 790 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g 850 (1479)
++||||||++||+.+.+.+++.+.+. .+++|+|++||+++++..||++++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~-~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQL-LGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHh-cCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 99999999999999999998765544 3358999999999988779999999999997653
No 274
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.4e-37 Score=365.19 Aligned_cols=192 Identities=29% Similarity=0.389 Sum_probs=163.5
Q ss_pred CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------------eEEEEeccCcCCC
Q 000463 659 GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------------TTAYVAQTSWIQN 721 (1479)
Q Consensus 659 ~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------------~iayv~Q~~~i~~ 721 (1479)
++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++||+|++++++
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 35689999999999999999999999999999999999999999999987 3899999999986
Q ss_pred -CcHHHHHhcCCCCC---h-hhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCc
Q 000463 722 -GTIEENILFGLPMN---R-AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDV 796 (1479)
Q Consensus 722 -~Tv~enI~fg~~~~---~-~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep 796 (1479)
.||+|||.|+.++. . +..+++.+. ++.+. .....++++.+|||||||||+|||||+.+|+++|||||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~------l~~vg--L~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP 156 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALEL------LKLVG--LEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEA 156 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHH------HHhcC--CchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 69999999875431 1 222222222 22222 22346778899999999999999999999999999999
Q ss_pred cCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000463 797 FSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 797 ~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
||+||+.+++.+++.+.+... .|+|+|+|||+++++. .||+|++|++|++++.|+++++...
T Consensus 157 ~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 157 FSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999988776654 4899999999999875 5999999999999999999998764
No 275
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-37 Score=352.81 Aligned_cols=201 Identities=21% Similarity=0.356 Sum_probs=178.1
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
-.|+++|++++|+. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999974 3599999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEcCcccccc-ccHhhhcCCCC--------C---CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHH
Q 000463 1346 GIIPQEPVLFE-GTVRSNIDPIG--------Q---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1479)
Q Consensus 1346 ~iIpQdp~LF~-gTIR~NLdp~~--------~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1413 (1479)
+++||++.+|. .|+++|+.... . ..+++++++++..++.+..... ...||+|||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----------VDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----------cccCChHHHHHH
Confidence 99999998875 59999996421 1 1234678899999887654433 347999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1414 ~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+||||++++|++|||||||++||+++.+.+.+.|++..+ ++|+|+++|+++.+.+ ||||++|++|+
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~ 221 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGK 221 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999998643 7899999999999877 99999999985
No 276
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-37 Score=367.04 Aligned_cols=198 Identities=26% Similarity=0.404 Sum_probs=174.5
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.++++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999964 3599999999999999999999999999999999999999999999999999876653 56899
Q ss_pred EEcCccccccc-cHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHH
Q 000463 1347 IIPQEPVLFEG-TVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1479)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1418 (1479)
++||++.+|.. |+++|+... ...+ ++++.++++.+++.+.....| .+||||||||++||||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLAra 147 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGRT 147 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999975 999999632 1122 346788899999877665554 3689999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1419 LLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|+++|+||+|||||++||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|+
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~ 211 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGR 211 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999988653 7899999999999876 99999999995
No 277
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.1e-37 Score=315.46 Aligned_cols=193 Identities=25% Similarity=0.425 Sum_probs=163.9
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----------------
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------------- 708 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------- 708 (1479)
|+++|+++.|+.. .++|+||||+|++||++-|+||+||||||||++|.|+..|++|+|.++|
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7899999999753 6799999999999999999999999999999999999999999999988
Q ss_pred eEEEEeccCc-CCCCcHHHHHhcCCCC---ChhhHH----HHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHH
Q 000463 709 TTAYVAQTSW-IQNGTIEENILFGLPM---NRAKYG----EVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 709 ~iayv~Q~~~-i~~~Tv~enI~fg~~~---~~~~~~----~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1479)
+||+|+|+.- ++..||.||+.|.... .+..|+ ++++..+|..... .-+.+|||||||||+|
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~-----------~lP~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKAR-----------ALPSQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhh-----------cCccccCchHHHHHHH
Confidence 4899999975 4678999999997643 223332 2233333333332 3456899999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccC-CEEEEEeCCEEEEec
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNV-DLILVMREGMIVQSG 850 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~-D~i~~l~~G~i~~~g 850 (1479)
|||+..+|+++|-||||.+|||..+..|++.+.+....|.||+++|||.+.+... -+++.+++|+++...
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 9999999999999999999999999999976656667799999999999999875 899999999998643
No 278
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-37 Score=355.40 Aligned_cols=202 Identities=25% Similarity=0.399 Sum_probs=171.4
Q ss_pred EEEEeeeeeecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCC----Chhh
Q 000463 1268 VDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLL----GLHD 1340 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~~ 1340 (1479)
++++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997432 3599999999999999999999999999999999999999999999999998764 3567
Q ss_pred hhcceEEEcCcc--ccccccHhhhcCCC---CCCCHH----HHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1341 LRSRFGIIPQEP--VLFEGTVRSNIDPI---GQYSDE----EIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1341 LR~~i~iIpQdp--~LF~gTIR~NLdp~---~~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
+|++|+|+||+| .+|++|+++|+... ...+++ .+.++++..++.+.. ......+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESL----------FEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------hhCCcccCCHHHHH
Confidence 888999999998 68889999999631 122333 345666777765311 12234579999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++|||||+++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|+
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~ 222 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGK 222 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999864 37899999999999976 99999999985
No 279
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8e-37 Score=344.92 Aligned_cols=200 Identities=28% Similarity=0.461 Sum_probs=168.3
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh-hhcceE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD-LRSRFG 1346 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i~ 1346 (1479)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ--SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC--eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 578999999974 35999999999999999999999999999999999999999999999999998877655 467899
Q ss_pred EEcCccccccc-cHhhhcCCC-CC--CCHH-HHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhcc
Q 000463 1347 IIPQEPVLFEG-TVRSNIDPI-GQ--YSDE-EIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1479)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~-~~--~sd~-eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1421 (1479)
++||++.+|.+ |+++|+... .. ..++ ...++++..+. ++........+||||||||++|||||++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~----------l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV----------LKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh----------HHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999987 999999631 11 1222 23344444331 2222233445799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1422 ~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+|++|+|||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|+
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~ 209 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGR 209 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999998754 7899999999999986 99999999985
No 280
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-37 Score=346.10 Aligned_cols=203 Identities=31% Similarity=0.414 Sum_probs=166.3
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----------------
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------------- 708 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------- 708 (1479)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFG---GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 46899999995 34799999999999999999999999999999999999999999999876
Q ss_pred eEEEEeccCcCCC-CcHHHHHhcCCCC----ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHH
Q 000463 709 TTAYVAQTSWIQN-GTIEENILFGLPM----NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1479)
Q Consensus 709 ~iayv~Q~~~i~~-~Tv~enI~fg~~~----~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 783 (1479)
.++|++|++.++. .|++||+.++... +....++. ..+-++.+... .....+..+|||||||||+||||
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~--~~~~~~~~~LSgG~~qrv~ia~a 150 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREI-----VLEKLEAVGLR--GAEDLYPAELSGGMKKRVALARA 150 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHH-----HHHHHHHcCCc--hhhcCChhhCCHHHHHHHHHHHH
Confidence 2789999988766 5999999886321 11111111 11223333222 22356678999999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 784 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
++.+|+++||||||++||+.+.+.+++.+.+... .|+|+|++||+++++.. ||+|++|++|++++.|+++++..
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 151 LALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 9999999999999999999999999876655544 48999999999998865 99999999999999999888764
No 281
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=360.95 Aligned_cols=206 Identities=25% Similarity=0.366 Sum_probs=171.5
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------eEE
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------TTA 711 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~ia 711 (1479)
..|+++|+++.|+ +.++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++| .++
T Consensus 5 ~~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 81 (351)
T PRK11432 5 NFVVLKNITKRFG---SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDIC 81 (351)
T ss_pred cEEEEEeEEEEEC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 4689999999995 34689999999999999999999999999999999999999999999988 379
Q ss_pred EEeccCcCC-CCcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 712 YVAQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 712 yv~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
||+|++.++ +.||+|||.|+... +....++ ...+-++.+... .....++.+|||||||||+|||||+.+
T Consensus 82 ~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~~gl~--~~~~r~~~~LSgGq~QRVaLARaL~~~ 154 (351)
T PRK11432 82 MVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQ-----RVKEALELVDLA--GFEDRYVDQISGGQQQRVALARALILK 154 (351)
T ss_pred EEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHH-----HHHHHHHHcCCc--hhhcCChhhCCHHHHHHHHHHHHHHcC
Confidence 999999887 57999999998542 1111111 111222333222 223567789999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
|+++|||||||+||+..++.+.+.+.+...+ |+|+|+||||.+++. .||+|++|++|+|++.|+++++...
T Consensus 155 P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 155 PKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999998766655443 899999999999875 5899999999999999999998764
No 282
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.8e-37 Score=364.46 Aligned_cols=200 Identities=25% Similarity=0.428 Sum_probs=177.4
Q ss_pred CccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCc--cEEEEcCEecCCCChhhhh
Q 000463 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSG--GRIIIDGIDISLLGLHDLR 1342 (1479)
Q Consensus 1265 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~--G~I~IDG~dI~~i~l~~LR 1342 (1479)
.|.++++|++++|+. ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++ |+|.+||.++...+. .+
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 478999999999974 359999999999999999999999999999999999999999 999999999987665 35
Q ss_pred cceEEEcCccccccc-cHhhhcCC-C--CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1343 SRFGIIPQEPVLFEG-TVRSNIDP-I--GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1343 ~~i~iIpQdp~LF~g-TIR~NLdp-~--~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
++|++++|++.+|.. |+++|+.. . ...+ ++++.++++.++|.++..+.|. +||||||||++
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~~-----------~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLPA-----------QLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCChh-----------hCCHHHHHHHH
Confidence 789999999999976 99999963 1 1223 3457788999999887766663 58999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC---CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA---ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~---~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||+++|++|+||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~ 216 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGR 216 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999988654 6899999999999876 99999999996
No 283
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-37 Score=356.76 Aligned_cols=204 Identities=26% Similarity=0.370 Sum_probs=171.6
Q ss_pred CccEEEEeeeeeecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCC----C-
Q 000463 1265 HGNVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL----L- 1336 (1479)
Q Consensus 1265 ~g~I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~----i- 1336 (1479)
.|.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 47899999999997532 259999999999999999999999999999999999999999999999999852 2
Q ss_pred ChhhhhcceEEEcCcc--ccccccHhhhcCCCC---CCCHH----HHHHHHHHcCch-HHHHhCcCCccccccCCCCCCC
Q 000463 1337 GLHDLRSRFGIIPQEP--VLFEGTVRSNIDPIG---QYSDE----EIWKSLERCQLK-DVVAAKPDKLDSLVADSGDNWS 1406 (1479)
Q Consensus 1337 ~l~~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sd~----eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLS 1406 (1479)
+...+|++++++||+| .+|..|+++|+.... ..+.+ .+.++++..++. +.. .....+||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~-----------~~~~~~LS 152 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYV-----------KRSPFELS 152 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHh-----------cCChhhCC
Confidence 4567888999999998 477889999996321 12332 344566666652 222 22345799
Q ss_pred chHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1407 gGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|+
T Consensus 153 ~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~ 228 (289)
T PRK13645 153 GGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGK 228 (289)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999998753 7899999999999866 99999999985
No 284
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=348.41 Aligned_cols=199 Identities=24% Similarity=0.407 Sum_probs=175.6
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++++++
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (258)
T PRK13548 3 LEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAV 80 (258)
T ss_pred EEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEE
Confidence 789999999964 459999999999999999999999999999999999999999999999999988888888889999
Q ss_pred EcCcccc-ccccHhhhcCCCC--C-C----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVL-FEGTVRSNIDPIG--Q-Y----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~L-F~gTIR~NLdp~~--~-~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||++.+ +..|+++|+.... . . .++++.++++..++.+.....+ ..||||||||++|||||
T Consensus 81 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgGe~qrv~la~al 149 (258)
T PRK13548 81 LPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDY-----------PQLSGGEQQRVQLARVL 149 (258)
T ss_pred EccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999987 6779999996321 1 1 2346788899988876544432 46899999999999999
Q ss_pred c------cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 L------KHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 L------r~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+ ++|++|+|||||++||+.+.+.+.+.|++.. ++.|||++||+++.+.. ||+|++|++|+
T Consensus 150 ~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 218 (258)
T PRK13548 150 AQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGR 218 (258)
T ss_pred hcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCE
Confidence 9 5999999999999999999999999999864 47899999999999975 99999999985
No 285
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.1e-36 Score=351.45 Aligned_cols=200 Identities=23% Similarity=0.381 Sum_probs=173.3
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChh---hhhc
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH---DLRS 1343 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR~ 1343 (1479)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5899999999963 4599999999999999999999999999999999999999999999999999876543 3578
Q ss_pred ceEEEcCccccccc-cHhhhcCC----CCCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1344 RFGIIPQEPVLFEG-TVRSNIDP----IGQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1344 ~i~iIpQdp~LF~g-TIR~NLdp----~~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
+++++||++.+|.+ |+++|+.. ....+ ++++.++++..++.+.....+ .+||||||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qrv~ 153 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMP-----------SELSGGMARRAA 153 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999987 99999962 11122 235667788888765443332 468999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|+
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~ 221 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKK 221 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCE
Confidence 99999999999999999999999999999999998643 7899999999999977 99999999985
No 286
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-37 Score=350.88 Aligned_cols=202 Identities=25% Similarity=0.390 Sum_probs=174.3
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecCC--CCh
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISL--LGL 1338 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~l 1338 (1479)
+.++++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. ...
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 46999999999964 3599999999999999999999999999999999999985 48999999999864 345
Q ss_pred hhhhcceEEEcCccccccccHhhhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1339 HDLRSRFGIIPQEPVLFEGTVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
..+|++++++||+|.+|..|+++|+... +... ++.+.++++.+++.+.+... + ......||+|||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~----~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDK---L----NKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhH---h----cCCcccCCHHHH
Confidence 6788899999999999999999999631 1112 24467888888886554322 2 234567999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEe
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVD 1476 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~ 1476 (1479)
||++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||+|||+++.+.+ |||+++|+
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~ 223 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFS 223 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEe
Confidence 9999999999999999999999999999999999999998777999999999999987 99999997
No 287
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-37 Score=346.94 Aligned_cols=197 Identities=26% Similarity=0.423 Sum_probs=174.7
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+++|++++|+. ..+++|+||+|++||++||+|+||||||||+++|+|+++|.+|+|.+||.++...+. .++.+++
T Consensus 1 l~~~~l~~~~~~--~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGG--FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 578999999974 359999999999999999999999999999999999999999999999999987654 3678999
Q ss_pred EcCccccccc-cHhhhcCCC-C------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFEG-TVRSNIDPI-G------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~-~------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||+|.+|.+ |+++|+... . ...++++.++++..++.++....| .+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~laral 145 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARAL 145 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999999976 999999621 1 112457788899999887776655 36899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|++|||||||++||..+.+.+.+.|++..+ ++|+|+++|+++.+.. ||||++|++|+
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~ 208 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGK 208 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999998653 7999999999999876 99999999985
No 288
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=9.2e-37 Score=359.67 Aligned_cols=202 Identities=26% Similarity=0.417 Sum_probs=172.9
Q ss_pred cEEEEeeeeeecCC-----------CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCC
Q 000463 1267 NVDLIDLQVRYRSN-----------TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL 1335 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~-----------~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~ 1335 (1479)
-++++|++++|+.+ ...+++||||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 58999999999631 2459999999999999999999999999999999999999999999999999998
Q ss_pred CChhh---hhcceEEEcCcc--ccc-cccHhhhcCC----CC-CCCH----HHHHHHHHHcCchH-HHHhCcCCcccccc
Q 000463 1336 LGLHD---LRSRFGIIPQEP--VLF-EGTVRSNIDP----IG-QYSD----EEIWKSLERCQLKD-VVAAKPDKLDSLVA 1399 (1479)
Q Consensus 1336 i~l~~---LR~~i~iIpQdp--~LF-~gTIR~NLdp----~~-~~sd----~eI~~aL~~~~L~~-~i~~lp~gLdt~v~ 1399 (1479)
++.++ +|++|++|+||| .++ ..||++|+.. +. ..+. +.+.++++.+++.+ ...+.
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~--------- 158 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRY--------- 158 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCC---------
Confidence 87554 678999999999 477 4699999841 11 2333 34567788888843 32322
Q ss_pred CCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEe
Q 000463 1400 DSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVD 1476 (1479)
Q Consensus 1400 e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~ 1476 (1479)
..+||||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||+
T Consensus 159 --p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~ 236 (331)
T PRK15079 159 --PHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMY 236 (331)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 346899999999999999999999999999999999999999999988653 7899999999999987 99999999
Q ss_pred CCC
Q 000463 1477 AGL 1479 (1479)
Q Consensus 1477 ~G~ 1479 (1479)
+|+
T Consensus 237 ~G~ 239 (331)
T PRK15079 237 LGH 239 (331)
T ss_pred CCE
Confidence 985
No 289
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=352.68 Aligned_cols=209 Identities=25% Similarity=0.423 Sum_probs=169.8
Q ss_pred cEEEEeeEEEecCCC--CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000463 644 AVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1479)
.++++|+++.|+... .+++|+||||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 478999999996422 24799999999999999999999999999999999999999999999877
Q ss_pred --eEEEEeccC--cCCCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHH
Q 000463 709 --TTAYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1479)
Q Consensus 709 --~iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1479)
.++|++|+| .+++.|++|||.|+.. .+.+...+. ..+-++.+...+.+...+++.+||||||||++||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iA 156 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIA 156 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHcCCCchhhccCCcccCCHHHHHHHHHH
Confidence 269999997 5678899999998642 121111111 1122333322211234567889999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000463 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 782 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|||+.+|+++||||||++||+.+++.+++.+.+...+ |+|+|++||+++++. .||+|++|++|++++.|+.+++.+
T Consensus 157 raL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 157 GVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred HHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999998765555444 899999999999985 599999999999999999988764
No 290
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=353.94 Aligned_cols=202 Identities=31% Similarity=0.474 Sum_probs=172.1
Q ss_pred cEEEEeeeeeecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCC----Chh
Q 000463 1267 NVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLL----GLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~ 1339 (1479)
.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999997422 3599999999999999999999999999999999999999999999999998653 245
Q ss_pred hhhcceEEEcCcc--ccccccHhhhcCCC---CCCC----HHHHHHHHHHcCch-HHHHhCcCCccccccCCCCCCCchH
Q 000463 1340 DLRSRFGIIPQEP--VLFEGTVRSNIDPI---GQYS----DEEIWKSLERCQLK-DVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp--~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
..|++++++||+| .+|..|+++|+... ...+ ++.+.++++.+++. ++... ...+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISK-----------SPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhC-----------CcccCCHHH
Confidence 6788999999998 57888999999521 1222 23467778888775 33222 234799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. ++.|||++||+++.+.. ||||++|++|+
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~ 222 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGK 222 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999864 47899999999999876 99999999985
No 291
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=345.22 Aligned_cols=200 Identities=25% Similarity=0.392 Sum_probs=168.7
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh-hhcce
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD-LRSRF 1345 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i 1345 (1479)
-++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+..+ .|+++
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999964 45999999999999999999999999999999999999999999999999998887654 67889
Q ss_pred EEEcCccccccc-cHhhhcCCCCC-CC----HHHHHHHHHHc-CchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHH
Q 000463 1346 GIIPQEPVLFEG-TVRSNIDPIGQ-YS----DEEIWKSLERC-QLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1479)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~~-~s----d~eI~~aL~~~-~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1418 (1479)
+++||++.+|.+ |+++|+..... .+ ++++.++++.. ++.+. .......||+|||||++||||
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~a 151 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHER-----------RIQRAGTMSGGEQQMLAIGRA 151 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHHH-----------HhCchhhCCHHHHHHHHHHHH
Confidence 999999999986 99999964211 12 22334444443 23221 122345799999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1419 LLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
++++|+||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||||++|++|+
T Consensus 152 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 214 (237)
T PRK11614 152 LMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGH 214 (237)
T ss_pred HHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCE
Confidence 999999999999999999999999999998864 47999999999998766 99999999985
No 292
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=9.9e-37 Score=348.59 Aligned_cols=200 Identities=27% Similarity=0.415 Sum_probs=171.2
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCC--------h
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG--------L 1338 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~--------l 1338 (1479)
-++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 3899999999964 35999999999999999999999999999999999999999999999999987542 3
Q ss_pred hhhhcceEEEcCcccccc-ccHhhhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchH
Q 000463 1339 HDLRSRFGIIPQEPVLFE-GTVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
..+|++++++||+|.+|. .|+++|+... .... ++.+.++++..++.+... ....+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKET-----------SYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhh-----------CChhhCChHH
Confidence 467889999999999886 6999999631 1222 234666777777654322 2345799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|+
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 221 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGR 221 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999999998865 37899999999999976 99999999985
No 293
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=8.2e-37 Score=357.53 Aligned_cols=198 Identities=24% Similarity=0.419 Sum_probs=175.5
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++++
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999963 459999999999999999999999999999999999999999999999999976 44678899999
Q ss_pred EcCccccccc-cHhhhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFEG-TVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||+|.+|.+ |+++||.... ..+ ++++.++++..++.+..... ..+||+|||||++|||||
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qrv~la~al 148 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKK-----------IGQLSKGYRQRVGLAQAL 148 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcCc-----------hhhCCHHHHHHHHHHHHH
Confidence 9999999977 9999996321 122 35677788888877654322 347999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|++|+|||||++||+.+.+.+++.|++..+++|||+++|+++.+.+ ||||++|++|+
T Consensus 149 ~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 149 IHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999998778999999999999987 99999999995
No 294
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=8.4e-37 Score=358.02 Aligned_cols=199 Identities=28% Similarity=0.420 Sum_probs=171.2
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999964 3599999999999999999999999999999999999999999999999998754 356789999
Q ss_pred EEcCcccccc-ccHhhhcCCC---CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHH
Q 000463 1347 IIPQEPVLFE-GTVRSNIDPI---GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1479)
Q Consensus 1347 iIpQdp~LF~-gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1418 (1479)
++||++.+|. .|+++|+..+ ...++ +++.++++.+++.+.. +..+ .+||||||||++||||
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~-------~~~~----~~LSgG~~qrv~la~a 149 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKA-------DVRV----ALLSGGMKRRLTLARA 149 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHh-------cCch----hhCCHHHHHHHHHHHH
Confidence 9999999885 5999999621 12333 2345567777765433 3333 3699999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1419 LLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|+++|++|||||||++||+.+.+.+.+.|++.. +++|||+++|+++.+.+ ||||++|++|+
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999864 47899999999999976 99999999995
No 295
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=348.79 Aligned_cols=204 Identities=27% Similarity=0.375 Sum_probs=175.8
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecCCC--Chh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLL--GLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1339 (1479)
-|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 4899999999963 3599999999999999999999999999999999999763 489999999999876 456
Q ss_pred hhhcceEEEcCccccccccHhhhcCCCC---C-C----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPIG---Q-Y----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
..|++++++||+|.+|.+|+++|+.... . . .++++.++++.+++.+.+. +.....+.+||+||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~q 156 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVK-------DRLHDSALSLSGGQQQ 156 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhH-------HHhhcChhhCCHHHHH
Confidence 7788999999999999999999997321 1 1 1345677777777754432 2234456689999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++||||++.+|+++||||||++||.++.+.+.+.|++..+++|||+++|+++.+.. ||+|++|++|+
T Consensus 157 rv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~ 225 (253)
T PRK14261 157 RLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGK 225 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCE
Confidence 999999999999999999999999999999999999988777999999999999976 99999999985
No 296
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.3e-36 Score=362.68 Aligned_cols=199 Identities=24% Similarity=0.433 Sum_probs=177.5
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
..++++|++++|.. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++..++.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 35999999999964 3589999999999999999999999999999999999999999999999999877654 4689
Q ss_pred EEEcCccccccc-cHhhhcCC-CC--CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1346 GIIPQEPVLFEG-TVRSNIDP-IG--QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp-~~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
++++|++.+|.. ||++||.. .. ..+ ++++.++++..++.++....|. .||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~-----------~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKPH-----------QLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCChh-----------hCCHHHHHHHHHHH
Confidence 999999999976 99999963 21 223 3467888999999888777763 58999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+.+.+.. ||||++|++|+
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~ 222 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGR 222 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999998764 7899999999999876 99999999996
No 297
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=344.72 Aligned_cols=200 Identities=27% Similarity=0.503 Sum_probs=170.9
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh-hhcce
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD-LRSRF 1345 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i 1345 (1479)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 3889999999963 35999999999999999999999999999999999999999999999999998877654 57889
Q ss_pred EEEcCccccccc-cHhhhcCCCC----CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1346 GIIPQEPVLFEG-TVRSNIDPIG----QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~----~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
+++||++.+|.+ |+++|+.... ..+ ++.+.+.++..++.+. .......||||||||++||
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la 149 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHL-----------RDSMGQSLSGGERRRVEIA 149 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHH-----------hhcchhhCCHHHHHHHHHH
Confidence 999999998875 9999997431 122 2345556666665443 2233457999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++++|++|||||||++||+.+...+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~ 214 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGH 214 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCe
Confidence 99999999999999999999999999999998764 47899999999988866 99999999986
No 298
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=357.78 Aligned_cols=203 Identities=25% Similarity=0.426 Sum_probs=172.8
Q ss_pred cEEEEeeeeeecCC--------CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCCh
Q 000463 1267 NVDLIDLQVRYRSN--------TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL 1338 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~--------~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l 1338 (1479)
-|+++|++++|+.. ...+|+||||+|++||++||||+||||||||+++|.|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 48999999999631 2469999999999999999999999999999999999999999999999999988865
Q ss_pred h---hhhcceEEEcCccc--cccc-cHhhhcC-CC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCC
Q 000463 1339 H---DLRSRFGIIPQEPV--LFEG-TVRSNID-PI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN 1404 (1479)
Q Consensus 1339 ~---~LR~~i~iIpQdp~--LF~g-TIR~NLd-p~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1404 (1479)
+ .+|++|++|||||. |+.. |+.+|+. +. ...+ .+++.++|+++++.+. .++.. ...
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~------~~~~~----p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPE------HYDRY----PHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChH------HhcCC----Ccc
Confidence 4 56789999999994 5543 8888874 11 1122 3567888999988532 22322 246
Q ss_pred CCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1405 WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1405 LSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||||||++|||||+.+|+|||+||||++||..+.+.|.+.|++..+ ++|+|+|||+++.+.. ||||+||++|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ 232 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGR 232 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998653 7899999999999986 99999999995
No 299
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=348.80 Aligned_cols=201 Identities=28% Similarity=0.437 Sum_probs=173.7
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCccEEEEcCEecCC--CChh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LGLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1339 (1479)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGS--FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECC--EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 4899999999964 359999999999999999999999999999999999986 479999999999853 4556
Q ss_pred hhhcceEEEcCccccccccHhhhcCCCC---CC---CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPIG---QY---SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1413 (1479)
.+|++++++||+|.+|..|+++|+.... .. .++++.++++.+++.+.+... ......+||||||||+
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDK-------LKQSGLSLSGGQQQRL 160 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHH-------hcCCcccCCHHHHHHH
Confidence 7889999999999999899999996421 11 234566778888887655321 2334568999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEe
Q 000463 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVD 1476 (1479)
Q Consensus 1414 ~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~ 1476 (1479)
+|||||+++|+||||||||++||+++...+.+.|++..+++|||++||+++.+.. ||||++|+
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~ 224 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFN 224 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEe
Confidence 9999999999999999999999999999999999988777899999999999876 99999998
No 300
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.4e-36 Score=348.39 Aligned_cols=199 Identities=25% Similarity=0.411 Sum_probs=175.1
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 689999999964 359999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EcCccc-cccccHhhhcCCCC----C-------CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHH
Q 000463 1348 IPQEPV-LFEGTVRSNIDPIG----Q-------YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCL 1415 (1479)
Q Consensus 1348 IpQdp~-LF~gTIR~NLdp~~----~-------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1415 (1479)
+||+|. .+..|+++|+.... . ..++++.++++++++.+..... ...||+|||||++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~l 148 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRD-----------MSTLSGGERQRVHV 148 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCC-----------cccCCHHHHHHHHH
Confidence 999995 45679999995321 0 1234678889998887654332 34699999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1416 GRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1416 ARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~-~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||++.+|+++||||||++||+.+...+.+.|++..+ +.|+|+++|+++.+.. ||||++|++|+
T Consensus 149 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 214 (256)
T TIGR03873 149 ARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGR 214 (256)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999999999999998643 6899999999999965 99999999986
No 301
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.5e-36 Score=349.73 Aligned_cols=202 Identities=28% Similarity=0.435 Sum_probs=171.5
Q ss_pred EEEEeeeeeecCC-------CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhh
Q 000463 1268 VDLIDLQVRYRSN-------TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD 1340 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~-------~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~ 1340 (1479)
++++|++++|+.. ...+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.++
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999642 346999999999999999999999999999999999999999999999999998876544
Q ss_pred ---hhcceEEEcCccc--cc-cccHhhhcCC----CCC----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCC
Q 000463 1341 ---LRSRFGIIPQEPV--LF-EGTVRSNIDP----IGQ----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWS 1406 (1479)
Q Consensus 1341 ---LR~~i~iIpQdp~--LF-~gTIR~NLdp----~~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1406 (1479)
+|++++++||+|. ++ ..|+++|+.. ... ..++++.++++..++.+.. + .....+||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~------~----~~~~~~LS 152 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSED------A----DKLPRQLS 152 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh------h----hCChhhCC
Confidence 6788999999983 44 4699999841 111 1245677888888775321 1 22345799
Q ss_pred chHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1407 gGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||||++|||||+.+|+||||||||++||+++.+.+.+.|++..+ +.|||+|+|+++.+.. ||+|++|++|+
T Consensus 153 gGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 228 (265)
T TIGR02769 153 GGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQ 228 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCE
Confidence 9999999999999999999999999999999999999999998653 7899999999999986 99999999985
No 302
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=353.41 Aligned_cols=207 Identities=23% Similarity=0.385 Sum_probs=168.0
Q ss_pred EEEEeeEEEecCCC--CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000463 645 VEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1479)
Q Consensus 645 i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1479)
++++|++++|++.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|.
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996422 246999999999999999999999999999999999999999999999872
Q ss_pred ----EEEEeccC--cCCCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHH
Q 000463 710 ----TAYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 710 ----iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1479)
++||+|+| .+++.||+|||.|+.. .+....++. ..+-++.+.... .....++.+|||||||||+|
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~-~~~~~~~~~LSgGq~qrv~l 156 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQK-----AREMIELVGLPE-ELLARSPFELSGGQMRRVAI 156 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHCCCCh-hhhhCCcccCCHHHHHHHHH
Confidence 79999997 5778899999998742 121111111 112222222110 11245678999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
||||+.+|+++||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++++.. ||+|++|++|++++.|+++++.+
T Consensus 157 AraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 157 AGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999998766555444 8999999999999864 99999999999999999988764
No 303
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-36 Score=350.09 Aligned_cols=204 Identities=25% Similarity=0.409 Sum_probs=175.1
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecCCCC-hhh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLLG-LHD 1340 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i~-l~~ 1340 (1479)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 5899999999964 4599999999999999999999999999999999999986 6999999999998663 456
Q ss_pred hhcceEEEcCccccccccHhhhcCCC----CCCCHHHH----HHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHH
Q 000463 1341 LRSRFGIIPQEPVLFEGTVRSNIDPI----GQYSDEEI----WKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1479)
Q Consensus 1341 LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~sd~eI----~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1412 (1479)
+|++++|+||+|.+|..|+++|+... ...+++++ .++++.+++.+.. ++.+.....+||+|||||
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LSgGq~qr 171 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAV-------KDRLSDSPFRLSGGQQQL 171 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhCCcccCCHHHHHH
Confidence 78999999999999999999999632 12344443 4556666665432 122334566899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1413 l~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
++|||||+++|+||||||||++||..+.+.+.+.|++..+++|||+|+|+++.+.+ ||||++|++|+
T Consensus 172 l~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~ 239 (276)
T PRK14271 172 LCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGR 239 (276)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999987667999999999999876 99999999985
No 304
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=346.77 Aligned_cols=204 Identities=27% Similarity=0.414 Sum_probs=175.9
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecC-CCChhh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDIS-LLGLHD 1340 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~-~i~l~~ 1340 (1479)
.++++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4889999999973 4599999999999999999999999999999999999986 5999999999985 456677
Q ss_pred hhcceEEEcCccccccccHhhhcCCC---CCC-C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHH
Q 000463 1341 LRSRFGIIPQEPVLFEGTVRSNIDPI---GQY-S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1479)
Q Consensus 1341 LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~-s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1412 (1479)
+|+.++++||+|.+|.+|+++|+... ... + ++++.++++.+++.+.+. .........||+|||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~qr 153 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQR 153 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHHH
Confidence 89999999999999999999999632 111 1 235567788887765432 12233445799999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1413 l~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||||++|++|+
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~ 221 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGE 221 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999998777999999999999887 99999999995
No 305
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.3e-36 Score=360.99 Aligned_cols=205 Identities=30% Similarity=0.405 Sum_probs=172.8
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EEE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TAY 712 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------iay 712 (1479)
.++++|++++|+ +..+|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|+ ++|
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~ 80 (353)
T TIGR03265 4 YLSIDNIRKRFG---AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGI 80 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 589999999995 246899999999999999999999999999999999999999999999883 899
Q ss_pred EeccCcCC-CCcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCC
Q 000463 713 VAQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1479)
Q Consensus 713 v~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 788 (1479)
|+|++-++ +.||+|||.|+... +....++ ..++-++.+... .....++.+|||||||||+|||||+.+|
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~l~L~--~~~~~~~~~LSgGq~QRvaLARaL~~~P 153 (353)
T TIGR03265 81 VFQSYALFPNLTVADNIAYGLKNRGMGRAEVAE-----RVAELLDLVGLP--GSERKYPGQLSGGQQQRVALARALATSP 153 (353)
T ss_pred EeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCC--chhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999887 57999999998532 1111111 122334444322 2345788899999999999999999999
Q ss_pred CEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000463 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 789 ~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
+++|||||||+||+.+++++.+.+.+...+ |.|+|+||||.+++. .||+|++|++|++++.|+++++.+.
T Consensus 154 ~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 154 GLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999998777665544 899999999999875 4999999999999999999999864
No 306
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=349.86 Aligned_cols=208 Identities=27% Similarity=0.418 Sum_probs=169.7
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1479)
.++++|++++|++....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 58999999999643334699999999999999999999999999999999999999999999988 26
Q ss_pred EEEeccCc--CCCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHh
Q 000463 711 AYVAQTSW--IQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1479)
Q Consensus 711 ayv~Q~~~--i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 785 (1479)
+|++|+|. ++..||+|||.|+.. .+++...+. ..+-++.+.. .......+.+||||||||++||||++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~gL--~~~~~~~~~~LSgGq~qrv~lAral~ 156 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKER-----VNEALELVGM--QDFKEREPARLSGGQKQRVAIAGAVA 156 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHH-----HHHHHHHCCC--HhHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999984 567899999998743 122111111 1112222221 12234567899999999999999999
Q ss_pred cCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhc
Q 000463 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 786 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
.+|+++||||||++||+.+.+.+++.+.+...+ |+|+|++||+++.+..||+|++|++|+++..|+++++...
T Consensus 157 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 157 MRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999998766555444 8999999999999877999999999999999998887643
No 307
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=347.26 Aligned_cols=200 Identities=26% Similarity=0.421 Sum_probs=171.0
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhh-hcce
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL-RSRF 1345 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~i 1345 (1479)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5899999999963 459999999999999999999999999999999999999999999999999988876665 4569
Q ss_pred EEEcCccccccc-cHhhhcCCCCC----------------C--C----HHHHHHHHHHcCchHHHHhCcCCccccccCCC
Q 000463 1346 GIIPQEPVLFEG-TVRSNIDPIGQ----------------Y--S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSG 1402 (1479)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~~----------------~--s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1402 (1479)
+++||+|.+|.+ |+++|+..... . . .+++.++++..++.+.. ....
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~ 151 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHA-----------NRQA 151 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhh-----------hCCh
Confidence 999999999986 99999973210 0 0 12345556666554432 3344
Q ss_pred CCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1403 DNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1403 ~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
.+||+|||||++||||++.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+++|+++.+.+ ||+|++|++|+
T Consensus 152 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 231 (255)
T PRK11300 152 GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGT 231 (255)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 57999999999999999999999999999999999999999999988643 7899999999999977 99999999985
No 308
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-36 Score=354.00 Aligned_cols=207 Identities=28% Similarity=0.460 Sum_probs=177.6
Q ss_pred CCccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCccEEEEcCEecCCC--
Q 000463 1264 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISLL-- 1336 (1479)
Q Consensus 1264 ~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~i-- 1336 (1479)
.+..|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...
T Consensus 42 ~~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~ 119 (305)
T PRK14264 42 GDAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGV 119 (305)
T ss_pred CCceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccc
Confidence 3446999999999974 359999999999999999999999999999999999986 6899999999998753
Q ss_pred ChhhhhcceEEEcCccccccccHhhhcCCC-C-------------------CCCHHHHHHHHHHcCchHHHHhCcCCccc
Q 000463 1337 GLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-G-------------------QYSDEEIWKSLERCQLKDVVAAKPDKLDS 1396 (1479)
Q Consensus 1337 ~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~-------------------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt 1396 (1479)
+...+|++++|+||++.+|.+|+++|+... . +..++++.++++.+++.+.+. .
T Consensus 120 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~ 192 (305)
T PRK14264 120 NLVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVN-------D 192 (305)
T ss_pred cHHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhh-------H
Confidence 456788999999999999999999999631 0 012455778888887754332 2
Q ss_pred cccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEE-EE
Q 000463 1397 LVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRV-IV 1474 (1479)
Q Consensus 1397 ~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrI-lV 1474 (1479)
.......+||||||||++|||||+++|+||||||||++||+.+...+.+.|++..++.|+|+|+|+++.+.. |||| ++
T Consensus 193 ~~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~ 272 (305)
T PRK14264 193 RLDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVF 272 (305)
T ss_pred HhcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEE
Confidence 334456789999999999999999999999999999999999999999999998777899999999999877 9997 56
Q ss_pred EeCCC
Q 000463 1475 VDAGL 1479 (1479)
Q Consensus 1475 L~~G~ 1479 (1479)
|++|+
T Consensus 273 l~~G~ 277 (305)
T PRK14264 273 LTGGE 277 (305)
T ss_pred ecCCE
Confidence 79885
No 309
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.9e-36 Score=343.10 Aligned_cols=197 Identities=27% Similarity=0.450 Sum_probs=172.9
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+++|++++|+. +.+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 i~i~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGS--FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECC--eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 578999999974 359999999999999999999999999999999999999999999999999986543 4788999
Q ss_pred EcCccccccc-cHhhhcCCCC---CC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFEG-TVRSNIDPIG---QY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~~---~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||+|.+|.+ |+++|+.... .. .++++.+++++.++.+.....+ .+||+||+||++||||+
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~laral 145 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYP-----------NQLSGGQRQRVALARAL 145 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999999976 9999996321 11 2456778888888876654433 46999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|++++|||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|+
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~ 208 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGK 208 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCE
Confidence 999999999999999999999999999998654 7899999999999877 99999999985
No 310
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-36 Score=348.77 Aligned_cols=202 Identities=27% Similarity=0.402 Sum_probs=174.1
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecCC--CCh
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISL--LGL 1338 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~l 1338 (1479)
-.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 19 SVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred ceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 36999999999974 3599999999999999999999999999999999999863 69999999999864 344
Q ss_pred hhhhcceEEEcCccccccccHhhhcCCCC---C---CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHH
Q 000463 1339 HDLRSRFGIIPQEPVLFEGTVRSNIDPIG---Q---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1479)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1412 (1479)
..+|++++++||++.+|.+|+++|+.... . ..++++.++++.+++.+.+... + ......||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~----~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKDK---L----KEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHHH---h----cCCcccCCHHHHHH
Confidence 56789999999999999899999996421 1 1245567788888886554321 2 23456799999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEe
Q 000463 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVD 1476 (1479)
Q Consensus 1413 l~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~ 1476 (1479)
++|||||+++|+||||||||++||..+...+.+.|++..+++|||+|+|+++.+.. ||||++|+
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~ 234 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFN 234 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999998778999999999999976 99999997
No 311
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-36 Score=340.17 Aligned_cols=195 Identities=25% Similarity=0.436 Sum_probs=172.4
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+. . ..|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .++++++
T Consensus 2 l~~~~l~~~~~~--~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHH--L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECC--c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 689999999963 2 249999999999999999999999999999999999999999999999886644 3578999
Q ss_pred EcCccccccc-cHhhhcCC-CC-C-----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFEG-TVRSNIDP-IG-Q-----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp-~~-~-----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||+|.+|.+ |+++|+.. +. . ..++++.++++.+++.+.+...|. .||+|||||++||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~G~~qrv~laral 144 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLPG-----------QLSGGQRQRVALARCL 144 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCcc-----------cCCHHHHHHHHHHHHH
Confidence 9999999986 99999963 21 1 124678999999999887776653 5899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|++|||||||++||.++.+.+.+.|++..+ ++|+|+++|+++.+.. ||||++|++|+
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 207 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGR 207 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999998753 7899999999999876 99999999985
No 312
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-36 Score=350.35 Aligned_cols=210 Identities=24% Similarity=0.398 Sum_probs=169.1
Q ss_pred EEEEeeEEEecCCC--CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000463 645 VEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1479)
Q Consensus 645 i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1479)
|+++|++|+|+... .+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|.
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999996322 136999999999999999999999999999999999999999999999872
Q ss_pred ----EEEEeccC--cCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHH
Q 000463 710 ----TAYVAQTS--WIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1479)
Q Consensus 710 ----iayv~Q~~--~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 783 (1479)
++|++|+| .++..|+.||+.|+.........+..+ ...+-++.+... .....+.+.+||||||||++||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~~L~-~~~~~~~~~~LSgGqkqrvaiA~a 158 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK--IAAEKLEMVGLA-DEFWEKSPFELSGGQMRRVAIAGI 158 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH--HHHHHHHHcCCC-hhhccCCcccCCHHHHHHHHHHHH
Confidence 68999998 677889999999874311000111111 112223333221 112356778999999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000463 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 784 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|+.+|+++||||||++||+.+++.+.+.+.+...+|+|+|++||+++++. .||+|++|++|++++.|+++++..
T Consensus 159 L~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 159 LAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred HHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 99999999999999999999999998765444446899999999999986 599999999999999999998864
No 313
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=350.18 Aligned_cols=200 Identities=26% Similarity=0.435 Sum_probs=172.8
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCC--CChhhhhcce
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL--LGLHDLRSRF 1345 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~--i~l~~LR~~i 1345 (1479)
++++|++++|+.+ +++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.+++. .+...+|++|
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 6899999999633 359999999999999999999999999999999999999999999999999852 2345678999
Q ss_pred EEEcCcc--ccccccHhhhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1346 GIIPQEP--VLFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1346 ~iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
+++||+| .+|..|+++|+.... ..+ .+++.++++.+++.++.... ..+||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LS~Gq~qrv~la 149 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKP-----------PHHLSGGQKKRVAIA 149 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCC-----------hhhCCHHHHHHHHHH
Confidence 9999998 578899999995211 122 24577888888886554332 236999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++++|++|||||||++||+.+...+.+.|++.. ++.|||+++|+++.+.. ||||++|++|+
T Consensus 150 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~ 214 (275)
T PRK13639 150 GILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGK 214 (275)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999875 37899999999999986 99999999985
No 314
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=350.61 Aligned_cols=199 Identities=26% Similarity=0.386 Sum_probs=171.6
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecC--CCChhhhhcce
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDIS--LLGLHDLRSRF 1345 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~--~i~l~~LR~~i 1345 (1479)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 689999999963 35999999999999999999999999999999999999999999999999985 33456778899
Q ss_pred EEEcCccc--cccccHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1346 GIIPQEPV--LFEGTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1346 ~iIpQdp~--LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
+++||+|. +|..|+.+|+... ...+ .+++.++++..++.++.... ..+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrl~la 148 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQP-----------IQCLSHGQKKRVAIA 148 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcCC-----------chhCCHHHHHHHHHH
Confidence 99999985 6778999998631 1122 23466788888886654322 347999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||+.+|+||||||||++||+.+...+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|+
T Consensus 149 raL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~ 213 (271)
T PRK13638 149 GALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQ 213 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999864 47899999999999976 99999999985
No 315
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.6e-36 Score=351.60 Aligned_cols=200 Identities=31% Similarity=0.561 Sum_probs=177.9
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.++++|++.+|.. ...+|+||||+|++||.+|++||||||||||+++|.|+++|++|+|.++|.|...- ..+.|+++|
T Consensus 4 ~i~~~~l~k~~~~-~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG-DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC-CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 4788999999973 24599999999999999999999999999999999999999999999999998755 678899999
Q ss_pred EEcCccccccc-cHhhhcCCCC-------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHH
Q 000463 1347 IIPQEPVLFEG-TVRSNIDPIG-------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1479)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~~-------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1418 (1479)
|+||+|.+++. |++|||+.+. ...++++.+.++..+|.+.- +..+ ..||+|||||+.||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-------~~~~----~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-------NKKV----RTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-------Ccch----hhcCHHHHHHHHHHHH
Confidence 99999998877 9999997532 12357899999999998732 2222 3589999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-C-cEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-A-CTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1419 LLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~-~-~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|+.+|++|||||||++||+.+...+.+.|++..+ + +||++.||.++.+.. ||||++|++|+
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~ 214 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGK 214 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999876 4 699999999999998 99999999995
No 316
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.5e-36 Score=329.85 Aligned_cols=171 Identities=27% Similarity=0.526 Sum_probs=156.0
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCCh-hhhhcce
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL-HDLRSRF 1345 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l-~~LR~~i 1345 (1479)
.++++|++++| +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999998 8999999999999999999999999999999999999999999999999988864 4568899
Q ss_pred EEEcCcc----ccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhcc
Q 000463 1346 GIIPQEP----VLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1479)
Q Consensus 1346 ~iIpQdp----~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1421 (1479)
+++||+| .++..|+++|+..... ||+|||||++||||+++
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~------------------------------------LS~G~~qrl~la~al~~ 121 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL------------------------------------LSGGNQQKVVLARWLAR 121 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh------------------------------------cCHHHHHHHHHHHHHcc
Confidence 9999995 3445799999863210 89999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1422 ~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+|++|+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 122 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~ 181 (182)
T cd03215 122 DPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGR 181 (182)
T ss_pred CCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCc
Confidence 999999999999999999999999999864 47899999999999988 99999999996
No 317
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-36 Score=347.67 Aligned_cols=201 Identities=27% Similarity=0.431 Sum_probs=171.2
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecCC--CChh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISL--LGLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~l~ 1339 (1479)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGS--FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECC--EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 5899999999964 3599999999999999999999999999999999999974 69999999999854 4456
Q ss_pred hhhcceEEEcCcccccc-ccHhhhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1340 DLRSRFGIIPQEPVLFE-GTVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
.+|+.++++||++.+|. .|+++|+... +..+ ++++.++++.+++.+.+.. .......+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 154 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKD-------RLDKPGGGLSGGQQ 154 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHH
Confidence 78899999999999997 4999999521 1111 3456778888887544321 12233457999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEe
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVD 1476 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~ 1476 (1479)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||||++|+
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~ 221 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFN 221 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEe
Confidence 9999999999999999999999999999999999999987667899999999999876 99999996
No 318
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.8e-36 Score=359.84 Aligned_cols=209 Identities=32% Similarity=0.434 Sum_probs=171.9
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EE
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TA 711 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------ia 711 (1479)
..++++|++++|+ +.++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++
T Consensus 13 ~~L~l~~l~~~~~---~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 89 (375)
T PRK09452 13 PLVELRGISKSFD---GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVN 89 (375)
T ss_pred ceEEEEEEEEEEC---CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 4689999999995 346899999999999999999999999999999999999999999999984 89
Q ss_pred EEeccCcCC-CCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 712 YVAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 712 yv~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
||+|++.++ ..||+|||.|+.........+. .....+-++.+... .....++.+|||||||||+|||||+.+|++
T Consensus 90 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~--~~~~~~~l~~~~l~--~~~~~~p~~LSgGq~QRVaLARaL~~~P~l 165 (375)
T PRK09452 90 TVFQSYALFPHMTVFENVAFGLRMQKTPAAEI--TPRVMEALRMVQLE--EFAQRKPHQLSGGQQQRVAIARAVVNKPKV 165 (375)
T ss_pred EEecCcccCCCCCHHHHHHHHHhhcCCCHHHH--HHHHHHHHHHcCCc--hhhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998876 5699999999854211000000 00112223333222 234567789999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
+|||||||+||++.++.+.+.+.+...+ |.|+|+||||.+++. .+|+|++|++|+|++.|+++++.+.
T Consensus 166 lLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 166 LLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999998776655543 899999999999865 5999999999999999999998764
No 319
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.3e-36 Score=359.37 Aligned_cols=199 Identities=30% Similarity=0.482 Sum_probs=172.1
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.|+++|++++|+. ..+|+||||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+ ...|++|+
T Consensus 41 ~i~i~nl~k~y~~--~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGD--KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 5999999999964 35999999999999999999999999999999999999999999999999997654 56789999
Q ss_pred EEcCccccc-cccHhhhcCCCC---CCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHH
Q 000463 1347 IIPQEPVLF-EGTVRSNIDPIG---QYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1479)
Q Consensus 1347 iIpQdp~LF-~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1418 (1479)
++||++.+| ..|+++|+..+. ..+. +.+.++++.+++.+. .+..+ .+||+|||||++||||
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~-------~~~~~----~~LS~G~kqrv~lA~a 186 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-------ADARV----SDLSGGMKRRLTLARA 186 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-------hCCCh----hhCCHHHHHHHHHHHH
Confidence 999999987 459999996322 1222 334566777766543 34443 3699999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1419 LLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|+.+|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||||++|++|+
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999864 47999999999999977 99999999995
No 320
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-36 Score=346.52 Aligned_cols=204 Identities=25% Similarity=0.389 Sum_probs=173.8
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC--C---CccEEEEcCEecCC--CChh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE--P---SGGRIIIDGIDISL--LGLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~--p---~~G~I~IDG~dI~~--i~l~ 1339 (1479)
-|+++|++++|+. +.+|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999974 459999999999999999999999999999999999975 4 59999999999864 3455
Q ss_pred hhhcceEEEcCccccccccHhhhcCCC---CCC-----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI---GQY-----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~-----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
.+|++++++||+|.+|..|+++|+... ... .++++.++++.+++.+.+. ........+||+||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~Gq~q 155 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVK-------DHLHESALSLSGGQQQ 155 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchh-------hHHhcCcccCCHHHHH
Confidence 678899999999999999999999631 111 1345677788887754332 1223345679999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++||||++++|+||||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|+
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~ 224 (252)
T PRK14255 156 RVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGN 224 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999988767899999999999976 99999999985
No 321
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=346.10 Aligned_cols=192 Identities=22% Similarity=0.332 Sum_probs=167.2
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +.++++
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 689999999964 4599999999999999999999999999999999999999999999999998642 346899
Q ss_pred EcCcccccc-ccHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFE-GTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||++.+|. .|+++|+... .... ++++.++++..++.+..... ..+||||||||++|||||
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGq~qrl~laral 143 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKRY-----------IWQLSGGQRQRVGIARAL 143 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhCC-----------hhhCCHHHHHHHHHHHHH
Confidence 999999887 5999999632 1122 34577888888887654433 246899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDA 1477 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~ 1477 (1479)
+++|++|||||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||+|++|++
T Consensus 144 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~ 204 (255)
T PRK11248 144 AANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSP 204 (255)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 99999999999999999999999999999863 37999999999999876 999999984
No 322
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=2.3e-36 Score=323.09 Aligned_cols=163 Identities=28% Similarity=0.464 Sum_probs=150.1
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|. +++++
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999644 45999999999999999999999999999999999999999999999973 68999
Q ss_pred EcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEE
Q 000463 1348 IPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1479)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILi 1427 (1479)
+||+|.++++|+++|+... ....||+|||||++||||++++|++++
T Consensus 69 ~~q~~~~~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~ll 114 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVF 114 (166)
T ss_pred ECCCCccccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999999632 135799999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhhcCEEEEEeCC
Q 000463 1428 MDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAG 1478 (1479)
Q Consensus 1428 LDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G 1478 (1479)
|||||++||.++.+.+.+.|++. ++|+|++||+++....||+|++|++|
T Consensus 115 lDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~ 163 (166)
T cd03223 115 LDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGE 163 (166)
T ss_pred EECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCC
Confidence 99999999999999999999986 68999999999988779999999886
No 323
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-36 Score=346.21 Aligned_cols=201 Identities=22% Similarity=0.307 Sum_probs=175.2
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CccEEEEcCEecCCC--Chh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLL--GLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1339 (1479)
.+.+++.+++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++| .+|+|.+||.++... ...
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4889999999964 3599999999999999999999999999999999999986 799999999998653 444
Q ss_pred hhhcceEEEcCccccccccHhhhcCCCC------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHH
Q 000463 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPIG------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1413 (1479)
.+|++++++||+|.+|..|+++|+.... ...++++.++++.+++.+.+... ..+...+||+|||||+
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~-------~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKDK-------LKVSGLSLSGGQQQRL 158 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhhh-------hhCCcccCCHHHHHHH
Confidence 6788999999999999999999997421 11235788899999987655432 2345568999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEe
Q 000463 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVD 1476 (1479)
Q Consensus 1414 ~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~ 1476 (1479)
+|||||+++|+||+|||||++||+.+...+.+.|++..+++|+|+|||+++.+.+ ||||++|+
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~ 222 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFS 222 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEe
Confidence 9999999999999999999999999999999999998777899999999999877 99999996
No 324
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=363.15 Aligned_cols=186 Identities=31% Similarity=0.468 Sum_probs=165.4
Q ss_pred cceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhh----hcceEEEcCccccccc-
Q 000463 1283 LVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL----RSRFGIIPQEPVLFEG- 1357 (1479)
Q Consensus 1283 ~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L----R~~i~iIpQdp~LF~g- 1357 (1479)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.|+.+.+..++ |++++|+||++.+|..
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 48999999999999999999999999999999999999999999999999998877654 3579999999999975
Q ss_pred cHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeC
Q 000463 1358 TVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDE 1430 (1479)
Q Consensus 1358 TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDE 1430 (1479)
|+++|+... ...+ ++++.++++.++|.++....|. +||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~~-----------~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPD-----------ELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCcc-----------cCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 999999631 1122 3567889999999877666553 689999999999999999999999999
Q ss_pred CCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1431 ATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1431 aTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++||+.+.+.+++.|++.. .++|+|+|||+++.+.. ||||++|++|+
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~ 242 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGE 242 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999864 47899999999999876 99999999985
No 325
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=4.4e-36 Score=335.98 Aligned_cols=198 Identities=49% Similarity=0.856 Sum_probs=176.3
Q ss_pred EEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------------
Q 000463 646 EVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----------------- 708 (1479)
Q Consensus 646 ~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------------- 708 (1479)
.+.|++|.|+.. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 577999999643 5799999999999999999999999999999999999999999999865
Q ss_pred eEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCC
Q 000463 709 TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1479)
Q Consensus 709 ~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 788 (1479)
.++|++|++.+++.|++||+.++.+.+.++.+++.+.+++.+.++..|.|+++.++.++.+||||||||++||||++.+|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 37899999998889999999987665555566778888888888888999999889999999999999999999999999
Q ss_pred CEEEEeCccCCCChhhHHHHHHH-HHhhh-cCCcEEEEEccCCcccccCCEEEEEeCCE
Q 000463 789 DIYLLDDVFSAVDAHTGSDIFKE-CVRGA-LKGKTIILVTHQVDFLHNVDLILVMREGM 845 (1479)
Q Consensus 789 ~illLDep~saLD~~~~~~i~~~-~~~~~-~~~~tvilvTH~~~~l~~~D~i~~l~~G~ 845 (1479)
+++||||||++||+.+.+.+.+. +++.. .+|+|+|++||+.+.+..+|++++|++|.
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999988873 45443 34899999999999988899999999884
No 326
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-36 Score=346.83 Aligned_cols=203 Identities=24% Similarity=0.401 Sum_probs=174.8
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCC-----ccEEEEcCEecCC--CCh
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS-----GGRIIIDGIDISL--LGL 1338 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~-----~G~I~IDG~dI~~--i~l 1338 (1479)
+.++++|++++|+. +.+|+|+||+|++||.+||+|++|||||||+++|.|+++|+ +|+|.+||.|++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 46999999999964 35999999999999999999999999999999999999985 8999999999853 345
Q ss_pred hhhhcceEEEcCccccccccHhhhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1339 HDLRSRFGIIPQEPVLFEGTVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
..+|+.++++||++.+|..|+++|+... +..+ ++++.++++.+++.+++..+ .......||||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LSgGq~ 156 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHK-------IHKSALDLSGGQQ 156 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhH-------hcCCcccCCHHHH
Confidence 5778999999999999999999999631 1112 34567788888887655422 2334568999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDA 1477 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~ 1477 (1479)
||++|||||+++|+||||||||++||.++...+.+.|++.. .++|+|+|||+++.+.. ||||++|++
T Consensus 157 qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~ 226 (261)
T PRK14258 157 QRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKG 226 (261)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEcc
Confidence 99999999999999999999999999999999999999853 48999999999999976 999999998
No 327
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-36 Score=351.42 Aligned_cols=208 Identities=25% Similarity=0.412 Sum_probs=168.7
Q ss_pred cEEEEeeEEEecCCC--CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000463 644 AVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1479)
.|+++|++++|++.. ..++|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 378999999996432 13699999999999999999999999999999999999999999998853
Q ss_pred ------------------------eEEEEeccC--cCCCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCC
Q 000463 709 ------------------------TTAYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGD 759 (1479)
Q Consensus 709 ------------------------~iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd 759 (1479)
.++||+|+| .++..||+|||.|+.. .+++...+ + ..+-++.+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~--~---~~~~l~~~gL~- 155 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKK--R---AAKYIELVGLD- 155 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHH--H---HHHHHHHcCCC-
Confidence 269999986 5677899999998742 12111111 1 11223333221
Q ss_pred ccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccc-cCCEE
Q 000463 760 QTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLI 838 (1479)
Q Consensus 760 ~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~-~~D~i 838 (1479)
....++++.+|||||||||+|||||+.+|+++||||||++||+...+.+.+.+.+...+|+|+|+|||+++++. .||+|
T Consensus 156 ~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv 235 (305)
T PRK13651 156 ESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRT 235 (305)
T ss_pred hhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEE
Confidence 11245678899999999999999999999999999999999999999988766555556999999999999875 59999
Q ss_pred EEEeCCEEEEecChHHHHh
Q 000463 839 LVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 839 ~~l~~G~i~~~g~~~~l~~ 857 (1479)
++|++|++++.|+++++..
T Consensus 236 ~vl~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 236 IFFKDGKIIKDGDTYDILS 254 (305)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999988765
No 328
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=351.07 Aligned_cols=199 Identities=24% Similarity=0.436 Sum_probs=179.5
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
..|+++||+.+|. ...+++|+|++|++||.+.++|||||||||++++|.||..|++|+|.+||.||..++++ ++.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 4699999999998 45699999999999999999999999999999999999999999999999999998887 5789
Q ss_pred EEEcCccccccc-cHhhhcCCC-C---CCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHH
Q 000463 1346 GIIPQEPVLFEG-TVRSNIDPI-G---QYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1479)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~-~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1416 (1479)
++|+|+..||.- ||++|+... . ...+ +.+.++|+.++|.++-.+.|.. |||||+||++||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~q-----------LSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPHQ-----------LSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChhh-----------hChHHHHHHHHH
Confidence 999999999966 999999632 1 1233 4789999999999998888754 699999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1417 RALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||..+|++|+||||-|+||.+-...+|.-|++.. .+.|.|.|||+-++.+. +|||.||++|+
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCc
Confidence 99999999999999999999999999998888765 37899999999988766 99999999996
No 329
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.4e-36 Score=337.00 Aligned_cols=193 Identities=28% Similarity=0.405 Sum_probs=166.0
Q ss_pred EEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCCh----hhhhcce
Q 000463 1270 LIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL----HDLRSRF 1345 (1479)
Q Consensus 1270 ~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l----~~LR~~i 1345 (1479)
++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4689999964 359999999999999999999999999999999999999999999999999775542 2457789
Q ss_pred EEEcCcccccc-ccHhhhcCCC---CC----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1346 GIIPQEPVLFE-GTVRSNIDPI---GQ----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1346 ~iIpQdp~LF~-gTIR~NLdp~---~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
++++|+|.+|. .|+++|+... .. ..++++.++++..++.+..... ..+||+|||||++|||
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qr~~lar 147 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQK-----------IYELSGGEQQRVALAR 147 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcCC-----------hhhCCHHHHHHHHHHH
Confidence 99999999997 5999999631 11 1245678888888886554332 2469999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhhcCEEEEE
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMDCDRVIVV 1475 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL 1475 (1479)
||+++|++|||||||++||+++.+.+.+.|++.. ++.|+|+++|+++.+..||+|++|
T Consensus 148 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 148 AILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999999999999864 378999999999988779999986
No 330
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.9e-36 Score=356.96 Aligned_cols=208 Identities=31% Similarity=0.440 Sum_probs=170.9
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------eEEE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------TTAY 712 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~iay 712 (1479)
.++++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~ 78 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGF 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEE
Confidence 3789999999953 4699999999999999999999999999999999999999999999987 3899
Q ss_pred EeccCcCCC-CcHHHHHhcCCCCC----hhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 713 VAQTSWIQN-GTIEENILFGLPMN----RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 713 v~Q~~~i~~-~Tv~enI~fg~~~~----~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
|+|++.++. .|++|||.|+.... .....+.. ....+-++.+... .....++.+|||||||||+|||||+.+
T Consensus 79 v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~L~--~~~~~~~~~LSgGq~QRvalArAL~~~ 154 (353)
T PRK10851 79 VFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIK--AKVTQLLEMVQLA--HLADRYPAQLSGGQKQRVALARALAVE 154 (353)
T ss_pred EecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHH--HHHHHHHHHcCCc--hhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 999998874 69999999985421 00001100 0112223333222 234567889999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
|+++|||||||+||+.+++.+.+.+.+...+ |+|+|+||||++++.. ||+|++|++|++++.|+++++.+.
T Consensus 155 P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 155 PQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999998766655544 8999999999998765 899999999999999999998764
No 331
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-36 Score=341.18 Aligned_cols=207 Identities=29% Similarity=0.411 Sum_probs=168.2
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------eEEE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------TTAY 712 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~iay 712 (1479)
.++++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~ 78 (239)
T cd03296 2 SIEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGF 78 (239)
T ss_pred EEEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEE
Confidence 3789999999953 5799999999999999999999999999999999999999999999987 3799
Q ss_pred EeccCcCC-CCcHHHHHhcCCCCChh----hHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 713 VAQTSWIQ-NGTIEENILFGLPMNRA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 713 v~Q~~~i~-~~Tv~enI~fg~~~~~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
++|+|.++ +.|++||+.++...... ...+..+ ...+.++.+.. ......++.+||||||||++||||++.+
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l--~~~~~~~~~~LS~G~~qrl~la~al~~~ 154 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRA--KVHELLKLVQL--DWLADRYPAQLSGGQRQRVALARALAVE 154 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHH--HHHHHHHHcCC--hhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 99999877 46999999986432110 1111100 11222333322 2234567789999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|+++||||||++||+++.+.+.+.+.+...+ |+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 155 PKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 9999999999999999999998765554443 8999999999998765 89999999999999999888754
No 332
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-36 Score=350.42 Aligned_cols=206 Identities=27% Similarity=0.403 Sum_probs=174.3
Q ss_pred CccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCccEEEEcCEecCCC--C
Q 000463 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISLL--G 1337 (1479)
Q Consensus 1265 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~i--~ 1337 (1479)
...++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +
T Consensus 37 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGE--FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred ceEEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 346899999999964 349999999999999999999999999999999999865 4999999999998643 3
Q ss_pred hhhhhcceEEEcCccccccccHhhhcCCC---CCC-C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchH
Q 000463 1338 LHDLRSRFGIIPQEPVLFEGTVRSNIDPI---GQY-S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1338 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~-s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
...+|++++|+||+|.+|.+|+++|+... ... + ++++.++++..++.+.+. +.++ .....|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~----~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS---DRLD----KNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh---hHhh----CChhhCCHHH
Confidence 34678899999999999989999999631 111 1 245667788887754332 1222 3345799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||++|||||+++|++|||||||++||.++.+.+.+.|++..+++|||+++|+++.+.+ ||||++|++|+
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~ 258 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGV 258 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999987667899999999999876 99999999985
No 333
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-36 Score=341.09 Aligned_cols=196 Identities=23% Similarity=0.437 Sum_probs=173.2
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
|+++|++++|.. + +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~--~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE--F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC--c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 578999999964 3 8999999999999999999999999999999999999999999999999987654 3789999
Q ss_pred EcCcccccc-ccHhhhcCCC---CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFE-GTVRSNIDPI---GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
+||++.+|. .|+++|+... ... .++++.++++.+++.+++...+ .+||+|||||++||||+
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 144 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP-----------ETLSGGEQQRVAIARAL 144 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc-----------ccCCHHHHHHHHHHHHH
Confidence 999999985 6999999621 111 2356788899999987766554 36899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+++|++|+|||||++||..+.+.+.+.|++..+ ++|+|++||+++.+.+ ||+|++|++|+
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~ 207 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGK 207 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999998643 7999999999999987 99999999985
No 334
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-36 Score=354.34 Aligned_cols=205 Identities=22% Similarity=0.330 Sum_probs=170.3
Q ss_pred cEEEEeeeeeecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC----CCccEEEEcCEecCCCChhh
Q 000463 1267 NVDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE----PSGGRIIIDGIDISLLGLHD 1340 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~----p~~G~I~IDG~dI~~i~l~~ 1340 (1479)
-++++|++++|+... ..+|+||||+|++||.+||||+||||||||+++|.|+++ |++|+|.+||.|+.+++.++
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 379999999997532 359999999999999999999999999999999999997 48999999999999988776
Q ss_pred hhc----ceEEEcCccc--ccc-ccHhhhc----CCCCCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCC
Q 000463 1341 LRS----RFGIIPQEPV--LFE-GTVRSNI----DPIGQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNW 1405 (1479)
Q Consensus 1341 LR~----~i~iIpQdp~--LF~-gTIR~NL----dp~~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1405 (1479)
+|+ +|++|||+|. ++. -|+.+|+ ...... .++++.++|++++|.+.... ......+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~--------l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASR--------LDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH--------HhCCchhC
Confidence 653 6999999995 443 2565544 322111 23567889999998653211 11234579
Q ss_pred CchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1406 SVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1406 SgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ 231 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQ 231 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999999998753 7899999999999965 99999999995
No 335
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-36 Score=359.71 Aligned_cols=199 Identities=24% Similarity=0.430 Sum_probs=175.1
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcce
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1479)
..++++|++++|.. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++.+.+. .|+++
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 35999999999964 359999999999999999999999999999999999999999999999999987664 46789
Q ss_pred EEEcCccccccc-cHhhhcCCC-C--CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHH
Q 000463 1346 GIIPQEPVLFEG-TVRSNIDPI-G--QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1479)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~-~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1417 (1479)
++++|++.+|.. |+++|+... . ..+ ++++.++++..++.++....|. +||||||||++|||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~~-----------~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPH-----------QLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCChh-----------hCCHHHHHHHHHHH
Confidence 999999999976 999999732 1 222 3467788899998877665553 58999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1418 ALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||+++|++|+||||||+||..+...+.+.|++.. .+.|+|+|||+++.+.. ||||+||++|+
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~ 227 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGK 227 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999988887764 36899999999999876 99999999996
No 336
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2.6e-36 Score=343.76 Aligned_cols=201 Identities=22% Similarity=0.257 Sum_probs=169.2
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccC--CCCccEEEEcCEecCCCChhhh-hcc
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLV--EPSGGRIIIDGIDISLLGLHDL-RSR 1344 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--~p~~G~I~IDG~dI~~i~l~~L-R~~ 1344 (1479)
|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 578999999963 35999999999999999999999999999999999994 7999999999999988877664 456
Q ss_pred eEEEcCccccccc-cHhhhcCCC----CC------CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchH
Q 000463 1345 FGIIPQEPVLFEG-TVRSNIDPI----GQ------YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1345 i~iIpQdp~LF~g-TIR~NLdp~----~~------~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
++++||+|.+|.+ |+++|+... .. .+ ++++.++++..++.+.. ++..+. ..|||||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~---~~LS~G~ 149 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEF------LNRSVN---EGFSGGE 149 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhh------cccccc---cCcCHHH
Confidence 9999999999887 899998421 10 11 24567777777775321 122221 2499999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh--cCEEEEEeCCC
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD--CDRVIVVDAGL 1479 (1479)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~--~DrIlVL~~G~ 1479 (1479)
|||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|+
T Consensus 150 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~ 222 (243)
T TIGR01978 150 KKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGR 222 (243)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCE
Confidence 999999999999999999999999999999999999999875 47899999999999986 79999999985
No 337
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4.7e-36 Score=356.66 Aligned_cols=209 Identities=27% Similarity=0.431 Sum_probs=172.9
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCC--cEEEECCe-----------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKIS--GKVKVCGT----------- 709 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~--G~i~~~g~----------- 709 (1479)
..++++|++++|++ ..+|+|+||++++||+++|+|||||||||||++|+|+.+|++ |+|.++|.
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ 80 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRG 80 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCC
Confidence 46899999999953 469999999999999999999999999999999999999999 99999873
Q ss_pred EEEEeccCcCC-CCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCC
Q 000463 710 TAYVAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1479)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 788 (1479)
++||+|++.++ ..||+|||.|+.........+..+ ...+-++.+... ....++..+|||||||||+|||||+.+|
T Consensus 81 ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~--~v~~~l~~~gL~--~~~~~~~~~LSgGq~QRvaLARAL~~~P 156 (362)
T TIGR03258 81 LALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE--RVADALKLVGLG--DAAAHLPAQLSGGMQQRIAIARAIAIEP 156 (362)
T ss_pred EEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHhcCCC--chhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 79999999877 569999999875321100011110 122234443332 2346778899999999999999999999
Q ss_pred CEEEEeCccCCCChhhHHHHHHHHHhhhcC--CcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALK--GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 789 ~illLDep~saLD~~~~~~i~~~~~~~~~~--~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
+++|||||||+||+..++++.+.+.+...+ |+|+|+||||++++.. ||+|++|++|++++.|+++++.+.
T Consensus 157 ~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 157 DVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999998877665554 7999999999999765 999999999999999999999764
No 338
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-36 Score=359.25 Aligned_cols=208 Identities=29% Similarity=0.416 Sum_probs=170.1
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EEE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TAY 712 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------iay 712 (1479)
.++++|++++|+ ++++|+|+||++++||+++|+|||||||||||++|+|+++|++|+|.++|. ++|
T Consensus 3 ~l~i~~l~~~~~---~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~ 79 (369)
T PRK11000 3 SVTLRNVTKAYG---DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGM 79 (369)
T ss_pred EEEEEEEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEE
Confidence 488999999995 246999999999999999999999999999999999999999999999873 899
Q ss_pred EeccCcCC-CCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEE
Q 000463 713 VAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIY 791 (1479)
Q Consensus 713 v~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~il 791 (1479)
++|++.++ +.||+|||.|+........++..+ ...+-++.+.. ......+..+|||||||||+|||||+.+|+++
T Consensus 80 v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~--~~~~~l~~lgL--~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lL 155 (369)
T PRK11000 80 VFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ--RVNQVAEVLQL--AHLLDRKPKALSGGQRQRVAIGRTLVAEPSVF 155 (369)
T ss_pred EeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH--HHHHHHHHcCC--hhhhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99998876 569999999875321100011000 11222333322 22345677899999999999999999999999
Q ss_pred EEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 792 LLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 792 lLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
|||||||+||+..++.+.+.+.+...+ |+|+|+|||+++++.. ||+|++|++|++++.|+++++...
T Consensus 156 LLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 156 LLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999998766655444 8999999999998764 999999999999999999998754
No 339
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.9e-36 Score=350.32 Aligned_cols=209 Identities=24% Similarity=0.380 Sum_probs=169.6
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eE
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TT 710 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~i 710 (1479)
..++++|+++.|+ +..+|+||||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 6 ~~i~i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRV 82 (306)
T ss_pred ceEEEEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcE
Confidence 4799999999995 35799999999999999999999999999999999999999999999987 38
Q ss_pred EEEeccCcCC-CCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCC
Q 000463 711 AYVAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1479)
Q Consensus 711 ayv~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 789 (1479)
||+||++.++ +.|++||+.|..........+..+ ...+-++.+... .....+..+||||||||++||||++++|+
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~--~~~~~l~~~~l~--~~~~~~~~~LS~G~~qrl~la~aL~~~P~ 158 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARA--LVPPLLEFAKLE--NKADAKVGELSGGMKRRLTLARALVNDPD 158 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCCc--hHhcCchhhCCHHHHHHHHHHHHHhCCCC
Confidence 9999998876 579999998532211000011111 011222332221 12345667899999999999999999999
Q ss_pred EEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 790 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
+++|||||++||+.+++.+++.+.+...+|+|+|++||++++++. ||+|++|++|++++.|+++++.+.
T Consensus 159 lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 159 VLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 999999999999999999987665555568999999999999975 999999999999999999988643
No 340
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.4e-36 Score=339.09 Aligned_cols=203 Identities=31% Similarity=0.427 Sum_probs=161.3
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCc-----ccCCcEEEECC-----------
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEM-----HKISGKVKVCG----------- 708 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~-----~~~~G~i~~~g----------- 708 (1479)
|+++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|.. +|++|+|.++|
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 468999999953 47999999999999999999999999999999999999 99999999877
Q ss_pred ----eEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccC--CCccchHHHHHHHHHH
Q 000463 709 ----TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGER--GINLSGGQKQRIQLAR 782 (1479)
Q Consensus 709 ----~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~--g~~LSGGQkqRv~LAR 782 (1479)
.++|++|++.+++.|++||+.++.........+..+ ....+-++.+... .....+ +.+||||||||++|||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~--~~~~~~~~~~~LSgG~~qrv~la~ 154 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELD-ERVEEALRKAALW--DEVKDRLHALGLSGGQQQRLCLAR 154 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHH-HHHHHHHHHcCCC--hHHhccCCcccCCHHHHHHHHHHH
Confidence 278999999888889999998864321100000000 0011222222211 112233 5899999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHH
Q 000463 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNA 854 (1479)
Q Consensus 783 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~ 854 (1479)
|++.+|+++||||||++||+.+++.+++.+.+...+ +|+|++||+++++.. ||++++|++|++++.|++++
T Consensus 155 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 155 ALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 999999999999999999999999998766555445 999999999998764 99999999999999887654
No 341
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.2e-36 Score=340.48 Aligned_cols=207 Identities=23% Similarity=0.331 Sum_probs=168.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------E
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------T 710 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------i 710 (1479)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFG---GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEEC---CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 46889999995 246999999999999999999999999999999999999999999998872 7
Q ss_pred EEEeccCcCCC-CcHHHHHhcCCCCChhh---------HHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHH
Q 000463 711 AYVAQTSWIQN-GTIEENILFGLPMNRAK---------YGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 711 ayv~Q~~~i~~-~Tv~enI~fg~~~~~~~---------~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1479)
+|++|++.++. .|++||+.++....... ..+.. .....+.++.+. .....+.+..+|||||||||+|
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~--l~~~~~~~~~~LSgG~~qrv~l 154 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREA-RERAEELLERVG--LADLADRPAGELSYGQQRRLEI 154 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHH-HHHHHHHHHHcC--ccchhhCChhhCCHHHHHHHHH
Confidence 99999988765 59999998864321000 00111 111223344442 2234567788999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|||++.+|+++||||||++||+.+++.+++.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+++++.+
T Consensus 155 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 155 ARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 999999999999999999999999999987666554478999999999999865 89999999999999999887653
No 342
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3.8e-36 Score=346.52 Aligned_cols=202 Identities=23% Similarity=0.396 Sum_probs=171.3
Q ss_pred cEEEEeeeeeecC-------CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChh
Q 000463 1267 NVDLIDLQVRYRS-------NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~-------~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~ 1339 (1479)
-|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 4899999999952 123599999999999999999999999999999999999999999999999999765666
Q ss_pred hhhcceEEEcCccc--cccc-cHhhhcCC---CC-C----CCHHHHHHHHHHcCch-HHHHhCcCCccccccCCCCCCCc
Q 000463 1340 DLRSRFGIIPQEPV--LFEG-TVRSNIDP---IG-Q----YSDEEIWKSLERCQLK-DVVAAKPDKLDSLVADSGDNWSV 1407 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~--LF~g-TIR~NLdp---~~-~----~sd~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSg 1407 (1479)
..|++++++||+|. ++.. |+.+|+.. .+ . ..++++.++++.+++. +..... ..+||+
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYY-----------PHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcC-----------chhcCH
Confidence 66778999999985 4443 78888742 11 1 1235688899999984 333222 246999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1408 GQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1408 GQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||++|||||+++|+||||||||++||+++.+.+.+.|++..+ +.|||+|||+++.+.. ||||++|++|+
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~ 227 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGE 227 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999999999998643 7899999999999987 99999999985
No 343
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=4e-36 Score=354.47 Aligned_cols=205 Identities=27% Similarity=0.424 Sum_probs=170.9
Q ss_pred cEEEEeeeeeecC--CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCC---ccEEEEcCEecCCCChhhh
Q 000463 1267 NVDLIDLQVRYRS--NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS---GGRIIIDGIDISLLGLHDL 1341 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~--~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~---~G~I~IDG~dI~~i~l~~L 1341 (1479)
-++++|++++|+. +...+|+||||+|++||++||||+||||||||+++|.|+++|. +|+|.+||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 5899999999964 2346999999999999999999999999999999999999996 9999999999999987776
Q ss_pred h----cceEEEcCcc--cccc-ccHhhhcC----CCCCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCC
Q 000463 1342 R----SRFGIIPQEP--VLFE-GTVRSNID----PIGQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWS 1406 (1479)
Q Consensus 1342 R----~~i~iIpQdp--~LF~-gTIR~NLd----p~~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1406 (1479)
| ++|++||||| .++. -|+.+|+. .....+. +++.++|+.+++.+ +. ..+......||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~-------~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPE-------AR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCC-------hH-HHhcCCcccCC
Confidence 4 4799999999 4554 37777662 2222232 34566777776642 11 11334456799
Q ss_pred chHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1407 gGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ 239 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGR 239 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999988754 7899999999999976 99999999995
No 344
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-36 Score=335.14 Aligned_cols=196 Identities=32% Similarity=0.442 Sum_probs=159.9
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------eEEEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------TTAYV 713 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~iayv 713 (1479)
++++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++|+
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v 77 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMV 77 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEE
Confidence 468899999953 4799999999999999999999999999999999999999999999987 37999
Q ss_pred eccCcCC-CCcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCC
Q 000463 714 AQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1479)
Q Consensus 714 ~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 789 (1479)
+|++.++ +.|++||+.++... +....++. ..+-++.+.. .....+...+||||||||++||||++.+|+
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l--~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 150 (213)
T cd03259 78 FQDYALFPHLTVAENIAFGLKLRGVPKAEIRAR-----VRELLELVGL--EGLLNRYPHELSGGQQQRVALARALAREPS 150 (213)
T ss_pred cCchhhccCCcHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHcCC--hhhhhcChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9998776 57999999876421 11111111 1122333322 223456678999999999999999999999
Q ss_pred EEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEEec
Q 000463 790 IYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1479)
Q Consensus 790 illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1479)
++||||||++||+.+++.+++.+.+... .|+|+|++||+++++.. ||++++|++|++++.|
T Consensus 151 ~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 151 LLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999876655544 48999999999998765 8999999999998754
No 345
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-36 Score=346.90 Aligned_cols=207 Identities=26% Similarity=0.410 Sum_probs=169.3
Q ss_pred cEEEEeeEEEecCCC--CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000463 644 AVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1479)
.++++|++++|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999996322 24699999999999999999999999999999999999999999999887
Q ss_pred ----eEEEEeccC--cCCCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCcc-ccccCCCccchHHHHHH
Q 000463 709 ----TTAYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQT-EIGERGINLSGGQKQRI 778 (1479)
Q Consensus 709 ----~iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t-~ig~~g~~LSGGQkqRv 778 (1479)
.+|||+|+| .++..|++|||.|+.. .+.....+. ..+-++.+ |..+ .....+.+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv 154 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKI 154 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHH
Confidence 269999997 5677899999998742 122111111 11223333 2222 23467889999999999
Q ss_pred HHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHH
Q 000463 779 QLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALL 856 (1479)
Q Consensus 779 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~ 856 (1479)
+|||||+.+|+++||||||++||+.+++.+.+.+.+... +|+|+|++||+++++. .||+|++|++|++++.|+++++.
T Consensus 155 ~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 155 AIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999876555544 4899999999999986 58999999999999999998876
Q ss_pred h
Q 000463 857 N 857 (1479)
Q Consensus 857 ~ 857 (1479)
+
T Consensus 235 ~ 235 (286)
T PRK13646 235 K 235 (286)
T ss_pred h
Confidence 4
No 346
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-36 Score=345.75 Aligned_cols=203 Identities=30% Similarity=0.453 Sum_probs=166.8
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1479)
.++++|+++.|+. .+++|+|+||++++||+++|+|+||||||||+++|.|.++|++|+|.++| .+
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 5899999999952 24699999999999999999999999999999999999999999999987 27
Q ss_pred EEEeccC--cCCCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHh
Q 000463 711 AYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1479)
Q Consensus 711 ayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 785 (1479)
+|++|+| .++..|++||+.|+.. .+....++. ..+-++.+... ........+|||||||||+|||||+
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~L~--~~~~~~~~~LSgG~~qrv~laraL~ 154 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERR-----VEEALKAVRMW--DFRDKPPYHLSYGQKKRVAIAGVLA 154 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHCCCH--HHhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999998 5778899999998742 111111111 11222222221 1234567799999999999999999
Q ss_pred cCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHH
Q 000463 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNAL 855 (1479)
Q Consensus 786 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l 855 (1479)
.+|+++||||||++||+.+++.+++.+.+...+|+|+|++||+++++. .||+|++|++|++++.|+++++
T Consensus 155 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 155 MDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999998766555456899999999999985 5999999999999999998654
No 347
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.1e-36 Score=353.05 Aligned_cols=186 Identities=28% Similarity=0.483 Sum_probs=163.6
Q ss_pred CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCccccccc-cHh
Q 000463 1282 PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEG-TVR 1360 (1479)
Q Consensus 1282 ~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~g-TIR 1360 (1479)
..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|++++++||++.+|.+ |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 359999999999999999999999999999999999999999999999999976 345678899999999999976 999
Q ss_pred hhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCC
Q 000463 1361 SNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATA 1433 (1479)
Q Consensus 1361 ~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs 1433 (1479)
+|+.... ..+ ++++.++++.+++.+..... + .+||||||||++|||||+++|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~----~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEAADRP-------V----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCc-------h----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 9996421 122 34578888998886544332 2 4699999999999999999999999999999
Q ss_pred CCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1434 SVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1434 ~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||||++|++|+
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999864 47899999999999987 99999999995
No 348
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-36 Score=354.56 Aligned_cols=207 Identities=27% Similarity=0.401 Sum_probs=170.7
Q ss_pred EEEEeeEEEecCCC-CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------
Q 000463 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------- 708 (1479)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 708 (1479)
|+++|++++|+... ++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 35799999999999999999999999999999999999999999999987
Q ss_pred -eEEEEeccCcCCC-CcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHH
Q 000463 709 -TTAYVAQTSWIQN-GTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1479)
Q Consensus 709 -~iayv~Q~~~i~~-~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 783 (1479)
.++|++|++.++. .|++||+.++... +....++ ...+.++.+.. .......+.+|||||||||+||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL--~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELVGL--SDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCC--chhhhCChhhCCHHHHHHHHHHHH
Confidence 2899999988764 7999999886432 1111111 11223333322 223456778999999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 784 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
++.+|+++||||||++||+.+++.+++.+.+...+ |+|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999998766655443 8999999999999875 999999999999999999988754
No 349
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-36 Score=343.96 Aligned_cols=204 Identities=26% Similarity=0.424 Sum_probs=171.0
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCC-----ccEEEEcCEecCC--CChh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS-----GGRIIIDGIDISL--LGLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~-----~G~I~IDG~dI~~--i~l~ 1339 (1479)
-++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|. +|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 3789999999963 35999999999999999999999999999999999999874 8999999999875 3455
Q ss_pred hhhcceEEEcCccccccc-cHhhhcCCC---CC-CCHHH----HHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1340 DLRSRFGIIPQEPVLFEG-TVRSNIDPI---GQ-YSDEE----IWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~g-TIR~NLdp~---~~-~sd~e----I~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
.+|++++++||+|.+|.+ |+++|+... .. ..+++ +.+.++..++.+.+ +..++.+ ..+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~----~~~LS~G~~ 154 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLKTP----ATGLSGGQQ 154 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhcCC----cccCCHHHH
Confidence 778899999999999985 999999521 11 12333 33344555554332 2233433 457999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++||||++++|+||||||||++||..+.+.+.+.|++..+++|+|+++|+++.+.+ ||||++|++|+
T Consensus 155 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 224 (252)
T PRK14272 155 QRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGD 224 (252)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999987677999999999999987 99999999985
No 350
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-36 Score=335.55 Aligned_cols=201 Identities=35% Similarity=0.461 Sum_probs=162.2
Q ss_pred EEEEeeEEEecCCC-CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------eEEEEec
Q 000463 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------TTAYVAQ 715 (1479)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------~iayv~Q 715 (1479)
++++|++++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|..+|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 46899999996321 14799999999999999999999999999999999999999999999987 4799999
Q ss_pred cCcCCC-CcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEE
Q 000463 716 TSWIQN-GTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIY 791 (1479)
Q Consensus 716 ~~~i~~-~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~il 791 (1479)
++.++. .|++||+.++... ......+ ...+.++.+.. ......+..+||||||||++||||++.+|+++
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l--~~~~~~~~~~LSgG~~qrl~la~al~~~p~ll 153 (220)
T cd03293 81 QDALLPWLTVLDNVALGLELQGVPKAEARE-----RAEELLELVGL--SGFENAYPHQLSGGMRQRVALARALAVDPDVL 153 (220)
T ss_pred ccccccCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCC--hhhhhCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 988765 7999999875321 1111111 11222333322 22345567899999999999999999999999
Q ss_pred EEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEe--CCEEEEecCh
Q 000463 792 LLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMR--EGMIVQSGRY 852 (1479)
Q Consensus 792 lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~--~G~i~~~g~~ 852 (1479)
||||||++||+.+++.+++.+.+... .|+|+|++||+++++.. ||++++|+ +|++++.++.
T Consensus 154 lLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 154 LLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 99999999999999999876665543 48999999999998764 89999999 7999987764
No 351
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-36 Score=343.29 Aligned_cols=199 Identities=22% Similarity=0.335 Sum_probs=173.6
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCC--------ccEEEEcCEecCCCChh
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS--------GGRIIIDGIDISLLGLH 1339 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~--------~G~I~IDG~dI~~i~l~ 1339 (1479)
++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRH--RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECC--EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 689999999964 35999999999999999999999999999999999999998 99999999999888888
Q ss_pred hhhcceEEEcCccc-cccccHhhhcCCCC--------CC---CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCc
Q 000463 1340 DLRSRFGIIPQEPV-LFEGTVRSNIDPIG--------QY---SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSV 1407 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~-LF~gTIR~NLdp~~--------~~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1407 (1479)
.+|+.++++||++. +|..|+++|+.... .. .++.++++++..++.+... .....|||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSg 148 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVG-----------RDVTTLSG 148 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCH
Confidence 88889999999986 67889999995321 11 2345778888888765432 23357999
Q ss_pred hHHHHHHHHHHhc---------cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEE
Q 000463 1408 GQRQLLCLGRVML---------KHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVV 1475 (1479)
Q Consensus 1408 GQrQrl~LARALL---------r~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL 1475 (1479)
|||||++|||||+ .+|++|||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|
T Consensus 149 G~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l 228 (272)
T PRK13547 149 GELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAML 228 (272)
T ss_pred HHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEE
Confidence 9999999999999 59999999999999999999999999998653 6899999999999975 9999999
Q ss_pred eCCC
Q 000463 1476 DAGL 1479 (1479)
Q Consensus 1476 ~~G~ 1479 (1479)
++|+
T Consensus 229 ~~G~ 232 (272)
T PRK13547 229 ADGA 232 (272)
T ss_pred ECCe
Confidence 9985
No 352
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-36 Score=335.61 Aligned_cols=201 Identities=21% Similarity=0.365 Sum_probs=163.4
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eEEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TTAY 712 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~iay 712 (1479)
|+++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEE
Confidence 478999999952 4699999999999999999999999999999999999999999999987 3799
Q ss_pred EeccCcCCC-CcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCC
Q 000463 713 VAQTSWIQN-GTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1479)
Q Consensus 713 v~Q~~~i~~-~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 788 (1479)
++|++.++. .|++||+.++... +....++ ...+-++.+... .....+..+||||||||++||||++.+|
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~--~~~~~~~~~LS~G~~qr~~la~al~~~p 150 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRE-----RIDELLDFVGLL--EAADRLVKTYSGGMRRRLEIARSLVHRP 150 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCH--HHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999987664 6999999875321 1111111 011223333222 1234567799999999999999999999
Q ss_pred CEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHH
Q 000463 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNAL 855 (1479)
Q Consensus 789 ~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 855 (1479)
+++||||||++||+++.+.+.+.+.+...+ |+|+|++||+++++.. ||++++|++|++++.|+++++
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 151 EVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999998766655554 8999999999999875 899999999999998887653
No 353
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.2e-35 Score=334.53 Aligned_cols=204 Identities=27% Similarity=0.445 Sum_probs=172.9
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1479)
...++++|+++.|++..+.++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 4579999999999643334699999999999999999999999999999999999999999999987
Q ss_pred eEEEEeccCcCCCCcHHHHHhcCCCCC-hhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 709 TTAYVAQTSWIQNGTIEENILFGLPMN-RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 709 ~iayv~Q~~~i~~~Tv~enI~fg~~~~-~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
.++|++|++.++..|++||+.++.... .....+..+...+.+.++.++.|..+.+++++.+|||||||||+||||++.+
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~ 168 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRN 168 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 279999999988899999999875421 1111222233345566777776767778889999999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEE
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMI 846 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i 846 (1479)
|+++||||||++||+++.+.+.+.+.+ +.+++|+|++||+++++..||+|++|++|++
T Consensus 169 p~llllDEPt~~LD~~~~~~l~~~l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 169 PQVLILDEATSALDAESEQQVQQALYD-WPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHH-HcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 999999999999999999998865554 3457899999999999878999999999974
No 354
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.5e-36 Score=332.64 Aligned_cols=189 Identities=28% Similarity=0.466 Sum_probs=156.3
Q ss_pred EEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----------eEEEEec
Q 000463 646 EVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----------TTAYVAQ 715 (1479)
Q Consensus 646 ~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------~iayv~Q 715 (1479)
+++|++++|++. +++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .++|++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q 78 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQ 78 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEec
Confidence 367899999531 4799999999999999999999999999999999999999999999987 3799999
Q ss_pred cC--cCCCCcHHHHHhcCCCCCh---hhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 716 TS--WIQNGTIEENILFGLPMNR---AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 716 ~~--~i~~~Tv~enI~fg~~~~~---~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
++ .+++.|++||+.++.+... ++..+. ++.+...+ .......+||||||||++||||++.+|++
T Consensus 79 ~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~---------l~~~~l~~--~~~~~~~~LS~G~~qrv~laral~~~p~l 147 (205)
T cd03226 79 DVDYQLFTDSVREELLLGLKELDAGNEQAETV---------LKDLDLYA--LKERHPLSLSGGQKQRLAIAAALLSGKDL 147 (205)
T ss_pred ChhhhhhhccHHHHHhhhhhhcCccHHHHHHH---------HHHcCCch--hcCCCchhCCHHHHHHHHHHHHHHhCCCE
Confidence 97 4567899999988643211 122222 23322221 23456779999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEE
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIV 847 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~ 847 (1479)
+||||||++||+.+.+.+.+.+.+...+|+|+|++||+++.+.. ||++++|++|+++
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 148 LIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999987665554568999999999999875 8999999999874
No 355
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-36 Score=341.94 Aligned_cols=205 Identities=28% Similarity=0.396 Sum_probs=173.8
Q ss_pred ccEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcC------EecCCCChh
Q 000463 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDG------IDISLLGLH 1339 (1479)
Q Consensus 1266 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG------~dI~~i~l~ 1339 (1479)
..++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| .++.+.+..
T Consensus 9 ~~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 9 DVFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred hheeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 35999999999964 4599999999999999999999999999999999999999986666554 677777777
Q ss_pred hhhcceEEEcCccccccc-cHhhhcCCC----CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1340 DLRSRFGIIPQEPVLFEG-TVRSNIDPI----GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~g-TIR~NLdp~----~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
.+|++++++||+|.+|.+ |+++|+... +...+ +.+.++++..++.+.+.. .....+..||+|||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYD-------RLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchh-------hhcCCcccCCHHHH
Confidence 889999999999999976 999999731 11122 335677788887653311 12234557999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||++||||++++|++|+|||||++||..+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|+
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~ 229 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGE 229 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999988778999999999999965 99999999985
No 356
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-36 Score=330.22 Aligned_cols=185 Identities=24% Similarity=0.309 Sum_probs=157.7
Q ss_pred cEEEEeeeeeecCC--CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC---CCccEEEEcCEecCCCChhhh
Q 000463 1267 NVDLIDLQVRYRSN--TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE---PSGGRIIIDGIDISLLGLHDL 1341 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~---p~~G~I~IDG~dI~~i~l~~L 1341 (1479)
.+.++|++|.|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 47899999999753 4579999999999999999999999999999999999999 89999999999998764 457
Q ss_pred hcceEEEcCccccccc-cHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhc
Q 000463 1342 RSRFGIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVML 1420 (1479)
Q Consensus 1342 R~~i~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL 1420 (1479)
|++++++||++.+|.+ |+++|+..... +. .+ +....||+|||||++|||||+
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~---------~~--------------~~----~~~~~LS~Ge~qrl~laral~ 134 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALR---------CK--------------GN----EFVRGISGGERKRVSIAEALV 134 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhh---------hc--------------cc----cchhhCCHHHHHHHHHHHHHh
Confidence 8899999999988875 99999963211 00 12 223469999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEE-ccChhhhhh-cCEEEEEeCCC
Q 000463 1421 KHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISI-AHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1421 r~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~I-AHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
++|+||+|||||++||+++.+.+.+.|++..+ ++|+|++ +|+.+.+.+ ||+|++|++|+
T Consensus 135 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~ 197 (202)
T cd03233 135 SRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGR 197 (202)
T ss_pred hCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCE
Confidence 99999999999999999999999999998754 4676665 455677755 99999999996
No 357
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.6e-36 Score=334.74 Aligned_cols=194 Identities=25% Similarity=0.412 Sum_probs=157.0
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe---------------
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------- 709 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------- 709 (1479)
++++|++++|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 6899999999532 246999999999999999999999999999999999999999999999872
Q ss_pred -EEEEeccCcCCC-CcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 710 -TAYVAQTSWIQN-GTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 710 -iayv~Q~~~i~~-~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
++|++|++.++. .|++||+.++... .....++ ...+.++.+... ........+|||||||||+||||+
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~--~~~~~~~~~LSgG~~qrv~laral 153 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANE-----RVSAALEKVGLE--GKAHALPMQLSGGEQQRVAIARAI 153 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCh--hhhhCChhhCCHHHHHHHHHHHHH
Confidence 699999988764 6999999876321 1111111 111222333221 223456679999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEE
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMI 846 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i 846 (1479)
+.+|+++||||||++||+.+++.+.+.+.+...+|+|+|++||+++++.. ||++++|++|++
T Consensus 154 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 154 VHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999987665544568999999999999875 899999999975
No 358
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2e-35 Score=328.07 Aligned_cols=189 Identities=27% Similarity=0.401 Sum_probs=162.5
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------e
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------T 709 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ 709 (1479)
..++++|++++|+.. ..++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 468999999999642 24799999999999999999999999999999999999999999999987 3
Q ss_pred EEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCC
Q 000463 710 TAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1479)
Q Consensus 710 iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 789 (1479)
++|++|+|.++++|++||+.+...++. +++.++. + +++++.+||||||||++||||++.+|+
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~~~~---~~~~~~l------~---------~~~~~~~LS~G~~qrv~laral~~~p~ 145 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDEYSD---EEIYGAL------R---------VSEGGLNLSQGQRQLLCLARALLKRPR 145 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCCCCH---HHHHHHh------h---------ccCCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 899999999988999999976543321 2222211 1 346788999999999999999999999
Q ss_pred EEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecC
Q 000463 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGR 851 (1479)
Q Consensus 790 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~ 851 (1479)
++||||||++||+.+.+.+.+.+.+. .+|+|+|++||+++.+..+|++++|++|++.+.|+
T Consensus 146 llllDEP~~~LD~~~~~~l~~~l~~~-~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 146 VLVLDEATASIDYATDALIQKTIREE-FTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHh-cCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 99999999999999999888655544 46899999999999987799999999999988775
No 359
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=336.23 Aligned_cols=204 Identities=26% Similarity=0.394 Sum_probs=167.9
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1479)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| .+
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSF---GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 478999999995 24699999999999999999999999999999999999999999999987 27
Q ss_pred EEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 711 AYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 711 ayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
+|++|++.++..|++||+.++.........+ ..+-++.+... .....+.+.+||||||||++||||++.+|++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~------~~~~l~~~~l~-~~~~~~~~~~LS~G~~qrl~la~al~~~p~l 152 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVD------VEYYLSIVGLN-KEYATRDVKNLSGGEAQRVSIARTLANNPEV 152 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHH------HHHHHHHcCCC-HHHhhCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999888889999998864322110011 11122222221 0123456789999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+||||||++||+.+.+.+.+.+.+... .|+|+|++||+++++.. ||+|++|++|++++.|+++++..
T Consensus 153 lllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 153 LLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 999999999999999988876655444 38999999999999875 89999999999999999988765
No 360
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=342.53 Aligned_cols=204 Identities=32% Similarity=0.476 Sum_probs=168.3
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------E
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------T 710 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------i 710 (1479)
++++|++++|+. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 689999999953 346999999999999999999999999999999999999999999998872 7
Q ss_pred EEEeccCc--CCCCcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHh
Q 000463 711 AYVAQTSW--IQNGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1479)
Q Consensus 711 ayv~Q~~~--i~~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 785 (1479)
+|++|+|. +++.|++|||.++... +.....+. ..+-++.+.. .......+.+||||||||++||||++
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~gl--~~~~~~~~~~LS~G~~qrv~laral~ 152 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKR-----VDRALAEIGL--EKYRHRSPKTLSGGQGQCVALAGILT 152 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHCCC--HHHhcCCcccCCHHHHHHHHHHHHHH
Confidence 99999986 5678999999886421 11111111 1122233322 22345677899999999999999999
Q ss_pred cCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHh
Q 000463 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 786 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
.+|+++||||||++||+.++..+++.+.+...+|+|+|++||+++.++.||+|++|++|++++.|+++++..
T Consensus 153 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 153 MEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999998766555456899999999999988899999999999999999888754
No 361
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.1e-35 Score=338.50 Aligned_cols=206 Identities=32% Similarity=0.423 Sum_probs=165.2
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe---------------
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------- 709 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------- 709 (1479)
++++|++++|+. ++++|+|+||++++||+++|+||||||||||+++|+|..+|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 678999999951 346999999999999999999999999999999999999999999999872
Q ss_pred -EEEEeccCcCCC-CcHHHHHhcCCCCChh-------hHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHH
Q 000463 710 -TAYVAQTSWIQN-GTIEENILFGLPMNRA-------KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 710 -iayv~Q~~~i~~-~Tv~enI~fg~~~~~~-------~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1479)
++|++|++.++. .|++||+.++...... .+.+. ......+-++.+. ........+.+||||||||++|
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~--l~~~~~~~~~~LSgG~~qrv~l 156 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEE-DKERALSALERVG--LADKAYQRADQLSGGQQQRVAI 156 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHH-HHHHHHHHHHHcC--cHhhhcCCcccCCHHHHHHHHH
Confidence 799999987764 7999999876421000 00000 0011122233332 2223456778999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHH
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNAL 855 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l 855 (1479)
|||++.+|+++||||||++||+.+.+.+.+.+.+... .|+|+|++||+++++. .||++++|++|++++.|+++++
T Consensus 157 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 157 ARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 9999999999999999999999999999876655444 3899999999999986 4899999999999999998775
No 362
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.1e-36 Score=300.81 Aligned_cols=195 Identities=28% Similarity=0.473 Sum_probs=174.3
Q ss_pred eeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCcccc
Q 000463 1275 VRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVL 1354 (1479)
Q Consensus 1275 ~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~L 1354 (1479)
.+|.....++|+|+||++.+||.++|.||||||||||++.+.-+..|++|.++..|.|+++++++.+|++++|+.|.|.|
T Consensus 9 ~~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paL 88 (223)
T COG4619 9 VGYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPAL 88 (223)
T ss_pred HHhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccc
Confidence 45666666799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccHhhhcC-CC----CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEe
Q 000463 1355 FEGTVRSNID-PI----GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMD 1429 (1479)
Q Consensus 1355 F~gTIR~NLd-p~----~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLD 1429 (1479)
|.+||.+|+- |+ ...+...-.+.|+++++.+.+-.+ +-.+||||||||++|+|-|---|+||+||
T Consensus 89 fg~tVeDNlifP~~~r~rr~dr~aa~~llar~~l~~~~L~k----------~it~lSGGE~QriAliR~Lq~~P~ILLLD 158 (223)
T COG4619 89 FGDTVEDNLIFPWQIRNRRPDRAAALDLLARFALPDSILTK----------NITELSGGEKQRIALIRNLQFMPKILLLD 158 (223)
T ss_pred cccchhhccccchHHhccCCChHHHHHHHHHcCCchhhhcc----------hhhhccchHHHHHHHHHHhhcCCceEEec
Confidence 9999999995 43 234556667778888887765333 34579999999999999999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhh-hhhcCEEEEEeCCC
Q 000463 1430 EATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPT-VMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1430 EaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~t-i~~~DrIlVL~~G~ 1479 (1479)
|+||+||..+.+.|.+.|.+++ ++..++.|||+-+. +..+||++-+..|+
T Consensus 159 E~TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~ 211 (223)
T COG4619 159 EITSALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGH 211 (223)
T ss_pred CchhhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCc
Confidence 9999999999999999999988 46789999999988 77799999998874
No 363
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.8e-35 Score=335.21 Aligned_cols=207 Identities=21% Similarity=0.371 Sum_probs=169.1
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------EEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------TAY 712 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------iay 712 (1479)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|..+|++|+|.++|. ++|
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYG---ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGV 78 (236)
T ss_pred EEEEeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEE
Confidence 68899999995 357999999999999999999999999999999999999999999999872 799
Q ss_pred EeccCcC-CCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEE
Q 000463 713 VAQTSWI-QNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIY 791 (1479)
Q Consensus 713 v~Q~~~i-~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~il 791 (1479)
++|++.+ +..|++||+.++.........+.. ....+-++.+ |.....++++.+||||||||++||||++.+|+++
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~--~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~p~ll 154 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR--ERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHRPALL 154 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH--HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999877 578999999875321110001100 0112223333 2223456778899999999999999999999999
Q ss_pred EEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhc
Q 000463 792 LLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 792 lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
||||||++||+.+.+.+.+.+.+... +|+|+|++||+++++..||++++|++|++++.|+++++.+.
T Consensus 155 llDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 155 LLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred EEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999876655543 58999999999999888999999999999999998887653
No 364
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.1e-35 Score=330.27 Aligned_cols=192 Identities=22% Similarity=0.363 Sum_probs=159.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------eEEEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------TTAYV 713 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~iayv 713 (1479)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| .++|+
T Consensus 1 l~~~~l~~~~~---~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 77 (208)
T cd03268 1 LKTNDLTKTYG---KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGAL 77 (208)
T ss_pred CEEEEEEEEEC---CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEe
Confidence 46899999995 34799999999999999999999999999999999999999999999987 37899
Q ss_pred eccCcCC-CCcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCC
Q 000463 714 AQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1479)
Q Consensus 714 ~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 789 (1479)
+|++.++ +.|++||+.++... ++++.++.++..++. ....+++.+|||||||||+||||++.+|+
T Consensus 78 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~la~al~~~p~ 146 (208)
T cd03268 78 IEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLK-----------DSAKKKVKGFSLGMKQRLGIALALLGNPD 146 (208)
T ss_pred cCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCH-----------HHHhhhHhhCCHHHHHHHHHHHHHhcCCC
Confidence 9998766 67999999875321 122222222222222 12345678999999999999999999999
Q ss_pred EEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEec
Q 000463 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1479)
Q Consensus 790 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1479)
++||||||++||+.+.+.+++.+.+...+|+|+|++||+++++.. ||++++|++|++++.|
T Consensus 147 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 147 LLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999987665544468999999999999875 8999999999998754
No 365
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=9.1e-36 Score=341.12 Aligned_cols=200 Identities=21% Similarity=0.359 Sum_probs=168.5
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCC----CccEEEEcCEecCCCChhhhh
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP----SGGRIIIDGIDISLLGLHDLR 1342 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p----~~G~I~IDG~dI~~i~l~~LR 1342 (1479)
.++++|++++| + .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..+
T Consensus 4 ~l~~~~l~~~~--~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA--A-QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe--c-cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 58999999999 2 3599999999999999999999999999999999999999 999999999998632 2234
Q ss_pred cceEEEcCccc-ccc--ccHhhhcCC----CC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHH
Q 000463 1343 SRFGIIPQEPV-LFE--GTVRSNIDP----IG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1479)
Q Consensus 1343 ~~i~iIpQdp~-LF~--gTIR~NLdp----~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1414 (1479)
++++++||+|. .|. .|+.+|+.. .+ ...+++++++++.+++.+.. +.+......||+|||||++
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~--------~~~~~~~~~LS~Gq~qrv~ 150 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENAA--------RVLKLYPFEMSGGMLQRMM 150 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCChh--------hhhhcCCcccCHHHHHHHH
Confidence 67999999985 443 477777531 11 23456789999999886531 1223344579999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1415 LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|||||+++|+||||||||++||..+.+.+.+.|++..+ ++|||+|+|+++.+.+ ||||++|++|+
T Consensus 151 laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~ 218 (254)
T PRK10418 151 IALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGR 218 (254)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999998753 7899999999999976 99999999985
No 366
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=340.12 Aligned_cols=206 Identities=27% Similarity=0.400 Sum_probs=166.7
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC---------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG--------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g--------- 708 (1479)
..++++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (253)
T PRK14242 5 PKMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD 81 (253)
T ss_pred cEEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC
Confidence 46899999999952 469999999999999999999999999999999999864 5899999876
Q ss_pred ------eEEEEeccCcCCCCcHHHHHhcCCCC----ChhhHHHHHHHhchHHHHHhcccCC--ccccccCCCccchHHHH
Q 000463 709 ------TTAYVAQTSWIQNGTIEENILFGLPM----NRAKYGEVVRVCCLEKDLEMMEYGD--QTEIGERGINLSGGQKQ 776 (1479)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~~----~~~~~~~v~~~~~l~~dl~~l~~gd--~t~ig~~g~~LSGGQkq 776 (1479)
.++|++|++.+++.|++||+.++... ..+..++. ....++.+...+ ....++.+.+|||||||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~q 156 (253)
T PRK14242 82 VVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAER-----VERSLRHAALWDEVKDRLHESALGLSGGQQQ 156 (253)
T ss_pred HHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHH-----HHHHHHHcCCchhhhHHhhCCcccCCHHHHH
Confidence 27999999988888999999886321 11111111 111122221111 12345678899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHH
Q 000463 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNAL 855 (1479)
Q Consensus 777 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 855 (1479)
||+||||++.+|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++++.. ||++++|++|++++.|+++++
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~-~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHEL-KARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-hcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999988765544 457999999999999865 999999999999999999887
Q ss_pred Hh
Q 000463 856 LN 857 (1479)
Q Consensus 856 ~~ 857 (1479)
.+
T Consensus 236 ~~ 237 (253)
T PRK14242 236 FT 237 (253)
T ss_pred Hc
Confidence 64
No 367
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=6.9e-36 Score=334.52 Aligned_cols=198 Identities=31% Similarity=0.407 Sum_probs=158.6
Q ss_pred EEEEeeEEEecCCC-CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------
Q 000463 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------- 708 (1479)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 708 (1479)
++++|++++|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46899999996321 14799999999999999999999999999999999999999999998876
Q ss_pred --eEEEEeccCcCCC-CcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHh
Q 000463 709 --TTAYVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1479)
Q Consensus 709 --~iayv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 785 (1479)
.++|++|++.++. .|++||+.++.........+. .....+.++.+. .......++.+|||||||||+||||++
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~--~~~~~~~l~~~~--l~~~~~~~~~~LS~G~~qrv~la~al~ 156 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER--RERAEELLERVG--LGDRLNHYPSELSGGQQQRVAIARALA 156 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH--HHHHHHHHHHcC--CchhhhcChhhcCHHHHHHHHHHHHHc
Confidence 3799999988775 599999998643211000000 011222333332 223345677899999999999999999
Q ss_pred cCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccccCCEEEEEeCCEE
Q 000463 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREGMI 846 (1479)
Q Consensus 786 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~~D~i~~l~~G~i 846 (1479)
.+|+++||||||++||+.+++.+.+.+.+... +|+|+|++||+++++..||++++|++|++
T Consensus 157 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 157 NDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999876655544 48999999999998878999999999974
No 368
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=8.5e-36 Score=335.53 Aligned_cols=198 Identities=21% Similarity=0.368 Sum_probs=164.8
Q ss_pred EEEEeeeeeecCC--CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC---CCccEEEEcCEecCCCChhhhh
Q 000463 1268 VDLIDLQVRYRSN--TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE---PSGGRIIIDGIDISLLGLHDLR 1342 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~---p~~G~I~IDG~dI~~i~l~~LR 1342 (1479)
++|+||+++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ....|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999765 3679999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cceEEEcCccccccc-cHhhhcCCC---C--CCCHH-----HHHH-HHHHcCchHHHHhCcCCccccccCCCCCCCchHH
Q 000463 1343 SRFGIIPQEPVLFEG-TVRSNIDPI---G--QYSDE-----EIWK-SLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1343 ~~i~iIpQdp~LF~g-TIR~NLdp~---~--~~sd~-----eI~~-aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
++++++||++.+|.+ |+++|+... . ...++ .+.+ .++..++.+. ......+||+|||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~ 149 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRI-----------GGNLVKGISGGER 149 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhh-----------hcccccCcCHHHH
Confidence 899999999999988 999999631 1 11111 1222 3444444322 2233457999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccCh-hhhhh-cCEEEEEeCCC
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRI-PTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl-~ti~~-~DrIlVL~~G~ 1479 (1479)
||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|+|+++|++ +.+.. ||+|++|++|+
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~ 221 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGE 221 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCE
Confidence 99999999999999999999999999999999999999864 478999999998 46654 99999999996
No 369
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=342.32 Aligned_cols=208 Identities=27% Similarity=0.430 Sum_probs=170.4
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1479)
..++++|+++.|+. ..+++|+|+||+|++||+++|+|+||||||||+++|+|..+|++|+|.++|.
T Consensus 4 ~~l~~~~l~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (279)
T PRK13635 4 EIIRVEHISFRYPD-AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQ 82 (279)
T ss_pred ceEEEEEEEEEeCC-CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhh
Confidence 36899999999953 2346999999999999999999999999999999999999999999999883
Q ss_pred EEEEeccC--cCCCCcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 710 TAYVAQTS--WIQNGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 710 iayv~Q~~--~i~~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
++|++|++ .+++.|++|||.++... ..+..++ ...+-++.+.. ...+.....+||||||||++||||+
T Consensus 83 i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~gL--~~~~~~~~~~LS~G~~qrv~laral 155 (279)
T PRK13635 83 VGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVE-----RVDQALRQVGM--EDFLNREPHRLSGGQKQRVAIAGVL 155 (279)
T ss_pred eEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHH-----HHHHHHHHcCC--hhhhhCCcccCCHHHHHHHHHHHHH
Confidence 79999998 46678999999986321 1111111 11122222221 1234566779999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhc
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
+.+|+++||||||++||+.+++.+++.+.+...+ |+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 156 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 156 ALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999998766555544 8999999999999888999999999999999998887653
No 370
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.1e-35 Score=333.92 Aligned_cols=195 Identities=27% Similarity=0.456 Sum_probs=170.9
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... . ++++++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~---~-~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRK---D-LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccc---c-cccEEE
Confidence 478999999974 3599999999999999999999999999999999999999999999999987532 2 357999
Q ss_pred EcCcccccc-ccHhhhcCC---CCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCC
Q 000463 1348 IPQEPVLFE-GTVRSNIDP---IGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1479)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp---~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1423 (1479)
+||++.+|. .|+++|+.. ....+++++.++++..++.+.....+ .+||+|||||++||||++++|
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~~rv~laral~~~p 143 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGKKKA-----------KQFSLGMKQRLGIAIALLNHP 143 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHhhhH-----------hhCCHHHHHHHHHHHHHhcCC
Confidence 999998886 599999963 12345678899999999987654332 368999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1424 RLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1424 ~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
++|+|||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||||++|++|+
T Consensus 144 ~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 201 (223)
T TIGR03740 144 KLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGV 201 (223)
T ss_pred CEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCE
Confidence 9999999999999999999999999864 47899999999999865 99999999985
No 371
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=345.06 Aligned_cols=208 Identities=24% Similarity=0.393 Sum_probs=167.6
Q ss_pred cEEEEeeEEEecCCC--CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------
Q 000463 644 AVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------ 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------ 709 (1479)
.|+++|+++.|++.. .+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999996321 246999999999999999999999999999999999999999999999873
Q ss_pred -----EEEEeccC--cCCCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHH
Q 000463 710 -----TAYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 779 (1479)
Q Consensus 710 -----iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 779 (1479)
++|++|+| .+++.|++|||.++.. ...+...+ + ..+-++.+... ......+..+||||||||++
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~--~---~~~~l~~~gL~-~~~~~~~~~~LSgGq~qrl~ 155 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE--K---ALKWLKKVGLS-EDLISKSPFELSGGQMRRVA 155 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH--H---HHHHHHHcCCC-hhHhhCCcccCCHHHHHHHH
Confidence 68999997 4667899999987632 11111111 1 11223332211 01235677899999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000463 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 780 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
||||++.+|+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++++. .||++++|++|++++.|+++++.+
T Consensus 156 laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 156 IAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999988765554446899999999999986 499999999999999999888754
No 372
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=338.06 Aligned_cols=207 Identities=29% Similarity=0.408 Sum_probs=165.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----------------
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------------- 708 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------- 708 (1479)
++++|++++|++ ++++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 468899999953 25799999999999999999999999999999999999999999999876
Q ss_pred eEEEEeccCcCCC-CcHHHHHhcCCCCChh-------hHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHH
Q 000463 709 TTAYVAQTSWIQN-GTIEENILFGLPMNRA-------KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 709 ~iayv~Q~~~i~~-~Tv~enI~fg~~~~~~-------~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1479)
.++|++|++.++. .|++||+.++...... ...+. ......+.++.+.. ......++.+|||||||||+|
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l--~~~~~~~~~~LS~G~~qrv~l 155 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKE-EKQRALAALERVGL--LDKAYQRADQLSGGQQQRVAI 155 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHH-HHHHHHHHHHHcCC--hhhhCCCcccCCHHHHHHHHH
Confidence 2789999987664 7999999876321000 00000 00011122333322 223456788999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHH
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALL 856 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~ 856 (1479)
|||++.+|+++||||||++||+.+.+.+++.+.+... .|+|+|++||+++.+. .||++++|++|++++.|+++++.
T Consensus 156 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 156 ARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 9999999999999999999999999999876665544 4899999999999987 59999999999999999988763
No 373
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.5e-35 Score=327.31 Aligned_cols=194 Identities=21% Similarity=0.341 Sum_probs=169.4
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ..+|+++++
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 478999999964 35899999999999999999999999999999999999999999999999987543 467889999
Q ss_pred EcCccccc-cccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCE
Q 000463 1348 IPQEPVLF-EGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRL 1425 (1479)
Q Consensus 1348 IpQdp~LF-~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1425 (1479)
+||++.++ ..|+++|+... ....++++.++++..++.+..... ..+||||||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~laral~~~p~l 146 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFEDRP-----------VAQLSAGQQRRVALARLLLSGRPL 146 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhhhcCc-----------hhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999876 57999999643 234677889999999997654322 246999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEE
Q 000463 1426 LFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVV 1475 (1479)
Q Consensus 1426 LiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL 1475 (1479)
|||||||++||+.+.+.+.+.|++.. +++|+|+|||+...+.+ ||+++++
T Consensus 147 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 147 WILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999999999999998754 47999999998776655 9999987
No 374
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.1e-35 Score=334.02 Aligned_cols=203 Identities=29% Similarity=0.423 Sum_probs=165.0
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------eE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------TT 710 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~i 710 (1479)
++++|++++|++ +++++|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 468999999952 4799999999999999999999999999999999999999999999887 27
Q ss_pred EEEeccCcCCC-CcHHHHHhcCCCCCh-hhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCC
Q 000463 711 AYVAQTSWIQN-GTIEENILFGLPMNR-AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1479)
Q Consensus 711 ayv~Q~~~i~~-~Tv~enI~fg~~~~~-~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 788 (1479)
+|++|++.++. .|++||+.++..... ....+. ..+-++.++ +.......++.+||||||||++||||++.+|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKAR-----LERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHH-----HHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 99999987766 599999988653221 111111 111122221 0112345678899999999999999999999
Q ss_pred CEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHH
Q 000463 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALL 856 (1479)
Q Consensus 789 ~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~ 856 (1479)
+++||||||++||+.+++.+.+.+.+...+|+|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999987665554468999999999998765 8999999999999999887764
No 375
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=3.5e-35 Score=333.97 Aligned_cols=161 Identities=24% Similarity=0.416 Sum_probs=126.3
Q ss_pred EEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCcc-ccccccHhhhcCCCC--
Q 000463 1291 SIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEP-VLFEGTVRSNIDPIG-- 1367 (1479)
Q Consensus 1291 ~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp-~LF~gTIR~NLdp~~-- 1367 (1479)
+|..||.+||+||||-||||++++|.|.++|++|. ..++ +++|=||-- .-|+|||++-|.-..
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~~----------~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EEDL----------KVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Cccc----------eEeecceeecCCCCCcHHHHHHHhhhh
Confidence 45677899999999999999999999999999998 3333 688999975 348999998774211
Q ss_pred CCCHHHHH-HHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHH
Q 000463 1368 QYSDEEIW-KSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRI 1446 (1479)
Q Consensus 1368 ~~sd~eI~-~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~ 1446 (1479)
.+.+.-.+ +..+ |-.++-.+...-.+|||||.||+++|-||.|++++.+||||+|.||.+..-.+-++
T Consensus 429 ~~~~s~~~~ei~~-----------pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakv 497 (591)
T COG1245 429 AFGSSYFKTEIVK-----------PLNLEDLLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKV 497 (591)
T ss_pred hcccchhHHhhcC-----------ccchHHHHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHH
Confidence 12221111 1222 33333333333457999999999999999999999999999999999999999999
Q ss_pred HHHHc--CCcEEEEEccChhhhhh-cCEEEEEe
Q 000463 1447 IREEF--AACTIISIAHRIPTVMD-CDRVIVVD 1476 (1479)
Q Consensus 1447 I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~ 1476 (1479)
||+.. .++|.++|-|++-.+.. +||++|.+
T Consensus 498 IRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~ 530 (591)
T COG1245 498 IRRFIENNEKTALVVDHDIYMIDYVSDRLIVFE 530 (591)
T ss_pred HHHHHhhcCceEEEEecceehhhhhhceEEEEe
Confidence 98854 57899999999998877 99999986
No 376
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.5e-33 Score=308.77 Aligned_cols=498 Identities=19% Similarity=0.200 Sum_probs=322.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-c---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 319 RTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSS-F---YEGYYLVLILLVAKFVEVFSTHQFNFNSQ 394 (1479)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~-~---~~g~~l~~~l~~~~~~~~~~~~~~~~~~~ 394 (1479)
.-.++|.+++.++....+.+...+. +-.+|-.+-+++-+.+.. . .+-.++...++++..+ ++.-..+..+
T Consensus 4 ll~llr~nr~~~i~~~a~s~a~g~~---g~~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~i---s~lg~t~~gq 77 (546)
T COG4615 4 LLLLLRQNRWPFISVMALSLASGAL---GIGLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLI---SQLGLTTLGQ 77 (546)
T ss_pred HHHHhcccccHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 4467888888887666665554433 333444344444322211 1 0111111222222222 2222222222
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000463 395 KLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVITT 474 (1479)
Q Consensus 395 ~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~g 474 (1479)
..-.++|.-+ -+|.+.-+-....+.+.+.++.-++.|+..|.-....+.++-.+.+-+..+...|+..-+...+..
T Consensus 78 ~~I~klr~~~----~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~ 153 (546)
T COG4615 78 HFIYKLRSEF----IKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLT 153 (546)
T ss_pred HHHHHHHHHH----HHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 3333455444 456665555555566788899999999999997777777666555545555566666666777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH--HHHHHHH-HHHHHHHHHHHHHHHHHH
Q 000463 475 VVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWE--DHFNKRI-LSFRESEFGWLTKFMYSI 551 (1479)
Q Consensus 475 l~~~il~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE--~~f~~~I-~~~R~~El~~l~k~~~~~ 551 (1479)
++.+++.+..+.+..++..++..+-.+.-|+-.+..+.++.|-|-+|++.=. ..+.+.+ .+.++.|- ...+..
T Consensus 154 vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~~r~----~~~~~n 229 (546)
T COG4615 154 VVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQEYRH----HIIRAN 229 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHHHHh----hhhhhh
Confidence 8888888888888877777777777888888899999999999999987632 2222222 22222221 111211
Q ss_pred HHH-HHHHHHHHHHHHHHH--HHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 000463 552 SGN-IIVMWSTPVLISTLT--FATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSREL 628 (1479)
Q Consensus 552 a~~-~~~~~~~p~~v~~~t--F~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~ 628 (1479)
..+ ....|..-.+.+++. |......+=+ +...+.|....+-.|+.|+.++...++.+.+|.|+++||.++=..|+.
T Consensus 230 ~f~~la~~~~ni~l~~lIGlvf~lal~~~w~-st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~ 308 (546)
T COG4615 230 TFHLLAVNWSNIMLLGLIGLVFWLALSLGWA-STNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYK 308 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-hhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCcc
Confidence 111 223344333333333 3333222211 112344444445568999999999999999999999999998775554
Q ss_pred cccccccccCCCCCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC
Q 000463 629 VNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG 708 (1479)
Q Consensus 629 ~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g 708 (1479)
.+-..+ .+.+ +-..++++|+.|+|.+. ..-+..||++|++||+|-|+|.||||||||++.+.|+++|++|+|.++|
T Consensus 309 a~~~~~-q~~p-~~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I~ldg 384 (546)
T COG4615 309 ADFPRP-QAFP-DWKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDG 384 (546)
T ss_pred ccCCCC-CcCC-cccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCceeECC
Confidence 322111 1111 23579999999999743 3678899999999999999999999999999999999999999999999
Q ss_pred eE-------------EEEeccCcCCCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccC---CCccc
Q 000463 709 TT-------------AYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGER---GINLS 771 (1479)
Q Consensus 709 ~i-------------ayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~---g~~LS 771 (1479)
+. +-|+-+-|+|..++ -+.. -.++..++- ++.++....|.+.++ ...||
T Consensus 385 ~pV~~e~ledYR~LfSavFsDyhLF~~ll-----~~e~~as~q~i~~~---------LqrLel~~ktsl~d~~fs~~kLS 450 (546)
T COG4615 385 KPVSAEQLEDYRKLFSAVFSDYHLFDQLL-----GPEGKASPQLIEKW---------LQRLELAHKTSLNDGRFSNLKLS 450 (546)
T ss_pred ccCCCCCHHHHHHHHHHHhhhHhhhHhhh-----CCccCCChHHHHHH---------HHHHHHhhhhcccCCcccccccc
Confidence 63 12223333332211 1111 112222222 222222222333222 24699
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhh-cCCcEEEEEccCCcccccCCEEEEEeCCEEEEe
Q 000463 772 GGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGA-LKGKTIILVTHQVDFLHNVDLILVMREGMIVQS 849 (1479)
Q Consensus 772 GGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~ 849 (1479)
-|||.|+++--|+..+.|||+|||=-+.-||+-++..++..+-.+ .+|||++.||||-.+...|||++.|++|++++.
T Consensus 451 tGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 451 TGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred cchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 999999999999999999999999999999999999998887544 469999999999999999999999999999874
No 377
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-35 Score=316.47 Aligned_cols=207 Identities=29% Similarity=0.433 Sum_probs=176.9
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1479)
.++++|++..|.. .++|++|||++++||+++|+|+||+||||||++|.|..++.+|+|.++|.
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 5789999999953 57999999999999999999999999999999999999999999999984
Q ss_pred EEEEeccCcCC-CCcHHHHHhcCCCCChh-hHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 710 TAYVAQTSWIQ-NGTIEENILFGLPMNRA-KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~~~~~-~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
++||||.-.+| +.||+||+..|....+. ... ...+++-++.+|.- ......++.+|||||||.++|||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~----~~~~e~v~~lFP~L-ker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQ----ERDLEEVYELFPRL-KERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccccc----cccHHHHHHHChhH-HHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 79999998887 57999999998543322 111 11144556677742 2245678999999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccc-ccCCEEEEEeCCEEEEecChHHHHhc
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFL-HNVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l-~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
|++++||||+.+|-|...++||+.+.+...+ |.||++|.++..+. +.+||.++|++|+|+.+|+.+|+.++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 9999999999999999999999877666544 77999999999985 56999999999999999999998764
No 378
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=342.02 Aligned_cols=200 Identities=23% Similarity=0.392 Sum_probs=172.3
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCC---ccEEEEcCEecCCCC-----h
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS---GGRIIIDGIDISLLG-----L 1338 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~---~G~I~IDG~dI~~i~-----l 1338 (1479)
-++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+ .
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 4899999999963 45999999999999999999999999999999999999986 499999999987542 3
Q ss_pred hhhhcceEEEcCccccccc-cHhhhcCCCC---------------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCC
Q 000463 1339 HDLRSRFGIIPQEPVLFEG-TVRSNIDPIG---------------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSG 1402 (1479)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~g-TIR~NLdp~~---------------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1402 (1479)
..+|++++++||++.+|.+ |+++|+.... ...++++.++++..++.+..... .
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~ 150 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQR-----------V 150 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCC-----------c
Confidence 5678899999999998875 9999996210 11234678888888887655433 2
Q ss_pred CCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1403 DNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1403 ~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
.+||+|||||++||||++.+|++|||||||++||.++.+.+.+.|++..+ ++|||+|+|+++.+.. ||||++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~ 230 (262)
T PRK09984 151 STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGH 230 (262)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 46899999999999999999999999999999999999999999998753 7899999999998766 99999999985
No 379
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=6.3e-36 Score=328.08 Aligned_cols=177 Identities=24% Similarity=0.437 Sum_probs=157.3
Q ss_pred cEEEEeeeeeecCC----CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccC--CCCccEEEEcCEecCCCChhh
Q 000463 1267 NVDLIDLQVRYRSN----TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLV--EPSGGRIIIDGIDISLLGLHD 1340 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~----~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--~p~~G~I~IDG~dI~~i~l~~ 1340 (1479)
.++++|++++|+.. ..++|+|+||+|++||++||+|++|||||||+++|.|++ +|++|+|.+||.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 58999999999752 246999999999999999999999999999999999999 9999999999999874 36
Q ss_pred hhcceEEEcCccccccc-cHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1341 LRSRFGIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1341 LR~~i~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
.|++++++||++.+|.+ |+++|+... . ... .||+|||||++|||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~---------~---~~~---------------------~LS~G~~qrv~laral 126 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFA---------A---KLR---------------------GLSGGERKRVSIALEL 126 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHH---------H---Hhc---------------------cCCHHHHHHHHHHHHH
Confidence 78899999999998875 999998411 0 000 6999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChh-hhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIP-TVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~-ti~~-~DrIlVL~~G~ 1479 (1479)
+++|++|+|||||++||..+.+.+.+.|++.. +++|+|+|+|+++ .+.+ ||+|++|++|+
T Consensus 127 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~ 189 (194)
T cd03213 127 VSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGR 189 (194)
T ss_pred HcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCE
Confidence 99999999999999999999999999999865 4789999999997 5654 99999999985
No 380
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.7e-35 Score=346.91 Aligned_cols=205 Identities=27% Similarity=0.413 Sum_probs=168.4
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eE
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TT 710 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~i 710 (1479)
..|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 3 ~~i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i 79 (303)
T TIGR01288 3 VAIDLVGVSKSYG---DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAI 79 (303)
T ss_pred cEEEEEeEEEEeC---CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcE
Confidence 4689999999995 34699999999999999999999999999999999999999999999987 37
Q ss_pred EEEeccCcCC-CCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhc
Q 000463 711 AYVAQTSWIQ-NGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQ 786 (1479)
Q Consensus 711 ayv~Q~~~i~-~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~ 786 (1479)
+|+||++.++ ..|++||+.+... .+....++. ..+-++.+... .....+..+||||||||++||||++.
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~~l~--~~~~~~~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFARLE--SKADVRVALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHCCCh--hHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 9999998776 5799999975211 111111111 11222222221 22345677999999999999999999
Q ss_pred CCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 787 DCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 787 ~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+|+++||||||++||+.+++.+++.+.+...+|+|+|++||+++++.. ||+|++|++|+++..|+++++.+
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999987666655568999999999999865 99999999999999999988764
No 381
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=351.59 Aligned_cols=202 Identities=24% Similarity=0.400 Sum_probs=171.3
Q ss_pred cEEEEeeeeeecC--CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCC----CCccEEEEcCEecCCCChhh
Q 000463 1267 NVDLIDLQVRYRS--NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE----PSGGRIIIDGIDISLLGLHD 1340 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~--~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~----p~~G~I~IDG~dI~~i~l~~ 1340 (1479)
-++++|++++|+. +...+|+||||+|++||.+||+|+||||||||+++|.|+.+ |++|+|.+||.|+.+++.++
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3789999999953 22459999999999999999999999999999999999986 58999999999999888776
Q ss_pred hh----cceEEEcCccc--cc-cccHhhhcC-C---C---CC------CCHHHHHHHHHHcCchHH---HHhCcCCcccc
Q 000463 1341 LR----SRFGIIPQEPV--LF-EGTVRSNID-P---I---GQ------YSDEEIWKSLERCQLKDV---VAAKPDKLDSL 1397 (1479)
Q Consensus 1341 LR----~~i~iIpQdp~--LF-~gTIR~NLd-p---~---~~------~sd~eI~~aL~~~~L~~~---i~~lp~gLdt~ 1397 (1479)
++ ++|++|||+|. ++ ..||.+|+. + . +. ..++++.++|++++|.+. ....|
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p------ 156 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFP------ 156 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCc------
Confidence 53 47999999996 33 348888874 1 1 10 113568889999999743 22333
Q ss_pred ccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEE
Q 000463 1398 VADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIV 1474 (1479)
Q Consensus 1398 v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlV 1474 (1479)
..||||||||++|||||+.+|+|||+||||++||+.+...|.+.|++..+ +.|+|+|||+++.+.. ||||+|
T Consensus 157 -----~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~v 231 (330)
T PRK15093 157 -----YELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINV 231 (330)
T ss_pred -----hhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 46899999999999999999999999999999999999999999998654 7899999999999977 999999
Q ss_pred EeCCC
Q 000463 1475 VDAGL 1479 (1479)
Q Consensus 1475 L~~G~ 1479 (1479)
|++|+
T Consensus 232 m~~G~ 236 (330)
T PRK15093 232 LYCGQ 236 (330)
T ss_pred EECCE
Confidence 99995
No 382
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.5e-35 Score=355.11 Aligned_cols=205 Identities=24% Similarity=0.389 Sum_probs=170.5
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1479)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| ++
T Consensus 3 ~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 588999999995 35799999999999999999999999999999999999999999999988 27
Q ss_pred EEEeccCcC-CCCcHHHHHhcCCCC-----C--hhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHH
Q 000463 711 AYVAQTSWI-QNGTIEENILFGLPM-----N--RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLAR 782 (1479)
Q Consensus 711 ayv~Q~~~i-~~~Tv~enI~fg~~~-----~--~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 782 (1479)
||++|++-+ ++.|++||+.++... . ....++ ..++-++.+... ........+||||||||++|||
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~-----~v~~~le~vgl~--~~~~~~~~~LSgGerQRv~IAr 152 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRA-----AVERAMERTGVA--QFADRPVTSLSGGERQRVLLAR 152 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHH-----HHHHHHHHcCCc--hhhcCChhhCCHHHHHHHHHHH
Confidence 999999876 678999999987521 1 111111 112223333222 1234567899999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000463 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 783 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
||+++|+++||||||++||+..+..+++.+.+...+|+|+|++||+++.+. .||++++|++|++++.|++++++..
T Consensus 153 AL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 153 ALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 999999999999999999999999998766655556899999999999986 5999999999999999999998753
No 383
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=353.12 Aligned_cols=210 Identities=28% Similarity=0.407 Sum_probs=172.4
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------E
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------T 710 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------i 710 (1479)
...++++|++++|+ +.++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. +
T Consensus 17 ~~~l~l~~v~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i 93 (377)
T PRK11607 17 TPLLEIRNLTKSFD---GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPI 93 (377)
T ss_pred CceEEEEeEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCE
Confidence 34699999999995 246999999999999999999999999999999999999999999999883 7
Q ss_pred EEEeccCcCC-CCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCC
Q 000463 711 AYVAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1479)
Q Consensus 711 ayv~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 789 (1479)
+||+|++-++ ..||+|||.|+.........+..+ ...+-++.+... .....++.+|||||||||+|||||+.+|+
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~--~v~~~l~~l~L~--~~~~~~~~~LSgGq~QRVaLARAL~~~P~ 169 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS--RVNEMLGLVHMQ--EFAKRKPHQLSGGQRQRVALARSLAKRPK 169 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCCc--hhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999998877 569999999975321101111111 122233333322 23456778999999999999999999999
Q ss_pred EEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000463 790 IYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 790 illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
++|||||||+||+..++.+.+.+.+... .|.|+|+||||.+++. .||+|++|++|++++.|+++++..+
T Consensus 170 lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 170 LLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 9999999999999999999876665544 4899999999999865 5999999999999999999998764
No 384
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=334.89 Aligned_cols=201 Identities=25% Similarity=0.360 Sum_probs=164.2
Q ss_pred cEEEEeeEEEecCCC-CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------
Q 000463 644 AVEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------- 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 708 (1479)
.++++|+++.|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 589999999996422 24799999999999999999999999999999999999999999999987
Q ss_pred ---eEEEEeccCcCCC-CcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHH
Q 000463 709 ---TTAYVAQTSWIQN-GTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1479)
Q Consensus 709 ---~iayv~Q~~~i~~-~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1479)
.++|++|++.++. .|++||+.++.. .+....++ ...+-++.+.. .....+++.+||||||||++||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gl--~~~~~~~~~~LSgG~~qrl~la 157 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS-----RALEMLAAVGL--EHRANHRPSELSGGERQRVAIA 157 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCC--chhhhCChhhCCHHHHHHHHHH
Confidence 2799999987765 599999987432 11111111 11222333322 2334567789999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccccCCEEEEEeCCEEEEecC
Q 000463 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREGMIVQSGR 851 (1479)
Q Consensus 782 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~ 851 (1479)
||++.+|+++||||||++||+.+.+.+.+.+.+... +|+|+|++||+++++..+|++++|++|++++.|+
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 158 RALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999876655444 5899999999999998889999999999998765
No 385
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.4e-35 Score=335.26 Aligned_cols=206 Identities=25% Similarity=0.362 Sum_probs=166.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------E
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------T 710 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------i 710 (1479)
++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|..+|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYG---KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeC---CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 46899999995 346999999999999999999999999999999999999999999998762 7
Q ss_pred EEEeccCcCCC-CcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCC
Q 000463 711 AYVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1479)
Q Consensus 711 ayv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 789 (1479)
+|++|++.++. .|++||+.++.+.......+..+ ...+-++.+. ......+.+.+||||||||++||||++.+|+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~~--l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 153 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREE--KLEELLEEFH--ITHLRKSKASSLSGGERRRVEIARALATNPK 153 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHcC--ChhhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 89999987765 59999998754321100111111 1122233332 2233456778999999999999999999999
Q ss_pred EEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 790 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
++||||||++||+.+.+.+++.+.+...+|+|+|++||+++.+.. ||++++|++|++++.|+.+++..
T Consensus 154 llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 154 FLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999987665554568999999999988765 89999999999999999887653
No 386
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=9.3e-36 Score=354.25 Aligned_cols=187 Identities=25% Similarity=0.333 Sum_probs=163.4
Q ss_pred CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCE----ecCCCChhhh---h-cceEEEcCccc
Q 000463 1282 PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI----DISLLGLHDL---R-SRFGIIPQEPV 1353 (1479)
Q Consensus 1282 ~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~----dI~~i~l~~L---R-~~i~iIpQdp~ 1353 (1479)
..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. |+...+.+.+ | +++++|||++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35899999999999999999999999999999999999999999999996 6777765554 3 57999999999
Q ss_pred ccc-ccHhhhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCE
Q 000463 1354 LFE-GTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRL 1425 (1479)
Q Consensus 1354 LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1425 (1479)
+|. .|+++|+... ...+ .+++.++++.++|.++....| .+||||||||++|||||+++|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 997 6999999631 1122 245788899999987655444 35899999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1426 LFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1426 LiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||||||+||+.+.+.+++.|++..+ ++|+|+|||+++.+.. ||||++|++|+
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~ 242 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGR 242 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999998754 7899999999999866 99999999995
No 387
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-35 Score=336.96 Aligned_cols=203 Identities=24% Similarity=0.339 Sum_probs=166.8
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc---cCCcEEEECCe-----------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH---KISGKVKVCGT----------- 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~---~~~G~i~~~g~----------- 709 (1479)
.|+++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|.
T Consensus 2 ~~~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYG---KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEEC---CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 478999999995 2479999999999999999999999999999999999974 69999999872
Q ss_pred --EEEEeccCcCCCCcHHHHHhcCCCCCh-----h----hHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHH
Q 000463 710 --TAYVAQTSWIQNGTIEENILFGLPMNR-----A----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRI 778 (1479)
Q Consensus 710 --iayv~Q~~~i~~~Tv~enI~fg~~~~~-----~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 778 (1479)
++|++|++.+++.|++||+.++..... . +..+.++..++.+.+. ....+++.+|||||||||
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVK-------DKLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhh-------HHhcCCcccCCHHHHHHH
Confidence 799999999988999999987632210 1 1112222222221111 124567789999999999
Q ss_pred HHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 779 QLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 779 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+||||++++|+++||||||++||+.+...+.+.+.+. .+++|+|++||+++.+.. ||++++|++|++++.|+.+++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~-~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKEL-SHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHH-hCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999887655444 458999999999998865 89999999999999999888764
No 388
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-35 Score=338.00 Aligned_cols=206 Identities=28% Similarity=0.367 Sum_probs=167.0
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC---------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG--------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g--------- 708 (1479)
..++++|+++.|++ +++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 47999999999952 4699999999999999999999999999999999999987 589999876
Q ss_pred ------eEEEEeccCcCCCCcHHHHHhcCCCC----ChhhHHHHHHHhchHHHHHhcccC--CccccccCCCccchHHHH
Q 000463 709 ------TTAYVAQTSWIQNGTIEENILFGLPM----NRAKYGEVVRVCCLEKDLEMMEYG--DQTEIGERGINLSGGQKQ 776 (1479)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~~----~~~~~~~v~~~~~l~~dl~~l~~g--d~t~ig~~g~~LSGGQkq 776 (1479)
.++|++|++.+++.|++|||.++... +....++.+ .+.++.+... .......++.+|||||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~l~~~~~~~~~~LSgG~~q 157 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIV-----EQSLKKSALWNEVKDKLNTNALSLSGGQQQ 157 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHH-----HHHHHHhCCchhhHHHHhCCcccCCHHHHH
Confidence 27999999998889999999986421 111111111 1111211110 011234578899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHH
Q 000463 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNAL 855 (1479)
Q Consensus 777 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 855 (1479)
||+||||++.+|+++||||||++||+.+.+.+++.+.+. .+++|+|++||+++++.. ||++++|++|++++.|+++++
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 158 RLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINL-KESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999998755554 457999999999999865 899999999999999999888
Q ss_pred Hh
Q 000463 856 LN 857 (1479)
Q Consensus 856 ~~ 857 (1479)
.+
T Consensus 237 ~~ 238 (254)
T PRK14273 237 FF 238 (254)
T ss_pred Hh
Confidence 64
No 389
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=337.82 Aligned_cols=209 Identities=30% Similarity=0.418 Sum_probs=167.7
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TTA 711 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ia 711 (1479)
++++|++++|++. +++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| .++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4688999999631 4699999999999999999999999999999999999999999999987 269
Q ss_pred EEeccCcCCC-CcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 712 YVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 712 yv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
|++|++.++. .|++||+.++..+......+ . .....+.++.+.........+++.+||||||||++||||++.+|++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~-~-~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~l 156 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEK-I-RERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPL 156 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHH-H-HHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999998774 79999998763221100011 0 1112233444432211134567889999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 157 lllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 157 LLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred EEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999888766655443 8999999999998764 89999999999999999887754
No 390
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=331.71 Aligned_cols=194 Identities=23% Similarity=0.373 Sum_probs=165.9
Q ss_pred EEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCC----Chhhhhcc
Q 000463 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLL----GLHDLRSR 1344 (1479)
Q Consensus 1269 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~~LR~~ 1344 (1479)
++ |++++|+.. .+ |+||+|++ |++||+|+||||||||+++|.|+++|++|+|.+||.++... +....|++
T Consensus 3 ~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 76 (214)
T cd03297 3 CV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRK 76 (214)
T ss_pred ee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhc
Confidence 44 899999753 24 99999999 99999999999999999999999999999999999998643 23457889
Q ss_pred eEEEcCccccccc-cHhhhcCCC-CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHH
Q 000463 1345 FGIIPQEPVLFEG-TVRSNIDPI-GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1479)
Q Consensus 1345 i~iIpQdp~LF~g-TIR~NLdp~-~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1418 (1479)
++++||++.+|.+ |+++|+... ..+ .++++.+++++.++.+.... ...+||||||||++||||
T Consensus 77 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~a 145 (214)
T cd03297 77 IGLVFQQYALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDHLLNR-----------YPAQLSGGEKQRVALARA 145 (214)
T ss_pred EEEEecCCccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHhHhhc-----------CcccCCHHHHHHHHHHHH
Confidence 9999999999864 999999632 111 23457778888877654433 335799999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1419 LLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
++++|+||||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|+
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 146 LAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 9999999999999999999999999999998643 7899999999999976 99999999995
No 391
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.5e-35 Score=349.31 Aligned_cols=211 Identities=24% Similarity=0.358 Sum_probs=170.7
Q ss_pred CccEEEEeeEEEecCCC----------CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---
Q 000463 642 NIAVEVRDGVFSWDDEN----------GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~----------~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--- 708 (1479)
+..++++|++++|+... ..++++|+||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 45799999999996421 24689999999999999999999999999999999999999999999877
Q ss_pred -------------eEEEEeccCc--C-CCCcHHHHHhcCCC-----CChhhHHHHHHHhchHHHHHhcccCCccccccCC
Q 000463 709 -------------TTAYVAQTSW--I-QNGTIEENILFGLP-----MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERG 767 (1479)
Q Consensus 709 -------------~iayv~Q~~~--i-~~~Tv~enI~fg~~-----~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g 767 (1479)
.++||+|+|. + +..||.|||.++.. .+++..++.. .+-++.+... .......+
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~-----~~~l~~vgl~-~~~~~~~p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRV-----KAMMLKVGLL-PNLINRYP 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCC-hHHhcCCc
Confidence 3799999983 4 46899999976421 2222111111 1122322221 11345678
Q ss_pred CccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCE
Q 000463 768 INLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGM 845 (1479)
Q Consensus 768 ~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~ 845 (1479)
.+|||||||||+||||++.+|+++|+||||++||+.++.++.+.+.+... .|.|+|+||||++.+.. ||+|++|++|+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ 239 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGH 239 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999876655544 38999999999999875 99999999999
Q ss_pred EEEecChHHHHhc
Q 000463 846 IVQSGRYNALLNS 858 (1479)
Q Consensus 846 i~~~g~~~~l~~~ 858 (1479)
|++.|+.+++.++
T Consensus 240 ive~g~~~~i~~~ 252 (331)
T PRK15079 240 AVELGTYDEVYHN 252 (331)
T ss_pred EEEEcCHHHHHcC
Confidence 9999999998764
No 392
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.4e-35 Score=330.76 Aligned_cols=193 Identities=35% Similarity=0.525 Sum_probs=155.1
Q ss_pred EEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------EEEEeccCc
Q 000463 647 VRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------TAYVAQTSW 718 (1479)
Q Consensus 647 ~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------iayv~Q~~~ 718 (1479)
++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|. ++|++|++.
T Consensus 2 ~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~ 78 (213)
T cd03235 2 VEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRS 78 (213)
T ss_pred cccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccc
Confidence 6789999952 46999999999999999999999999999999999999999999999883 899999986
Q ss_pred C---CCCcHHHHHhcCCCCC-------hhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCC
Q 000463 719 I---QNGTIEENILFGLPMN-------RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1479)
Q Consensus 719 i---~~~Tv~enI~fg~~~~-------~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 788 (1479)
+ ++.|++||+.++.... .+..++ ...+-++.+... ........+||||||||++||||++.+|
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~--~~~~~~~~~LSgG~~qrv~la~al~~~p 151 (213)
T cd03235 79 IDRDFPISVRDVVLMGLYGHKGLFRRLSKADKA-----KVDEALERVGLS--ELADRQIGELSGGQQQRVLLARALVQDP 151 (213)
T ss_pred cccCCCCcHHHHHHhccccccccccCCCHHHHH-----HHHHHHHHcCCH--HHHhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 5 4579999998864311 011110 111222222211 1234567899999999999999999999
Q ss_pred CEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEec
Q 000463 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1479)
Q Consensus 789 ~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1479)
+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++++.. ||++++|++| +++.|
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 152 DLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999987666554578999999999999865 8999999986 55443
No 393
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-35 Score=336.14 Aligned_cols=197 Identities=27% Similarity=0.342 Sum_probs=163.6
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------eEEEEe
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------TTAYVA 714 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------~iayv~ 714 (1479)
..|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .++|++
T Consensus 11 ~~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~ 87 (257)
T PRK11247 11 TPLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMF 87 (257)
T ss_pred CcEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEe
Confidence 46999999999952 4799999999999999999999999999999999999999999999877 389999
Q ss_pred ccCcCCC-CcHHHHHhcCCCCC-hhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEE
Q 000463 715 QTSWIQN-GTIEENILFGLPMN-RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYL 792 (1479)
Q Consensus 715 Q~~~i~~-~Tv~enI~fg~~~~-~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ill 792 (1479)
|++.++. .|++||+.++.... .++..+ -++.+.. ......++.+||||||||++||||++.+|+++|
T Consensus 88 q~~~l~~~~tv~enl~~~~~~~~~~~~~~---------~l~~~gl--~~~~~~~~~~LSgGqkqrl~laraL~~~p~lll 156 (257)
T PRK11247 88 QDARLLPWKKVIDNVGLGLKGQWRDAALQ---------ALAAVGL--ADRANEWPAALSGGQKQRVALARALIHRPGLLL 156 (257)
T ss_pred cCccCCCCCcHHHHHHhcccchHHHHHHH---------HHHHcCC--hhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9987765 79999999864211 111112 2222222 123456778999999999999999999999999
Q ss_pred EeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChH
Q 000463 793 LDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYN 853 (1479)
Q Consensus 793 LDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~ 853 (1479)
|||||++||+.+.+.+.+.+.+... .++|+|++||+++++.. ||+|++|++|++++.|+.+
T Consensus 157 LDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 157 LDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999876655433 48999999999999764 8999999999999887654
No 394
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.3e-35 Score=336.60 Aligned_cols=208 Identities=30% Similarity=0.407 Sum_probs=166.8
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccC-----CcEEEECC----------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKI-----SGKVKVCG---------- 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~-----~G~i~~~g---------- 708 (1479)
+++++|++++|++ .++++|+||++++||+++|+|+||||||||+++|+|..+|+ +|+|.++|
T Consensus 1 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~ 77 (247)
T TIGR00972 1 AIEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDV 77 (247)
T ss_pred CEEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccch
Confidence 4789999999953 46999999999999999999999999999999999999998 99999876
Q ss_pred -----eEEEEeccCcCCCCcHHHHHhcCCCCChh-hHHHHHHHhchHHHHHhcccCC--ccccccCCCccchHHHHHHHH
Q 000463 709 -----TTAYVAQTSWIQNGTIEENILFGLPMNRA-KYGEVVRVCCLEKDLEMMEYGD--QTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 709 -----~iayv~Q~~~i~~~Tv~enI~fg~~~~~~-~~~~v~~~~~l~~dl~~l~~gd--~t~ig~~g~~LSGGQkqRv~L 780 (1479)
.++|+||+++++..|++||+.++...... ..++..+. ..+-++.+.... .......+.+||||||||++|
T Consensus 78 ~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~--~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~l 155 (247)
T TIGR00972 78 VELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEI--VEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCI 155 (247)
T ss_pred HHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHH--HHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHH
Confidence 27899999998889999999876322110 00111111 112223332210 023456788999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|||++.+|+++||||||++||+.+.+.+++.+.+. .+++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 156 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~-~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 156 ARALAVEPEVLLLDEPTSALDPIATGKIEELIQEL-KKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-HhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999988655443 345899999999998865 89999999999999999888754
No 395
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.6e-35 Score=331.52 Aligned_cols=202 Identities=21% Similarity=0.318 Sum_probs=161.5
Q ss_pred EEEEeeEEEecCCCC-cccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eEE
Q 000463 645 VEVRDGVFSWDDENG-EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TTA 711 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~ia 711 (1479)
++++|++++|++... .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 688999999964211 2699999999999999999999999999999999999999999999987 379
Q ss_pred EEeccCcCCC-CcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 712 YVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 712 yv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
|++|++.++. .|++||+.+.........++..+ ...+.++.+. ......+++.+||||||||++||||++.+|++
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~--~~~~~l~~~~--l~~~~~~~~~~LS~G~~qrv~laral~~~p~i 157 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA--RLEELADRLG--MEELLDRRVGGFSTGMRQKVAIARALVHDPPV 157 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcC--CHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCE
Confidence 9999998776 59999997643211000111111 1122233332 22334567889999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEec
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1479)
+||||||++||+.+.+.+.+.+.+...+|+|+|++||+++++.. +|++++|++|++++.|
T Consensus 158 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 158 LLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred EEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 99999999999999999987665554568999999999998865 8999999999998654
No 396
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.9e-35 Score=333.38 Aligned_cols=204 Identities=28% Similarity=0.386 Sum_probs=160.4
Q ss_pred EEEEeeEEEecCCC-CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------
Q 000463 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------- 708 (1479)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 708 (1479)
++++|+++.|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68999999996321 12699999999999999999999999999999999999999999999876
Q ss_pred -eEEEEeccCc--C-CCCcHHHHHhcCCCCC-hhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHH
Q 000463 709 -TTAYVAQTSW--I-QNGTIEENILFGLPMN-RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1479)
Q Consensus 709 -~iayv~Q~~~--i-~~~Tv~enI~fg~~~~-~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 783 (1479)
.++|++|++. + .+.|++||+.++.... .....+..+.. ..+.++.+... ......++.+||||||||++||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~-~~~~l~~~~l~-~~~~~~~~~~LS~G~~qrv~lara 159 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEA-VLLLLVGVGLP-EEVLNRYPHELSGGQRQRVAIARA 159 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHH-HHHHHHHCCCC-hhHhhCCchhcCHHHHHHHHHHHH
Confidence 3799999983 3 4689999998653211 01111111110 01233333221 123567788999999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccc-cCCEEEEEeCCEEEEec
Q 000463 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSG 850 (1479)
Q Consensus 784 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g 850 (1479)
++.+|+++||||||++||+.+.+.+++.+.+...+ |+|+|++||+++.+. .||++++|++|++++.|
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 160 LALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999998766555444 899999999999987 59999999999998654
No 397
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=341.68 Aligned_cols=206 Identities=27% Similarity=0.431 Sum_probs=168.8
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1479)
..++++|+++.|+. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 4 ~~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~ 81 (283)
T PRK13636 4 YILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLR 81 (283)
T ss_pred ceEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHH
Confidence 36899999999952 346999999999999999999999999999999999999999999999872
Q ss_pred --EEEEeccC--cCCCCcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHH
Q 000463 710 --TAYVAQTS--WIQNGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLAR 782 (1479)
Q Consensus 710 --iayv~Q~~--~i~~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 782 (1479)
++|++|++ .+++.|++||+.++... ......+. ..+-++.+.. ......++.+||||||||++|||
T Consensus 82 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL--~~~~~~~~~~LS~G~~qrl~lar 154 (283)
T PRK13636 82 ESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRTGI--EHLKDKPTHCLSFGQKKRVAIAG 154 (283)
T ss_pred hhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHCCC--hhhhhCCcccCCHHHHHHHHHHH
Confidence 69999998 56788999999875321 11111110 1112222221 12234678899999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000463 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 783 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
||+.+|+++||||||++||+.+.+.+++.+.+...+ |+|+|++||+++++. .||++++|++|++++.|+++++.+
T Consensus 155 aL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 155 VLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999998766555444 899999999999987 599999999999999999988765
No 398
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2e-35 Score=329.58 Aligned_cols=196 Identities=30% Similarity=0.454 Sum_probs=160.8
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------eEEEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------TTAYV 713 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~iayv 713 (1479)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++|+
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~ 77 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMV 77 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEE
Confidence 468999999953 4799999999999999999999999999999999999999999999987 37999
Q ss_pred eccCcCC-CCcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCC
Q 000463 714 AQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1479)
Q Consensus 714 ~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 789 (1479)
+|++.++ +.|++||+.++... ..+..++. ..+.++.+. ..........+||||||||++||||++.+|+
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~--l~~~~~~~~~~LS~G~~qr~~laral~~~p~ 150 (213)
T cd03301 78 FQNYALYPHMTVYDNIAFGLKLRKVPKDEIDER-----VREVAELLQ--IEHLLDRKPKQLSGGQRQRVALGRAIVREPK 150 (213)
T ss_pred ecChhhccCCCHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcC--CHHHHhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999877 46999999876321 11111111 112233332 2223456778999999999999999999999
Q ss_pred EEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEEec
Q 000463 790 IYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1479)
Q Consensus 790 illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1479)
++||||||++||+++.+.+++.+.+... .|+|+|++||+++++.. ||++++|++|++++.|
T Consensus 151 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 151 VFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999876665544 48999999999998875 8999999999998765
No 399
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=334.58 Aligned_cols=209 Identities=29% Similarity=0.421 Sum_probs=168.0
Q ss_pred EEEEeeEEEecCCC-CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000463 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1479)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1479)
|+++|++++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999996321 127999999999999999999999999999999999999999999998762
Q ss_pred --EEEEeccCcCCC-CcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhc
Q 000463 710 --TAYVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQ 786 (1479)
Q Consensus 710 --iayv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~ 786 (1479)
++|++|++.++. .|++||+.++.........+.. ....+.++.+.. .........+||||||||++||||++.
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~--~~~~~~l~~~~l--~~~~~~~~~~LS~G~~qrv~la~al~~ 157 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIE--ERVLELLELVGL--EDKADAYPAQLSGGQKQRVGIARALAN 157 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHH--HHHHHHHHHCCC--hhhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 799999998875 7999999875321100011111 112233343322 223456778999999999999999999
Q ss_pred CCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 787 DCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 787 ~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+|+++||||||++||+.+.+.+++.+.+...+ |+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 158 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 158 NPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred CCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999998766555444 8999999999999865 89999999999999998877653
No 400
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=1.2e-35 Score=322.02 Aligned_cols=172 Identities=31% Similarity=0.541 Sum_probs=157.7
Q ss_pred EEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEE
Q 000463 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGII 1348 (1479)
Q Consensus 1269 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iI 1348 (1479)
+++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++++
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 47899999964 4599999999999999999999999999999999999999999999999999988888889999999
Q ss_pred cCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEE
Q 000463 1349 PQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFM 1428 (1479)
Q Consensus 1349 pQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiL 1428 (1479)
|| +++.+++.++.... ..+||+|||||++||||++++|+++||
T Consensus 79 ~q--------------------------~l~~~gl~~~~~~~-----------~~~LS~G~~qrl~laral~~~p~llll 121 (180)
T cd03214 79 PQ--------------------------ALELLGLAHLADRP-----------FNELSGGERQRVLLARALAQEPPILLL 121 (180)
T ss_pred HH--------------------------HHHHcCCHhHhcCC-----------cccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99 78888888765433 347999999999999999999999999
Q ss_pred eCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1429 DEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1429 DEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||++||.++.+.+.+.|++..+ ++|+|+++|+++.+.+ ||++++|++|+
T Consensus 122 DEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~ 175 (180)
T cd03214 122 DEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGR 175 (180)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999998754 7899999999999866 99999999985
No 401
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=342.02 Aligned_cols=203 Identities=32% Similarity=0.435 Sum_probs=163.2
Q ss_pred EEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------------
Q 000463 646 EVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----------------- 708 (1479)
Q Consensus 646 ~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------------- 708 (1479)
.++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 3456677764 34689999999999999999999999999999999999999999999876
Q ss_pred eEEEEeccCcCC-CCcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 709 TTAYVAQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 709 ~iayv~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
.++|++|++.++ +.|++||+.++... +.....+ ...+.++.+.. ...+.....+||||||||++||||+
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l--~~~~~~~~~~LS~Gq~qrv~lAral 175 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREE-----RAAEALELVGL--EGWEHKYPDELSGGMQQRVGLARAL 175 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCC--HhHhhCCcccCCHHHHHHHHHHHHH
Confidence 379999999877 57999999875321 1111111 11122333322 1234566779999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
+.+|+++||||||++||+.+.+.+.+.+.+... .|+|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 176 ~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 176 AVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999876655443 38999999999998765 899999999999999999888653
No 402
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=352.12 Aligned_cols=196 Identities=25% Similarity=0.412 Sum_probs=172.1
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCC----Chhhhhc
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLL----GLHDLRS 1343 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~~LR~ 1343 (1479)
+++ |++++|.. . .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... .....|+
T Consensus 2 l~~-~l~k~~~~--~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGD--L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCC--E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 566 89999964 2 23 99999999999999999999999999999999999999999999998753 2445688
Q ss_pred ceEEEcCcccccc-ccHhhhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhcc
Q 000463 1344 RFGIIPQEPVLFE-GTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1479)
Q Consensus 1344 ~i~iIpQdp~LF~-gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1421 (1479)
+++++||++.+|. .|+++|+... ....++++.++++..++.+.....| .+||||||||++|||||++
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRYP-----------GSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCCc-----------ccCCHHHHHHHHHHHHHHc
Confidence 9999999999996 4999999742 2345678899999999877666554 3689999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1422 ~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|+
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999998754 6899999999999877 99999999995
No 403
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.5e-35 Score=348.31 Aligned_cols=209 Identities=27% Similarity=0.396 Sum_probs=169.8
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------ 709 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------ 709 (1479)
...|+++|++++|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 39 ~~~i~i~nl~k~y~---~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ 115 (340)
T PRK13536 39 TVAIDLAGVSKSYG---DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARAR 115 (340)
T ss_pred ceeEEEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhcc
Confidence 35799999999995 346999999999999999999999999999999999999999999999873
Q ss_pred EEEEeccCcCC-CCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCC
Q 000463 710 TAYVAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1479)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 788 (1479)
+||+||++.++ ..|++||+.+..........+..+. ..+-++.+...+ ....+..+||||||||++|||||+++|
T Consensus 116 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~--~~~ll~~~~L~~--~~~~~~~~LS~G~kqrv~lA~aL~~~P 191 (340)
T PRK13536 116 IGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAV--IPSLLEFARLES--KADARVSDLSGGMKRRLTLARALINDP 191 (340)
T ss_pred EEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHH--HHHHHHHcCCch--hhCCChhhCCHHHHHHHHHHHHHhcCC
Confidence 79999998875 6799999975321110000111111 111122222221 234567799999999999999999999
Q ss_pred CEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 789 ~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+++||||||++||+.+++.+++.+.+...+|+|+|++||+++++.. ||+|++|++|+++..|+++++.+
T Consensus 192 ~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 192 QLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999987766655569999999999999875 99999999999999999998865
No 404
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.4e-35 Score=330.62 Aligned_cols=202 Identities=25% Similarity=0.411 Sum_probs=162.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------EEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------TAY 712 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------iay 712 (1479)
++++|+++.|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEE
Confidence 4688999999532 257999999999999999999999999999999999999999999999873 799
Q ss_pred EeccCcCC-CCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCC
Q 000463 713 VAQTSWIQ-NGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1479)
Q Consensus 713 v~Q~~~i~-~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 788 (1479)
++|++.++ +.|++||+.++.. .......+ + ..+-++.+... ........+||||||||++||||++.+|
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~--~---~~~~l~~~~l~--~~~~~~~~~LS~G~~qrv~la~al~~~p 152 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKE--E---VELLLRVLGLT--DKANKRARTLSGGMKRKLSLAIALIGGP 152 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHH--H---HHHHHHHcCCH--HHHhChhhhCCHHHHHHHHHHHHHhcCC
Confidence 99998776 6799999987532 11111111 0 11122222211 1234566799999999999999999999
Q ss_pred CEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHH
Q 000463 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNAL 855 (1479)
Q Consensus 789 ~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 855 (1479)
+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 ~llllDEP~~~LD~~~~~~l~~~l~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 153 SVLLLDEPTSGLDPASRRAIWDLILEV-RKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHH-hcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 999999999999999999988655443 446999999999999875 899999999999999987764
No 405
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=1.8e-35 Score=326.20 Aligned_cols=175 Identities=25% Similarity=0.333 Sum_probs=155.6
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcc--CCCCccEEEEcCEecCCCChhhh-hcc
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRL--VEPSGGRIIIDGIDISLLGLHDL-RSR 1344 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl--~~p~~G~I~IDG~dI~~i~l~~L-R~~ 1344 (1479)
++++|++++|+. .++|+|+||++++||.+||+|+||||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999973 3599999999999999999999999999999999999 58999999999999998876654 556
Q ss_pred eEEEcCccccccc-cHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCC
Q 000463 1345 FGIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1479)
Q Consensus 1345 i~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1423 (1479)
++++||+|.+|.+ |+++|++ . ...+||+|||||++||||++++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l~------------------------~-----------~~~~LS~G~~qrv~laral~~~p 123 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFLR------------------------Y-----------VNEGFSGGEKKRNEILQLLLLEP 123 (200)
T ss_pred EEEeecChhhccCccHHHHHh------------------------h-----------ccccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999876 5665550 0 11369999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHcC-CcEEEEEccChhhhh--hcCEEEEEeCCC
Q 000463 1424 RLLFMDEATASVDSQTDAEIQRIIREEFA-ACTIISIAHRIPTVM--DCDRVIVVDAGL 1479 (1479)
Q Consensus 1424 ~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~-~~TvI~IAHRl~ti~--~~DrIlVL~~G~ 1479 (1479)
+||+|||||++||..+.+.+.+.|++..+ ++|+|++||+++.+. .||+|++|++|+
T Consensus 124 ~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~ 182 (200)
T cd03217 124 DLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGR 182 (200)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCE
Confidence 99999999999999999999999998653 789999999999998 599999999985
No 406
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-35 Score=340.78 Aligned_cols=208 Identities=28% Similarity=0.403 Sum_probs=169.9
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCC---cEEEECC----------
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKIS---GKVKVCG---------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~---G~i~~~g---------- 708 (1479)
+..++++|+++.|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|
T Consensus 3 ~~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~ 81 (282)
T PRK13640 3 DNIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWD 81 (282)
T ss_pred CceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHH
Confidence 3579999999999632 2469999999999999999999999999999999999999998 8999887
Q ss_pred ---eEEEEeccCc--CCCCcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHH
Q 000463 709 ---TTAYVAQTSW--IQNGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 709 ---~iayv~Q~~~--i~~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1479)
.++|++|+|. +++.|++|||.|+... +.+...+.+ .+-++.+.. .........+|||||||||+|
T Consensus 82 ~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~l~~~~L--~~~~~~~~~~LS~G~~qrv~l 154 (282)
T PRK13640 82 IREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIV-----RDVLADVGM--LDYIDSEPANLSGGQKQRVAI 154 (282)
T ss_pred HHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHH-----HHHHHHCCC--hhHhcCCcccCCHHHHHHHHH
Confidence 2799999984 6688999999986432 111111111 111222221 123456778999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHh
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|||++.+|+++||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++++..||++++|++|++++.|+++++..
T Consensus 155 aral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 155 AGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999998766554443 899999999999987799999999999999999988764
No 407
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.6e-35 Score=338.19 Aligned_cols=201 Identities=25% Similarity=0.419 Sum_probs=167.3
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEe-----cCCCChhh-
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGID-----ISLLGLHD- 1340 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~d-----I~~i~l~~- 1340 (1479)
-++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5899999999964 359999999999999999999999999999999999999999999999999 87776554
Q ss_pred ---hhcceEEEcCccc--ccc-ccHhhhcCC----CCCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCC
Q 000463 1341 ---LRSRFGIIPQEPV--LFE-GTVRSNIDP----IGQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWS 1406 (1479)
Q Consensus 1341 ---LR~~i~iIpQdp~--LF~-gTIR~NLdp----~~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1406 (1479)
.|+.++++||+|. ++. .|+++|+.. +.... ++++.++++..++.+ +.....+.+||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS 153 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDA----------ARIDDLPTTFS 153 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCCh----------hHHhCCCccCC
Confidence 3567999999984 333 478888741 22111 234455566655532 12334556899
Q ss_pred chHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1407 gGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||||++|||||+++|+||||||||++||+++.+.+.+.|++..+ +.|||+|||+++.+.+ ||+|++|++|+
T Consensus 154 ~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~ 229 (258)
T PRK11701 154 GGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGR 229 (258)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 9999999999999999999999999999999999999999988653 7899999999999986 99999999985
No 408
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.1e-35 Score=318.44 Aligned_cols=166 Identities=33% Similarity=0.587 Sum_probs=151.3
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------EEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------TAY 712 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------iay 712 (1479)
++++|++++|+.. .+++++|+||++++||+++|+|+||||||||+++|+|+.+|++|+|.++|. ++|
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEE
Confidence 4689999999642 236999999999999999999999999999999999999999999999883 799
Q ss_pred EeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEE
Q 000463 713 VAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYL 792 (1479)
Q Consensus 713 v~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ill 792 (1479)
++|++++++.|++||+ +.+||||||||++||||++.+|+++|
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999889999998 56899999999999999999999999
Q ss_pred EeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEEEEec
Q 000463 793 LDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSG 850 (1479)
Q Consensus 793 LDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g 850 (1479)
|||||++||+++.+.+++.+.+. .+++|+|++||++++++.||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~-~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEV-LKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHH-cCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999998766544 4689999999999999889999999999998754
No 409
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2e-35 Score=342.48 Aligned_cols=208 Identities=27% Similarity=0.440 Sum_probs=170.4
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eEE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TTA 711 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~ia 711 (1479)
.++++|+++.|.. ++.+|+||||++++|+++|++||||||||||+++|+|.++|++|+|.++| ++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheE
Confidence 5788999999952 35799999999999999999999999999999999999999999999998 389
Q ss_pred EEeccCcC-CCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 712 YVAQTSWI-QNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 712 yv~Q~~~i-~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
|+||+|-+ .+.|++||+.|-.......... .....++-++.+...+.. ..+..+||+|||||++||+||..+|++
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~--~~~~~~~~l~~~~L~~~~--~~~~~~lS~G~kqrl~ia~aL~~~P~l 157 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEE--AEERIEELLELFGLEDKA--NKKVRTLSGGMKQRLSIALALLHDPEL 157 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhH--HHHHHHHHHHHcCCchhh--CcchhhcCHHHHHHHHHHHHHhcCCCE
Confidence 99999875 4679999998743221110000 000112233333333311 466789999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhcCC-cEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGALKG-KTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~~~-~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|+|||||++|||..+..+++.+.+...+| +||+++||.++.+.. ||+|++|++|+++..|+.+++..
T Consensus 158 liLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~ 226 (293)
T COG1131 158 LILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKE 226 (293)
T ss_pred EEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHH
Confidence 99999999999999999998777766666 899999999999876 99999999999999999888654
No 410
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-36 Score=310.09 Aligned_cols=206 Identities=25% Similarity=0.358 Sum_probs=166.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eEEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TTAY 712 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~iay 712 (1479)
+++++++++|++ ...+++||||++++||+++|.|+|||||||+|++|.+++.|++|.|.++| ++|.
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhcce
Confidence 678999999964 34589999999999999999999999999999999999999999999987 4677
Q ss_pred EeccCcC-CCCcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 713 VAQTSWI-QNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 713 v~Q~~~i-~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
++-+.-+ ...|+||||.|-.. ++-.+-+-..+...+.+.+++. ..+..+..++|-|+||||+|||||.+||++
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~-----~~~~rRv~~~S~G~kqkV~iARAlvh~P~i 154 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLL-----EYLDRRVGEFSTGMKQKVAIARALVHDPSI 154 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChH-----HHHHHHHhhhchhhHHHHHHHHHHhcCCCe
Confidence 7755444 46799999986432 2111111111122233333322 234567889999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|+||||+|+||..+.+.+.+.+.+....|++||+.||.+++++. ||+|+++++|+++..|+.+++..
T Consensus 155 ~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 155 LVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred EEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHH
Confidence 99999999999999888876655555669999999999999985 99999999999999999988764
No 411
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.4e-35 Score=329.64 Aligned_cols=196 Identities=28% Similarity=0.404 Sum_probs=159.1
Q ss_pred EEEEeeEEEecCCC-CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------
Q 000463 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------- 708 (1479)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 708 (1479)
++++|++++|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68899999996322 24699999999999999999999999999999999999999999999876
Q ss_pred --eEEEEeccCcCC-CCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHH
Q 000463 709 --TTAYVAQTSWIQ-NGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLAR 782 (1479)
Q Consensus 709 --~iayv~Q~~~i~-~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 782 (1479)
.++|++|++.++ +.|++||+.++.. .+.....+ + ..+.++.+.. .......+.+|||||||||+|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~--~---~~~~l~~~~l--~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKE--R---AYEMLEKVGL--EHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHH--H---HHHHHHHcCC--hhhhhCChhhCCHHHHHHHHHHH
Confidence 279999998776 5699999987532 11111111 1 1122333322 22345677899999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccccCCEEEEEeCCEEE
Q 000463 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREGMIV 847 (1479)
Q Consensus 783 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~~D~i~~l~~G~i~ 847 (1479)
|++.+|+++||||||++||+++.+.+.+.+.+... .|+|+|++||+++++..+|++++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999876655444 489999999999998889999999999985
No 412
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-35 Score=340.53 Aligned_cols=208 Identities=24% Similarity=0.419 Sum_probs=168.0
Q ss_pred cEEEEeeEEEecCCC--CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------
Q 000463 644 AVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------ 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------ 709 (1479)
.++++|++++|++.. .+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 378999999996422 146999999999999999999999999999999999999999999998772
Q ss_pred -----EEEEeccC--cCCCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHH
Q 000463 710 -----TAYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 779 (1479)
Q Consensus 710 -----iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 779 (1479)
++|++|++ .+++.|++||+.++.. .+.+..++. ..+-++.+.... .....++.+||||||||++
T Consensus 82 ~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~-~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALVGISE-SLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCCh-hhhhCCcccCCHHHHHHHH
Confidence 69999997 5677899999987532 111111111 112222222210 1235677899999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 780 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
||||++.+|+++||||||++||+.+++.+.+.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+++++.+
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999987665554458999999999998865 89999999999999999888754
No 413
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.8e-35 Score=325.90 Aligned_cols=194 Identities=20% Similarity=0.357 Sum_probs=169.6
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 689999999964 35999999999999999999999999999999999999999999999999987654 456788999
Q ss_pred EcCcccccc-ccHhhhcCCCC----CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccC
Q 000463 1348 IPQEPVLFE-GTVRSNIDPIG----QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKH 1422 (1479)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp~~----~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~ 1422 (1479)
+||++.++. .|+++|+.... ...++++.++++..++.++.... ...||+|||||++||||++++
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qrl~la~al~~~ 147 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGFEDVP-----------VRQLSAGQQRRVALARLWLTR 147 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHHhhCC-----------hhhcCHHHHHHHHHHHHHhcC
Confidence 999998876 59999996321 13457788899999997654332 246999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEE
Q 000463 1423 SRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVV 1475 (1479)
Q Consensus 1423 ~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL 1475 (1479)
|+||+|||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. .+|++++
T Consensus 148 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 148 APLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999999999864 47899999999999965 5788887
No 414
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-35 Score=338.17 Aligned_cols=207 Identities=29% Similarity=0.465 Sum_probs=169.5
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------e
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------T 709 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ 709 (1479)
..++++|+++.|++ +++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 6 ~~l~~~nl~~~~~~-~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 84 (271)
T PRK13632 6 VMIKVENVSFSYPN-SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKK 84 (271)
T ss_pred eEEEEEeEEEEcCC-CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcc
Confidence 47899999999953 235799999999999999999999999999999999999999999999887 2
Q ss_pred EEEEeccC--cCCCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 710 TAYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 710 iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
++|++|+| .+++.|++||+.++.. ++.+..++ ...+-++.+.. ......++.+||||||||++||||+
T Consensus 85 i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l--~~~~~~~~~~LS~G~~qrl~laral 157 (271)
T PRK13632 85 IGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKVGM--EDYLDKEPQNLSGGQKQRVAIASVL 157 (271)
T ss_pred eEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCC--HHHhhCCcccCCHHHHHHHHHHHHH
Confidence 79999998 4567899999988632 22221111 11122232221 1234567789999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHh
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+.+|+++||||||++||+.+.+.+++.+.+...+ ++|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 158 ~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 158 ALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999998766655444 599999999999887899999999999999999887754
No 415
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.2e-35 Score=333.01 Aligned_cols=203 Identities=28% Similarity=0.417 Sum_probs=167.3
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------e
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------------T 709 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------~ 709 (1479)
++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~---~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFG---PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEEC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 68899999995 24699999999999999999999999999999999999999999999887 2
Q ss_pred EEEEeccCcCC-CCcHHHHHhcCCC----CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 710 TAYVAQTSWIQ-NGTIEENILFGLP----MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~----~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
++|++|++.++ ..|++||+.++.. .+.....+ ...+.++.+ |.......++.+||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 79999998776 4799999988631 11111111 112223333 222334567789999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+.+|++++|||||++||+++.+.+.+.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+++++.+
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIK 225 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhc
Confidence 99999999999999999999999987655544468999999999999875 89999999999999999888754
No 416
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=8.9e-35 Score=376.31 Aligned_cols=94 Identities=26% Similarity=0.399 Sum_probs=85.2
Q ss_pred cccCCCccchHHHHHHHHHHHHhcCC--CEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEE
Q 000463 763 IGERGINLSGGQKQRIQLARAVYQDC--DIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILV 840 (1479)
Q Consensus 763 ig~~g~~LSGGQkqRv~LARAl~~~~--~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~ 840 (1479)
.+....+|||||||||+|||||.++| ++|||||||++||++..+.+++.+.+...+|+|||+|+|+++++..||+|++
T Consensus 483 l~r~~~~LSgGE~QRv~LA~aL~~~~~~~llILDEPtagLd~~~~~~L~~~L~~L~~~G~TVIvVeH~~~~i~~aD~vi~ 562 (943)
T PRK00349 483 LSRSAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNDRLIETLKHLRDLGNTLIVVEHDEDTIRAADYIVD 562 (943)
T ss_pred CCCchhhCCHHHHHHHHHHHHHhhCCCCcEEEecCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEE
Confidence 46778899999999999999999997 9999999999999999999998766665679999999999999988999999
Q ss_pred E------eCCEEEEecChHHHH
Q 000463 841 M------REGMIVQSGRYNALL 856 (1479)
Q Consensus 841 l------~~G~i~~~g~~~~l~ 856 (1479)
| ++|+|+.+|+++++.
T Consensus 563 LgpgaG~~~G~iv~~g~~~e~~ 584 (943)
T PRK00349 563 IGPGAGVHGGEVVASGTPEEIM 584 (943)
T ss_pred eccccCCCCCEEeeccCHHHHh
Confidence 9 899999998877653
No 417
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-35 Score=336.35 Aligned_cols=206 Identities=29% Similarity=0.401 Sum_probs=167.8
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC---------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG--------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g--------- 708 (1479)
..++++|+++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 12 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 12 SKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred ceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 56899999999952 469999999999999999999999999999999999986 5899998876
Q ss_pred ------eEEEEeccCcCCCCcHHHHHhcCCCC----ChhhHHHHHHHhchHHHHHhcccC--CccccccCCCccchHHHH
Q 000463 709 ------TTAYVAQTSWIQNGTIEENILFGLPM----NRAKYGEVVRVCCLEKDLEMMEYG--DQTEIGERGINLSGGQKQ 776 (1479)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~~----~~~~~~~v~~~~~l~~dl~~l~~g--d~t~ig~~g~~LSGGQkq 776 (1479)
.++|++|++.++..|++||+.++... +.+..++. ..+-++.+... .....++++.+|||||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~q 163 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDER-----VEWALTKAALWNEVKDKLHQSGYSLSGGQQQ 163 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHH-----HHHHHHHcCCChhhHHHHhcCCCCCCHHHHH
Confidence 37899999988889999999886421 11111111 11112222111 113356778899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHH
Q 000463 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNAL 855 (1479)
Q Consensus 777 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 855 (1479)
|++||||++.+|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++.+.. ||++++|++|++++.|+.+++
T Consensus 164 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 242 (260)
T PRK10744 164 RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITEL-KQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTI 242 (260)
T ss_pred HHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHH-hcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999988765544 457899999999999865 899999999999999998887
Q ss_pred Hh
Q 000463 856 LN 857 (1479)
Q Consensus 856 ~~ 857 (1479)
.+
T Consensus 243 ~~ 244 (260)
T PRK10744 243 FT 244 (260)
T ss_pred Hh
Confidence 64
No 418
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-35 Score=338.89 Aligned_cols=211 Identities=28% Similarity=0.411 Sum_probs=169.1
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------E
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------T 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------i 710 (1479)
.++++|++++|++....++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 589999999996433346999999999999999999999999999999999999999999999872 7
Q ss_pred EEEeccCc--CCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCC
Q 000463 711 AYVAQTSW--IQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1479)
Q Consensus 711 ayv~Q~~~--i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 788 (1479)
+|++|+|. ++..|+.|||.++........++..+. ...-++.+.. .......+.+||||||||++||||++.+|
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~--~~~~l~~~~l--~~~~~~~~~~LS~G~~qrv~lAraL~~~p 159 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKR--VDEALLAVNM--LDFKTREPARLSGGQKQRVAVAGIIALRP 159 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHH--HHHHHHHCCC--HhHhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999983 677899999987632110001111110 1111222211 11234567899999999999999999999
Q ss_pred CEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhc
Q 000463 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 789 ~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
+++||||||++||+.+++.+.+.+.+...+ |+|+|++||+++++..||+|++|++|++++.|+++++...
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 160 EIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999998766555444 8999999999999888999999999999999999888653
No 419
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3e-35 Score=339.42 Aligned_cols=206 Identities=25% Similarity=0.322 Sum_probs=168.7
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 708 (1479)
..|+++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (269)
T PRK11831 6 NLVDMRGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTV 82 (269)
T ss_pred ceEEEeCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHH
Confidence 4689999999995 35799999999999999999999999999999999999999999999886
Q ss_pred --eEEEEeccCcCCC-CcHHHHHhcCCC----CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHH
Q 000463 709 --TTAYVAQTSWIQN-GTIEENILFGLP----MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1479)
Q Consensus 709 --~iayv~Q~~~i~~-~Tv~enI~fg~~----~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1479)
.++|++|++.++. .|++||+.++.. .+....+ ....+-++.+... .....+..+|||||||||+||
T Consensus 83 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~--~~~~~~~~~LSgGq~qrv~la 155 (269)
T PRK11831 83 RKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLH-----STVMMKLEAVGLR--GAAKLMPSELSGGMARRAALA 155 (269)
T ss_pred hhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHHcCCh--hhhhCChhhCCHHHHHHHHHH
Confidence 2789999998876 599999987521 1111100 0112223333222 223456789999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 782 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
||++.+|+++||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++++.. ||++++|++|++++.|+++++.+.
T Consensus 156 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (269)
T PRK11831 156 RAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQAN 234 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999988766554444 8999999999998875 899999999999999999988753
No 420
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-35 Score=342.38 Aligned_cols=212 Identities=25% Similarity=0.364 Sum_probs=167.4
Q ss_pred ccEEEEeeEEEecCCC--CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------
Q 000463 643 IAVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------ 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------ 708 (1479)
..|+++|++++|++.. ..++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 4589999999996432 13599999999999999999999999999999999999999999998866
Q ss_pred ------eEEEEeccCc--CCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHH
Q 000463 709 ------TTAYVAQTSW--IQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 709 ------~iayv~Q~~~--i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1479)
.++|++|+|. +++.|++||+.|+........++..+. ..+-++.+... ....+..+.+||||||||++|
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~--~~~ll~~~~L~-~~~~~~~~~~LS~Gq~qrv~l 161 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK--VPELLKLVQLP-EDYVKRSPFELSGGQKRRVAL 161 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH--HHHHHHHcCCC-hhHhcCChhhCCHHHHHHHHH
Confidence 2699999984 566799999998642111011111111 11222222210 112356778999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|||++.+|+++||||||++||+.+++.+++.+.+... .|+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 162 aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 240 (289)
T PRK13645 162 AGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEIFS 240 (289)
T ss_pred HHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999998876555444 38999999999998764 89999999999999999888754
No 421
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-35 Score=324.46 Aligned_cols=176 Identities=24% Similarity=0.381 Sum_probs=155.3
Q ss_pred cEEEEeeeeeecCC--CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccC--CCCccEEEEcCEecCCCChhhhh
Q 000463 1267 NVDLIDLQVRYRSN--TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLV--EPSGGRIIIDGIDISLLGLHDLR 1342 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--~p~~G~I~IDG~dI~~i~l~~LR 1342 (1479)
.|+++|++++|+.+ .+++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 58999999999752 246999999999999999999999999999999999986 489999999999986 5678
Q ss_pred cceEEEcCccccccc-cHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhcc
Q 000463 1343 SRFGIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1479)
Q Consensus 1343 ~~i~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1421 (1479)
++++++||+|.+|.+ |+++|+... ..++ +||||||||++||||+++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~---------~~~~------------------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFS---------ALLR------------------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHH---------HHHh------------------------cCCHHHhHHHHHHHHHhc
Confidence 899999999988875 999998521 0000 699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhh-h-hhcCEEEEEeC-CC
Q 000463 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPT-V-MDCDRVIVVDA-GL 1479 (1479)
Q Consensus 1422 ~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~t-i-~~~DrIlVL~~-G~ 1479 (1479)
+|++|+|||||+++|.++...+.+.|++.. +++|+|+|+|+++. + ..||||++|++ |+
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~ 187 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGK 187 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCe
Confidence 999999999999999999999999999864 47899999999984 4 55999999998 75
No 422
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-35 Score=326.99 Aligned_cols=199 Identities=26% Similarity=0.382 Sum_probs=160.3
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------eEEEEec
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------TTAYVAQ 715 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------~iayv~Q 715 (1479)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|..+|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q 77 (210)
T cd03269 1 LEVENVTKRFG---RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPE 77 (210)
T ss_pred CEEEEEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEecc
Confidence 46899999995 34799999999999999999999999999999999999999999999987 3899999
Q ss_pred cCcCCC-CcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEe
Q 000463 716 TSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLD 794 (1479)
Q Consensus 716 ~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLD 794 (1479)
++.++. .|++||+.++.........+.. ....+-++.+. .......+..+||||||||++||||++.+|+++|||
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~--~~~~~~l~~~~--l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~lllD 153 (210)
T cd03269 78 ERGLYPKMKVIDQLVYLAQLKGLKKEEAR--RRIDEWLERLE--LSEYANKRVEELSKGNQQKVQFIAAVIHDPELLILD 153 (210)
T ss_pred CCcCCcCCcHHHHHHHHHHHcCCChHHHH--HHHHHHHHHcC--ChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 987765 6999999875321100000000 11122233332 223345677899999999999999999999999999
Q ss_pred CccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEec
Q 000463 795 DVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1479)
Q Consensus 795 ep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1479)
|||++||+.+.+.+.+.+.+...+|+|+|++||+++.+.. ||++++|++|++++.|
T Consensus 154 EP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 154 EPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 9999999999999987665554568999999999999865 8999999999998654
No 423
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=5.3e-35 Score=333.17 Aligned_cols=187 Identities=29% Similarity=0.460 Sum_probs=166.0
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
-++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +.+++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 4899999999974 3599999999999999999999999999999999999999999999987 35799
Q ss_pred EEcCcccccc---ccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCC
Q 000463 1347 IIPQEPVLFE---GTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1479)
Q Consensus 1347 iIpQdp~LF~---gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1423 (1479)
++||+|.++. .|+++|+......+++++.++++.+++.+.....+ ..||+|||||++||||++++|
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qrv~laral~~~p 139 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHLIDAPM-----------QKLSGGETQRVLLARALLNRP 139 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHHHhCCh-----------hhCCHHHHHHHHHHHHHhcCC
Confidence 9999998765 38999975433456788999999999987665432 468999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeC
Q 000463 1424 RLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDA 1477 (1479)
Q Consensus 1424 ~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~ 1477 (1479)
++|+|||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++
T Consensus 140 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~ 196 (251)
T PRK09544 140 QLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH 196 (251)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC
Confidence 99999999999999999999999988643 7899999999999976 999999965
No 424
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.3e-34 Score=324.43 Aligned_cols=182 Identities=23% Similarity=0.331 Sum_probs=147.9
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
.+-+.||+|.|+... +.+++++|-|.--.+|+||||+|-|||||+++|.|-++|+.|..+=+ -|-+||
T Consensus 586 vLGlH~VtFgy~gqk-pLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn-----------hrL~iG 653 (807)
T KOG0066|consen 586 VLGLHDVTFGYPGQK-PLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN-----------HRLRIG 653 (807)
T ss_pred eeecccccccCCCCC-chhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc-----------ceeeee
Confidence 467899999998654 58999999999999999999999999999999999999999976543 356789
Q ss_pred EEcCccc--c-ccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCC
Q 000463 1347 IIPQEPV--L-FEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1479)
Q Consensus 1347 iIpQdp~--L-F~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1423 (1479)
..-|... | -+.|--+.|.-.-+..-++-+.+|...||........ -..||||||-|++||-.-|+.|
T Consensus 654 ~FdQh~~E~L~~Eetp~EyLqr~FNlpyq~ARK~LG~fGL~sHAHTik----------ikdLSGGQKaRValaeLal~~P 723 (807)
T KOG0066|consen 654 WFDQHANEALNGEETPVEYLQRKFNLPYQEARKQLGTFGLASHAHTIK----------IKDLSGGQKARVALAELALGGP 723 (807)
T ss_pred chhhhhHHhhccccCHHHHHHHhcCCChHHHHHHhhhhhhhhccceEe----------eeecCCcchHHHHHHHHhcCCC
Confidence 8888763 2 2336666654333456677788888888865433221 1359999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHcCCcEEEEEccChhhhhh--cCEE
Q 000463 1424 RLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD--CDRV 1472 (1479)
Q Consensus 1424 ~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~~~TvI~IAHRl~ti~~--~DrI 1472 (1479)
+||||||||.+||.++-..+-++|++. +..||+|+|+-..|.. |.--
T Consensus 724 DvlILDEPTNNLDIESIDALaEAIney--~GgVi~VsHDeRLi~eT~C~Lw 772 (807)
T KOG0066|consen 724 DVLILDEPTNNLDIESIDALAEAINEY--NGGVIMVSHDERLIVETDCNLW 772 (807)
T ss_pred CEEEecCCCCCcchhhHHHHHHHHHhc--cCcEEEEecccceeeecCceEE
Confidence 999999999999999999999999985 5679999999888865 5433
No 425
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=4.4e-35 Score=337.66 Aligned_cols=203 Identities=27% Similarity=0.439 Sum_probs=169.4
Q ss_pred cEEEEeeeeeecCC-------CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChh
Q 000463 1267 NVDLIDLQVRYRSN-------TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH 1339 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~-------~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~ 1339 (1479)
-|+++||+++|+.+ .+++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38899999999741 34699999999999999999999999999999999999999999999999999887653
Q ss_pred ---hhhcceEEEcCccc--cc-cccHhhhcCC-C---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCC
Q 000463 1340 ---DLRSRFGIIPQEPV--LF-EGTVRSNIDP-I---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNW 1405 (1479)
Q Consensus 1340 ---~LR~~i~iIpQdp~--LF-~gTIR~NLdp-~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1405 (1479)
.+|++++++||++. ++ ..|+++|+.. . ...+ ++.+.++++..++... ........|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~----------~~~~~~~~L 152 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDS----------VLDKRPPQL 152 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChh----------HhhCCCccC
Confidence 46889999999983 43 4699999742 1 1111 2245566666655321 122345579
Q ss_pred CchHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1406 SVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1406 SgGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|+|||||++|||||+++|+||||||||++||.++...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|+
T Consensus 153 S~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~ 229 (268)
T PRK10419 153 SGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQ 229 (268)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999999998653 7899999999999986 99999999985
No 426
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-35 Score=338.04 Aligned_cols=209 Identities=26% Similarity=0.373 Sum_probs=169.7
Q ss_pred ccEEEEeeEEEecCCC---CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------
Q 000463 643 IAVEVRDGVFSWDDEN---GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~---~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------- 708 (1479)
..++++|++++|+... ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 3689999999996422 34799999999999999999999999999999999999999999999886
Q ss_pred ---eEEEEeccCc--CCCCcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHH
Q 000463 709 ---TTAYVAQTSW--IQNGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 709 ---~iayv~Q~~~--i~~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1479)
.++|++|+|. ++..|+.||+.|+... +....++. ..+-++.+ |..........+||||||||++|
T Consensus 83 ~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~l 155 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRER-----VDESLKKV--GMYEYRRHAPHLLSGGQKQRVAI 155 (280)
T ss_pred HhhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHH-----HHHHHHHC--CCHhHhhCCcccCCHHHHHHHHH
Confidence 2689999984 5567999999987421 11111111 11122222 11223456778999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHhc
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
|||++.+|+++||||||++||+.+++.+.+.+.+... +|+|+|++||+++++..||++++|++|++++.|+++++...
T Consensus 156 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 156 AGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999999999999999999999999876555444 48999999999999877999999999999999999888653
No 427
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-35 Score=336.54 Aligned_cols=211 Identities=24% Similarity=0.359 Sum_probs=167.9
Q ss_pred CCccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC-------
Q 000463 641 DNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG------- 708 (1479)
Q Consensus 641 ~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g------- 708 (1479)
++..|+++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 16 ~~~~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~ 92 (267)
T PRK14235 16 TEIKMRARDVSVFYG---EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPR 92 (267)
T ss_pred CCceEEEEeEEEEEC---CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccc
Confidence 345799999999995 34799999999999999999999999999999999999974 899999877
Q ss_pred --------eEEEEeccCcCCCCcHHHHHhcCCCCChh--hHHHHHHHhchHHHHHhcccCC--ccccccCCCccchHHHH
Q 000463 709 --------TTAYVAQTSWIQNGTIEENILFGLPMNRA--KYGEVVRVCCLEKDLEMMEYGD--QTEIGERGINLSGGQKQ 776 (1479)
Q Consensus 709 --------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~--~~~~v~~~~~l~~dl~~l~~gd--~t~ig~~g~~LSGGQkq 776 (1479)
.++|++|++.++..|++||+.++...... ...+..+ ...+-++.+...+ ....++.+.+|||||||
T Consensus 93 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~q 170 (267)
T PRK14235 93 LDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDE--IVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQ 170 (267)
T ss_pred cchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHH--HHHHHHHHcCCchhhhHHhhCCcccCCHHHHH
Confidence 26999999988888999999886321100 0000000 0111122222111 12345678899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHH
Q 000463 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNAL 855 (1479)
Q Consensus 777 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 855 (1479)
|++||||++.+|+++||||||++||+.+.+.+.+.+.+ ..+++|+|++||+++.+.. ||++++|++|++++.|+.+++
T Consensus 171 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~-l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14235 171 RLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDE-LRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEKM 249 (267)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHH-HhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999988865544 3457899999999999865 899999999999999998887
Q ss_pred Hh
Q 000463 856 LN 857 (1479)
Q Consensus 856 ~~ 857 (1479)
..
T Consensus 250 ~~ 251 (267)
T PRK14235 250 FT 251 (267)
T ss_pred Hh
Confidence 64
No 428
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=5e-35 Score=335.71 Aligned_cols=205 Identities=27% Similarity=0.387 Sum_probs=168.4
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 708 (1479)
+.++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 4689999999995 35799999999999999999999999999999999999999999998876
Q ss_pred ------------eEEEEeccCcCCC-CcHHHHHhcCCC----CChhhHHHHHHHhchHHHHHhcccCCcccc-ccCCCcc
Q 000463 709 ------------TTAYVAQTSWIQN-GTIEENILFGLP----MNRAKYGEVVRVCCLEKDLEMMEYGDQTEI-GERGINL 770 (1479)
Q Consensus 709 ------------~iayv~Q~~~i~~-~Tv~enI~fg~~----~~~~~~~~v~~~~~l~~dl~~l~~gd~t~i-g~~g~~L 770 (1479)
.++|++|++.++. .|++||+.++.. .+....++ ...+-++.+... ... +..+.+|
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~--~~~~~~~~~~L 153 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARE-----RAVKYLAKVGID--ERAQGKYPVHL 153 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHH-----HHHHHHHHcCCC--hhhhhCCcccC
Confidence 2799999998875 699999987421 11111111 112223333222 122 4667899
Q ss_pred chHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEe
Q 000463 771 SGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQS 849 (1479)
Q Consensus 771 SGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~ 849 (1479)
|||||||++||||++++|+++||||||++||+.+.+.+++.+.+...+|+|+|+|||+++++.. ||+|++|++|++++.
T Consensus 154 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 233 (257)
T PRK10619 154 SGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE 233 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999987655544468999999999999886 899999999999999
Q ss_pred cChHHHHh
Q 000463 850 GRYNALLN 857 (1479)
Q Consensus 850 g~~~~l~~ 857 (1479)
|+++++..
T Consensus 234 ~~~~~~~~ 241 (257)
T PRK10619 234 GAPEQLFG 241 (257)
T ss_pred CCHHHhhh
Confidence 99888754
No 429
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.8e-35 Score=348.98 Aligned_cols=192 Identities=33% Similarity=0.437 Sum_probs=160.0
Q ss_pred cccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------------eEEEEeccCc
Q 000463 660 EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------------------TTAYVAQTSW 718 (1479)
Q Consensus 660 ~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------------~iayv~Q~~~ 718 (1479)
..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .++|++|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 4689999999999999999999999999999999999999999999987 2899999998
Q ss_pred CCC-CcHHHHHhcCCCCC---hhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEe
Q 000463 719 IQN-GTIEENILFGLPMN---RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLD 794 (1479)
Q Consensus 719 i~~-~Tv~enI~fg~~~~---~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLD 794 (1479)
+++ .|++||+.++.... ....+ ....+.++.+.. .......+.+|||||||||+|||||+.+|+|+|||
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~-----~~a~e~le~vgL--~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlD 189 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERR-----KRVDEQLELVGL--AQWADKKPGELSGGMQQRVGLARAFAMDADILLMD 189 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCC--chhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 875 79999999875321 11111 111222333322 12234567899999999999999999999999999
Q ss_pred CccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000463 795 DVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 795 ep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
||||+||+.+++.+++.+.+...+ ++|+|+||||++++. .+|+|++|++|++++.|+++++...
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 190 EPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 999999999999999877765544 899999999999975 5999999999999999999998754
No 430
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-35 Score=335.78 Aligned_cols=210 Identities=24% Similarity=0.377 Sum_probs=168.8
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1479)
..++++|+++.|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (269)
T PRK13648 6 SIIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKH 84 (269)
T ss_pred ceEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhh
Confidence 468999999999642 246899999999999999999999999999999999999999999999882
Q ss_pred EEEEeccCc--CCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 710 TAYVAQTSW--IQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 710 iayv~Q~~~--i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
++|++|+|. +++.|+++|+.++........++..+ .+.+-++.+... .....++.+||||||||++||||++.+
T Consensus 85 i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~--~~~~~~~~~LS~G~~qrl~laral~~~ 160 (269)
T PRK13648 85 IGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR--RVSEALKQVDML--ERADYEPNALSGGQKQRVAIAGVLALN 160 (269)
T ss_pred eeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH--HHHHHHHHcCCc--hhhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 799999985 55679999998874321111111110 011112222221 123456789999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccccCCEEEEEeCCEEEEecChHHHHh
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|+++||||||++||+.+.+.+++.+.+...+ |+|+|++||+++++..||+|++|++|++++.|+++++.+
T Consensus 161 p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 231 (269)
T PRK13648 161 PSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFD 231 (269)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999998766554443 899999999999987799999999999999999888764
No 431
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.8e-36 Score=309.46 Aligned_cols=207 Identities=22% Similarity=0.381 Sum_probs=174.4
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1479)
.+..+|+.++|. .+++++|+||++++||+|++.||||+||||.+.++.|+++|++|+|.++|.
T Consensus 4 ~L~a~~l~K~y~---kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 4 TLVAENLAKSYK---KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred EEEehhhhHhhC---CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 577889999995 468999999999999999999999999999999999999999999999983
Q ss_pred EEEEeccCcCCC-CcHHHHHhcCCCCCh-hhH--HHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHh
Q 000463 710 TAYVAQTSWIQN-GTIEENILFGLPMNR-AKY--GEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1479)
Q Consensus 710 iayv~Q~~~i~~-~Tv~enI~fg~~~~~-~~~--~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 785 (1479)
+||+||+|-+|. .||+|||.--.++.+ ++. ++..+..+|.+++..... -..++.+||||||+|+.|||||.
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hl-----r~~~a~sLSGGERRR~EIARaLa 155 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHL-----RDSKAYSLSGGERRRVEIARALA 155 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHH-----hcCcccccccchHHHHHHHHHHh
Confidence 799999999996 599999987665433 222 222233345555543322 34578999999999999999999
Q ss_pred cCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcc-cccCCEEEEEeCCEEEEecChHHHHhc
Q 000463 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDF-LHNVDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 786 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~-l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
.+|+.+||||||+++||-+...|-+.+.....+|-.|+++-|++.+ +.-|||.+++.+|++..+|+++|+.++
T Consensus 156 ~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 156 ANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred cCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 9999999999999999999999965544555679999999999876 677999999999999999999998764
No 432
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=5e-35 Score=334.55 Aligned_cols=207 Identities=29% Similarity=0.407 Sum_probs=167.2
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------- 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 708 (1479)
.++++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|+.+|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 4889999999952 4699999999999999999999999999999999999999999998765
Q ss_pred ------eEEEEeccCcCCC-CcHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHH
Q 000463 709 ------TTAYVAQTSWIQN-GTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 709 ------~iayv~Q~~~i~~-~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1479)
.++|++|++.++. .|++||+.++.. ......++..+ ...+.++.+.. ......++.+|||||||||+|
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~--~~~~~l~~~gl--~~~~~~~~~~LS~Gq~qrv~l 155 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA--RARELLAKVGL--AGKETSYPRRLSGGQQQRVAI 155 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHcCC--cchhhCChhhCChHHHHHHHH
Confidence 3799999987764 799999987521 11000011101 11222333322 223456788999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|||++.+|+++||||||++||+.+++.+.+.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+.+++.+
T Consensus 156 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 233 (250)
T PRK11264 156 ARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFA 233 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999987655544568999999999999865 89999999999999999988764
No 433
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-35 Score=333.49 Aligned_cols=204 Identities=23% Similarity=0.363 Sum_probs=166.4
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------E
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------T 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------i 710 (1479)
.++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (255)
T PRK11231 2 TLRTENLTVGYG---TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRL 78 (255)
T ss_pred EEEEEeEEEEEC---CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhhe
Confidence 478999999995 357999999999999999999999999999999999999999999999872 7
Q ss_pred EEEeccCcCCC-CcHHHHHhcCCC-C----C--hhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHH
Q 000463 711 AYVAQTSWIQN-GTIEENILFGLP-M----N--RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLAR 782 (1479)
Q Consensus 711 ayv~Q~~~i~~-~Tv~enI~fg~~-~----~--~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 782 (1479)
+|++|++.++. .|++||+.++.. . . .....+ ...+-++.+.. .......+..||||||||++|||
T Consensus 79 ~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l--~~~~~~~~~~LS~G~~qrv~lar 151 (255)
T PRK11231 79 ALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNA-----RVNQAMEQTRI--NHLADRRLTDLSGGQRQRAFLAM 151 (255)
T ss_pred EEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHH-----HHHHHHHHcCC--HHHHcCCcccCCHHHHHHHHHHH
Confidence 99999987765 499999998631 1 1 111111 01111222211 12234677899999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 783 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|++.+|+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++.+.. +|++++|++|+++..|+++++..
T Consensus 152 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 152 VLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 9999999999999999999999999887665544468999999999999865 89999999999999999888754
No 434
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-35 Score=333.75 Aligned_cols=210 Identities=19% Similarity=0.309 Sum_probs=169.4
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1479)
..++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (255)
T PRK11300 4 PLLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARM 80 (255)
T ss_pred ceEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhc
Confidence 3689999999995 357999999999999999999999999999999999999999999999873
Q ss_pred -EEEEeccCcCCC-CcHHHHHhcCCCC-----------ChhhHH--HHHHHhchHHHHHhcccCCccccccCCCccchHH
Q 000463 710 -TAYVAQTSWIQN-GTIEENILFGLPM-----------NRAKYG--EVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQ 774 (1479)
Q Consensus 710 -iayv~Q~~~i~~-~Tv~enI~fg~~~-----------~~~~~~--~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 774 (1479)
++|++|++.++. .|++||+.++... +...+. +........+.++.+. .......++.+|||||
T Consensus 81 ~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--l~~~~~~~~~~LS~G~ 158 (255)
T PRK11300 81 GVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVG--LLEHANRQAGNLAYGQ 158 (255)
T ss_pred CeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCC--hhhhhhCChhhCCHHH
Confidence 688999998876 5999999986310 000000 0000011122233332 2234567888999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecCh
Q 000463 775 KQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRY 852 (1479)
Q Consensus 775 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~ 852 (1479)
|||++||||++.+|+++||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++++.. ||++++|++|++++.|+.
T Consensus 159 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~ 238 (255)
T PRK11300 159 QRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTP 238 (255)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCH
Confidence 99999999999999999999999999999999998766655444 8999999999999865 899999999999999998
Q ss_pred HHHHh
Q 000463 853 NALLN 857 (1479)
Q Consensus 853 ~~l~~ 857 (1479)
+++.+
T Consensus 239 ~~~~~ 243 (255)
T PRK11300 239 EEIRN 243 (255)
T ss_pred HHHhh
Confidence 87753
No 435
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=332.30 Aligned_cols=207 Identities=28% Similarity=0.398 Sum_probs=166.8
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------E
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------T 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------i 710 (1479)
.++++|+++.|++ +++|+|+||++++|++++|+|+||||||||+++|+|+.+|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 4789999999953 46999999999999999999999999999999999999999999999873 7
Q ss_pred EEEeccCcC-CCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHh----
Q 000463 711 AYVAQTSWI-QNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY---- 785 (1479)
Q Consensus 711 ayv~Q~~~i-~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~---- 785 (1479)
+|++|++.+ ++.|++||+.++........++..+ ...+-++.+.. .........+|||||||||+||||++
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~--~~~~~l~~~~l--~~~~~~~~~~LSgGe~qrv~la~al~~~~~ 154 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDA--LVAAALAQVDL--AHLAGRDYPQLSGGEQQRVQLARVLAQLWE 154 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHH--HHHHHHHHcCC--HhHhcCCcccCCHHHHHHHHHHHHHhcccc
Confidence 899999876 6789999998864211100000000 01122222222 12234567899999999999999999
Q ss_pred --cCCCEEEEeCccCCCChhhHHHHHHHHHhhh-cCCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000463 786 --QDCDIYLLDDVFSAVDAHTGSDIFKECVRGA-LKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 786 --~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
.+|+++||||||++||+.+.+++.+.+.+.. .+|+|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 155 ~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 155 PDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred cCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 5999999999999999999999887665544 46899999999999987 599999999999999999888754
No 436
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-35 Score=323.54 Aligned_cols=209 Identities=29% Similarity=0.441 Sum_probs=171.7
Q ss_pred ccEEEEeeEEEecCCCC---------------------cccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCC
Q 000463 643 IAVEVRDGVFSWDDENG---------------------EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKIS 701 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~---------------------~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~ 701 (1479)
..|+++|+++-+..+.. ..-++|+||+|++||+..|.|-+|||||||++++.++++|++
T Consensus 3 ~~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~ 82 (386)
T COG4175 3 VKIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTR 82 (386)
T ss_pred ceEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCC
Confidence 35788888887754211 124789999999999999999999999999999999999999
Q ss_pred cEEEECC-----------------eEEEEeccC-cCCCCcHHHHHhcCCCCC----hhhHHHHHHHhchHHHHHhcccCC
Q 000463 702 GKVKVCG-----------------TTAYVAQTS-WIQNGTIEENILFGLPMN----RAKYGEVVRVCCLEKDLEMMEYGD 759 (1479)
Q Consensus 702 G~i~~~g-----------------~iayv~Q~~-~i~~~Tv~enI~fg~~~~----~~~~~~v~~~~~l~~dl~~l~~gd 759 (1479)
|+|.++| ++++|+|+- .+++.||.||+.||.+.. +++.+++.+ .++.. |.
T Consensus 83 G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~------~l~~V--gL 154 (386)
T COG4175 83 GEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALE------ALELV--GL 154 (386)
T ss_pred ceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHH------HHHHc--Cc
Confidence 9999998 379999985 456789999999998753 233332222 23322 22
Q ss_pred ccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccc-ccCCE
Q 000463 760 QTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFL-HNVDL 837 (1479)
Q Consensus 760 ~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l-~~~D~ 837 (1479)
.-.-...+.+||||+||||.|||||..||||+|+|||||||||--+.++-+++++...+ +||+|+||||+++. +-.||
T Consensus 155 ~~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~r 234 (386)
T COG4175 155 EGYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDR 234 (386)
T ss_pred hhhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccce
Confidence 22223578899999999999999999999999999999999999999998888876544 89999999999985 55899
Q ss_pred EEEEeCCEEEEecChHHHHhcC
Q 000463 838 ILVMREGMIVQSGRYNALLNSG 859 (1479)
Q Consensus 838 i~~l~~G~i~~~g~~~~l~~~~ 859 (1479)
|.+|+||+|++.|+++|++.+.
T Consensus 235 IaimkdG~ivQ~Gtp~eIl~~P 256 (386)
T COG4175 235 IAIMKDGEIVQVGTPEEILLNP 256 (386)
T ss_pred EEEecCCeEEEeCCHHHHHcCc
Confidence 9999999999999999998653
No 437
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-35 Score=334.04 Aligned_cols=206 Identities=26% Similarity=0.404 Sum_probs=166.5
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc--c---CCcEEEECCe--------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH--K---ISGKVKVCGT-------- 709 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~--~---~~G~i~~~g~-------- 709 (1479)
..++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.
T Consensus 11 ~~l~i~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~ 87 (259)
T PRK14274 11 EVYQINGMNLWYG---QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVD 87 (259)
T ss_pred ceEEEeeEEEEEC---CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccC
Confidence 4689999999995 2469999999999999999999999999999999999987 3 6999988762
Q ss_pred -------EEEEeccCcCCCCcHHHHHhcCCCCC----hhhHHHHHHHhchHHHHHhcccCC--ccccccCCCccchHHHH
Q 000463 710 -------TAYVAQTSWIQNGTIEENILFGLPMN----RAKYGEVVRVCCLEKDLEMMEYGD--QTEIGERGINLSGGQKQ 776 (1479)
Q Consensus 710 -------iayv~Q~~~i~~~Tv~enI~fg~~~~----~~~~~~v~~~~~l~~dl~~l~~gd--~t~ig~~g~~LSGGQkq 776 (1479)
++|++|++.+++.|++||+.++.... ++...+. ..+-++.+...+ ......++.+|||||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 88 LVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEI-----VEKSLKDVALWDEVKDRLHTQALSLSGGQQQ 162 (259)
T ss_pred HHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHH-----HHHHHHHcCCchhhhhhhhCCcccCCHHHHH
Confidence 78999999988889999998864221 1111111 111122221111 12345678899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHH
Q 000463 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNAL 855 (1479)
Q Consensus 777 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 855 (1479)
|++||||++.+|+++||||||++||++++..+.+.+.+ ..+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILK-LKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHH-HhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999988765444 4457999999999999865 899999999999999999987
Q ss_pred Hh
Q 000463 856 LN 857 (1479)
Q Consensus 856 ~~ 857 (1479)
.+
T Consensus 242 ~~ 243 (259)
T PRK14274 242 FS 243 (259)
T ss_pred hh
Confidence 64
No 438
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=8.3e-35 Score=328.09 Aligned_cols=200 Identities=28% Similarity=0.352 Sum_probs=160.7
Q ss_pred ccEEEEeeEEEecCCCC-cccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000463 643 IAVEVRDGVFSWDDENG-EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1479)
..++++|++++|++... .++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 36899999999964222 3599999999999999999999999999999999999999999999876
Q ss_pred ----eEEEEeccCcCCC-CcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHH
Q 000463 709 ----TTAYVAQTSWIQN-GTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 709 ----~iayv~Q~~~i~~-~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1479)
.++|++|++.++. .|++||+.++..+ +....+ ....+-++.+... ........+||||||||++|
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~--~~~~~~~~~LS~Ge~qrl~l 157 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSR-----NGAKALLEQLGLG--KRLDHLPAQLSGGEQQRVAL 157 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCH--hHhhCChhhCCHHHHHHHHH
Confidence 3799999987765 6999999875321 111111 0112223333221 12345677999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccccCCEEEEEeCCEEEEe
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHNVDLILVMREGMIVQS 849 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~~D~i~~l~~G~i~~~ 849 (1479)
|||++.+|+++||||||++||+.+.+.+++.+.+...+ |+|+|++||+++++..||++++|++|++++.
T Consensus 158 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 158 ARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999999999998766555443 8999999999999878999999999999753
No 439
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=350.62 Aligned_cols=191 Identities=30% Similarity=0.427 Sum_probs=158.4
Q ss_pred ccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------------eEEEEeccCcCC-CC
Q 000463 661 ECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------------TTAYVAQTSWIQ-NG 722 (1479)
Q Consensus 661 ~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------------~iayv~Q~~~i~-~~ 722 (1479)
++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|++|++.++ +.
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 479999999999999999999999999999999999999999999876 379999999877 46
Q ss_pred cHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCC
Q 000463 723 TIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSA 799 (1479)
Q Consensus 723 Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~sa 799 (1479)
|++|||.++... +.+..++ ...+-++.+.. .........+|||||||||+||||++.+|+++||||||++
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~gL--~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~ 194 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERRE-----KALDALRQVGL--ENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSA 194 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCC--ChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCcc
Confidence 999999986432 1111111 11222333322 2234567789999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 800 VDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 800 LD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
||+.+++.+.+.+.+... .|+|+|++||+++++.. ||+|++|++|++++.|+++++...
T Consensus 195 LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 195 LDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999877665544 48999999999998764 899999999999999999998764
No 440
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=8.7e-35 Score=324.33 Aligned_cols=196 Identities=23% Similarity=0.314 Sum_probs=168.8
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceE
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1479)
-++++|++++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNE--EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCC--ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 5999999999964 3599999999999999999999999999999999999999999999999998752 3466799
Q ss_pred EEcCccccccc-cHhhhcCCC----CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhcc
Q 000463 1347 IIPQEPVLFEG-TVRSNIDPI----GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1479)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~----~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1421 (1479)
++||+|.+|.+ |+++|+... +...++.+.++++..++.+.. +..+ .+||+|||||++||||+++
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrv~laral~~ 154 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGYE-------DTLV----RQLSAGQKKRLALARLWLS 154 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCChhhc-------cCCh----hhCCHHHHHHHHHHHHHhc
Confidence 99999999987 999998521 222345567788888775443 3333 4699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCC
Q 000463 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAG 1478 (1479)
Q Consensus 1422 ~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G 1478 (1479)
+|+||+|||||++||.++.+.+.+.|++.. +++|+|++||+++.+.+ |||+++++..
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~~ 213 (214)
T PRK13543 155 PAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEAA 213 (214)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEeec
Confidence 999999999999999999999999998754 46899999999999977 9999999753
No 441
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=335.19 Aligned_cols=211 Identities=24% Similarity=0.315 Sum_probs=167.4
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC--------
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG-------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g-------- 708 (1479)
+..++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 19 ~~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 95 (268)
T PRK14248 19 EHILEVKDLSIYYG---EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNI 95 (268)
T ss_pred CceEEEEEEEEEeC---CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccc
Confidence 35799999999995 3469999999999999999999999999999999999864 6899998875
Q ss_pred -------eEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccC--CccccccCCCccchHHHHHHH
Q 000463 709 -------TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYG--DQTEIGERGINLSGGQKQRIQ 779 (1479)
Q Consensus 709 -------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~g--d~t~ig~~g~~LSGGQkqRv~ 779 (1479)
.++|++|++.+++.|++||+.++............+. ...+.++.+... .....+.++.+||||||||++
T Consensus 96 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl~ 174 (268)
T PRK14248 96 NVVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDE-IVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLC 174 (268)
T ss_pred cHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHH-HHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHHH
Confidence 3799999999888899999987642211111111110 011112222111 112345678899999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 780 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
||||++.+|+++||||||++||+.+++.+.+.+.+. .+++|+|++||+++++.. ||++++|++|++++.|+++++.+
T Consensus 175 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 252 (268)
T PRK14248 175 IARTLAMKPAVLLLDEPASALDPISNAKIEELITEL-KEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIFT 252 (268)
T ss_pred HHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHH-hcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999987655444 457899999999998764 89999999999999999888764
No 442
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=328.85 Aligned_cols=205 Identities=23% Similarity=0.349 Sum_probs=167.3
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1479)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|..+|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYG---KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeC---CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 589999999995 357999999999999999999999999999999999999999999998872
Q ss_pred EEEEeccCcCCC-CcHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 710 TAYVAQTSWIQN-GTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 710 iayv~Q~~~i~~-~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
++|++|++.++. .|++||+.++... +....++.+ .+-++.++..+. .......+||||||||++||||++.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~~l~~-~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFPRLHE-RRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHHHHHH-HHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 789999988776 5999999886432 111111111 111222211111 12346779999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++++. .||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 9999999999999999999998766655556899999999999875 489999999999999999988753
No 443
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.4e-35 Score=330.76 Aligned_cols=202 Identities=31% Similarity=0.468 Sum_probs=164.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------eE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------TT 710 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~i 710 (1479)
++++|+++.|++ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 468999999952 4799999999999999999999999999999999999999999999886 27
Q ss_pred EEEeccCcCCC-CcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCC
Q 000463 711 AYVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1479)
Q Consensus 711 ayv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 789 (1479)
+|++|++.++. .|++||+.++.........+.. .+-++.++ +......++..+||||||||++||||++.+|+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 151 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIP-----DEIYELFP-VLKEMLGRRGGDLSGGQQQQLAIARALVTRPK 151 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHH-----HHHHHHHH-hHHHHhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999998775 4999999876432111111111 11112211 11122356778999999999999999999999
Q ss_pred EEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHH
Q 000463 790 IYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNAL 855 (1479)
Q Consensus 790 illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 855 (1479)
++||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++++.. ||+++++++|++++.|+.+++
T Consensus 152 illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 152 LLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999998766655443 8999999999999885 899999999999999998876
No 444
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=5e-35 Score=349.40 Aligned_cols=193 Identities=28% Similarity=0.442 Sum_probs=166.8
Q ss_pred eeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCC----hhhhhcceEE
Q 000463 1272 DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG----LHDLRSRFGI 1347 (1479)
Q Consensus 1272 nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~----l~~LR~~i~i 1347 (1479)
|++++|.. . .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ....|+++++
T Consensus 4 ~l~~~~~~--~-~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGD--F-SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECC--E-EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 78999964 2 35 999999999999999999999999999999999999999999999987542 3456889999
Q ss_pred EcCccccccc-cHhhhcCCC-CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhcc
Q 000463 1348 IPQEPVLFEG-TVRSNIDPI-GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~-~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1421 (1479)
+||++.+|.+ |+++|+... .... ++++.++++..++.+.....| .+||||||||++|||||++
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGqkqRvalAraL~~ 148 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLLGRLP-----------GRLSGGEKQRVAIGRALLS 148 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHhcCCh-----------hhCCHHHHHHHHHHHHHHc
Confidence 9999999976 999999632 1111 235778888888876655443 4689999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1422 ~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 ~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 149 SPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999998654 7899999999999977 99999999995
No 445
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-35 Score=331.04 Aligned_cols=207 Identities=18% Similarity=0.336 Sum_probs=167.7
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------e
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------T 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~ 709 (1479)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| .
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYK---GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 478999999995 35799999999999999999999999999999999999999999999887 2
Q ss_pred EEEEeccCcCCC-CcHHHHHhcCCCCChh-hHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 710 TAYVAQTSWIQN-GTIEENILFGLPMNRA-KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 710 iayv~Q~~~i~~-~Tv~enI~fg~~~~~~-~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
++|++|++.++. .|++||+.++...... ..++.. ....+.++.+.. ......+..+||||||||++||||++.+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~--~~~~~~l~~~~l--~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE--DRANELMEEFHI--EHLRDSMGQSLSGGERRRVEIARALAAN 155 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHH--HHHHHHHHHcCC--HHHhhcchhhCCHHHHHHHHHHHHHhcC
Confidence 799999987765 6999999876422110 000100 111223343322 2234567789999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 156 PKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999998876554444468999999999988765 89999999999999999888754
No 446
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=7.3e-35 Score=311.43 Aligned_cols=162 Identities=28% Similarity=0.430 Sum_probs=146.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--eEEEEeccCcCCCC
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--TTAYVAQTSWIQNG 722 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~iayv~Q~~~i~~~ 722 (1479)
|+++|++++|++ ++++|+|+||++++||+++|+|+||||||||+++|+|+.+|++|+|.++| .++|++|++.+++.
T Consensus 1 i~~~~~~~~~~~--~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~~~~~ 78 (166)
T cd03223 1 IELENLSLATPD--GRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYLPLG 78 (166)
T ss_pred CEEEEEEEEcCC--CCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCccccc
Confidence 468999999953 24699999999999999999999999999999999999999999999987 79999999998889
Q ss_pred cHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCCh
Q 000463 723 TIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDA 802 (1479)
Q Consensus 723 Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~ 802 (1479)
|++||+.++ ++.+||||||||++||||++.+|+++||||||++||+
T Consensus 79 tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~ 124 (166)
T cd03223 79 TLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDE 124 (166)
T ss_pred cHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCH
Confidence 999999864 3468999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCE
Q 000463 803 HTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGM 845 (1479)
Q Consensus 803 ~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~ 845 (1479)
++.+.+.+.+.+ . ++|+|++||+++....||++++|++|.
T Consensus 125 ~~~~~l~~~l~~-~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 125 ESEDRLYQLLKE-L--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred HHHHHHHHHHHH-h--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 999988865543 2 689999999998877799999998753
No 447
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=6.6e-35 Score=327.87 Aligned_cols=203 Identities=25% Similarity=0.379 Sum_probs=165.2
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------e
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------T 709 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ 709 (1479)
..|+++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| .
T Consensus 6 ~~i~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (225)
T PRK10247 6 PLLQLQNVGYLAG---DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQ 82 (225)
T ss_pred ceEEEeccEEeeC---CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhc
Confidence 4699999999995 34799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCC
Q 000463 710 TAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1479)
Q Consensus 710 iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 789 (1479)
++|++|++.+++.|++||+.++..+...... .....+.++.+... .+.....+.+|||||||||+||||++.+|+
T Consensus 83 i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~----~~~~~~~l~~~~l~-~~~~~~~~~~LS~G~~qrv~laral~~~p~ 157 (225)
T PRK10247 83 VSYCAQTPTLFGDTVYDNLIFPWQIRNQQPD----PAIFLDDLERFALP-DTILTKNIAELSGGEKQRISLIRNLQFMPK 157 (225)
T ss_pred cEEEecccccccccHHHHHHhHHhhcCCChH----HHHHHHHHHHcCCC-hHHhcCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 7999999998888999999875322111111 01122334444321 123467788999999999999999999999
Q ss_pred EEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccccCCEEEEEe-CCEEEEecChH
Q 000463 790 IYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMR-EGMIVQSGRYN 853 (1479)
Q Consensus 790 illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~~D~i~~l~-~G~i~~~g~~~ 853 (1479)
++||||||++||+.+.+.+.+.+.+... +|+|+|++||++++++.||++++|+ ++..+++|+|+
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 158 VLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999988866555444 4899999999999998899999995 66677777764
No 448
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-35 Score=336.19 Aligned_cols=196 Identities=24% Similarity=0.411 Sum_probs=165.5
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhh-cce
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLR-SRF 1345 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR-~~i 1345 (1479)
.++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..+ +++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~----~~~~~~i 80 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ----ALQKNLV 80 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH----hhccceE
Confidence 58999999999633 459999999999999999999999999999999999999999999999999752 233 469
Q ss_pred EEEcCcccc---ccccHhhhcCCC--------C---CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHH
Q 000463 1346 GIIPQEPVL---FEGTVRSNIDPI--------G---QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1479)
Q Consensus 1346 ~iIpQdp~L---F~gTIR~NLdp~--------~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1411 (1479)
+++||+|.+ +..++++|+... . ...++++.++++..++.+.... .+ .+|||||||
T Consensus 81 ~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-------~~----~~LSgG~~q 149 (272)
T PRK15056 81 AYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHR-------QI----GELSGGQKK 149 (272)
T ss_pred EEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcC-------Cc----ccCCHHHHH
Confidence 999999965 456889997521 0 1123457788899988765433 22 369999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1412 rl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+++++ +|+
T Consensus 150 rv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~ 218 (272)
T PRK15056 150 RVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGT 218 (272)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCE
Confidence 9999999999999999999999999999999999999864 47899999999999866 9999777 674
No 449
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-35 Score=333.55 Aligned_cols=206 Identities=26% Similarity=0.363 Sum_probs=167.2
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC---------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG--------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g--------- 708 (1479)
..++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|..+| ++|+|.++|
T Consensus 11 ~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 87 (258)
T PRK14268 11 PQIKVENLNLWYG---EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD 87 (258)
T ss_pred eeEEEeeeEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch
Confidence 4799999999995 34699999999999999999999999999999999999875 799998876
Q ss_pred ------eEEEEeccCcCCCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCC--ccccccCCCccchHHHHH
Q 000463 709 ------TTAYVAQTSWIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGD--QTEIGERGINLSGGQKQR 777 (1479)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd--~t~ig~~g~~LSGGQkqR 777 (1479)
.++|++|++.++..|++||+.++.. .+.+..++. ..+-++.+...+ .....+++.+||||||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qr 162 (258)
T PRK14268 88 VVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGV-----VENALRSAALWDETSDRLKSPALSLSGGQQQR 162 (258)
T ss_pred HHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCCcchhhhhcCChhhCCHHHHHH
Confidence 2789999998888999999988632 111111110 111222221110 123456788999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHH
Q 000463 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALL 856 (1479)
Q Consensus 778 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~ 856 (1479)
|+||||++.+|+++||||||++||+.++..+.+.+.+. .+++|+|++||+++++.. ||++++|++|++++.|+++++.
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l-~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNL-KKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHH-hhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999988655544 458999999999999865 8999999999999999998876
Q ss_pred h
Q 000463 857 N 857 (1479)
Q Consensus 857 ~ 857 (1479)
.
T Consensus 242 ~ 242 (258)
T PRK14268 242 H 242 (258)
T ss_pred c
Confidence 4
No 450
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=334.60 Aligned_cols=205 Identities=26% Similarity=0.386 Sum_probs=168.5
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC--------
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG-------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g-------- 708 (1479)
...|+++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 18 ~~~l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 18 EIALSTKDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred CeEEEEeeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 45799999999995 3579999999999999999999999999999999999986 5899998876
Q ss_pred -------eEEEEeccCcCCCCcHHHHHhcCCCC----Chhh----HHHHHHHhchHHHHHhcccCCccccccCCCccchH
Q 000463 709 -------TTAYVAQTSWIQNGTIEENILFGLPM----NRAK----YGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGG 773 (1479)
Q Consensus 709 -------~iayv~Q~~~i~~~Tv~enI~fg~~~----~~~~----~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGG 773 (1479)
.++|++|++.++..|++||+.++... ++.. ..+.++..++.+++ ....++.+.+||||
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~G 167 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-------KDDLHKSALTLSGG 167 (267)
T ss_pred ChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-------hhhhcCCcccCCHH
Confidence 27999999998888999999886321 1111 11112222221111 12356778899999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecCh
Q 000463 774 QKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRY 852 (1479)
Q Consensus 774 QkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~ 852 (1479)
||||++||||++.+|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++++.. ||++++|++|++++.|++
T Consensus 168 ~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~ 246 (267)
T PRK14237 168 QQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFEL-KKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKT 246 (267)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-hcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999888755544 457999999999999864 999999999999999999
Q ss_pred HHHHh
Q 000463 853 NALLN 857 (1479)
Q Consensus 853 ~~l~~ 857 (1479)
+++..
T Consensus 247 ~~~~~ 251 (267)
T PRK14237 247 RNIFT 251 (267)
T ss_pred HHHhc
Confidence 88764
No 451
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-35 Score=335.69 Aligned_cols=203 Identities=26% Similarity=0.385 Sum_probs=164.9
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------e
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------------T 709 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------~ 709 (1479)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQ---DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcC---CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 68999999995 24699999999999999999999999999999999999999999999876 2
Q ss_pred EEEEeccCc--CCCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 710 TAYVAQTSW--IQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 710 iayv~Q~~~--i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
++|++|++. ++..|+.||+.++.. .+.....+ ...+-++.+...+ .......+||||||||++||||+
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~--~~~~~~~~LSgG~~qrl~laraL 151 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITR-----RVDEALTLVDAQH--FRHQPIQCLSHGQKKRVAIAGAL 151 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHh--HhcCCchhCCHHHHHHHHHHHHH
Confidence 789999975 466789999987522 11111111 0111222222111 12456789999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+.+|+++||||||++||+.+++.+.+.+.+...+|+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 152 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (271)
T PRK13638 152 VLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFA 225 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999987665554568999999999999865 99999999999999999888754
No 452
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=7.9e-35 Score=310.24 Aligned_cols=156 Identities=31% Similarity=0.579 Sum_probs=145.3
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChh-hhhcceE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH-DLRSRFG 1346 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~-~LR~~i~ 1346 (1479)
++++|++++|+. .++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|++++
T Consensus 1 l~~~~l~~~~~~--~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGG--VKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 578999999964 3599999999999999999999999999999999999999999999999999888764 4678899
Q ss_pred EEcCccccccccHhhhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEE
Q 000463 1347 IIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLL 1426 (1479)
Q Consensus 1347 iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1426 (1479)
++|| ||+|||||++||||++++|++|
T Consensus 79 ~~~q------------------------------------------------------LS~G~~qrl~laral~~~p~il 104 (163)
T cd03216 79 MVYQ------------------------------------------------------LSVGERQMVEIARALARNARLL 104 (163)
T ss_pred EEEe------------------------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 9999 8999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1427 FMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1427 iLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+|||||++||.++.+.+.+.|++.. ++.|+|+++|+++.+.. |||+++|++|+
T Consensus 105 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~ 159 (163)
T cd03216 105 ILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGR 159 (163)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999864 47899999999998876 99999999985
No 453
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5.9e-35 Score=326.08 Aligned_cols=196 Identities=24% Similarity=0.388 Sum_probs=156.4
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe---------------
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------- 709 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------- 709 (1479)
++++|+++.|++. +++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4688999999532 46999999999999999999999999999999999999999999998763
Q ss_pred -EEEEeccCcCCC-CcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 710 -TAYVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 710 -iayv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
++|++|++.++. .|++||+.++........++..+ .+.+-++.+.. .........+||||||||++||||++.+
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~~l--~~~~~~~~~~LS~G~~qrv~laral~~~ 154 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRK--RVPAALELVGL--SHKHRALPAELSGGEQQRVAIARAIVNS 154 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCC--HHHhhCChhhcCHHHHHHHHHHHHHHcC
Confidence 799999987765 69999998763211000111100 11122222221 1123456679999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEE
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMI 846 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i 846 (1479)
|+++||||||++||+++.+.+.+.+.+...+|+|+|++||+++++.. ||++++|++|++
T Consensus 155 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 155 PTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999987665554568999999999999875 899999999974
No 454
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=7.5e-35 Score=335.52 Aligned_cols=209 Identities=26% Similarity=0.365 Sum_probs=168.0
Q ss_pred cEEEEeeEEEecCC------CCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------
Q 000463 644 AVEVRDGVFSWDDE------NGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------- 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~------~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------- 708 (1479)
.++++|+++.|+.. .++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 47899999999632 135799999999999999999999999999999999999999999999877
Q ss_pred -------eEEEEeccCc--C-CCCcHHHHHhcCCC----CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHH
Q 000463 709 -------TTAYVAQTSW--I-QNGTIEENILFGLP----MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQ 774 (1479)
Q Consensus 709 -------~iayv~Q~~~--i-~~~Tv~enI~fg~~----~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 774 (1479)
.++|++|++. + +..|++||+.++.. ++....+ ....+-++.+... ....+.++.+|||||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~-~~~~~~~~~~LSgGe 155 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQK-----ARIAELLDMVGLR-SEDADKLPRQLSGGQ 155 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCC-hhhhhCChhhCCHHH
Confidence 2899999973 3 35799999976421 1111111 1112223333221 122456778999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEecCh
Q 000463 775 KQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRY 852 (1479)
Q Consensus 775 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~ 852 (1479)
||||+||||++++|+++||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++.+.. ||++++|++|++++.|+.
T Consensus 156 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (265)
T TIGR02769 156 LQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDV 235 (265)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCH
Confidence 99999999999999999999999999999999888766555443 8999999999999875 899999999999999999
Q ss_pred HHHHhc
Q 000463 853 NALLNS 858 (1479)
Q Consensus 853 ~~l~~~ 858 (1479)
+++...
T Consensus 236 ~~~~~~ 241 (265)
T TIGR02769 236 AQLLSF 241 (265)
T ss_pred HHHcCC
Confidence 998763
No 455
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=6.9e-35 Score=327.81 Aligned_cols=199 Identities=23% Similarity=0.378 Sum_probs=165.7
Q ss_pred EEEEeeeeeecC----C-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEc--C--EecCCCCh
Q 000463 1268 VDLIDLQVRYRS----N-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIID--G--IDISLLGL 1338 (1479)
Q Consensus 1268 I~~~nvs~~Y~~----~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~ID--G--~dI~~i~l 1338 (1479)
++++|++++|+. + .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+| | +++...+.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 689999999963 1 2469999999999999999999999999999999999999999999998 4 37766665
Q ss_pred hh---h-hcceEEEcCccccccc-cHhhhcCC-C--CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCC
Q 000463 1339 HD---L-RSRFGIIPQEPVLFEG-TVRSNIDP-I--GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWS 1406 (1479)
Q Consensus 1339 ~~---L-R~~i~iIpQdp~LF~g-TIR~NLdp-~--~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1406 (1479)
.. + +++++++||+|.+|.. |+++|+.. . .... ++++.++++..++.+..... ...+||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~~LS 151 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHL----------PPATFS 151 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhC----------CcccCC
Confidence 54 3 4579999999988875 99999852 1 1122 35667788888776533221 245799
Q ss_pred chHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh-cCEEEEEe
Q 000463 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVD 1476 (1479)
Q Consensus 1407 gGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~ 1476 (1479)
+|||||++|||||+++|++|+|||||++||+++.+.+.+.|++.. +++|+|+|+|+++.+.+ ||||+.+.
T Consensus 152 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~~ 223 (224)
T TIGR02324 152 GGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDVT 223 (224)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEecC
Confidence 999999999999999999999999999999999999999999864 47899999999999875 99999863
No 456
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=334.42 Aligned_cols=210 Identities=25% Similarity=0.356 Sum_probs=166.7
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1479)
+..++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 9 ~~~l~i~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 85 (265)
T PRK10575 9 DTTFALRNVSFRVP---GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFAR 85 (265)
T ss_pred CceEEEeeEEEEEC---CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhh
Confidence 35799999999995 24799999999999999999999999999999999999999999999987
Q ss_pred eEEEEeccCcC-CCCcHHHHHhcCCC-CCh--hhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 709 TTAYVAQTSWI-QNGTIEENILFGLP-MNR--AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 709 ~iayv~Q~~~i-~~~Tv~enI~fg~~-~~~--~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
.++|++|++-+ +..|++||+.++.. ... ....... ......-++.+.. ...+.....+|||||||||+||||+
T Consensus 86 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~l--~~~~~~~~~~LSgG~~qrv~laral 162 (265)
T PRK10575 86 KVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAAD-REKVEEAISLVGL--KPLAHRLVDSLSGGERQRAWIAMLV 162 (265)
T ss_pred heEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHH-HHHHHHHHHHcCC--HHHhcCCcccCCHHHHHHHHHHHHH
Confidence 27999999755 45699999998632 100 0000000 0011122222221 1134456779999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+.+|+++||||||++||+.+++.+.+.+.+...+ |+|+|++||+++++. .||+|++|++|++++.|+.+++..
T Consensus 163 ~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 163 AQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 9999999999999999999999988766554444 899999999999986 489999999999999999887754
No 457
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-35 Score=325.17 Aligned_cols=194 Identities=20% Similarity=0.330 Sum_probs=155.7
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eEEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TTAY 712 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~iay 712 (1479)
|+++|+++.|++ +++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEE
Confidence 468999999953 47999999999999 9999999999999999999999999999999987 3799
Q ss_pred EeccCcCCC-CcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCC
Q 000463 713 VAQTSWIQN-GTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1479)
Q Consensus 713 v~Q~~~i~~-~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 788 (1479)
++|++.++. .|++||+.+.... +.+..++. ..+-++.+... ........+||||||||++||||++++|
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~--~~~~~~~~~LS~G~~qrv~la~al~~~p 149 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKAR-----VDEVLELVNLG--DRAKKKIGSLSGGMRRRVGIAQALVGDP 149 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHH-----HHHHHHHCCCH--HHHhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999998775 5999999874221 11111110 11112222111 1123466789999999999999999999
Q ss_pred CEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEec
Q 000463 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1479)
Q Consensus 789 ~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1479)
+++||||||++||+.+.+.+++.+.+.. +++|+|++||+++++.. +|++++|++|++++.|
T Consensus 150 ~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 150 SILIVDEPTAGLDPEERIRFRNLLSELG-EDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHh-CCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999986654443 46999999999999865 8999999999998754
No 458
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=331.41 Aligned_cols=210 Identities=27% Similarity=0.378 Sum_probs=166.6
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcC---ccc--CCcEEEECC---------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGE---MHK--ISGKVKVCG--------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~---~~~--~~G~i~~~g--------- 708 (1479)
..++++|+++.|+. +++|+|+||++++||+++|+|+||||||||+++|+|+ .+| ++|+|.++|
T Consensus 2 ~~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14245 2 VKIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQ 78 (250)
T ss_pred cEEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEeccccccc
Confidence 36889999999952 4699999999999999999999999999999999996 454 589998876
Q ss_pred ------eEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCC--ccccccCCCccchHHHHHHHH
Q 000463 709 ------TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGD--QTEIGERGINLSGGQKQRIQL 780 (1479)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd--~t~ig~~g~~LSGGQkqRv~L 780 (1479)
.++|+||++.+++.|++||+.++.........+..+ ....+-++.+...+ .+..++.+.+||||||||++|
T Consensus 79 ~~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 157 (250)
T PRK14245 79 VDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIR-QRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLCI 157 (250)
T ss_pred HHHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHH-HHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHH
Confidence 279999999888889999998763211000000000 00111222222211 123467788999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 781 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|||++.+|+++||||||++||+.+++.+.+.+.+. .+++|+|++||+++++.. ||++++|++|++++.|+++++.+
T Consensus 158 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~ 234 (250)
T PRK14245 158 ARAMAVSPSVLLMDEPASALDPISTAKVEELIHEL-KKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFT 234 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHH-hcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999988765554 468999999999999865 89999999999999999998865
No 459
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=334.86 Aligned_cols=205 Identities=27% Similarity=0.417 Sum_probs=167.4
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------E
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------T 710 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------i 710 (1479)
.++++|++++|+. .+++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 4789999999953 236999999999999999999999999999999999999999999999872 7
Q ss_pred EEEeccC--cCCCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHh
Q 000463 711 AYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1479)
Q Consensus 711 ayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 785 (1479)
+|++|++ .+++.|++||+.++.. .+.+..++. ..+-++.+... ......+..||||||||++||||++
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~--~~~~~~~~~LS~Gq~qrl~laraL~ 153 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHR-----VSSALHMLGLE--ELRDRVPHHLSGGEKKRVAIAGVIA 153 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHCCCh--hHhcCCcccCCHHHHHHHHHHHHHH
Confidence 9999997 3567899999987532 222211111 11112222211 1244567899999999999999999
Q ss_pred cCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000463 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 786 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
.+|+++||||||++||+.+++.+++.+.+...+ |+|+|++||+++++. .||++++|++|++++.|+++++.+
T Consensus 154 ~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 154 MEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 999999999999999999999988766555444 899999999999986 589999999999999999998865
No 460
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=333.35 Aligned_cols=207 Identities=29% Similarity=0.414 Sum_probs=167.2
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC--------
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG-------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g-------- 708 (1479)
+..++++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 11 ~~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~ 87 (269)
T PRK14259 11 NIIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRV 87 (269)
T ss_pred CceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccC
Confidence 457999999999953 469999999999999999999999999999999999987 6899999876
Q ss_pred -------eEEEEeccCcCCCCcHHHHHhcCCCCCh--hhHHHHHHHhchHHHHHhccc--CCccccccCCCccchHHHHH
Q 000463 709 -------TTAYVAQTSWIQNGTIEENILFGLPMNR--AKYGEVVRVCCLEKDLEMMEY--GDQTEIGERGINLSGGQKQR 777 (1479)
Q Consensus 709 -------~iayv~Q~~~i~~~Tv~enI~fg~~~~~--~~~~~v~~~~~l~~dl~~l~~--gd~t~ig~~g~~LSGGQkqR 777 (1479)
.++|++|++.++..|++||+.++..... ...++..+ +.++.+.. +.......++.+||||||||
T Consensus 88 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 162 (269)
T PRK14259 88 DPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVE-----RSLRKAAVWDECKDKLNESGYSLSGGQQQR 162 (269)
T ss_pred CHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHH-----HHHHHhCCcchhhhhhCCCcccCCHHHHHH
Confidence 2799999998887899999998753211 11111111 11122111 11223456778999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeC-----------CE
Q 000463 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMRE-----------GM 845 (1479)
Q Consensus 778 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~-----------G~ 845 (1479)
++||||++.+|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++++.. ||++++|++ |+
T Consensus 163 l~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~-~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 163 LCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHEL-KKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 99999999999999999999999999999998755443 457999999999998865 899999996 67
Q ss_pred EEEecChHHHHh
Q 000463 846 IVQSGRYNALLN 857 (1479)
Q Consensus 846 i~~~g~~~~l~~ 857 (1479)
+++.|+.+++.+
T Consensus 242 ~~~~~~~~~~~~ 253 (269)
T PRK14259 242 LVEFNETKKIFN 253 (269)
T ss_pred EEEeCCHHHHHh
Confidence 899999988865
No 461
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=331.72 Aligned_cols=205 Identities=31% Similarity=0.389 Sum_probs=166.2
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC----------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG---------- 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g---------- 708 (1479)
.++++|+++.|++ +++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4889999999953 4699999999999999999999999999999999999974 799999887
Q ss_pred ---eEEEEeccCcC-CCCcHHHHHhcCCCCC-----hhhHHHHHHHhchHHHHHhcccCC--ccccccCCCccchHHHHH
Q 000463 709 ---TTAYVAQTSWI-QNGTIEENILFGLPMN-----RAKYGEVVRVCCLEKDLEMMEYGD--QTEIGERGINLSGGQKQR 777 (1479)
Q Consensus 709 ---~iayv~Q~~~i-~~~Tv~enI~fg~~~~-----~~~~~~v~~~~~l~~dl~~l~~gd--~t~ig~~g~~LSGGQkqR 777 (1479)
.++|++|++.+ ++.|++||+.++.... ...+++ .+.+.++.+...+ .......+.+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qr 154 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQE-----RVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQR 154 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHH-----HHHHHHHHcCCCcchhhhhcCCcccCCHHHHHH
Confidence 27999999864 5689999998764321 111111 1122233322111 123456778999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHH
Q 000463 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALL 856 (1479)
Q Consensus 778 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~ 856 (1479)
|+||||++.+|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++++. .||++++|++|++++.|+++++.
T Consensus 155 v~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 155 LCIARALAFQPEVLLADEPTANLDPENTAKIESLFLEL-KKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 99999999999999999999999999999998766554 45899999999999986 48999999999999999998876
Q ss_pred h
Q 000463 857 N 857 (1479)
Q Consensus 857 ~ 857 (1479)
+
T Consensus 234 ~ 234 (250)
T PRK14247 234 T 234 (250)
T ss_pred c
Confidence 4
No 462
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=333.70 Aligned_cols=210 Identities=24% Similarity=0.321 Sum_probs=168.2
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------ 709 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------ 709 (1479)
+..|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 5 ~~~l~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (265)
T PRK10253 5 VARLRGEQLTLGYG---KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVAR 81 (265)
T ss_pred ccEEEEEEEEEEEC---CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhh
Confidence 45799999999996 346999999999999999999999999999999999999999999999873
Q ss_pred -EEEEeccCcCC-CCcHHHHHhcCC-CCCh--hhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 710 -TAYVAQTSWIQ-NGTIEENILFGL-PMNR--AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 710 -iayv~Q~~~i~-~~Tv~enI~fg~-~~~~--~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
++|++|++.++ +.|++||+.++. +... ..+.+..+ ....+-++.+.. .......+.+||||||||++||||+
T Consensus 82 ~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~l--~~~~~~~~~~LS~Gq~qrv~laral 158 (265)
T PRK10253 82 RIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDE-EAVTKAMQATGI--THLADQSVDTLSGGQRQRAWIAMVL 158 (265)
T ss_pred heEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHH-HHHHHHHHHcCC--HHHhcCCcccCChHHHHHHHHHHHH
Confidence 79999998765 579999998763 1100 00000000 001112222221 1224567789999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+.+|+++||||||++||+.+++.+.+.+.+... +|+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 159 ~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (265)
T PRK10253 159 AQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVT 233 (265)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhh
Confidence 999999999999999999999999876655544 38999999999998765 89999999999999999888754
No 463
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=334.60 Aligned_cols=212 Identities=24% Similarity=0.348 Sum_probs=168.3
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC--------
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG-------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g-------- 708 (1479)
...++++|+++.|++ +++|+|+||+|++||+++|+|+||||||||+++|+|..+ |++|+|.++|
T Consensus 22 ~~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 98 (271)
T PRK14238 22 KVVFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSY 98 (271)
T ss_pred ceEEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccc
Confidence 347999999999953 469999999999999999999999999999999999987 6999999876
Q ss_pred -------eEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcc--cCCccccccCCCccchHHHHHHH
Q 000463 709 -------TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMME--YGDQTEIGERGINLSGGQKQRIQ 779 (1479)
Q Consensus 709 -------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~--~gd~t~ig~~g~~LSGGQkqRv~ 779 (1479)
.++|++|++.++..|++||+.++........++..+. .+.+-++.+. .+.....++++.+||||||||++
T Consensus 99 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv~ 177 (271)
T PRK14238 99 SVEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDE-IVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRLC 177 (271)
T ss_pred cHHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHH-HHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHHH
Confidence 2799999999888899999987532111001111110 0111111111 01112345678899999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000463 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1479)
Q Consensus 780 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1479)
||||++.+|+++||||||++||+.+.+.+.+.+.+ +.+++|+|++||+++++.. ||++++|++|++++.|+++++.+.
T Consensus 178 laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~-~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~~ 256 (271)
T PRK14238 178 IARCLAIEPDVILMDEPTSALDPISTLKVEELVQE-LKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIFSN 256 (271)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHH-HHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHHcC
Confidence 99999999999999999999999999998865544 4457999999999999865 899999999999999999887643
No 464
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-35 Score=342.86 Aligned_cols=210 Identities=22% Similarity=0.338 Sum_probs=167.6
Q ss_pred cEEEEeeEEEecCCCC-cccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc----cCCcEEEECCe---------
Q 000463 644 AVEVRDGVFSWDDENG-EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH----KISGKVKVCGT--------- 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~----~~~G~i~~~g~--------- 709 (1479)
.++++|++++|+.... ..+|+||||+|++||+++|+|+||||||||+++|+|+++ +++|+|.++|.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4799999999964322 469999999999999999999999999999999999997 48999999872
Q ss_pred --------EEEEeccCc---CCCCcHHHHHhcCCC----CChhhHHHHHHHhchHHHHHhcccCC-ccccccCCCccchH
Q 000463 710 --------TAYVAQTSW---IQNGTIEENILFGLP----MNRAKYGEVVRVCCLEKDLEMMEYGD-QTEIGERGINLSGG 773 (1479)
Q Consensus 710 --------iayv~Q~~~---i~~~Tv~enI~fg~~----~~~~~~~~v~~~~~l~~dl~~l~~gd-~t~ig~~g~~LSGG 773 (1479)
++|++|+|. .+..|+.+++..... .+.+..++ + ..+-++.+...+ ....+..+.+||||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~--~---~~~~L~~~gL~~~~~~l~~~p~~LSgG 157 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQ--R---AIDLLNQVGIPDPASRLDVYPHQLSGG 157 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHH--H---HHHHHHHCCCCChHHHHhCCchhCCHH
Confidence 799999984 345688777654211 11111111 1 122233333322 12356788999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecC
Q 000463 774 QKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGR 851 (1479)
Q Consensus 774 QkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~ 851 (1479)
|||||+||||++.+|+++|+||||++||+.++..+.+.+.+... .|.|+|+||||++.+. .||+|++|++|+|++.|+
T Consensus 158 q~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~ 237 (326)
T PRK11022 158 MSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGK 237 (326)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999877666544 4899999999999986 499999999999999999
Q ss_pred hHHHHhc
Q 000463 852 YNALLNS 858 (1479)
Q Consensus 852 ~~~l~~~ 858 (1479)
.+++.+.
T Consensus 238 ~~~~~~~ 244 (326)
T PRK11022 238 AHDIFRA 244 (326)
T ss_pred HHHHhhC
Confidence 9998764
No 465
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=331.70 Aligned_cols=209 Identities=26% Similarity=0.350 Sum_probs=165.9
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCc--cc---CCcEEEECC----------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEM--HK---ISGKVKVCG---------- 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~--~~---~~G~i~~~g---------- 708 (1479)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|.. +| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 5899999999952 46999999999999999999999999999999999985 36 599999876
Q ss_pred -----eEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccC--CccccccCCCccchHHHHHHHHH
Q 000463 709 -----TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYG--DQTEIGERGINLSGGQKQRIQLA 781 (1479)
Q Consensus 709 -----~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~g--d~t~ig~~g~~LSGGQkqRv~LA 781 (1479)
.++|++|++.+++.|++||+.++........++..+ ......++.+... -.+..++.+.+|||||||||+||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 160 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLD-EAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVCIA 160 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHH-HHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHHHH
Confidence 279999999998899999998753211100011110 0111222222211 01234567889999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 782 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
||++.+|+++||||||++||+.+.+.+++.+.+. .+++|+|++||+++.+.. ||+|++|++|++++.|+.+++.+
T Consensus 161 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 236 (252)
T PRK14239 161 RVLATSPKIILLDEPTSALDPISAGKIEETLLGL-KDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMFM 236 (252)
T ss_pred HHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHH-hhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999999998655443 457999999999998764 89999999999999999988764
No 466
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=7.8e-35 Score=321.33 Aligned_cols=193 Identities=20% Similarity=0.280 Sum_probs=165.8
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 689999999964 359999999999999999999999999999999999999999999999999875 34567889999
Q ss_pred EcCccccc-cccHhhhcCCC--CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCC
Q 000463 1348 IPQEPVLF-EGTVRSNIDPI--GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1479)
Q Consensus 1348 IpQdp~LF-~gTIR~NLdp~--~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1424 (1479)
+||++.++ ..|+++|+... ....++++.++++..++.+.. |.++ .+||+|||||++||||++++|+
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~~rv~laral~~~p~ 147 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVGITELCRLFSLEHLI-------DYPC----GLLSSGQKRQVALLRLWMSKAK 147 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHHHHHHHHHcCCchhh-------hCCh----hhcCHHHHHHHHHHHHHhcCCC
Confidence 99999886 56999999632 112345677888887775433 2222 3699999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhhcCEEEE
Q 000463 1425 LLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMDCDRVIV 1474 (1479)
Q Consensus 1425 ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~~DrIlV 1474 (1479)
+|||||||++||..+.+.+.+.|++.. +++|+|++||+.+.+.+||.-.+
T Consensus 148 ~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 148 LWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 999999999999999999999999853 57899999999999999997554
No 467
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=329.70 Aligned_cols=203 Identities=25% Similarity=0.337 Sum_probs=165.8
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1479)
.++++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 4789999999953 46999999999999999999999999999999999999999999998762
Q ss_pred -----EEEEeccCcCCC-CcHHHHHhcCC-C---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHH
Q 000463 710 -----TAYVAQTSWIQN-GTIEENILFGL-P---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 779 (1479)
Q Consensus 710 -----iayv~Q~~~i~~-~Tv~enI~fg~-~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 779 (1479)
++|++|++.++. .|++|||.++. . ....... ....+.++.+ |....+.....+||||||||++
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~ 151 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERL--RLKPYADRFPLHLSGGQQQRVA 151 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHH
Confidence 689999998765 69999997431 1 1111111 1112223333 2223456677899999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHH
Q 000463 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALL 856 (1479)
Q Consensus 780 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~ 856 (1479)
||||++.+|+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+++++.
T Consensus 152 laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 229 (242)
T PRK11124 152 IARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFT 229 (242)
T ss_pred HHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhc
Confidence 9999999999999999999999999999987555444458999999999999865 8999999999999999988764
No 468
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.4e-34 Score=329.23 Aligned_cols=208 Identities=22% Similarity=0.331 Sum_probs=168.6
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1479)
.|+++|+++.|++ +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 4789999999952 46999999999999999999999999999999999999999999999872
Q ss_pred EEEEeccCcCCC-CcHHHHHhcCCCCChhhH------HHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHH
Q 000463 710 TAYVAQTSWIQN-GTIEENILFGLPMNRAKY------GEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLAR 782 (1479)
Q Consensus 710 iayv~Q~~~i~~-~Tv~enI~fg~~~~~~~~------~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 782 (1479)
++|++|++.++. .|++||+.++...+...+ ..........+-++.+.. ......+..+|||||||||+|||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~~~~~~~~~~LS~Ge~qrv~lar 156 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGL--ADEADRLAGLLSHGQKQWLEIGM 156 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCC--chhhcCChhhCCHHHHHHHHHHH
Confidence 789999998776 599999988643211000 000011112233444322 23456778899999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 783 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
|++.+|+++||||||++||+.+.+.+++.+.+. .+++|+|++||++++++. ||+|++|++|++++.|+++++..
T Consensus 157 al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 157 LLMQDPKLLLLDEPVAGMTDEETEKTAELLKSL-AGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HHhcCCCEEEecCCccCCCHHHHHHHHHHHHHH-hcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 999999999999999999999999998755544 447999999999999875 99999999999999999888753
No 469
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.3e-35 Score=325.07 Aligned_cols=192 Identities=36% Similarity=0.538 Sum_probs=155.4
Q ss_pred EEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------EEE
Q 000463 646 EVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------TAY 712 (1479)
Q Consensus 646 ~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------iay 712 (1479)
+++|+++.|++. .+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|. ++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 367899999532 246999999999999999999999999999999999999999999999872 699
Q ss_pred EeccCc--CCCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 713 VAQTSW--IQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 713 v~Q~~~--i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
++|++. +++.|++||+.++.. .+....++ + ..+-++.+.. ...+.++..+|||||||||+||||++.+
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~--~---~~~~l~~~~l--~~~~~~~~~~LSgG~~qrv~laral~~~ 152 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE--R---VEEALELVGL--EGLRDRSPFTLSGGQKQRVAIAGVLAMD 152 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH--H---HHHHHHHcCc--HhhhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999983 577899999987532 11111111 1 1122233322 2234567789999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCE
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGM 845 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~ 845 (1479)
|+++||||||++||+.+++.+++.+.+...+|+|+|++||+++++.. ||+|++|++|+
T Consensus 153 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 153 PDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999987665555568999999999999886 99999999985
No 470
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-35 Score=303.22 Aligned_cols=199 Identities=27% Similarity=0.472 Sum_probs=173.3
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|+|+|||+|+.+- +...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcce
Confidence 678899999987 23489999999999999999999999999999999999999999999999999764 5678999999
Q ss_pred EcCccccccc-cHhhhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHh
Q 000463 1348 IPQEPVLFEG-TVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1479)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1419 (1479)
++-+.-++.. |.||||..|+ +.+ ..++.+.-+..++.+... ..++ +||-|+|||++|||||
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~-------rRv~----~~S~G~kqkV~iARAl 148 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLD-------RRVG----EFSTGMKQKVAIARAL 148 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHH-------HHHh----hhchhhHHHHHHHHHH
Confidence 9977667755 9999997654 233 345566666677776654 3343 5899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1420 Lr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~-~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
.++|+|+|||||||+||.-+.+.+++.|++... +++||.-+|-++.++. ||||+++++|+
T Consensus 149 vh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Ge 210 (245)
T COG4555 149 VHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGE 210 (245)
T ss_pred hcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCc
Confidence 999999999999999999999999999998764 8999999999999995 99999999995
No 471
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=330.66 Aligned_cols=205 Identities=29% Similarity=0.388 Sum_probs=164.9
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC----------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG---------- 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g---------- 708 (1479)
.++++|+++.|++ +++++|+||+|++||+++|+|+||||||||+++|+|..++ ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 3 KISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred eEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 5889999999953 4699999999999999999999999999999999998763 699999876
Q ss_pred -----eEEEEeccCcCCCCcHHHHHhcCCCCC----hhhHHHHHHHhchHHHHHhccc--CCccccccCCCccchHHHHH
Q 000463 709 -----TTAYVAQTSWIQNGTIEENILFGLPMN----RAKYGEVVRVCCLEKDLEMMEY--GDQTEIGERGINLSGGQKQR 777 (1479)
Q Consensus 709 -----~iayv~Q~~~i~~~Tv~enI~fg~~~~----~~~~~~v~~~~~l~~dl~~l~~--gd~t~ig~~g~~LSGGQkqR 777 (1479)
.++|++|++.+++.|++||+.++.... .+..++. +.+.++.+.. +.....+..+.+||||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEI-----VEKSLKGAALWDEVKDRLKKSALGLSGGQQQR 154 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHH-----HHHHHHHcCCchhhHHHHhcCCCCCCHHHHHH
Confidence 279999999888899999999864211 1111111 1111222211 01123456788999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHH
Q 000463 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALL 856 (1479)
Q Consensus 778 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~ 856 (1479)
++||||++.+|+++||||||++||+.+++.+.+.+.+. .+++|+|++||+++.+.. +|++++|++|++++.|+.+++.
T Consensus 155 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~-~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 155 LCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQEL-KKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHH-hcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999987655443 458999999999998765 8999999999999999988875
Q ss_pred h
Q 000463 857 N 857 (1479)
Q Consensus 857 ~ 857 (1479)
.
T Consensus 234 ~ 234 (250)
T PRK14240 234 T 234 (250)
T ss_pred h
Confidence 4
No 472
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=6.2e-35 Score=325.87 Aligned_cols=192 Identities=23% Similarity=0.407 Sum_probs=155.9
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----------------
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------------- 708 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------- 708 (1479)
++++|+++.|+. ++++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 689999999942 34799999999999999999999999999999999999999999998876
Q ss_pred eEEEEeccCcCCC-CcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 709 TTAYVAQTSWIQN-GTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 709 ~iayv~Q~~~i~~-~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
.++|++|++.++. .|++||+.++.. .+....++ ...+-++.+...+ .......+||||||||++||||+
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~--~~~~~~~~LS~G~~qrl~la~al 152 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQR-----RVGAALRQVGLEH--KADAFPEQLSGGEQQRVAIARAI 152 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCChh--hhhCChhhCCHHHHHHHHHHHHH
Confidence 2789999998774 799999987532 11111110 1122233332211 23456679999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCE
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGM 845 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~ 845 (1479)
+.+|+++||||||++||+.++..+.+.+.+...+|+|+|++||+++++.. ||++++|++|+
T Consensus 153 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 153 VNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred hCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999987666554568999999999999875 89999999985
No 473
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=7e-35 Score=329.98 Aligned_cols=186 Identities=25% Similarity=0.429 Sum_probs=156.5
Q ss_pred CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEc-Cccccc-cccH
Q 000463 1282 PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIP-QEPVLF-EGTV 1359 (1479)
Q Consensus 1282 ~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIp-Qdp~LF-~gTI 1359 (1479)
.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++++| |++.+| ..|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 4699999999999999999999999999999999999999999999999987653 346788999997 667776 4699
Q ss_pred hhhcCCC---CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCC
Q 000463 1360 RSNIDPI---GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEAT 1432 (1479)
Q Consensus 1360 R~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaT 1432 (1479)
++|+... ...+. +++.++++..++.+.. |+.+ ..||+|||||++|||||+++|+||||||||
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~~~~----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEELL-------DTPV----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-------cCCh----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 9998531 12233 2345566666665433 3333 369999999999999999999999999999
Q ss_pred CCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1433 ASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1433 s~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
++||+++.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|+
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~ 231 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGR 231 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 99999999999999998643 6899999999999876 99999999985
No 474
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.1e-34 Score=332.04 Aligned_cols=203 Identities=27% Similarity=0.370 Sum_probs=166.8
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----------------
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------------- 708 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------- 708 (1479)
|+++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 478999999952 4799999999999999999999999999999999999999999998876
Q ss_pred ----------eEEEEeccCcCC-CCcHHHHHhcCCC----CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchH
Q 000463 709 ----------TTAYVAQTSWIQ-NGTIEENILFGLP----MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGG 773 (1479)
Q Consensus 709 ----------~iayv~Q~~~i~-~~Tv~enI~fg~~----~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGG 773 (1479)
.++|++|++.++ ..|++||+.++.. .+....++ ...+.++.+.. .....+.+.+||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl--~~~~~~~~~~LS~G 150 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEK-----RAMELLDMVGL--ADKADHMPAQLSGG 150 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCC--hhHhhcChhhcCHH
Confidence 278999998776 5799999987521 11111111 11223333322 23355677899999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCcccc-cCCEEEEEeCCEEEEecC
Q 000463 774 QKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGR 851 (1479)
Q Consensus 774 QkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~ 851 (1479)
||||++||||++.+|+++||||||++||+.+.+.+++.+.+...+ |+|+|++||+++++. .+|++++|++|++++.|+
T Consensus 151 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 230 (252)
T TIGR03005 151 QQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGK 230 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999998766555444 899999999999986 489999999999999999
Q ss_pred hHHHHh
Q 000463 852 YNALLN 857 (1479)
Q Consensus 852 ~~~l~~ 857 (1479)
++++.+
T Consensus 231 ~~~~~~ 236 (252)
T TIGR03005 231 PDEIFR 236 (252)
T ss_pred HHHHhc
Confidence 888764
No 475
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=8.1e-35 Score=313.60 Aligned_cols=160 Identities=36% Similarity=0.566 Sum_probs=146.4
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TTA 711 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ia 711 (1479)
++++|++++|++. .+++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4689999999642 34699999999999999999999999999999999999999999999987 379
Q ss_pred EEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEE
Q 000463 712 YVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIY 791 (1479)
Q Consensus 712 yv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~il 791 (1479)
|++|++++++.|++||+ ||||||||++||||++.+|+++
T Consensus 80 ~~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~l 118 (173)
T cd03246 80 YLPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRIL 118 (173)
T ss_pred EECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 99999998888999998 9999999999999999999999
Q ss_pred EEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccccCCEEEEEeCCEE
Q 000463 792 LLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMI 846 (1479)
Q Consensus 792 lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~~D~i~~l~~G~i 846 (1479)
||||||++||+++++.+.+.+.+...+|+|+|++||+++++..||++++|++|++
T Consensus 119 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 119 VLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 9999999999999999987665554568999999999998888999999999974
No 476
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=330.21 Aligned_cols=205 Identities=28% Similarity=0.399 Sum_probs=166.6
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccC-----CcEEEECC----------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKI-----SGKVKVCG---------- 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~-----~G~i~~~g---------- 708 (1479)
.++++|+++.|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|+ +|+|.++|
T Consensus 4 ~l~~~~l~~~~~---~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYH---KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEEC---CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 588999999995 246999999999999999999999999999999999999987 69998765
Q ss_pred -----eEEEEeccCcCCCCcHHHHHhcCCCCC----hhhHHHHHHHhchHHHHHhccc--CCccccccCCCccchHHHHH
Q 000463 709 -----TTAYVAQTSWIQNGTIEENILFGLPMN----RAKYGEVVRVCCLEKDLEMMEY--GDQTEIGERGINLSGGQKQR 777 (1479)
Q Consensus 709 -----~iayv~Q~~~i~~~Tv~enI~fg~~~~----~~~~~~v~~~~~l~~dl~~l~~--gd~t~ig~~g~~LSGGQkqR 777 (1479)
.++|++|++.+++.|++||+.++.... ++..++.+ .+.++.+.. ......+..+.+||||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qr 155 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVV-----EKSLRQAALWDEVKDNLHKSGLALSGGQQQR 155 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHH-----HHHHHHhCCchhhhhHhhCCcccCCHHHHHH
Confidence 389999999988889999999864321 11111111 111121111 11123467788999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHH
Q 000463 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALL 856 (1479)
Q Consensus 778 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~ 856 (1479)
|+||||++.+|+++||||||++||+.+...+.+.+.+ +.+++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~-~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 156 LCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQE-LKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHH-HhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 9999999999999999999999999999988765444 3468999999999999876 7999999999999999988875
Q ss_pred h
Q 000463 857 N 857 (1479)
Q Consensus 857 ~ 857 (1479)
.
T Consensus 235 ~ 235 (251)
T PRK14249 235 S 235 (251)
T ss_pred h
Confidence 4
No 477
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-34 Score=322.41 Aligned_cols=197 Identities=28% Similarity=0.393 Sum_probs=155.9
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EEEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TAYV 713 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------iayv 713 (1479)
|+++|++++|++ +. .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 75 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSML 75 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEE
Confidence 468999999952 22 3999999999999999999999999999999999999999999883 7999
Q ss_pred eccCcCCC-CcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEE
Q 000463 714 AQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYL 792 (1479)
Q Consensus 714 ~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ill 792 (1479)
+|++.++. .|++||+.++........++.. ....+-++.+.. .........+||||||||++||||++.+|+++|
T Consensus 76 ~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~--~~~~~~l~~~~l--~~~~~~~~~~LS~G~~qrv~ia~al~~~p~lll 151 (211)
T cd03298 76 FQENNLFAHLTVEQNVGLGLSPGLKLTAEDR--QAIEVALARVGL--AGLEKRLPGELSGGERQRVALARVLVRDKPVLL 151 (211)
T ss_pred ecccccCCCCcHHHHHhcccccccCccHHHH--HHHHHHHHHcCC--HHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99998875 5999999876431100000000 011122222221 122345667999999999999999999999999
Q ss_pred EeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEEec
Q 000463 793 LDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1479)
Q Consensus 793 LDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1479)
|||||++||+++++.+.+.+.+... +|+|+|++||+++++.. ||++++|++|++++.|
T Consensus 152 lDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 152 LDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999876655444 48999999999999876 8999999999998654
No 478
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.1e-34 Score=332.11 Aligned_cols=201 Identities=24% Similarity=0.264 Sum_probs=170.0
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcc--CCCCccEEEEcCEecCCCChhhhhc-
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRL--VEPSGGRIIIDGIDISLLGLHDLRS- 1343 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl--~~p~~G~I~IDG~dI~~i~l~~LR~- 1343 (1479)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++...+.+..++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 4899999999964 3599999999999999999999999999999999998 6899999999999999888766554
Q ss_pred ceEEEcCccccccc-cHhhhcCCC-C---------CCC----HHHHHHHHHHcCchH-HHHhCcCCccccccCCCCCCCc
Q 000463 1344 RFGIIPQEPVLFEG-TVRSNIDPI-G---------QYS----DEEIWKSLERCQLKD-VVAAKPDKLDSLVADSGDNWSV 1407 (1479)
Q Consensus 1344 ~i~iIpQdp~LF~g-TIR~NLdp~-~---------~~s----d~eI~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLSg 1407 (1479)
.++++||+|.+|.+ |+++|+... . +.+ .+++.++++.+++.+ ... ..+. ..|||
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~---~~LSg 154 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLS-------RNVN---EGFSG 154 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhc-------cccc---cCCCH
Confidence 58999999999987 889987421 1 011 234567788877752 322 2221 24999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhh--cCEEEEEeCCC
Q 000463 1408 GQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD--CDRVIVVDAGL 1479 (1479)
Q Consensus 1408 GQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~--~DrIlVL~~G~ 1479 (1479)
|||||++|||||+++|+||||||||++||.++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|+
T Consensus 155 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~ 229 (252)
T CHL00131 155 GEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGK 229 (252)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCE
Confidence 99999999999999999999999999999999999999999865 47999999999999876 89999999985
No 479
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.6e-34 Score=324.41 Aligned_cols=197 Identities=22% Similarity=0.363 Sum_probs=158.3
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe---------------
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------- 709 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------- 709 (1479)
++++|+++.|+. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 689999999942 347999999999999999999999999999999999999999999998772
Q ss_pred -EEEEeccCcC-CCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcC
Q 000463 710 -TAYVAQTSWI-QNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1479)
Q Consensus 710 -iayv~Q~~~i-~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 787 (1479)
++|++|++.+ ++.|++||+.++........++..+. ..+-++.+... ........+||||||||++||||++.+
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~--~~~~l~~~~l~--~~~~~~~~~LS~G~~qrv~laral~~~ 155 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRR--VSAALDKVGLL--DKAKNFPIQLSGGEQQRVGIARAVVNK 155 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHH--HHHHHHHcCCh--hhhhCCchhCCHHHHHHHHHHHHHHcC
Confidence 6899999876 57899999988632111111111111 11223333221 123456789999999999999999999
Q ss_pred CCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEE
Q 000463 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIV 847 (1479)
Q Consensus 788 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~ 847 (1479)
|+++||||||++||+.+.+.+.+.+.+...+++|+|++||+++++.. ||+|++|++|+++
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 156 PAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEc
Confidence 99999999999999999999987655544568999999999999876 8999999999986
No 480
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.4e-34 Score=331.84 Aligned_cols=206 Identities=24% Similarity=0.357 Sum_probs=166.8
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eEE
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TTA 711 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ia 711 (1479)
++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .++
T Consensus 2 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAG---GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEEC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 67899999995 34799999999999999999999999999999999999999999999987 279
Q ss_pred EEeccCc-CCCCcHHHHHhcCCC-CChh---hHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhc
Q 000463 712 YVAQTSW-IQNGTIEENILFGLP-MNRA---KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQ 786 (1479)
Q Consensus 712 yv~Q~~~-i~~~Tv~enI~fg~~-~~~~---~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~ 786 (1479)
|++|++. .+..|++||+.++.. .... ...+ ....+.+.++.++.. .....++.+||||||||++||||++.
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~l~--~~~~~~~~~LS~G~~qrl~la~al~~ 154 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPH--DAAVVDRALARTELS--HLADRDMSTLSGGERQRVHVARALAQ 154 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHH--HHHHHHHHHHHcCcH--hhhcCCcccCCHHHHHHHHHHHHHhc
Confidence 9999985 456899999988632 1000 0000 011122233333222 23456778999999999999999999
Q ss_pred CCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000463 787 DCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 787 ~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+|+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 155 EPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 99999999999999999999988765554445899999999999996 599999999999999999888753
No 481
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=309.64 Aligned_cols=201 Identities=27% Similarity=0.472 Sum_probs=171.6
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhh-hcce
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL-RSRF 1345 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~i 1345 (1479)
-++++|++..|.. -.+|+||||++++||.++++||||+|||||+++|+|+.+|.+|+|.++|.||+..+.|+. |..|
T Consensus 3 mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 3789999999975 459999999999999999999999999999999999999999999999999999999984 7789
Q ss_pred EEEcCccccccc-cHhhhcCCCCC------CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHH
Q 000463 1346 GIIPQEPVLFEG-TVRSNIDPIGQ------YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1479)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~~------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1418 (1479)
++|||...+|.. ||.|||..... ..+..+.++.+.. | .|.......+.+|||||+|.+++|||
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~~~e~v~~lF---------P-~Lker~~~~aG~LSGGEQQMLAiaRA 150 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQERDLEEVYELF---------P-RLKERRNQRAGTLSGGEQQMLAIARA 150 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccccccccccHHHHHHHC---------h-hHHHHhcCcccCCChHHHHHHHHHHH
Confidence 999999999976 99999974211 1111133333332 2 23333344567899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1419 LLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
|..+||+|+|||||.+|-|.--+.|.++|++..+ +-||+.|-++.....+ +||.+||++|+
T Consensus 151 Lm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Gr 214 (237)
T COG0410 151 LMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGR 214 (237)
T ss_pred HhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCE
Confidence 9999999999999999999999999999999874 4599999999999876 99999999996
No 482
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=331.62 Aligned_cols=204 Identities=27% Similarity=0.391 Sum_probs=165.1
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC-----------
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG----------- 708 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g----------- 708 (1479)
-+++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 6 ~~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYG---SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEEC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 36889999995 3579999999999999999999999999999999999986 4799999876
Q ss_pred ----eEEEEeccCcCCCCcHHHHHhcCCCC-----ChhhHHHHHHHhchHHHHHhcccCC--ccccccCCCccchHHHHH
Q 000463 709 ----TTAYVAQTSWIQNGTIEENILFGLPM-----NRAKYGEVVRVCCLEKDLEMMEYGD--QTEIGERGINLSGGQKQR 777 (1479)
Q Consensus 709 ----~iayv~Q~~~i~~~Tv~enI~fg~~~-----~~~~~~~v~~~~~l~~dl~~l~~gd--~t~ig~~g~~LSGGQkqR 777 (1479)
.++|++|++.++..|++||+.++... +....++. ..+.++.+...+ .+.++..+.+||||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr 157 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEI-----VEKSLTSVGLWEELGDRLKDSAFELSGGQQQR 157 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHH-----HHHHHHHcCCCchhhhHhhcChhhCCHHHHHH
Confidence 27899999988888999999876321 11111111 112233332211 123456788999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHH
Q 000463 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALL 856 (1479)
Q Consensus 778 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~ 856 (1479)
++||||++.+|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++++.. ||++++|++|++++.|+.+++.
T Consensus 158 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~-~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 158 LCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQEL-KKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHH-hcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999887655444 468999999999999875 8999999999999999988876
Q ss_pred h
Q 000463 857 N 857 (1479)
Q Consensus 857 ~ 857 (1479)
+
T Consensus 237 ~ 237 (251)
T PRK14244 237 K 237 (251)
T ss_pred c
Confidence 4
No 483
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=330.47 Aligned_cols=204 Identities=25% Similarity=0.355 Sum_probs=166.9
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC---------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG--------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g--------- 708 (1479)
..++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|..+| ++|+|.++|
T Consensus 3 ~~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 79 (251)
T PRK14270 3 IKMESKNLNLWYG---EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVD 79 (251)
T ss_pred cEEEEEEeEEEEC---CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEeccccccc
Confidence 3588999999995 24699999999999999999999999999999999999875 799999876
Q ss_pred ------eEEEEeccCcCCCCcHHHHHhcCCCC----Chhh----HHHHHHHhchHHHHHhcccCCccccccCCCccchHH
Q 000463 709 ------TTAYVAQTSWIQNGTIEENILFGLPM----NRAK----YGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQ 774 (1479)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~~----~~~~----~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 774 (1479)
.++|++|++.++..|++||+.|+... +... ..+.++.+++..++ ....+.++.+|||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~ 152 (251)
T PRK14270 80 VVELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEV-------KDDLKKSALKLSGGQ 152 (251)
T ss_pred HHHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhh-------hhHhhCCcccCCHHH
Confidence 27999999998889999999886321 1111 11222222221111 122456788999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChH
Q 000463 775 KQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYN 853 (1479)
Q Consensus 775 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~ 853 (1479)
|||++||||++.+|+++||||||++||+.+++.+.+.+.+. .+++|+|++||+++.+.. ||++++|++|++++.|+.+
T Consensus 153 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~-~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~ 231 (251)
T PRK14270 153 QQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVEL-KKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTE 231 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-HhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHH
Confidence 99999999999999999999999999999999998655443 446999999999999875 8999999999999999998
Q ss_pred HHHh
Q 000463 854 ALLN 857 (1479)
Q Consensus 854 ~l~~ 857 (1479)
++..
T Consensus 232 ~~~~ 235 (251)
T PRK14270 232 KIFL 235 (251)
T ss_pred HHhc
Confidence 8764
No 484
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.7e-34 Score=338.10 Aligned_cols=206 Identities=25% Similarity=0.355 Sum_probs=168.5
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eEE
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TTA 711 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~ia 711 (1479)
.++++|++++|+ ++.+|+|+||++++||+++|+||||||||||+++|+|..+|++|+|.++| .+|
T Consensus 2 ~l~~~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig 78 (301)
T TIGR03522 2 SIRVSSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceE
Confidence 378999999995 35699999999999999999999999999999999999999999999988 379
Q ss_pred EEeccCcCCC-CcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCE
Q 000463 712 YVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1479)
Q Consensus 712 yv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 790 (1479)
|+||++.++. .|++||+.+.........++..+ ..++.++.+. .......+..+||||||||++||||++.+|++
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~--~~~~~l~~~g--l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 154 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ--RVEEMIELVG--LRPEQHKKIGQLSKGYRQRVGLAQALIHDPKV 154 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHCC--CchHhcCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999998875 59999997632211000011111 1123334432 22334567889999999999999999999999
Q ss_pred EEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 791 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
++|||||++||+.+.+.+++.+.+ ..+++|+|++||+++++.. ||+|++|++|+++..|+.+++..
T Consensus 155 liLDEPt~gLD~~~~~~l~~~l~~-~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 155 LILDEPTTGLDPNQLVEIRNVIKN-IGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHH-hcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 999999999999999999876554 4458999999999999876 99999999999999999998864
No 485
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=4.1e-31 Score=320.81 Aligned_cols=442 Identities=19% Similarity=0.226 Sum_probs=309.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhccCCH-----HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000463 389 FNFNSQKLGMLIRCTLITSLYRKGLRLSCSARQAHGV-----GQIVNYMAVDAQQLSDMMLQLHAV-WLMPLQISVALIL 462 (1479)
Q Consensus 389 ~~~~~~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~-----G~ivnlms~D~~ri~~~~~~~~~~-w~~plqi~lal~l 462 (1479)
..|..+++.++.|.-|+..+.+|=|.-....+-.... -..=+.++-|+..+.+....+-.- .-..++++.-..+
T Consensus 106 ~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~i 185 (604)
T COG4178 106 QTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGI 185 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4556779999999999999999998877544422221 223358888888887765444332 2233344444456
Q ss_pred HHHHHHHHH---------HHHHH--HHHHHHHHHHHHHHHHH----HHHH-HHHHHHHHHHHHHHHHHhHHHHHHHhchH
Q 000463 463 LYNCLGASV---------ITTVV--GIIGVMIFVVMGTKRNN----RFQF-NVMKNRDSRMKATNEMLNYMRVIKFQAWE 526 (1479)
Q Consensus 463 L~~~lG~s~---------l~gl~--~~il~~~~~~~~~~~~~----~~q~-~~m~~~D~R~~~~sEiL~~Ik~IKl~~wE 526 (1479)
||...|.-+ +.|.. ++++.+++...++-+.+ +... +....-|-|- ....+.++...|-+|+-|
T Consensus 186 Lw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~-~Lvrv~enaE~IAly~GE 264 (604)
T COG4178 186 LWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRY-SLVRVRENAEAIALYRGE 264 (604)
T ss_pred HHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHH-HHHHHHhhHHHHHHhcCc
Confidence 775555221 12211 22223333333332222 2211 1122233343 344677888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHH
Q 000463 527 DHFNKRILSFRESEFGWLTKFMY----SISGNIIVMWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNF 602 (1479)
Q Consensus 527 ~~f~~~I~~~R~~El~~l~k~~~----~~a~~~~~~~~~p~~v~~~tF~~~~l~~~~Lt~~~vFt~lalf~iL~~pl~~l 602 (1479)
+.-++++.+.=..=++..++... +..++....++++++-.++... .++.+.++.+....+-..|+.+...+..+
T Consensus 265 ~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap--~~f~g~i~~G~lmqa~~aF~~v~sslswf 342 (604)
T COG4178 265 KVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAP--RYFSGQITFGGLMQAVGAFGQVHSSLSWF 342 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccH--hhhcCcChHHHHHHHHHHHHHHHHHHHHH
Confidence 88777765533333332222211 1112222223333211111122 23577899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccc---CcccccccccC------CCCCccEEEEeeEEEecCCCCcccceeeeEEEeCC
Q 000463 603 PQSMISLSQAMISLARLDKYMLSRE---LVNESVERVEG------CDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKG 673 (1479)
Q Consensus 603 p~~i~~~~~a~vS~~RI~~fL~~~e---~~~~~~~~~~~------~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G 673 (1479)
-..+..+.+=++++.|+.+|-.+=| .++. ....+. +..+..|+++|++..-+. +.+.+++.||++++|
T Consensus 343 i~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~--~~~ll~~l~~~v~~G 419 (604)
T COG4178 343 IDNYDAIADWRATLLRLAEFRQALEAAQMDTE-KPARTGRRIDFDDNADHGITLENLSLRTPD--GQTLLSELNFEVRPG 419 (604)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhccCccc-ccCcccccccccccccceeEEeeeeEECCC--CCeeeccceeeeCCC
Confidence 9999999999999999999986422 1110 000000 111578999999998764 347899999999999
Q ss_pred cEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--eEEEEeccCcCCCCcHHHHHhcCCC---CChhhHHHHHHHhch
Q 000463 674 DLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--TTAYVAQTSWIQNGTIEENILFGLP---MNRAKYGEVVRVCCL 748 (1479)
Q Consensus 674 ~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~iayv~Q~~~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l 748 (1479)
|.+.|.|+||||||||+++|+|.-|--+|+|.... .+-|+||.|.++.||.||-|++... ++.+...+++..|+|
T Consensus 420 ~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL 499 (604)
T COG4178 420 ERLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGL 499 (604)
T ss_pred CEEEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCc
Confidence 99999999999999999999999999999999874 3799999999999999999999754 456778889999999
Q ss_pred HHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccC
Q 000463 749 EKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQ 828 (1479)
Q Consensus 749 ~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~ 828 (1479)
.+-.+.++.-+. -...||||||||+++||.++++|++++|||.|||||+.+...+++. ++..+.+.|+|-|.|+
T Consensus 500 ~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~-l~~~lp~~tvISV~Hr 573 (604)
T COG4178 500 GDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQL-LKEELPDATVISVGHR 573 (604)
T ss_pred HHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHH-HHhhCCCCEEEEeccc
Confidence 988887765443 3457999999999999999999999999999999999999999864 4556689999999999
Q ss_pred CcccccCCEEEEEe
Q 000463 829 VDFLHNVDLILVMR 842 (1479)
Q Consensus 829 ~~~l~~~D~i~~l~ 842 (1479)
.......++.+.+.
T Consensus 574 ~tl~~~h~~~l~l~ 587 (604)
T COG4178 574 PTLWNFHSRQLELL 587 (604)
T ss_pred hhhHHHHhhheeec
Confidence 88877666655554
No 486
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.6e-34 Score=320.51 Aligned_cols=192 Identities=23% Similarity=0.333 Sum_probs=167.3
Q ss_pred EEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEE
Q 000463 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1479)
Q Consensus 1268 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1479)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. . ..|+++++
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~-~~~~~~~~ 77 (207)
T PRK13539 3 LEGEDLACVRGG--RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--P-DVAEACHY 77 (207)
T ss_pred EEEEeEEEEECC--eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--h-hhHhhcEE
Confidence 789999999964 359999999999999999999999999999999999999999999999998753 2 27889999
Q ss_pred EcCccccc-cccHhhhcCCC---CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCC
Q 000463 1348 IPQEPVLF-EGTVRSNIDPI---GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1479)
Q Consensus 1348 IpQdp~LF-~gTIR~NLdp~---~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1423 (1479)
++|++.++ ..|+++|+... ....++++.++++..++.+.....+ .+||||||||++||||++++|
T Consensus 78 ~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~la~al~~~p 146 (207)
T PRK13539 78 LGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLAPLAHLPF-----------GYLSAGQKRRVALARLLVSNR 146 (207)
T ss_pred ecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHcCCh-----------hhcCHHHHHHHHHHHHHhcCC
Confidence 99988765 67999998532 2234667899999999976433222 369999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCcEEEEEccChhhhhhcCEEEEEe
Q 000463 1424 RLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMDCDRVIVVD 1476 (1479)
Q Consensus 1424 ~ILiLDEaTs~lD~~Te~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL~ 1476 (1479)
++|+|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. |+++.++
T Consensus 147 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~ 199 (207)
T PRK13539 147 PIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLG 199 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeec
Confidence 9999999999999999999999998753 57899999999999988 9998875
No 487
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=340.36 Aligned_cols=210 Identities=20% Similarity=0.290 Sum_probs=168.9
Q ss_pred ccEEEEeeEEEecCCC-------CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------
Q 000463 643 IAVEVRDGVFSWDDEN-------GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~-------~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------- 708 (1479)
..++++|++++|+... ..++|+||||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~ 83 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKAD 83 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCC
Confidence 4689999999996321 24689999999999999999999999999999999999999999999887
Q ss_pred ---------eEEEEeccCc--C-CCCcHHHHHhcCCC----CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccch
Q 000463 709 ---------TTAYVAQTSW--I-QNGTIEENILFGLP----MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSG 772 (1479)
Q Consensus 709 ---------~iayv~Q~~~--i-~~~Tv~enI~fg~~----~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSG 772 (1479)
.++|++|+|. + +..|+.+|+..+.. .+.....+ + ..+-++.+...+ ......+.+|||
T Consensus 84 ~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~--~---~~~~l~~~gL~~-~~~~~~p~~LSg 157 (327)
T PRK11308 84 PEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERRE--K---ALAMMAKVGLRP-EHYDRYPHMFSG 157 (327)
T ss_pred HHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHH--H---HHHHHHHCCCCh-HHhcCCCccCCH
Confidence 3799999983 3 45699999864321 12111111 1 112233332211 123567889999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEeCCEEEEec
Q 000463 773 GQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1479)
Q Consensus 773 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1479)
||||||+|||||+.+|+++|+||||++||+.+++++++.+.+... .|.|+|+||||++.+.. ||+|++|++|+|++.|
T Consensus 158 Gq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g 237 (327)
T PRK11308 158 GQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKG 237 (327)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999999986665544 48999999999999975 9999999999999999
Q ss_pred ChHHHHhc
Q 000463 851 RYNALLNS 858 (1479)
Q Consensus 851 ~~~~l~~~ 858 (1479)
+.+++.+.
T Consensus 238 ~~~~~~~~ 245 (327)
T PRK11308 238 TKEQIFNN 245 (327)
T ss_pred CHHHHhcC
Confidence 99998864
No 488
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-35 Score=320.74 Aligned_cols=198 Identities=28% Similarity=0.441 Sum_probs=173.8
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCE---ecCCCChhhhhc
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI---DISLLGLHDLRS 1343 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~---dI~~i~l~~LR~ 1343 (1479)
.|+++|++..|+. ..+++|||++|+.||.+|+.||||||||||+++|.|+..|++|+|.+||. |.+++ +.-.+
T Consensus 2 ~i~i~~~~~~~~~--~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~--~~~~R 77 (345)
T COG1118 2 SIRINNVKKRFGA--FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNL--AVRDR 77 (345)
T ss_pred ceeehhhhhhccc--ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhcc--chhhc
Confidence 3778888888864 35899999999999999999999999999999999999999999999999 87773 33346
Q ss_pred ceEEEcCcccccc-ccHhhhcCCCC---------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHH
Q 000463 1344 RFGIIPQEPVLFE-GTVRSNIDPIG---------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1479)
Q Consensus 1344 ~i~iIpQdp~LF~-gTIR~NLdp~~---------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1413 (1479)
+||+|.||.-||. -||++||...- ...+.++.+.|+.++|...-...|. .||||||||+
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP~-----------QLSGGQrQRV 146 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYPA-----------QLSGGQRQRV 146 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCch-----------hcChHHHHHH
Confidence 7999999999885 49999997432 1235667888999999888877775 4699999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1414 ~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
+|||||.-.|++|+||||.++||..-.+.+++-|++.. -++|++.|||+.+.+.. ||||+||++|+
T Consensus 147 ALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~ 215 (345)
T COG1118 147 ALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGR 215 (345)
T ss_pred HHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCe
Confidence 99999999999999999999999999999999998865 37999999999999877 99999999995
No 489
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=8.3e-35 Score=341.02 Aligned_cols=194 Identities=23% Similarity=0.343 Sum_probs=157.8
Q ss_pred cccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eEEEEeccCcCCC-CcHHH
Q 000463 660 EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TTAYVAQTSWIQN-GTIEE 726 (1479)
Q Consensus 660 ~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~iayv~Q~~~i~~-~Tv~e 726 (1479)
+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|+||++.++. .|++|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e 85 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGRE 85 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHH
Confidence 4799999999999999999999999999999999999999999999988 2799999987764 59999
Q ss_pred HHhcCCCCChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHH
Q 000463 727 NILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGS 806 (1479)
Q Consensus 727 nI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~ 806 (1479)
|+.+..........+..+ ...+-++.+... .....+..+||||||||++||||++++|+++||||||++||+.+++
T Consensus 86 ~l~~~~~~~~~~~~~~~~--~~~~~l~~~~l~--~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~ 161 (302)
T TIGR01188 86 NLEMMGRLYGLPKDEAEE--RAEELLELFELG--EAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRR 161 (302)
T ss_pred HHHHHHHHcCCCHHHHHH--HHHHHHHHcCCh--hHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHH
Confidence 998742211000011000 112223333222 1234567899999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 807 DIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 807 ~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
.+++.+.+...+|+|+|++||+++++.. ||+|++|++|+++..|+++++.+
T Consensus 162 ~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 162 AIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKR 213 (302)
T ss_pred HHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHH
Confidence 9987665555568999999999999875 99999999999999999988764
No 490
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=334.39 Aligned_cols=204 Identities=31% Similarity=0.485 Sum_probs=166.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe---------------
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------- 709 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------- 709 (1479)
++++|++++|+. ..++++|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 689999999952 246999999999999999999999999999999999999999999998872
Q ss_pred EEEEeccC--cCCCCcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHH
Q 000463 710 TAYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1479)
Q Consensus 710 iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 784 (1479)
++|++|++ .+++.|++|||.++.. .......+ + ..+-++.+... ......+.+||||||||++||||+
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~--~---~~~~l~~~~L~--~~~~~~~~~LS~Gq~qrv~laral 152 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEK--R---VKEALKAVGME--GFENKPPHHLSGGQKKRVAIAGIL 152 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH--H---HHHHHHHCCCc--hhhcCChhhCCHHHHHHHHHHHHH
Confidence 68999997 5677899999987632 11111111 1 11222222221 123456789999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000463 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 785 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+.+|+++||||||++||+.+++.+.+.+.+...+|+|+|++||+++++. .||++++|++|++++.|+++++..
T Consensus 153 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 153 AMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999998766555446899999999999987 499999999999999999988764
No 491
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=329.40 Aligned_cols=205 Identities=26% Similarity=0.381 Sum_probs=165.8
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECCe---------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCGT--------- 709 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g~--------- 709 (1479)
.++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYG---NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 589999999995 2479999999999999999999999999999999999987 47999988762
Q ss_pred ------EEEEeccCcCCCCcHHHHHhcCCCCC----hhhHHHHHHHhchHHHHHhcccC--CccccccCCCccchHHHHH
Q 000463 710 ------TAYVAQTSWIQNGTIEENILFGLPMN----RAKYGEVVRVCCLEKDLEMMEYG--DQTEIGERGINLSGGQKQR 777 (1479)
Q Consensus 710 ------iayv~Q~~~i~~~Tv~enI~fg~~~~----~~~~~~v~~~~~l~~dl~~l~~g--d~t~ig~~g~~LSGGQkqR 777 (1479)
++|++|++.+++.|++||+.++.... ++..++. ..+-++.+... .....+.++.+||||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr 155 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQR-----VEESLKQAAIWKETKDNLDRNAQAFSGGQQQR 155 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHH-----HHHHHHHcCCCcchHHHhccChhhCCHHHHHH
Confidence 78999999988899999998764211 1111111 11112221110 0122356778999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHH
Q 000463 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALL 856 (1479)
Q Consensus 778 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~ 856 (1479)
++||||++++|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++++.. ||+|++|++|++++.|+.+++.
T Consensus 156 ~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~-~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 156 ICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMEL-KHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHH-HcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999888655544 457999999999999765 8999999999999999988875
Q ss_pred h
Q 000463 857 N 857 (1479)
Q Consensus 857 ~ 857 (1479)
.
T Consensus 235 ~ 235 (251)
T PRK14251 235 I 235 (251)
T ss_pred h
Confidence 4
No 492
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.2e-34 Score=326.86 Aligned_cols=179 Identities=26% Similarity=0.442 Sum_probs=154.8
Q ss_pred eeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEecCCCChhhhhcceEEEcCcccccc-ccHhhhc
Q 000463 1285 LKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFE-GTVRSNI 1363 (1479)
Q Consensus 1285 L~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~-gTIR~NL 1363 (1479)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+++||+|.+|. .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 589999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CCC-----CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCchHHHHHHHHHHhccCCCEEEEeCCCCC
Q 000463 1364 DPI-----GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATAS 1434 (1479)
Q Consensus 1364 dp~-----~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTs~ 1434 (1479)
... ...++ +++.+++++.++.+..... ...||||||||++|||||+++|++|||||||++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 144 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRAIVEEHIALVGLTEAADKR-----------PGQLSGGMKQRVAIARALSIRPKVLLLDEPFGA 144 (230)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcCC-----------hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 531 22332 3467778888886654333 246899999999999999999999999999999
Q ss_pred CCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1435 VDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1435 lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|+
T Consensus 145 LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~ 192 (230)
T TIGR01184 145 LDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGP 192 (230)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCc
Confidence 999999999999988643 7899999999999876 99999999985
No 493
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1.7e-34 Score=330.73 Aligned_cols=201 Identities=24% Similarity=0.400 Sum_probs=166.8
Q ss_pred cEEEEeeeeeecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccCCCCccEEEEcCEe-----cCCCChhh-
Q 000463 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGID-----ISLLGLHD- 1340 (1479)
Q Consensus 1267 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~d-----I~~i~l~~- 1340 (1479)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +...+..+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGG--GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCC--ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 4899999999964 348999999999999999999999999999999999999999999999988 77666543
Q ss_pred ---hhcceEEEcCccc--c-ccccHhhhcC----CCCC----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCC
Q 000463 1341 ---LRSRFGIIPQEPV--L-FEGTVRSNID----PIGQ----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWS 1406 (1479)
Q Consensus 1341 ---LR~~i~iIpQdp~--L-F~gTIR~NLd----p~~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1406 (1479)
++++++++||+|. + +..|+.+|+. .+.. ..++++.+.++..++.+ +.......+||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----------~~~~~~~~~LS 150 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDP----------TRIDDLPRAFS 150 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCCh----------hhhhcCchhcC
Confidence 3467999999985 2 3458888873 1111 12345666666666642 12233455799
Q ss_pred chHHHHHHHHHHhccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CcEEEEEccChhhhhh-cCEEEEEeCCC
Q 000463 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGL 1479 (1479)
Q Consensus 1407 gGQrQrl~LARALLr~~~ILiLDEaTs~lD~~Te~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1479)
||||||++|||||+++|++|+|||||++||+.+.+.+.+.|++..+ +.|+|+|+|+++.+.. ||++++|++|+
T Consensus 151 gG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~ 226 (253)
T TIGR02323 151 GGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGR 226 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 9999999999999999999999999999999999999999988643 7899999999999986 99999999985
No 494
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.8e-34 Score=324.10 Aligned_cols=196 Identities=22% Similarity=0.323 Sum_probs=161.9
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------eEEEEec
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------TTAYVAQ 715 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------~iayv~Q 715 (1479)
++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .++|++|
T Consensus 1 l~l~~v~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q 77 (223)
T TIGR03740 1 LETKNLSKRFG---KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIE 77 (223)
T ss_pred CEEEeEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcC
Confidence 46899999995 35799999999999999999999999999999999999999999999987 3789999
Q ss_pred cCcCCC-CcHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEE
Q 000463 716 TSWIQN-GTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIY 791 (1479)
Q Consensus 716 ~~~i~~-~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~il 791 (1479)
++.++. .|++||+.++.. .++.+..+.++..++. .....+..+||||||||++||||++.+|+++
T Consensus 78 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~~rv~laral~~~p~ll 146 (223)
T TIGR03740 78 SPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLT-----------NTGKKKAKQFSLGMKQRLGIAIALLNHPKLL 146 (223)
T ss_pred CCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCc-----------HHHhhhHhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 987664 799999986432 1222222222222222 1234566789999999999999999999999
Q ss_pred EEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHH
Q 000463 792 LLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNA 854 (1479)
Q Consensus 792 lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~ 854 (1479)
||||||++||+.+.+.+.+.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+.++
T Consensus 147 llDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 147 ILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred EECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999987665554568999999999999865 99999999999999888653
No 495
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=332.31 Aligned_cols=211 Identities=29% Similarity=0.405 Sum_probs=167.6
Q ss_pred CccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC--------
Q 000463 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG-------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g-------- 708 (1479)
...++++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|..+ |++|+|.++|
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 457999999999952 469999999999999999999999999999999999987 4899998876
Q ss_pred -------eEEEEeccCcCCCCcHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCC--ccccccCCCccchHHHHHHH
Q 000463 709 -------TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGD--QTEIGERGINLSGGQKQRIQ 779 (1479)
Q Consensus 709 -------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd--~t~ig~~g~~LSGGQkqRv~ 779 (1479)
.++|++|++.+++.|++||+.++........++..+ ....+-++.+...+ .+..++++.+|||||||||+
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~ 178 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLD-EAVERSLRGAALWDEVKDRLHENAFGLSGGQQQRLV 178 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHH-HHHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHHH
Confidence 378999999988889999998763211100111000 00111122221111 12456778899999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 780 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
||||++.+|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++++.. ||++++|++|++++.|+++++..
T Consensus 179 laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~-~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 256 (272)
T PRK14236 179 IARAIAIEPEVLLLDEPTSALDPISTLKIEELITEL-KSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTLFT 256 (272)
T ss_pred HHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHH-HhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHHhc
Confidence 999999999999999999999999999887655544 357899999999999764 89999999999999999888754
No 496
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=330.75 Aligned_cols=206 Identities=24% Similarity=0.383 Sum_probs=165.1
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccC---CcEEEECC------------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKI---SGKVKVCG------------ 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~---~G~i~~~g------------ 708 (1479)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|
T Consensus 4 ~l~~~nl~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFN---QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeC---CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 589999999995 357999999999999999999999999999999999999886 49998887
Q ss_pred ------eEEEEeccCcCCC-CcHHHHHhcCCCCCh-------hhHHHHHHHhchHHHHHhcccCCccccccCCCccchHH
Q 000463 709 ------TTAYVAQTSWIQN-GTIEENILFGLPMNR-------AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQ 774 (1479)
Q Consensus 709 ------~iayv~Q~~~i~~-~Tv~enI~fg~~~~~-------~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 774 (1479)
.++|++|++.++. .|++||+.++..... ....+.. .....+-++.+... ......+.+|||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~--~~~~~~~~~LS~G~ 157 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQ-KQRALQALTRVGMV--HFAHQRVSTLSGGQ 157 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHH-HHHHHHHHHHcCCH--HHHhCCccccCHHH
Confidence 2699999987765 699999988642100 0000000 01112223333221 23456778999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCcccc-cCCEEEEEeCCEEEEecCh
Q 000463 775 KQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRY 852 (1479)
Q Consensus 775 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~-~~D~i~~l~~G~i~~~g~~ 852 (1479)
||||+||||++.+|+++||||||++||+++.+.+.+.+.+... +|+|+|++||+++.+. .||+|++|++|++.+.|++
T Consensus 158 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~ 237 (262)
T PRK09984 158 QQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSS 237 (262)
T ss_pred HHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999876655544 4899999999999875 4899999999999999999
Q ss_pred HHH
Q 000463 853 NAL 855 (1479)
Q Consensus 853 ~~l 855 (1479)
+++
T Consensus 238 ~~~ 240 (262)
T PRK09984 238 QQF 240 (262)
T ss_pred HHh
Confidence 886
No 497
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=329.48 Aligned_cols=198 Identities=25% Similarity=0.395 Sum_probs=161.2
Q ss_pred EEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------eEEEEecc
Q 000463 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------TTAYVAQT 716 (1479)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------~iayv~Q~ 716 (1479)
++++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| .++|++|+
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~ 78 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQN 78 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCC
Confidence 689999999953 4799999999999999999999999999999999999999999999987 37999999
Q ss_pred CcCCC-CcHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHHHHHHHHHHhcCCCEEE
Q 000463 717 SWIQN-GTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYL 792 (1479)
Q Consensus 717 ~~i~~-~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ill 792 (1479)
+.++. .|++||+.++... ......+ ...+-++.+.. ......++.+||||||||++||||++.+|+++|
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gl--~~~~~~~~~~LSgGq~qrl~laral~~~p~lll 151 (255)
T PRK11248 79 EGLLPWRNVQDNVAFGLQLAGVEKMQRLE-----IAHQMLKKVGL--EGAEKRYIWQLSGGQRQRVGIARALAANPQLLL 151 (255)
T ss_pred CccCCCCcHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCC--hhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 87765 6999999875321 1111111 11222333322 122345778999999999999999999999999
Q ss_pred EeCccCCCChhhHHHHHHHHHhhhc-CCcEEEEEccCCccccc-CCEEEEEe--CCEEEEecCh
Q 000463 793 LDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMR--EGMIVQSGRY 852 (1479)
Q Consensus 793 LDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvTH~~~~l~~-~D~i~~l~--~G~i~~~g~~ 852 (1479)
|||||++||+.+.+.+.+.+.+... +|+|+|++||+++++.. ||++++|+ +|++++.++.
T Consensus 152 LDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 152 LDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999876655433 48999999999999865 89999998 5999987654
No 498
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=330.41 Aligned_cols=208 Identities=25% Similarity=0.328 Sum_probs=165.6
Q ss_pred cEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC----------
Q 000463 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG---------- 708 (1479)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g---------- 708 (1479)
.++++|++++|+. +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 5899999999953 4699999999999999999999999999999999999987 499998876
Q ss_pred -----eEEEEeccCcCCC-CcHHHHHhcCCCCChh--hHHHHHHHhchHHHHHhcccC--CccccccCCCccchHHHHHH
Q 000463 709 -----TTAYVAQTSWIQN-GTIEENILFGLPMNRA--KYGEVVRVCCLEKDLEMMEYG--DQTEIGERGINLSGGQKQRI 778 (1479)
Q Consensus 709 -----~iayv~Q~~~i~~-~Tv~enI~fg~~~~~~--~~~~v~~~~~l~~dl~~l~~g--d~t~ig~~g~~LSGGQkqRv 778 (1479)
.++|++|++.++. .|++||+.++...... ..++..+ ...+.++.+... ........+.+||||||||+
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv 158 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDE--RVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRL 158 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHH--HHHHHHHHcCCccchhhhhccChhhCCHHHHHHH
Confidence 2699999998775 5999999875321100 0111000 011222222110 01234567889999999999
Q ss_pred HHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEeCCEEEEecChHHHHh
Q 000463 779 QLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1479)
Q Consensus 779 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1479)
+||||++++|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++++.. ||+|++|++|++++.|+++++.+
T Consensus 159 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (253)
T PRK14267 159 VIARALAMKPKILLMDEPTANIDPVGTAKIEELLFEL-KKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKVFE 237 (253)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHH-hhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999998765554 457999999999999765 99999999999999999988764
No 499
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=329.94 Aligned_cols=205 Identities=27% Similarity=0.370 Sum_probs=167.2
Q ss_pred ccEEEEeeEEEecCCCCcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC---------
Q 000463 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG--------- 708 (1479)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g--------- 708 (1479)
..++++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 9 ~~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 85 (264)
T PRK14243 9 TVLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVD 85 (264)
T ss_pred eEEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccC
Confidence 46999999999952 479999999999999999999999999999999999876 4799999876
Q ss_pred ------eEEEEeccCcCCCCcHHHHHhcCCCCC---h---hhHHHHHHHhchHHHHHhcccCCccccccCCCccchHHHH
Q 000463 709 ------TTAYVAQTSWIQNGTIEENILFGLPMN---R---AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQ 776 (1479)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~~~---~---~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 776 (1479)
.++|++|++.+++.|++||+.++.... . ++..+.++.+++..++. ...+.++.+|||||||
T Consensus 86 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~q 158 (264)
T PRK14243 86 PVEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-------DKLKQSGLSLSGGQQQ 158 (264)
T ss_pred hHHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-------HHhcCCcccCCHHHHH
Confidence 279999999888789999999864321 1 11111222222222221 1245678899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcCCcEEEEEccCCccccc-CCEEEEEe---------CCEE
Q 000463 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMR---------EGMI 846 (1479)
Q Consensus 777 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvTH~~~~l~~-~D~i~~l~---------~G~i 846 (1479)
|++||||++.+|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++++.. ||++++|+ +|++
T Consensus 159 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~-~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i 237 (264)
T PRK14243 159 RLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHEL-KEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYL 237 (264)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHH-hcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceE
Confidence 999999999999999999999999999999987655443 456899999999999875 89999998 8999
Q ss_pred EEecChHHHHhc
Q 000463 847 VQSGRYNALLNS 858 (1479)
Q Consensus 847 ~~~g~~~~l~~~ 858 (1479)
++.|+.+++.+.
T Consensus 238 ~~~~~~~~~~~~ 249 (264)
T PRK14243 238 VEFDRTEKIFNS 249 (264)
T ss_pred EEeCCHHHHHhC
Confidence 999999988653
No 500
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.9e-34 Score=340.29 Aligned_cols=212 Identities=20% Similarity=0.318 Sum_probs=169.4
Q ss_pred CccEEEEeeEEEecCCC-CcccceeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccC---CcEEEECC---------
Q 000463 642 NIAVEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKI---SGKVKVCG--------- 708 (1479)
Q Consensus 642 ~~~i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~---~G~i~~~g--------- 708 (1479)
+..++++|++++|.... ..++++|+||+|++||+++|+|+||||||||+++|+|+++|. +|+|.++|
T Consensus 10 ~~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~ 89 (330)
T PRK09473 10 DALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEK 89 (330)
T ss_pred CceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHH
Confidence 34789999999996432 346999999999999999999999999999999999999985 99999887
Q ss_pred --------eEEEEeccCc---CCCCcHHHHHhcCCC----CChhhHHHHHHHhchHHHHHhcccCC-ccccccCCCccch
Q 000463 709 --------TTAYVAQTSW---IQNGTIEENILFGLP----MNRAKYGEVVRVCCLEKDLEMMEYGD-QTEIGERGINLSG 772 (1479)
Q Consensus 709 --------~iayv~Q~~~---i~~~Tv~enI~fg~~----~~~~~~~~v~~~~~l~~dl~~l~~gd-~t~ig~~g~~LSG 772 (1479)
.++|++|+|. .+..|+.+|+..... .+..... .++. +-++.+...+ ...++..+.+|||
T Consensus 90 ~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~--~~~~---~~L~~vgL~~~~~~~~~~p~~LSg 164 (330)
T PRK09473 90 ELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAF--EESV---RMLDAVKMPEARKRMKMYPHEFSG 164 (330)
T ss_pred HHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHH--HHHH---HHHHHcCCCChHHHhcCCcccCCH
Confidence 3899999983 345789888864321 1111111 1111 1222222221 1235678899999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCccCCCChhhHHHHHHHHHhhhcC-CcEEEEEccCCccccc-CCEEEEEeCCEEEEec
Q 000463 773 GQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1479)
Q Consensus 773 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvTH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1479)
||||||+||||++.+|+++|+||||++||+.++..+.+.+.+...+ |.|+|+||||++.+.. ||+|++|++|+|++.|
T Consensus 165 G~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g 244 (330)
T PRK09473 165 GMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYG 244 (330)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEEC
Confidence 9999999999999999999999999999999999998766555443 8999999999999875 8999999999999999
Q ss_pred ChHHHHhc
Q 000463 851 RYNALLNS 858 (1479)
Q Consensus 851 ~~~~l~~~ 858 (1479)
+.+++.+.
T Consensus 245 ~~~~i~~~ 252 (330)
T PRK09473 245 NARDVFYQ 252 (330)
T ss_pred CHHHHHhC
Confidence 99998764
Done!