Query 000463
Match_columns 1479
No_of_seqs 487 out of 5531
Neff 7.4
Searched_HMMs 29240
Date Tue Mar 26 21:20:45 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/000463.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_13-17//hhsearch_pdb/000463hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1593.8 120.3 1203 273-1479 1-1292(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1283.6 100.6 1144 325-1479 45-1246(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 742.6 59.3 490 988-1479 137-629 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 711.0 50.6 491 987-1479 108-601 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 678.0 50.9 538 935-1479 25-566 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 672.3 57.3 543 932-1479 8-554 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 653.8 55.1 546 320-867 6-574 (578)
8 3b60_A Lipid A export ATP-bind 1.0 1 1 651.5 63.7 538 935-1479 13-555 (582)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 649.4 65.7 538 935-1479 13-555 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 642.2 64.4 538 937-1479 9-558 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1593.79 Aligned_cols=1203 Identities=18% Similarity=0.205 Sum_probs=903.8
Q ss_pred HHHCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC--------------CCCCCHHHHHHHHH-HH---HHHHH
Q ss_conf 997004-6988879999999011278999999710899998--------------78961489999998-99---99999
Q 000463 273 LLSKGY-KSPLKIDEIPSLSPQHRAERMSELFESKWPKPHE--------------KCKHPVRTTLLRCF-WK---EVAFT 333 (1479)
Q Consensus 273 l~~~g~-~~~L~~~Dl~~L~~~~~~~~~~~~f~~~w~~~~~--------------~~~~sl~~al~~~~-~~---~~~~~ 333 (1479)
|++.|. |++|+..|.+++.|+|..+...+.+++.|....+ ..++.-++.||+.- ++ -++++
T Consensus 1 ~~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Lfrya~~~d~~l~~~g 80 (1321)
T 4f4c_A 1 MLRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVSIPQLYRYTTTLEKLLLFIG 80 (1321)
T ss_dssp ---CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCCHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHH
T ss_conf 98773100687635445679501110000113454243554334310012232025687799997315676789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC-------CCC--------CCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998723-------999--------870-----5789999999999999999999999999
Q 000463 334 AFLAIVRLCVMYVGPVLIQRFVDFTS-------GKS--------SSF-----YEGYYLVLILLVAKFVEVFSTHQFNFNS 393 (1479)
Q Consensus 334 ~~~~l~~~~~~~~~P~lL~~li~~~~-------~~~--------~~~-----~~g~~l~~~l~~~~~~~~l~~~~~~~~~ 393 (1479)
.++.++.-+..-+.++++..+++... ... ... ..-..++..++...+...++.....+..
T Consensus 81 ~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~ 160 (1321)
T 4f4c_A 81 TLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCY 160 (1321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997010001454300034431001689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999986489233306798899999999999999999-99999999999999989999888779999
Q 000463 394 QKLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMM-LQLHAVWLMPLQISVALILLYNCLGASVI 472 (1479)
Q Consensus 394 ~~~g~rir~~L~~~Iy~K~L~ls~~~~~~~~~GeivNlms~D~~ri~~~~-~~~~~lw~~plqi~lal~lL~~~lG~s~l 472 (1479)
..+|.|+...+...+|+|.++++....+++++|+++|.+++|++++++++ ..+..++..+++++.++++++..-...++
T Consensus 161 ~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~l~l 240 (1321)
T 4f4c_A 161 LYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQLTL 240 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999997889899879984899999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999997899999999999999999999937999998450999999999999999999999999999
Q 000463 473 TTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSIS 552 (1479)
Q Consensus 473 ~gl~v~il~~~~~~~~~~~~~~~q~~~m~~~D~Ri~~~~EiL~~Ik~IK~~awE~~f~~~I~~~R~~El~~l~~~~~~~a 552 (1479)
+.++++++.+++..+++++..+++.+.++..+++.+.++|.++|||+||+|+||+.+.++..+..++..+...+.....+
T Consensus 241 v~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1321)
T 4f4c_A 241 VMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFLG 320 (1321)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999983999998214299999999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999--9999999999982686678789999999999999999989999999999999999999822435763
Q 000463 553 GNIIVMWSTPV--LISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVN 630 (1479)
Q Consensus 553 ~~~~~~~~~p~--lv~~~tF~~~~l~~~~Lta~~vFt~lalf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~ 630 (1479)
........... ++.++.++.+...++.++++.+|+++.++..+..|+..++..+..+.++.+|++||.+||+.++..+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 400 (1321)
T 4f4c_A 321 ISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPVID 400 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999999599869999999999999999999899999999999999999999971785345
Q ss_pred CCC-CCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-
Q ss_conf 211-235699997319997238980699996431001499738959999918999768999998468446774899879-
Q 000463 631 ESV-ERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG- 708 (1479)
Q Consensus 631 ~~~-~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~i~l~i~~g~~~~ivG~~GsGKStLl~~ilGe~~~~~G~v~~~g- 708 (1479)
+.. ...+....++.|+++|++|+|+..++.++|+|+||++++|+++||||++|||||||+++|+|+++|.+|+|.++|
T Consensus 401 ~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~~~G~I~idG~ 480 (1321)
T 4f4c_A 401 SSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITIDGV 480 (1321)
T ss_dssp CSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCCSEEEEEETTE
T ss_pred CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 66655656778887679998554079999874333318862288278998058985778888754565164486157996
Q ss_pred ------------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf ------------5899904676888858899733998-994229999998432999974346886313569886666899
Q 000463 709 ------------TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQK 775 (1479)
Q Consensus 709 ------------~iayv~Q~~wi~~~Ti~eNIlfg~~-~~~~~y~~v~~~c~L~~dl~~l~~Gd~t~ige~g~~LSGGQk 775 (1479)
++|||+|+||++++||||||+||.+ .+++++.++++.|++.+|++.||+||+|+|||+|.+||||||
T Consensus 481 ~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vGe~G~~LSGGQk 560 (1321)
T 4f4c_A 481 DVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQK 560 (1321)
T ss_dssp ETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEESSSSCCCCHHHH
T ss_pred CCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCHHHH
T ss_conf 50112599985046665875332078616788641552209999999987565468870888886075589887777787
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999812998999807667889656999999999563199699998048761012888999939779891485789
Q 000463 776 QRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNAL 855 (1479)
Q Consensus 776 qRi~LARAly~~~~i~lLDdp~salD~~~~~~i~~~~~~~~l~~kTvilvTh~~~~l~~~D~i~vl~~G~i~~~G~~~el 855 (1479)
|||+||||+|+||+|++|||||||||++++ +++++++.+++++||+|+|||+++.++.||+|++|++|+|+++|+|+||
T Consensus 561 QRiaiARAl~~~~~IliLDE~tSaLD~~te-~~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G~ive~Gth~eL 639 (1321)
T 4f4c_A 561 QRIAIARALVRNPKILLLDEATSALDAESE-GIVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRAL 639 (1321)
T ss_dssp HHHHHHHHHTTCCSEEEEESTTTTSCTTTH-HHHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHH-HHHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECCEEECCCCHHHH
T ss_conf 999999987259998998455446887899-9999999998479889997363878986898999639965136899999
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHCCCCC-C-CCCCC----CCCCCCCCCCCCCCCCCC-----------CCCCCCCCCC--
Q ss_conf 711764689999864334453215557-8-99999----999998653201001578-----------8532233556--
Q 000463 856 LNSGMDFGALVAAHETSMELVEVGKTM-P-SGNSP----KTPKSPQITSNLQEANGE-----------NKSVEQSNSD-- 916 (1479)
Q Consensus 856 ~~~~~~f~~l~~~~~~~~~~~~~~~~~-~-~~~~~----~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~-- 916 (1479)
++.++.|.++...+.......+..+.. . +.... .........+........ ....++....
T Consensus 640 ~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (1321)
T 4f4c_A 640 MAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSITNGPVIDEKEERIG 719 (1321)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHCC--------------------------------------------------CCCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHCC
T ss_conf 98532799999962212222332334433223211122222342222222110221110132124567740257775315
Q ss_pred CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC----CCCCCCCCCHHHHH
Q ss_conf 77712216887731750089999999982345999999999999998853211000013455----77788894054789
Q 000463 917 KGNSKLIKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSE----DHSMSFNPSLFIGV 992 (1479)
Q Consensus 917 ~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~----~~~~~~~~~~~~~v 992 (1479)
+.......++.++.+..+...++.|......++.+.+.+++.++.........+|++.|.+. .........+|..+
T Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1321)
T 4f4c_A 720 KDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALM 799 (1321)
T ss_dssp CCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 40389999999970786310999999987789999999999999999999999999999987517934556678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC--CCCHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q ss_conf 888878999999999999999999999999999999781487520102--570136898830366743355799999999
Q 000463 993 YGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDT--TPSGRILSRASTDQTNIDLFLPFFVGITVA 1070 (1479)
Q Consensus 993 y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~--~p~G~ilnR~s~D~~~id~~l~~~l~~~~~ 1070 (1479)
|.+++++..++.+++.+++.+.+.++++++|.+++++++++|++|||. +|+|+++||+++|++.+|..++..+..++.
T Consensus 800 ~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~ 879 (1321)
T 4f4c_A 800 FLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVIT 879 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999998887349933321678884888850250599999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHH
Q ss_conf 99999999999998757799999999999999999999999999999987320159999995401999997172889999
Q 000463 1071 MYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQ 1150 (1479)
Q Consensus 1071 ~~~~~i~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~~~~f~~ 1150 (1479)
..+.+++.++++++.+|.+.+++++++++.++...++.+..+...+......++...++.|++.|+.+||+|+.|++|.+
T Consensus 880 ~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~ 959 (1321)
T 4f4c_A 880 TLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYE 959 (1321)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHH
T ss_pred HHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 86537777022137868999999998889999999999999999999999988898899999962798886141488999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999977655999985767999999999999999999999-986067--75856899999999999999999999999
Q 000463 1151 ENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFM-ILLPSS--IIKPENVGLSLSYGLSLNGVLFWAIYMSC 1227 (1479)
Q Consensus 1151 ~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~-~~~~~~--~~~~g~~gl~l~y~l~l~~~l~~~v~~~~ 1227 (1479)
++.+..+...+..+.......+.......+..+...++..+. ..+..+ .+.++.+...+.+......++.++...+.
T Consensus 960 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 1039 (1321)
T 4f4c_A 960 NFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFP 1039 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999987578875376542147899999999877889999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC-CCCEEEEEEEEECCCEEEEECCCCC
Q ss_conf 999986369999985038500000136999999999973179995355635999-9512211389838929999979999
Q 000463 1228 FVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNT-PLVLKGITLSIHGGEKIGVVGRTGS 1306 (1479)
Q Consensus 1228 ~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~-~~vL~~isl~I~~GekvgIVGrTGS 1306 (1479)
+++..+.+++|+.++.+.++|.+ +...+++.||..|.|+|+||+|+|+++. .+||+|+||+|+|||+|||||||||
T Consensus 1040 ~~~~~~~a~~ri~~~l~~~~~~~---~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGs 1116 (1321)
T 4f4c_A 1040 EYAKATFAGGIIFGMLRKISKID---SLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGC 1116 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSC---TTCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEEECSTTS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCC
T ss_conf 99999999998999860766577---766778788888818999879857999988212451699889899999899998
Q ss_pred CHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCC---CCCCHHHHHHHHHHCCC
Q ss_conf 888999998505789862899969736998956661001787376654666576605999---99999999999998495
Q 000463 1307 GKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI---GQYSDEEIWKSLERCQL 1383 (1479)
Q Consensus 1307 GKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~---~~~sdeeI~~aL~~~~L 1383 (1479)
|||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+||||+||..+ ++++|+|||+|++++++
T Consensus 1117 GKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l 1196 (1321)
T 4f4c_A 1117 GKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANI 1196 (1321)
T ss_dssp STTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 19999999956863899789999998654999999854599878997327239999745499999999999999998298
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf 38997194875300018999889059999999998616997899837899999985999999999873794789971591
Q 000463 1384 KDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRI 1463 (1479)
Q Consensus 1384 ~~~i~~lp~gLdt~v~e~G~nLSgGQrQll~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl 1463 (1479)
+++|.++|+||||.|+|+|.|||||||||+||||||||+|+|||||||||+||++||+.||++|++.+++||+|+||||+
T Consensus 1197 ~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~~~~TvI~IAHRL 1276 (1321)
T 4f4c_A 1197 HNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCIVIAHRL 1276 (1321)
T ss_dssp HHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTSSSSEEEEECSSS
T ss_pred HHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCH
T ss_conf 49997176789998238891569999999999999971799899968111578999999999999973999899960689
Q ss_pred HHHHHCCEEEEEECCC
Q ss_conf 3563019799980999
Q 000463 1464 PTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1464 ~ti~~~DrIlVLd~G~ 1479 (1479)
+|+++||||+|||+|+
T Consensus 1277 sTi~~aD~I~Vld~G~ 1292 (1321)
T 4f4c_A 1277 NTVMNADCIAVVSNGT 1292 (1321)
T ss_dssp STTTTCSEEEEESSSS
T ss_pred HHHHHCCEEEEEECCE
T ss_conf 9999699999998989
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1283.63 Aligned_cols=1144 Identities=19% Similarity=0.210 Sum_probs=833.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---------CC----------CHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98999999999999999999999999999998723999---------87----------057899999999999999999
Q 000463 325 CFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKS---------SS----------FYEGYYLVLILLVAKFVEVFS 385 (1479)
Q Consensus 325 ~~~~~~~~~~~~~l~~~~~~~~~P~lL~~li~~~~~~~---------~~----------~~~g~~l~~~l~~~~~~~~l~ 385 (1479)
..|..++++.++.++..++....|+++..+++...... .. ......++..++...++..++
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (1284)
T 3g5u_A 45 LDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIV 124 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999999999999999999999986134443322222211111002446889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999998648923330679889999999999999999999-9999999999999899998
Q 000463 386 THQFNFNSQKLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQ-LHAVWLMPLQISVALILLY 464 (1479)
Q Consensus 386 ~~~~~~~~~~~g~rir~~L~~~Iy~K~L~ls~~~~~~~~~GeivNlms~D~~ri~~~~~~-~~~lw~~plqi~lal~lL~ 464 (1479)
.....+...+.+.++-..+...+|+|.++++.....++++|+++|.++.|++.+.+.... +..+....+.++.++++++
T Consensus 125 ~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 204 (1284)
T 3g5u_A 125 AYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGF 204 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999986998997568877899999988999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88779999999999999999999999978999999999999999999999379999984509999999999999999999
Q 000463 465 NCLGASVITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWL 544 (1479)
Q Consensus 465 ~~lG~s~l~gl~v~il~~~~~~~~~~~~~~~q~~~m~~~D~Ri~~~~EiL~~Ik~IK~~awE~~f~~~I~~~R~~El~~l 544 (1479)
..-...+++.+++++++..+..++.+...+...+.++..++......|.++||++||.|++|+.+.++..+.-++-.+.-
T Consensus 205 ~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~~~ 284 (1284)
T 3g5u_A 205 TRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRLG 284 (1284)
T ss_dssp HTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99899999999999999999999999999999999999999999999999787999984653999999999999999999
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999--999999999999999826866787899999999999999999899999999999999999998
Q 000463 545 TKFMYSISGNIIVMW--STPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKY 622 (1479)
Q Consensus 545 ~~~~~~~a~~~~~~~--~~p~lv~~~tF~~~~l~~~~Lta~~vFt~lalf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~f 622 (1479)
.+.....+....... .....+..++++.+....+.++++.+++++..+.....|+..+...+..+.++.++.+|+.++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~ 364 (1284)
T 3g5u_A 285 IKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKI 364 (1284)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999992998899999999999999999999999999999999999999999
Q ss_pred HCCCCC-CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 224357-6321123569999731999723898069999643100149973895999991899976899999846844677
Q 000463 623 MLSREL-VNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKIS 701 (1479)
Q Consensus 623 L~~~e~-~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~i~l~i~~g~~~~ivG~~GsGKStLl~~ilGe~~~~~ 701 (1479)
++.++. ++......+.....+.|+++|++|+|+.+.+.++|+|+||++++|+.++|+|++|||||||+++|+|+++|.+
T Consensus 365 l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~g~~~~~~ 444 (1284)
T 3g5u_A 365 IDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLD 444 (1284)
T ss_dssp TSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHTTTSSCCSE
T ss_pred HCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCC
T ss_conf 72898677666567777777771899998997699998710125458975998899989999979999999807889997
Q ss_pred CEEEECCE-------------EEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCC
Q ss_conf 48998795-------------899904676888858899733998-9942299999984329999743468863135698
Q 000463 702 GKVKVCGT-------------TAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERG 767 (1479)
Q Consensus 702 G~v~~~g~-------------iayv~Q~~wi~~~Ti~eNIlfg~~-~~~~~y~~v~~~c~L~~dl~~l~~Gd~t~ige~g 767 (1479)
|+|.++|. ++||+|+||++++||+|||.||.+ .+.++++++++.|++.++++.+|+|++|.+||+|
T Consensus 445 G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g 524 (1284)
T 3g5u_A 445 GMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQFDTLVGERG 524 (1284)
T ss_dssp EEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGGGCCCSSSS
T ss_pred EEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCC
T ss_conf 38999999877579999986548986887537766999974579899999999999982969999746563345014787
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEE
Q ss_conf 86666899999999998129989998076678896569999999995631996999980487610128889999397798
Q 000463 768 INLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIV 847 (1479)
Q Consensus 768 ~~LSGGQkqRi~LARAly~~~~i~lLDdp~salD~~~~~~i~~~~~~~~l~~kTvilvTh~~~~l~~~D~i~vl~~G~i~ 847 (1479)
.+|||||||||+||||++++|+|++||||||+||+++++.+ ++++....+++|+|+|||+++.+..+|+|++|++|+|+
T Consensus 525 ~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~i~~~d~i~vl~~G~i~ 603 (1284)
T 3g5u_A 525 AQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVV-QAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIV 603 (1284)
T ss_dssp CSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHH-HHHHHHHHTTSEEEEECSCHHHHTTCSEEEECSSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEE
T ss_conf 86599999999999999529998999798777799999999-99999973999899994077899749989999899999
Q ss_pred EECCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 91485789711764689999864334453215557899999999998653201001578853223355677712216887
Q 000463 848 QSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEE 927 (1479)
Q Consensus 848 ~~G~~~el~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~ 927 (1479)
+.|+++|+++.++.|.++...+....+..............................................+...+|+
T Consensus 604 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1284)
T 3g5u_A 604 EQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSICGPHDQDRKLSTKEA 683 (1284)
T ss_dssp CEECHHHHHHTTSHHHHHHHHTC---------------------------------------------------------
T ss_pred EECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 97889999867877999999743002211133333322222344333333332000345433344564223321102455
Q ss_pred H--HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CCCCCCCCC--CCCCCHHHHHHHHHHHH
Q ss_conf 7--317500899999999823459999999999999988532110000----134557778--88940547898888789
Q 000463 928 R--ETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLS----YETSEDHSM--SFNPSLFIGVYGSTAVL 999 (1479)
Q Consensus 928 ~--~~g~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~----~~~~~~~~~--~~~~~~~~~vy~~l~~~ 999 (1479)
. ......+..++.|.+...... .+.+++.++..+......+++. .|.+..... ......+..+|.+++++
T Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 761 (1284)
T 3g5u_A 684 LDEDVPPASFWRILKLNSTEWPYF--VVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGII 761 (1284)
T ss_dssp CCCCCSCCCTTHHHHHHHHTCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCHHHHHHHHHHCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 531366258999999845157999--999999999999999999999999999855685033677999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC--CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999978148752010--25701368988303667433557999999999999999
Q 000463 1000 SMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFD--TTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLG 1077 (1479)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd--~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~ 1077 (1479)
..++.+++.+.+.+.+.+...++|.+++++++++|++||| .+|+|++++|+++|++.++..++..+..++...+.+++
T Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~ 841 (1284)
T 3g5u_A 762 SFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGT 841 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999998399888757899889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHH
Q ss_conf 999999875779999---99999999999999999999999999873201599999954019999971728899999999
Q 000463 1078 IFIITCQYAWPTIFL---VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVN 1154 (1479)
Q Consensus 1078 ~~~v~~~~~~~~~~~---~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~~~~f~~~~~~ 1154 (1479)
.+++++.++|.+.++ ++|++++..++...+.. ...+......+....++.|++.|+.+||+|+.++.+.+++.+
T Consensus 842 ~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~ 918 (1284)
T 3g5u_A 842 GIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLS---GQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQ 918 (1284)
T ss_dssp HHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 99999999699999999999999999999999999---999999999999999999999889999984659999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99977655999985767999999999999999---99999-998606775856899999999999999999999999999
Q 000463 1155 RVNGNLRMDFHNNGSNEWLGFRLELLGSFTFC---LATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVE 1230 (1479)
Q Consensus 1155 ~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~---~~~~~-~~~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~~~le 1230 (1479)
..+...+...... .|.+....+...+... ....+ ...+..+.++.+.+...+.+......++..+......+.
T Consensus 919 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1284)
T 3g5u_A 919 SLQIPYRNAMKKA---HVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYA 995 (1284)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCST
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999---9999999999999999999999999999990980699999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCCCCCHH
Q ss_conf 98636999998503850000013699999999997317999535563599-99512211389838929999979999888
Q 000463 1231 NRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKS 1309 (1479)
Q Consensus 1231 ~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIVGrTGSGKS 1309 (1479)
....+.+|+.++.+.+++.+...+ .+.+.++..|.|+|+||+++|+.. ..++|+|+||+|++||++||||+||||||
T Consensus 996 ~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKS 1073 (1284)
T 3g5u_A 996 KATVSASHIIRIIEKTPEIDSYST--QGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKS 1073 (1284)
T ss_dssp HHHHHHHHHHHHHHSCCSSSSCCS--SCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSSTTHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCCCCHH
T ss_conf 999999999999838876666555--665456777857999989977999987002030599769988999889999789
Q ss_pred HHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCC---CCCCHHHHHHHHHHCCCHHH
Q ss_conf 999998505789862899969736998956661001787376654666576605999---99999999999998495389
Q 000463 1310 TLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI---GQYSDEEIWKSLERCQLKDV 1386 (1479)
Q Consensus 1310 TLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~---~~~sdeeI~~aL~~~~L~~~ 1386 (1479)
||+++|+|+++|++|+|.+||.|+++++++++|+++++|||||.+|++|||+|+.+. ...+++++++++++++++++
T Consensus 1074 Tl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~~~~ 1153 (1284)
T 3g5u_A 1074 TVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQF 1153 (1284)
T ss_dssp HHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHH
T ss_conf 99999946867899779899998000789999702689877874066669999746687789999999999998395999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
Q ss_conf 97194875300018999889059999999998616997899837899999985999999999873794789971591356
Q 000463 1387 VAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTV 1466 (1479)
Q Consensus 1387 i~~lp~gLdt~v~e~G~nLSgGQrQll~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ti 1466 (1479)
+.++|+||||.|+|+|.+||||||||+||||||+++|+||+||||||+||.++++.|++.|++..+++|+|+||||++++
T Consensus 1154 i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi~isH~l~~i 1233 (1284)
T 3g5u_A 1154 IDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTI 1233 (1284)
T ss_dssp HSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEEEECSCTTGG
T ss_pred HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHH
T ss_conf 97270424561178889338999999999999974999999868755579999999999999867999899995587999
Q ss_pred HHCCEEEEEECCC
Q ss_conf 3019799980999
Q 000463 1467 MDCDRVIVVDAGL 1479 (1479)
Q Consensus 1467 ~~~DrIlVLd~G~ 1479 (1479)
.+||||+||++|+
T Consensus 1234 ~~~dri~vl~~G~ 1246 (1284)
T 3g5u_A 1234 QNADLIVVIQNGK 1246 (1284)
T ss_dssp GSCSEEEEEETBE
T ss_pred HCCCEEEEEECCE
T ss_conf 8099899998998
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=742.56 Aligned_cols=490 Identities=19% Similarity=0.259 Sum_probs=427.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 54789888878999999999999999999999999999999781487520102570136898830366743355799999
Q 000463 988 LFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGI 1067 (1479)
Q Consensus 988 ~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~ 1067 (1479)
.+...|++++++..++.+++.+++.+.+.+...+++.++++++++.|++|||++++|++++|+++|++.++..+...+..
T Consensus 137 ~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~ 216 (1321)
T 4f4c_A 137 NVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGM 216 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999997889899879984899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHH
Q ss_conf 99999999999999998757799999999999999999999999999999987320159999995401999997172889
Q 000463 1068 TVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTT 1147 (1479)
Q Consensus 1068 ~~~~~~~~i~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~~~~ 1147 (1479)
++...+.+++.++++++.+|.+.++++..+++...+..++.+..+...+......+...+++.|++.|+++||+|++|+.
T Consensus 217 ~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 296 (1321)
T 4f4c_A 217 AFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRY 296 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999983999998214299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999997765599998576799999999999999999999-99860677585689999999999999999999999
Q 000463 1148 FYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMS 1226 (1479)
Q Consensus 1148 f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~ 1226 (1479)
+.+++.+..+...+..........+......++..+...+..++ ...+..+.+++|.+...+.|...+..++..+....
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~ 376 (1321)
T 4f4c_A 297 ELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQL 376 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999599869999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCCC
Q ss_conf 999998636999998503850000013699999999997317999535563599-9951221138983892999997999
Q 000463 1227 CFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTG 1305 (1479)
Q Consensus 1227 ~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIVGrTG 1305 (1479)
..+.....+.+|+.++.+.+++.+... .......+..|.|+|+||+|+|+.. ..++|+|+||+|++||++||||+||
T Consensus 377 ~~~~~~~~s~~ri~~~l~~~~~~~~~~--~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sG 454 (1321)
T 4f4c_A 377 AVLGTAQGAASGIYEVLDRKPVIDSSS--KAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSG 454 (1321)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCSSCSS--SCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCC
T ss_conf 999999999999999971785345666--556567788876799985540799998743333188622882789980589
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCH
Q ss_conf 98889999985057898628999697369989566610017873766546665766059999-99999999999984953
Q 000463 1306 SGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLK 1384 (1479)
Q Consensus 1306 SGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~-~~sdeeI~~aL~~~~L~ 1384 (1479)
||||||+++|+|+|+|.+|+|.+||+|+++++++++|++|++|||||.||+||||+||..+. +++|+++++|++.|+++
T Consensus 455 sGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~ 534 (1321)
T 4f4c_A 455 CGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAE 534 (1321)
T ss_dssp SCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCH
T ss_conf 85778888754565164486157996501125999850466658753320786167886415522099999999875654
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHH
Q ss_conf 89971948753000189998890599999999986169978998378999999859999999998737947899715913
Q 000463 1385 DVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIP 1464 (1479)
Q Consensus 1385 ~~i~~lp~gLdt~v~e~G~nLSgGQrQll~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ 1464 (1479)
+++..+|+|+||.|||+|.|||||||||+|||||++++|+|+|||||||+||++||+.|++.|++..+++|+|+||||++
T Consensus 535 ~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls 614 (1321)
T 4f4c_A 535 KFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLS 614 (1321)
T ss_dssp HHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTT
T ss_pred HHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 68870888886075589887777787999999987259998998455446887899999999999847988999736387
Q ss_pred HHHHCCEEEEEECCC
Q ss_conf 563019799980999
Q 000463 1465 TVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1465 ti~~~DrIlVLd~G~ 1479 (1479)
++.+||+|+||++|+
T Consensus 615 ~i~~aD~Iivl~~G~ 629 (1321)
T 4f4c_A 615 TIRNADLIISCKNGQ 629 (1321)
T ss_dssp TTTTCSEEEEEETTE
T ss_pred HHHHCCEEEEEECCE
T ss_conf 898689899963996
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=711.02 Aligned_cols=491 Identities=22% Similarity=0.305 Sum_probs=422.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 05478988887899999999999999999999999999999978148752010257013689883036674335579999
Q 000463 987 SLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVG 1066 (1479)
Q Consensus 987 ~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~ 1066 (1479)
..+..+|.+++++..++.+++.++..+.+.+...++|.+++++++++|++|||++++|++++|+++|++.++..++..+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~ 187 (1284)
T 3g5u_A 108 TTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIG 187 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999869989975688778999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHH
Q ss_conf 99999999999999999875779999999999999999999999999999998732015999999540199999717288
Q 000463 1067 ITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQT 1146 (1479)
Q Consensus 1067 ~~~~~~~~~i~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~~~ 1146 (1479)
.++...+.+++.+++++..+|.+.++++..++++..+..++.+..++..+......++..+++.|+++|+++||+|+.|+
T Consensus 188 ~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~ 267 (1284)
T 3g5u_A 188 MFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQK 267 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999997879999846539
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999997765599998576799999999999999999999-9986067758568999999999999999999999
Q 000463 1147 TFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYM 1225 (1479)
Q Consensus 1147 ~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~ 1225 (1479)
++.+++.+..+...+..........+......++..+...+..++ ...+..+.+++|.+...+.+.+....++..+...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~ 347 (1284)
T 3g5u_A 268 KELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPN 347 (1284)
T ss_dssp SHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999929988999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCC
Q ss_conf 9999998636999998503850000013699999999997317999535563599-995122113898389299999799
Q 000463 1226 SCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRT 1304 (1479)
Q Consensus 1226 ~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIVGrT 1304 (1479)
+..++....+.+|+.++.+.+++.+...+...++ .+..|.|+|+|++|+|+++ ..++|+|+||+|++||++||||+|
T Consensus 348 ~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~--~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~s 425 (1284)
T 3g5u_A 348 IEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKP--DNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNS 425 (1284)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCC--TTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCC
T ss_conf 9999999999999999972898677666567777--77777189999899769999871012545897599889998999
Q ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCC
Q ss_conf 998889999985057898628999697369989566610017873766546665766059999-9999999999998495
Q 000463 1305 GSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQL 1383 (1479)
Q Consensus 1305 GSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~-~~sdeeI~~aL~~~~L 1383 (1479)
|||||||+++|.|+++|++|+|.+||.|+++++++++|+++++|||||.+|+||||+|+.... +.++++++++++.+++
T Consensus 426 GsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~ 505 (1284)
T 3g5u_A 426 GCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANA 505 (1284)
T ss_dssp SSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCC
T ss_conf 99799999998078899973899999987757999998654898688753776699997457989999999999998296
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf 38997194875300018999889059999999998616997899837899999985999999999873794789971591
Q 000463 1384 KDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRI 1463 (1479)
Q Consensus 1384 ~~~i~~lp~gLdt~v~e~G~nLSgGQrQll~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl 1463 (1479)
++++..+|+|+||.++|+|.+||||||||+|||||++++|+||+||||||+||++|++.|++.+++..+++|+|+||||+
T Consensus 506 ~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l 585 (1284)
T 3g5u_A 506 YDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRL 585 (1284)
T ss_dssp HHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCH
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCH
T ss_conf 99997465633450147878659999999999999952999899979877779999999999999973999899994077
Q ss_pred HHHHHCCEEEEEECCC
Q ss_conf 3563019799980999
Q 000463 1464 PTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1464 ~ti~~~DrIlVLd~G~ 1479 (1479)
+++.+||+|+||++|+
T Consensus 586 ~~i~~~d~i~vl~~G~ 601 (1284)
T 3g5u_A 586 STVRNADVIAGFDGGV 601 (1284)
T ss_dssp HHHTTCSEEEECSSSC
T ss_pred HHHHCCCEEEEEECCE
T ss_conf 8997499899998999
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=678.02 Aligned_cols=538 Identities=22% Similarity=0.320 Sum_probs=455.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999982345999999999999998853211000013455777-8889-405478988887899999999999999
Q 000463 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHS-MSFN-PSLFIGVYGSTAVLSMVILVVRAYFVT 1012 (1479)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~-~~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~ 1012 (1479)
+..++.|++..+ +.+.+.+++.++..+..+..+++++...+.... ...+ ...++.+++++.++..++.+++.++..
T Consensus 25 ~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (598)
T 3qf4_B 25 LRRLLGYLRPHT--FTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIML 102 (598)
T ss_dssp HHHHGGGTGGGH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999--999999999999999999999999999999973688899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999997814875201025701368988303667433557999999999999999999999875779999
Q 000463 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1479)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~~ 1092 (1479)
..+.+...+++.++++++++.|++||+++++|++++|+++|++.++..+...+..++...+.+++.+++++..+|.+.++
T Consensus 103 ~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~ 182 (598)
T 3qf4_B 103 TLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLV 182 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999977999997688889999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999873201599999954019999971728899999999999776559999857679
Q 000463 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1479)
Q Consensus 1093 ~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1479)
++..+++++.+..++.+..++..+......++..+++.|+++|+.+||+|++|+.+.+++.+..+...+..........+
T Consensus 183 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (598)
T 3qf4_B 183 TLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGV 262 (598)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999997379999974870999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC
Q ss_conf 9999999999999999999-998606775856899999999999999999999999999986369999985038500000
Q 000463 1173 LGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1479)
Q Consensus 1173 l~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~ 1251 (1479)
.....+++..+...+..++ ...+..+.+++|.+...+.|...+..++..+...+..++..+.+++|+.++.+.|+|.+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 342 (598)
T 3qf4_B 263 LPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDD 342 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999985997899999999999999999999999999999999999999999768877777
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 13699999999997317999535563599995122113898389299999799998889999985057898628999697
Q 000463 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI 1331 (1479)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~isl~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1331 (1479)
..+.+.++..|.|+++|++++|+++. ++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.+||.
T Consensus 343 ----~~~~~~~~~~~~i~~~~v~~~y~~~~-~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~ 417 (598)
T 3qf4_B 343 ----PDAVELREVRGEIEFKNVWFSYDKKK-PVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGI 417 (598)
T ss_dssp ----SSCCCCCSCCCCEEEEEEECCSSSSS-CSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTE
T ss_pred ----CCCCCCCCCCCEEEEEEEEEECCCCC-CCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCE
T ss_conf ----77777777777189999899779998-6012227998699889998999996999999994585799808999999
Q ss_pred ECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 369989566610017873766546665766059999-9999999999998495389971948753000189998890599
Q 000463 1332 DISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1479)
Q Consensus 1332 dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~-~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1479)
|+++++.+++|+++++|||||.+|++|+|+|+.... ..++++++++++.+++++++..+|+|+||.++|+|.+||||||
T Consensus 418 ~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~ 497 (598)
T 3qf4_B 418 DIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQR 497 (598)
T ss_dssp EGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHH
T ss_pred EHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHH
T ss_conf 83018899998410899079823246399997447999999999999999697888974645323642278898799999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCC
Q ss_conf 999999986169978998378999999859999999998737947899715913563019799980999
Q 000463 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1411 Qll~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~ 1479 (1479)
||+|||||++++|+||+||||||++|++++..|++.|++..+++|+|+||||++++..||+|++|++|+
T Consensus 498 Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~ 566 (598)
T 3qf4_B 498 QLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGE 566 (598)
T ss_dssp HHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSS
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCE
T ss_conf 999999999649999999897667999999999999999808998999942778997199899998999
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=672.27 Aligned_cols=543 Identities=21% Similarity=0.261 Sum_probs=433.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCCC-CHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 500899999999823459999999999999988532110000134557778-8894-05478988887899999999999
Q 000463 932 KVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSM-SFNP-SLFIGVYGSTAVLSMVILVVRAY 1009 (1479)
Q Consensus 932 ~v~~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~-~~~~-~~~~~vy~~l~~~~~~~~~~~~~ 1009 (1479)
...++.++.|++..++ .+.+.+++.++..+..+..+++++.+.+..... ..+. ..+..++.++.++..++.+++.+
T Consensus 8 ~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (587)
T 3qf4_A 8 GGGSKTLARYLKPYWI--FAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGDFSLVLKTGILMLIVALIGAVGGIGCTV 85 (587)
T ss_dssp CCCCCCGGGGTGGGHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5349999999999999--99999999999999999999999999999873698799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999997814875201025701368988303667433557999999999999999999999875779
Q 000463 1010 FVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPT 1089 (1479)
Q Consensus 1010 ~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~ 1089 (1479)
+..+.+.+...+++.++++++++.|+.||+++++|+++||+++|++.++..+...+..++...+.+++.+++++..+|.+
T Consensus 86 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 165 (587)
T 3qf4_A 86 FASYASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKL 165 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999978897997658889999999999999999999999999999999999999999998999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999873201599999954019999971728899999999999776559999857
Q 000463 1090 IFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGS 1169 (1479)
Q Consensus 1090 ~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~ 1169 (1479)
.++++..+++...+..++.+..+...+......+.+.+++.|+++|+++||+|++|+.+.+++.+..+...+........
T Consensus 166 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 245 (587)
T 3qf4_A 166 SSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSL 245 (587)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998559999986214999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 6799999999999999999999-998606775856899999999999999999999999999986369999985038500
Q 000463 1170 NEWLGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSE 1248 (1479)
Q Consensus 1170 ~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E 1248 (1479)
..+......++..+...+..++ ...+..+.++.|.+...+.|...+..++..+...+..+.....+.+|+.++.+.+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~ 325 (587)
T 3qf4_A 246 IVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPA 325 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999999984993899999999999999999999999999999999999999999768976
Q ss_pred HHCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 00013699999999997317999535563599995122113898389299999799998889999985057898628999
Q 000463 1249 AAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIII 1328 (1479)
Q Consensus 1249 ~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~isl~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~I 1328 (1479)
.+. ...+.+.++..|.|+++|++++|+++.+++|+|+||+|++||++|||||||||||||+++|.|+++|++|+|.+
T Consensus 326 ~~~---~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i 402 (587)
T 3qf4_A 326 IEE---ADNALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEV 402 (587)
T ss_dssp CCC---CTTCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEE
T ss_pred CCC---CCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 578---87765668888807997889984899976421117998699889998999997999999992786699867989
Q ss_pred CCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 697369989566610017873766546665766059999-9999999999998495389971948753000189998890
Q 000463 1329 DGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSV 1407 (1479)
Q Consensus 1329 DG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~-~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1407 (1479)
||.|+++++.+++|+++++|||||.+|++|+|||+.... ..++++++++++.+++++++..+|+|+|+.++|+|.+|||
T Consensus 403 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSg 482 (587)
T 3qf4_A 403 DELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSG 482 (587)
T ss_dssp SSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCH
T ss_pred CCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCH
T ss_conf 99983407899998413897789867675599998524889999999999999684999975653121275189899299
Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCC
Q ss_conf 599999999986169978998378999999859999999998737947899715913563019799980999
Q 000463 1408 GQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1408 GQrQll~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~ 1479 (1479)
|||||++||||++++|+|++||||||++|+++++.|++.|++..+++|+|+||||++++..||+|++|++|+
T Consensus 483 GqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~ 554 (587)
T 3qf4_A 483 GQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGK 554 (587)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTE
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCE
T ss_conf 999999999999729999999797544799999999999998679998999822768898199899998998
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=653.82 Aligned_cols=546 Identities=22% Similarity=0.267 Sum_probs=445.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999899999999999999999999999999999872399987-05-----789999999999999999999999999
Q 000463 320 TTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSS-FY-----EGYYLVLILLVAKFVEVFSTHQFNFNS 393 (1479)
Q Consensus 320 ~al~~~~~~~~~~~~~~~l~~~~~~~~~P~lL~~li~~~~~~~~~-~~-----~g~~l~~~l~~~~~~~~l~~~~~~~~~ 393 (1479)
+.+++.+++.++...++.++..++..+.|++++.+++.+...... .. ..+.+++++++..++..++.....+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (578)
T 4a82_A 6 LQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLA 85 (578)
T ss_dssp HHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99988999999999999999999999999999999999981687114677888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999864892333067988999999999999999999-9999999999999989999888779999
Q 000463 394 QKLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVI 472 (1479)
Q Consensus 394 ~~~g~rir~~L~~~Iy~K~L~ls~~~~~~~~~GeivNlms~D~~ri~~~~~-~~~~lw~~plqi~lal~lL~~~lG~s~l 472 (1479)
.+++.++...+...+|+|.++++....+++++|+++|.++.|++++.+++. .++.+|..++.+++++++++..-+..++
T Consensus 86 ~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 165 (578)
T 4a82_A 86 QWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTL 165 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998789999768986999999999999999999999999999999999999999999699999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999997899999999999999999999937999998450999999999999999999999999999
Q 000463 473 TTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSIS 552 (1479)
Q Consensus 473 ~gl~v~il~~~~~~~~~~~~~~~q~~~m~~~D~Ri~~~~EiL~~Ik~IK~~awE~~f~~~I~~~R~~El~~l~~~~~~~a 552 (1479)
+.+++++++..+..++.++..+.+.+.++..+++.+.++|.++|||+||.|+||+.+.++..+.++++.+...+.....+
T Consensus 166 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (578)
T 4a82_A 166 AALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWNA 245 (578)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999824999998166499999999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999--9999999999982686678789999999999999999989999999999999999999822435763
Q 000463 553 GNIIVMWSTPV--LISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVN 630 (1479)
Q Consensus 553 ~~~~~~~~~p~--lv~~~tF~~~~l~~~~Lta~~vFt~lalf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~ 630 (1479)
........... .+.++.++.+....+.++++.+++++.++..+..|+..++..+..+.++.+|++|+.++++.++...
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 325 (578)
T 4a82_A 246 YSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIK 325 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999998599589999999999999999999999999999999999999999976897666
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC--
Q ss_conf 211235699997319997238980699996431001499738959999918999768999998468446774899879--
Q 000463 631 ESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-- 708 (1479)
Q Consensus 631 ~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~i~l~i~~g~~~~ivG~~GsGKStLl~~ilGe~~~~~G~v~~~g-- 708 (1479)
+.....+.......++++|++|+|++. +.++|+|+||++++|+.++++|++|||||||+++|+|.++|.+|+|.++|
T Consensus 326 ~~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~ 404 (578)
T 4a82_A 326 NGVGAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHN 404 (578)
T ss_dssp CCTTCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEE
T ss_pred CCCCCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEE
T ss_conf 787766667778807999999975899-9741343379987999999989999859999999846788999679999998
Q ss_pred -----------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf -----------5899904676888858899733998-9942299999984329999743468863135698866668999
Q 000463 709 -----------TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQ 776 (1479)
Q Consensus 709 -----------~iayv~Q~~wi~~~Ti~eNIlfg~~-~~~~~y~~v~~~c~L~~dl~~l~~Gd~t~ige~g~~LSGGQkq 776 (1479)
.++||+|+||++++|++|||.+|.+ .++++..++++.+.+.++++.+|+|++|.+||+|.+|||||||
T Consensus 405 ~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~LSgGq~Q 484 (578)
T 4a82_A 405 IKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQ 484 (578)
T ss_dssp GGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTSCHHHHH
T ss_pred HHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCCCHHHHH
T ss_conf 44278999960068992898347645999985279998899999999880959999757330102530688967999999
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999998129989998076678896569999999995631996999980487610128889999397798914857897
Q 000463 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALL 856 (1479)
Q Consensus 777 Ri~LARAly~~~~i~lLDdp~salD~~~~~~i~~~~~~~~l~~kTvilvTh~~~~l~~~D~i~vl~~G~i~~~G~~~el~ 856 (1479)
|++||||++++|++++||||+|+||+++++.+. +++..+.+++|+|++||+++.+..+|+|++|++|++++.|+++|++
T Consensus 485 rv~lAral~~~p~illlDEpts~LD~~~~~~i~-~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~el~ 563 (578)
T 4a82_A 485 RLSIARIFLNNPPILILDEATSALDLESESIIQ-EALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELI 563 (578)
T ss_dssp HHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHH-HHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHH
T ss_conf 999999997499999997865457999999999-9999980899799983178999719989999899899988899998
Q ss_pred HCCCCHHHHHH
Q ss_conf 11764689999
Q 000463 857 NSGMDFGALVA 867 (1479)
Q Consensus 857 ~~~~~f~~l~~ 867 (1479)
+.++.|.++..
T Consensus 564 ~~~~~~~~~~~ 574 (578)
T 4a82_A 564 AKQGAYEHLYS 574 (578)
T ss_dssp HTTSHHHHHHT
T ss_pred HCCCHHHHHHH
T ss_conf 58838999998
No 8
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=651.53 Aligned_cols=538 Identities=20% Similarity=0.262 Sum_probs=452.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCCHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999998234599999999999999885321100001345577788-894054-78988887899999999999999
Q 000463 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMS-FNPSLF-IGVYGSTAVLSMVILVVRAYFVT 1012 (1479)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~~~-~~~~~~-~~vy~~l~~~~~~~~~~~~~~~~ 1012 (1479)
++.++.|++..++ .+.+.+++.++..+.....++++.++.+...... .....+ ...+.++.++..++.+++.+...
T Consensus 13 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (582)
T 3b60_A 13 FRRLWPTIAPFKA--GLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCIS 90 (582)
T ss_dssp HHHHHHHHGGGHH--HHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999--99999999999999999999999999998843686579999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999997814875201025701368988303667433557999999999999999999999875779999
Q 000463 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1479)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~~ 1092 (1479)
+.+.+...+++.++++++++.|++||+++++|++++|+++|++.++..+...+..++...+.+++.+++++..+|++.++
T Consensus 91 ~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 170 (582)
T 3b60_A 91 WVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSII 170 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999980999997889865899999987999999999999999999999999999999980999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999873201599999954019999971728899999999999776559999857679
Q 000463 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1479)
Q Consensus 1093 ~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1479)
++..++++..+..++.+..++..+......++..+++.|+++|+++||+|+.++.+.+++.+..+...+..........|
T Consensus 171 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3b60_A 171 LVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSI 250 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999619999983768999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC
Q ss_conf 99999999999999999999-98606775856899999999999999999999999999986369999985038500000
Q 000463 1173 LGFRLELLGSFTFCLATLFM-ILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1479)
Q Consensus 1173 l~~~l~~l~~~~~~~~~~~~-~~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~ 1251 (1479)
.....+++..+...+..++. ..+..+.++.|.+...+.|...+..++..+...+..++....+.+|+.++.+.++|.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 330 (582)
T 3b60_A 251 SDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDE 330 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999984999899999999999999999999999999999999999999999759987667
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 13699999999997317999535563599995122113898389299999799998889999985057898628999697
Q 000463 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI 1331 (1479)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~isl~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1331 (1479)
. +.+.++..+.|+++|++++|+++..++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||.
T Consensus 331 ---~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b60_A 331 ---G--KRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGH 405 (582)
T ss_dssp ---C--CBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTE
T ss_pred ---C--CCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCE
T ss_conf ---7--77777888847999889973999974415615997699989998999998999999986106898976979999
Q ss_pred ECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCHH
Q ss_conf 369989566610017873766546665766059999--999999999999849538997194875300018999889059
Q 000463 1332 DISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1332 dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~--~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
|+++++.+++|++++++||+|.+|++|+|||+.... +.++++++++++.++++++++.+|+||||.++|+|.+|||||
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq 485 (582)
T 3b60_A 406 DLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQ 485 (582)
T ss_dssp ETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHH
T ss_pred ECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf 82306999999608088068747787899998545999989999999999849799998450411451147988789999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCC
Q ss_conf 9999999986169978998378999999859999999998737947899715913563019799980999
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1410 rQll~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~ 1479 (1479)
|||++||||++++|+|++||||||++|+++++.+++.|++..+++|+|+||||++++..||+|++|++|+
T Consensus 486 ~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~ 555 (582)
T 3b60_A 486 RQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGI 555 (582)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCE
T ss_conf 9999999999728998999786555798999999999999967997999945477898599899997888
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=649.38 Aligned_cols=538 Identities=20% Similarity=0.278 Sum_probs=452.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCCHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999982345999999999999998853211000013455777-888940547-8988887899999999999999
Q 000463 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHS-MSFNPSLFI-GVYGSTAVLSMVILVVRAYFVT 1012 (1479)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~-~~~~~~~~~-~vy~~l~~~~~~~~~~~~~~~~ 1012 (1479)
++.++.|++..++. +.+.+++.++..+.....++++.++.+.... .......++ ..+.++.++..++.+.+.+...
T Consensus 13 ~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (582)
T 3b5x_A 13 FKRLWTYIRLYKAG--LVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCLS 90 (582)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998899999--9999999999999999999999999999864686679999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999997814875201025701368988303667433557999999999999999999999875779999
Q 000463 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1479)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~~ 1092 (1479)
..+.+...+++.++++++++.|++||+++++|++++|+++|++.++..+...+..++...+.+++.+++++..+|.+.++
T Consensus 91 ~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 170 (582)
T 3b5x_A 91 WVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLV 170 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999986999997789878999999988999999999999999999999999999999982999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999873201599999954019999971728899999999999776559999857679
Q 000463 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1479)
Q Consensus 1093 ~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1479)
++..+++++.+..++.+..++..+......+...+++.|+++|+++||+|+.++.+.+++.+..+...+..........|
T Consensus 171 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3b5x_A 171 LIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSI 250 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999519999970875999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC
Q ss_conf 9999999999999999999-998606775856899999999999999999999999999986369999985038500000
Q 000463 1173 LGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1479)
Q Consensus 1173 l~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~ 1251 (1479)
.....+++..+...+..++ ...+..+.+++|.+...+.|...+..++..+...+..++....+.+|+.++.+.++|.+.
T Consensus 251 ~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 330 (582)
T 3b5x_A 251 ADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDN 330 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999985998899999999999999999999999999999999999999999758976777
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 13699999999997317999535563599995122113898389299999799998889999985057898628999697
Q 000463 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI 1331 (1479)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~isl~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1331 (1479)
. +.+.++..|.|+++|++++|+++.+++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||.
T Consensus 331 ---~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b5x_A 331 ---G--KYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGH 405 (582)
T ss_pred ---C--CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf ---7--77777788828999989972899865400416998799989998999997999999996577899987989999
Q ss_pred ECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCHH
Q ss_conf 369989566610017873766546665766059999--999999999999849538997194875300018999889059
Q 000463 1332 DISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1479)
Q Consensus 1332 dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~--~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1479)
|+.+++.+++|++++++||+|.+|++|+|||+.... +.++++++++++.++++++++.+|+||||.++|+|.+|||||
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq 485 (582)
T 3b5x_A 406 DVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQ 485 (582)
T ss_pred EHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHH
T ss_conf 85638899996485898279905310299998566889999999999999879899998476533451068888479999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCC
Q ss_conf 9999999986169978998378999999859999999998737947899715913563019799980999
Q 000463 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1410 rQll~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~ 1479 (1479)
|||++||||++++|+|++||||||++|+++++.|++.|++..+++|+|+||||++++..||+|++|++|+
T Consensus 486 ~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~ 555 (582)
T 3b5x_A 486 RQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGE 555 (582)
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCE
T ss_conf 9999999999749999999785446899999999999999728998999936889998199899998998
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=642.19 Aligned_cols=538 Identities=20% Similarity=0.248 Sum_probs=438.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCC----CCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999982345999999999999998853211000013455777-8889----40547898888789999999999999
Q 000463 937 VYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHS-MSFN----PSLFIGVYGSTAVLSMVILVVRAYFV 1011 (1479)
Q Consensus 937 ~y~~y~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wl~~~~~~~~~-~~~~----~~~~~~vy~~l~~~~~~~~~~~~~~~ 1011 (1479)
.++.|++...+ .+.+.+++.++..+.....++++....+.... ...+ ...+..+++++.++..++.+.+.+..
T Consensus 9 ~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (595)
T 2yl4_A 9 KLLGLAYPERR--RLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLM 86 (595)
T ss_dssp HHHHHHGGGHH--HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999887899--9999999999999999999999999999997357402667999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999781487520102570136898830366743355799999999999999999999987577999
Q 000463 1012 THVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIF 1091 (1479)
Q Consensus 1012 ~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~ 1091 (1479)
...+.+...+++.++++++++.|++||+++++|++++|+++|++.++..+...+..++...+.+++.+++++.++|.+.+
T Consensus 87 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 166 (595)
T 2yl4_A 87 QTSGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLAT 166 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998199999777984889999999999999999999999999999999999999998199999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999987320159999995401999997172889999999999977655999985767
Q 000463 1092 LVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNE 1171 (1479)
Q Consensus 1092 ~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1171 (1479)
+++..+++...+..++.+..++..+......+...+++.|+++|+.+||+|+.++.+.+++.+..+...+..........
T Consensus 167 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (595)
T 2yl4_A 167 FVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARA 246 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999811999998375699999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999999999999999999-99860677585689999999999999999999999999998636999998503850000
Q 000463 1172 WLGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAA 1250 (1479)
Q Consensus 1172 wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~ 1250 (1479)
|......++..+......++ ...+..+.+++|.+...+.|...+..++..+...+..+.....+.+|+.++.+.++|.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 326 (595)
T 2yl4_A 247 GFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLP 326 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999998699789999999999999999999999999999999999999999983897667
Q ss_pred CCCCCCCCCCCCCCCCC-EEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 01369999999999731-7999535563599-995122113898389299999799998889999985057898628999
Q 000463 1251 WKMEDRLPPPNWPAHGN-VDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIII 1328 (1479)
Q Consensus 1251 ~~~~~~~~~~~wp~~g~-I~~~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~I 1328 (1479)
.. ...++ ..+..|. |+++|++++|+++ ..++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+
T Consensus 327 ~~--~~~~~-~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~ 403 (595)
T 2yl4_A 327 FN--EGVIL-NEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISL 403 (595)
T ss_dssp SS--CSBCC-CTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEE
T ss_pred CC--CCCCC-CCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 77--78777-7678998389998899858998881201127998499889998999997999999982585789837999
Q ss_pred CCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC----CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 697369989566610017873766546665766059999----9999999999998495389971948753000189998
Q 000463 1329 DGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG----QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN 1404 (1479)
Q Consensus 1329 DG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~----~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1404 (1479)
||.|+++++.+++|+++++|||+|.+|++|+++|+.... ..++++++++++.+++++++.++|+|+|+.++|+|.+
T Consensus 404 ~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~ 483 (595)
T 2yl4_A 404 DGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVL 483 (595)
T ss_dssp TTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCC
T ss_pred CCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99981117999997322898368832687799998405877665689999999998697999974732013501688786
Q ss_pred CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCC
Q ss_conf 890599999999986169978998378999999859999999998737947899715913563019799980999
Q 000463 1405 WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGL 1479 (1479)
Q Consensus 1405 LSgGQrQll~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~ 1479 (1479)
||||||||++||||++++|+|++||||||++|+++++.+++.|++..+++|+|+||||++++..||+|++|++|+
T Consensus 484 LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~ 558 (595)
T 2yl4_A 484 LSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGK 558 (595)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCE
T ss_conf 899999999999999759999999886668998999999999999965997999946878997599899998998
Done!