Your job contains 1 sequence.
>000469
MSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWT
FVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYD
EKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSY
ENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDM
QFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRA
YADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKD
FMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFW
RPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNA
ASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTP
IERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLS
NKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEA
CQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAM
KLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQ
LSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALG
NRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFL
DVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTV
LQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLS
LYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELAL
LLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGGDIDRQRMIVT
PMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQIN
LVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLENQRKSELKKFQ
LCFSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLLNSATAVLERAAEE
KSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQLI
TLLLLLTEHVLNVILIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLSGKLIPILERL
ELLGEDKVGRDLKVFRRLVTSLKEMTIQKLAL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000469
(1472 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2176197 - symbol:EMB3142 "EMBRYO DEFECTIVE 314... 3949 0. 2
UNIPROTKB|F1N1V3 - symbol:NUP205 "Uncharacterized protein... 308 8.3e-43 3
RGD|1309413 - symbol:Nup205 "nucleoporin 205" species:101... 309 9.0e-42 3
UNIPROTKB|J9P7I1 - symbol:NUP205 "Uncharacterized protein... 315 1.4e-41 3
UNIPROTKB|Q92621 - symbol:NUP205 "Nuclear pore complex pr... 289 1.5e-40 2
UNIPROTKB|F1PZ99 - symbol:NUP205 "Uncharacterized protein... 300 5.4e-40 3
UNIPROTKB|E1BV83 - symbol:NUP205 "Uncharacterized protein... 268 3.1e-36 3
ZFIN|ZDB-GENE-040715-8 - symbol:nup205 "nucleoporin 205" ... 195 5.0e-32 5
UNIPROTKB|I3LC31 - symbol:NUP205 "Uncharacterized protein... 203 3.4e-12 1
FB|FBgn0031078 - symbol:Nup205 "Nucleoporin 205kD" specie... 145 1.3e-09 4
>TAIR|locus:2176197 [details] [associations]
symbol:EMB3142 "EMBRYO DEFECTIVE 3142" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
InterPro:IPR021827 Pfam:PF11894 EMBL:CP002688 GO:GO:0009507
GO:GO:0005635 KO:K14310 IPI:IPI00531972 RefSeq:NP_199933.5
UniGene:At.29691 PRIDE:F4KBW6 EnsemblPlants:AT5G51200.1
GeneID:835195 KEGG:ath:AT5G51200 OMA:KRRYIAM Uniprot:F4KBW6
Length = 1838
Score = 3949 (1395.2 bits), Expect = 0., Sum P(2) = 0.
Identities = 798/1239 (64%), Positives = 969/1239 (78%)
Query: 234 AGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDXXXXXXXXXXXXYDHVF 293
+ QVYDMQFELNE+EARREQYPSTISFLNL+NALIA EKDV+D
Sbjct: 633 SSQVYDMQFELNEVEARREQYPSTISFLNLINALIAGEKDVNDRG--------------- 677
Query: 294 GPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLT--QSSPIQMQ 351
+RAY+DPCEKWQLVVACL+HFHMIL+MYDIQEED+D E L ++S +Q Q
Sbjct: 678 ----RRAYSDPCEKWQLVVACLQHFHMILSMYDIQEEDLDGFTEHPHFLVSLETSSLQTQ 733
Query: 352 LPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFE 411
LP++ELLKDFMSGKA++RN+MGILQ GV+SII+ER ++ YG +LEKAVQLSLEI++LVFE
Sbjct: 734 LPIIELLKDFMSGKALYRNLMGILQVGVNSIISERLSKTYGKILEKAVQLSLEILLLVFE 793
Query: 412 KDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILS-SRMVG 470
KDLL+SD WRPLYQP+D+ILSQDHNQI+ALLEYVRYD LPQIQ+ SIKIM+IL SR+VG
Sbjct: 794 KDLLVSDVWRPLYQPLDIILSQDHNQIIALLEYVRYDSLPQIQRSSIKIMNILRCSRLVG 853
Query: 471 LVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITH 530
LV +L+K +AA+SL+EDYAACLE R EE +++E S DD GVLIMQLL+DNI+RPAP+ITH
Sbjct: 854 LVPMLIKIDAANSLIEDYAACLEGRLEEGEVVENSCDDLGVLIMQLLVDNINRPAPSITH 913
Query: 531 LLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPL 590
LLLKFDLD P+E TVLQPKFHYSCLK+ILE+LEK+ PD+N LL EFGFQLL EL LDPL
Sbjct: 914 LLLKFDLDAPVEGTVLQPKFHYSCLKVILEMLEKLPNPDINFLLFEFGFQLLCELNLDPL 973
Query: 591 TCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAG 650
T GPTMDLLS+KKYQFF++HLD IGVA LPKR+ +QALRISSLHQRAWLLKLLAI LH G
Sbjct: 974 TSGPTMDLLSSKKYQFFLQHLDTIGVATLPKRSGSQALRISSLHQRAWLLKLLAIALHTG 1033
Query: 651 YGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEV 710
GSSS H EACQ+IL+HLFGR+ E + S Q+ ++AGT +ISKSK L LLE+
Sbjct: 1034 SGSSSAHLEACQSILSHLFGREVTEAANEPFSSSTYPQDGLDYAGTSSISKSKALALLEI 1093
Query: 711 VQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKL 770
+QFRSPD +M+L QIVS++KYD L E+ILGN TS G IYYYSERGDRLIDLSSFS+KL
Sbjct: 1094 LQFRSPDASMQLPQIVSSLKYDSLVEDILGNRDTSVSGSIYYYSERGDRLIDLSSFSNKL 1153
Query: 771 WKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEV 830
W+KL+ +P + +F + AEL++V+E IQQLL+WGWKYN+NLEEQAAQLHML GWSQ+VEV
Sbjct: 1154 WQKLHSGFPLVDSFPNVAELSEVRETIQQLLKWGWKYNRNLEEQAAQLHMLAGWSQIVEV 1213
Query: 831 SVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPG 890
S RRIS+L NRSEILY+ILDA L ASASPDCSL+MAF+L QVALTC+AKLRD++F G
Sbjct: 1214 SACRRISSLDNRSEILYRILDASLSASASPDCSLKMAFVLTQVALTCIAKLRDDRFSFQG 1273
Query: 891 GLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQH 950
L+SD+VT LDV+MVK LS GACHS+LFKL+MAILR+ESSE+LRRRQYALLLSYFQYCQH
Sbjct: 1274 ALSSDTVTCLDVMMVKHLSTGACHSVLFKLVMAILRHESSESLRRRQYALLLSYFQYCQH 1333
Query: 951 MLAPDVPTTVXXXXXXXXXXXXXXXXXKIDKEQAELTHANFSTLRKEAQAILDLFIKDAT 1010
M+A DVPT+V KIDKEQA+L ANF ++KEAQ ILDL IKDA+
Sbjct: 1334 MIALDVPTSVVQFLLLNEQDGEDLDIQKIDKEQADLARANFFIIKKEAQGILDLVIKDAS 1393
Query: 1011 QGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQR 1070
QGSE GKT+SLYVL+AL+CIDHE+YFL+QLQSRGF+RSCL ++SN+SYQDG L++ QR
Sbjct: 1394 QGSEFGKTISLYVLEALVCIDHERYFLSQLQSRGFIRSCLGSISNISYQDGTHLLESQQR 1453
Query: 1071 ACTXXXXXXXXXRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGG 1130
ACT RISHKYGKSG QVLFSMG+LEHIASC+A+ +G++RRV K + +G
Sbjct: 1454 ACTLEAELALLLRISHKYGKSGGQVLFSMGALEHIASCRAISFKGNMRRVDMKLQSDVGY 1513
Query: 1131 DIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISE 1190
++ +QR I+T +LRLVF+LTSLV+TS+FFE +NK+VR+V++FIKGHQ L DQ+L+E+ ++
Sbjct: 1514 NVQKQRTIITAVLRLVFALTSLVETSEFFEGRNKIVRDVVEFIKGHQSLFDQLLREDFTQ 1573
Query: 1191 ADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLEN 1250
AD+L MEQI L VGILSKVWP+EE+D YGFVQGLF MMS LF + +S+ +
Sbjct: 1574 ADDLLMEQIILAVGILSKVWPFEENDGYGFVQGLFDMMSKLF--------IASPIKSILS 1625
Query: 1251 QRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNXXXXXXXXXXXXXXXXXXXX 1310
Q SELK QL FSL+SYLYF+VTK SLRLQVS D +
Sbjct: 1626 QG-SELKLSQLRFSLTSYLYFLVTKNSLRLQVSD--DSLDSSTKLRQPTLLLLASLLSHV 1682
Query: 1311 XXVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMC 1370
LERAAE+KSLLL+KIRDINELSRQ+VD +I +C ++YV+ SDNI KRRY+AMVEMC
Sbjct: 1683 TDSLERAAEKKSLLLHKIRDINELSRQDVDAIIKICDSQEYVTPSDNIHKRRYIAMVEMC 1742
Query: 1371 QVAGNRDQXXXXXXXXXXXXXXXXXIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLS 1430
Q+ GNRDQ IH QD S+ +S+E +YG+KS Q+++ L
Sbjct: 1743 QIVGNRDQLITLLLQLAEHVLNIILIHLQDRSV--SSNERG---SYGSKSHIQQEVTDLC 1797
Query: 1431 GKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQK 1469
GKL P ++RL LL E KVG +LKVF+RL T++KEM IQK
Sbjct: 1798 GKLSPTIDRLALLNEGKVGHNLKVFQRLATTVKEMAIQK 1836
Score = 1002 (357.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 201/276 (72%), Positives = 231/276 (83%)
Query: 1 MSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWT 60
MSVLNSYR + D + D ++ +++ PLPF+SL+EF KEPELLSGNDVLWT
Sbjct: 414 MSVLNSYRTS---DPL-DGSMQTEESDR--PLPFISLMEF------KEPELLSGNDVLWT 461
Query: 61 FVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYD 120
FV FAGEDHTNF+TLVAFL+ML TLAS+QEGASKVYELL+G +FRSIGW TLFDC+ IYD
Sbjct: 462 FVNFAGEDHTNFKTLVAFLEMLCTLASTQEGASKVYELLRGTSFRSIGWPTLFDCIRIYD 521
Query: 121 EKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSY 180
EKFKQSLQT GA++P+F EGDAKALVAYLNVLQKV+ENGN ERKNWFPDIEP FKLL Y
Sbjct: 522 EKFKQSLQTAGAMMPEFLEGDAKALVAYLNVLQKVVENGNPTERKNWFPDIEPFFKLLGY 581
Query: 181 ENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDM 240
EN+PPYLKGALR IAA ++V M+D+IW LEQYDLPVVVG+ VG + Q + QVYDM
Sbjct: 582 ENIPPYLKGALRKTIAAFVNVFPEMRDSIWAFLEQYDLPVVVGSQVGKSDQ--SSQVYDM 639
Query: 241 QFELNEIEARREQYPSTISFLNLLNALIAEEKDVSD 276
QFELNE+EARREQYPSTISFLNL+NALIA EKDV+D
Sbjct: 640 QFELNEVEARREQYPSTISFLNLINALIAGEKDVND 675
>UNIPROTKB|F1N1V3 [details] [associations]
symbol:NUP205 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005643 "nuclear pore" evidence=IEA] InterPro:IPR021827
Pfam:PF11894 KO:K14310 GeneTree:ENSGT00390000004003 CTD:23165
OMA:AVCLFTP EMBL:DAAA02011639 EMBL:DAAA02011640 IPI:IPI00707673
RefSeq:NP_001124403.1 UniGene:Bt.8231 Ensembl:ENSBTAT00000044609
GeneID:520924 KEGG:bta:520924 NextBio:20873200 Uniprot:F1N1V3
Length = 2012
Score = 308 (113.5 bits), Expect = 8.3e-43, Sum P(3) = 8.3e-43
Identities = 194/819 (23%), Positives = 344/819 (42%)
Query: 456 CSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLE-------LRSEESQIIEK--SG 506
C I S + ++VG + + L+ + CL+ +R EE +EK +G
Sbjct: 921 CCISCNSNIQIKLVG--DFTHDQSVSQKLMAGFVECLDSEDTEEFVRLEEGSELEKKLAG 978
Query: 507 --DDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQ-PKF---HYSCLKIILE 560
+ + I+ LLI ++ R PN+ LL F+L P+ T LQ P +CL IL
Sbjct: 979 IRHETRIHILNLLITSLERNPPNLALYLLGFELKKPVSTTNLQDPGVLGCPRTCLHAILN 1038
Query: 561 ILEKVSKPDVNAL-------LHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDA 613
ILEK ++ L L E +Q++Y+LC T GPTM L + F L
Sbjct: 1039 ILEKGTEGRTGPLAVKESPQLAELCYQVIYQLCACSDTSGPTMRYLRTSQ-DFLFSQLQH 1097
Query: 614 IGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLF---- 669
+ P SN+ IS L+Q +WL+K +IEL +S Q + L HL
Sbjct: 1098 L---PF----SNKEYEISMLNQMSWLMKTASIELRV---TSLNRQRSHTQRLLHLLLDDM 1147
Query: 670 -------GRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKL 722
G +ED +R++S F+ H T T + K+L +L+ + F + ++
Sbjct: 1148 PVKPYSDGEGGMEDENRSVS-GFL------HFDTSTKVRRKILNILDSIDF-----SQEI 1195
Query: 723 SQIVSNMKYDLLA-EEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQL 781
+ + +D E+++ N + + RG + ++ L ++N + +
Sbjct: 1196 PEPLQLDFFDRAQIEQVIAN--------CEHKNLRGQTVCNVKLLHRVLVAEVNALQG-M 1246
Query: 782 SNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVS---RRISA 838
+ G L D I +L++ NK L+ A+ H L W Q+VE+ ++ + +
Sbjct: 1247 AAIGQRPLLMD---EISTILQYVVGRNKLLQCLHAKRHALESWRQLVEIILTACPQDLIQ 1303
Query: 839 LGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKL----RDEK----FLCPG 890
+R I+ +L + + + ++ T A L R E+ L PG
Sbjct: 1304 AEDRQLIIRDLLQDVHDKILDDEAAQELMPVVAGAVFTLTAHLSQAVRTEQKQPLVLGPG 1363
Query: 891 GLNS----DSV------TFLDVIMVKQLSNGACHSLLFKLIMAILRNESS-EALRRRQYA 939
++ DS T ++ + + + H +L KL+ IL+ + +R Y
Sbjct: 1364 EVHCAFSLDSSFTSPPPTENPLVGFASIGDSSLHIILKKLLDFILKTGGGFQRVRTHLYG 1423
Query: 940 LLLSYFQYCQHMLAPDVPTTVXXXXXXXXXXXXXXXXXKIDKEQAELTHANFSTLRKEAQ 999
LL Y Q Q PD P T+ K Q E N + +
Sbjct: 1424 SLLYYLQIAQR---PDEPDTLEVAKKTMWERLTAPEDV-FSKLQRE----NIAIIESYGA 1475
Query: 1000 AILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQ 1059
A++++ +DA G E G+ L+L +LD ++ +D ++ +L L + G+L+ L++ S V
Sbjct: 1476 ALMEVVCRDACDGHEIGRMLALALLDRIVSVDKQQQWLLYLSNSGYLK-VLVD-SLVEDD 1533
Query: 1060 DGKRSLDT-----LQRACTXXXXXXXXXRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQ 1114
+SL T L+ T R++ K + GA L G + +A C+ ++
Sbjct: 1534 RTLQSLLTPQPPLLKALYTYESKMAFLTRVA-KI-QQGALELLRSGVIVRLAQCQVYDMR 1591
Query: 1115 GSLRRVAT----KPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVM 1170
+ P + DR R I+ P LRL ++ TS + + +V+
Sbjct: 1592 PEMDPQGVFGMRDPPVFIPTPGDRYRQILLPALRLC----QVILTSSMAQ-HLQAAGQVL 1646
Query: 1171 DFIKGHQLLVDQVLQ-ENISEADELTMEQINLVVGILSK 1208
F+ H + +L+ ++IS +++++ L+ GI+SK
Sbjct: 1647 QFLISHSDTIQAILRCQDISAG---SLQELALLTGIISK 1682
Score = 250 (93.1 bits), Expect = 8.3e-43, Sum P(3) = 8.3e-43
Identities = 129/528 (24%), Positives = 223/528 (42%)
Query: 31 PLPFVSLL-EFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQ 89
PL ++L ++ +Q+ P+ VL FV G D + +LKML LA+
Sbjct: 469 PLQTSTILGSYLGVAHQRPPQR---QVVLSKFVRQMG-DLLPPTIYIPYLKMLQGLANGP 524
Query: 90 EGASKVYELL-----------QGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGAL----L 134
+ A + LL QG + W F L +Y E ++ L + ++ L
Sbjct: 525 QCAHYCFSLLKVNGSSHVENIQGAGGSPVSWEHFFHSLMLYHEHLRKDLPSADSVQYRHL 584
Query: 135 PD--FQEGDAKALVAYLNVLQKVM---ENGNSI--ERKNWFPDIEPLFKLLSYENVPPYL 187
P + + L+A+L + ++ EN E W P + + LL ++PP L
Sbjct: 585 PSRGITQKEQDGLIAFLQLTSTIITWSENARLALCEHPQWTP-VVVILGLLQC-SIPPVL 642
Query: 188 KGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQ-PIAGQVYDMQFELNE 246
K L +AA S + ++W+ LE Y T + T + P Q ++ ELNE
Sbjct: 643 KAELLKTLAA-FGKSPEIAASLWQSLE-Y-------TQILQTVRVPSQRQAIGIEVELNE 693
Query: 247 IEARREQYPSTISFLNLLNALIAEEKDVSDXXXXXXXXXXXXY-----DHVFGPFPQRAY 301
IE+R E+YP T +F L++ L+ E S+ Y D VF F RAY
Sbjct: 694 IESRCEEYPLTRAFCQLISILV-ESSFPSNLGAGLRPPGFDPYLQFLRDSVFLRFRTRAY 752
Query: 302 ADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDF 361
EKW++ L+ F+ +L Y+ Q ED V+Q L I + P L+
Sbjct: 753 RRAAEKWEVAEVVLEVFYKLLRDYEPQLEDF---VDQFVELQGEEIIAYKPPGFSLMYHL 809
Query: 362 MSGKAVFRNIMGILQPGVDSIITERNNQIYGPL-----LEKAVQLSLEIVILVFEKDLLL 416
++ + + +L+ GV + T Y P LEKAVQ L ++ L +K+ L
Sbjct: 810 LNESPMLELALSLLEEGVKQLDT------YAPFPGKKHLEKAVQHCLALLNLTLQKENLF 863
Query: 417 SDFWRP-----LYQPVDVIL------SQDHNQIVALLEYVRY-DFLPQIQQCSIKIMSIL 464
D R + P++ +L ++ + +V + Y+ + + P++ S KI+ +
Sbjct: 864 MDLLRESQLALIVSPLEQLLQGINPRTKKADNVVNIARYLYHGNTNPELAFESAKILCCI 923
Query: 465 SSRMVGLVQLLLKY----NAASSLVEDYAACLELRSEESQIIEKSGDD 508
S ++L+ + + + L+ + CL+ E + + G +
Sbjct: 924 SCNSNIQIKLVGDFTHDQSVSQKLMAGFVECLDSEDTEEFVRLEEGSE 971
Score = 54 (24.1 bits), Expect = 8.3e-43, Sum P(3) = 8.3e-43
Identities = 22/81 (27%), Positives = 35/81 (43%)
Query: 1144 RLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVV 1203
R +F L D+ F N R + + H +DQ+L + IS E +++ +
Sbjct: 1928 RSLFKSRRLQDS--FASESNLDFRSGLTTVSQHD--IDQLLADAISAFGESLQKKLLDIE 1983
Query: 1204 GILSKVWPYEESDEYGFVQGL 1224
G+ SKV Y F+Q L
Sbjct: 1984 GLYSKV-----RSRYSFIQAL 1999
Score = 43 (20.2 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 1325 LNKIRDINELSRQEVDEVIN--MCVREDYVSSSDN--IQKRRYVAMV 1367
+NK++++ +L E+ E+ M D +S++ + +RR V ++
Sbjct: 1837 VNKLQNVEQLPPDEIKELCQSVMPAGVDKISTAQKYVLARRRLVKLI 1883
>RGD|1309413 [details] [associations]
symbol:Nup205 "nucleoporin 205" species:10116 "Rattus
norvegicus" [GO:0005643 "nuclear pore" evidence=IEA;ISO]
[GO:0015288 "porin activity" evidence=IEA] [GO:0017056 "structural
constituent of nuclear pore" evidence=ISO] [GO:0031965 "nuclear
membrane" evidence=ISO] [GO:0034399 "nuclear periphery"
evidence=ISO] [GO:0051292 "nuclear pore complex assembly"
evidence=ISO] InterPro:IPR021827 Pfam:PF11894 RGD:1309413
EMBL:CH473959 GO:GO:0015288 GO:GO:0046930 KO:K14310
GeneTree:ENSGT00390000004003 CTD:23165 OrthoDB:EOG4XKV62
IPI:IPI00870660 RefSeq:NP_001102090.1 UniGene:Rn.23694
Ensembl:ENSRNOT00000014832 GeneID:362335 KEGG:rno:362335
UCSC:RGD:1309413 NextBio:679543 Uniprot:D4A7R3
Length = 2008
Score = 309 (113.8 bits), Expect = 9.0e-42, Sum P(3) = 9.0e-42
Identities = 186/814 (22%), Positives = 335/814 (41%)
Query: 456 CSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLE-------LRSEESQIIEKS--- 505
C I S + +MVG N + L+ + CL+ +R EE +EK
Sbjct: 921 CCISCNSNIQIKMVG--DFTHDQNVSQKLMAGFVECLDSEDTEEFVRVEEGSELEKKLAA 978
Query: 506 -GDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQ-PKF---HYSCLKIILE 560
+ + I+ LLI ++ R PN+ LL F+L PI T LQ P +CL IL
Sbjct: 979 IRHETRIHILNLLITSLERSPPNLALYLLGFELKKPISTTNLQDPGVLGCPRTCLHAILN 1038
Query: 561 ILEKV----SKP-DVNAL--LHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDA 613
ILEK S P V A L E +Q++Y+LC T GPTM L + F L
Sbjct: 1039 ILEKGTDGRSGPVAVQACPQLAELCYQVIYQLCACSDTSGPTMRYLRTSQ-DFLFSQLQH 1097
Query: 614 IGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHA-GYGSSSTH-QEACQTILAHL--- 668
+ P SN+ IS L+Q +WL+K +IEL +H Q +L L
Sbjct: 1098 L---PF----SNKEYEISMLNQMSWLMKTASIELRVTSLNRQRSHTQRLLHLLLDDLPVK 1150
Query: 669 ---FGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQI 725
G +ED +R++S F+ H T T + K+L +L+ + F + ++ +
Sbjct: 1151 PYSDGEGGMEDENRSVS-GFL------HFDTATKVRRKILSILDSIDF-----SQEIPEP 1198
Query: 726 VSNMKYDLLA-EEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNF 784
+ +D E+++ N + + +G + ++ L ++N + ++
Sbjct: 1199 LQLDFFDRAQIEQVIAN--------CEHKNLQGQTVCNVKLLHRVLVAEVNALQG-MAAI 1249
Query: 785 GSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVS---RRISALGN 841
G L E I +L++ NK L+ A+ H L W Q+VE+ ++ + + +
Sbjct: 1250 GQRPLL---MEEISTILQYVVGRNKLLQCLHAKRHALESWRQLVEIILTACPQELIQAED 1306
Query: 842 RSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKL----RDEK------------ 885
R I+ IL + + + ++ T A L R E+
Sbjct: 1307 RQLIIRDILQDVHDKVLDDEAAQELMPVVAGAVFTLTAHLSQAVRTEQKQPLVSGPAEAH 1366
Query: 886 --FLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESS-EALRRRQYALLL 942
F+ S + + + + H +L KL+ IL+ + +R Y LL
Sbjct: 1367 YAFMLDSSFTSAPAAESQPVGFASIGDSSLHIILKKLLDFILKTGGGFQRVRTHLYGSLL 1426
Query: 943 SYFQYCQHMLAPDVPTTVXXXXXXXXXXXXXXXXXKIDKEQAELTHANFSTLRKEAQAIL 1002
Y Q Q PD P T+ K Q E N + + A++
Sbjct: 1427 YYLQIAQR---PDEPDTLEAAKKTMWERLTAPEDV-FSKLQRE----NMAIIESYGAALM 1478
Query: 1003 DLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNV--SNVSYQD 1060
++ +DA G E G+ L+L +LD ++ +D ++ +L L + G+L+ + ++ + + Q
Sbjct: 1479 EVVCRDACDGHEIGRMLALALLDRIVSVDKQQQWLLYLSNSGYLKVLVDSLLEDDRTLQS 1538
Query: 1061 GKRSLDTLQRAC-TXXXXXXXXXRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRR 1119
L +A T R++ + G+ L G + +A C+ ++ +
Sbjct: 1539 LLTPQPPLLKALYTYESKMAFLTRVAKL--QQGSLELLRSGVIVRLAQCQVYDMRPEVDS 1596
Query: 1120 VAT----KPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKG 1175
+ P + +DR R I+ P L+L ++ TS + + +V+ F+
Sbjct: 1597 HSMFGMRDPPIFIPTPVDRYRQILLPALQLC----QVILTSSMSQ-HLQAAGQVLQFLVS 1651
Query: 1176 HQLLVDQVLQ-ENISEADELTMEQINLVVGILSK 1208
H + +L+ +++S +++++ L+ GI+SK
Sbjct: 1652 HSDTIQAILRCQDVSAG---SLQELALLTGIISK 1682
Score = 252 (93.8 bits), Expect = 9.0e-42, Sum P(3) = 9.0e-42
Identities = 118/482 (24%), Positives = 205/482 (42%)
Query: 76 VAFLKMLSTLASSQEGASKVYELL-----------QGKAFRSIGWRTLFDCLSIYDEKFK 124
+ +LKML LA+ + A + LL QG + W F L +Y E +
Sbjct: 511 IPYLKMLQGLANGPQCAHYCFSLLKVNGSSHVENIQGAGGSPVSWEHFFHSLLLYHEHLR 570
Query: 125 QSLQTGGAL----LPD--FQEGDAKALVAYLNVLQKVM---ENGNSI--ERKNWFPDIEP 173
+ L + ++ LP + + L+A+L + ++ EN E W P +
Sbjct: 571 KDLPSADSVQYRHLPSRGITQKEQDGLIAFLQLTSTIITWSENARLALCEHPQWTP-VVV 629
Query: 174 LFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQ-P 232
+ LL ++PP LK L +AA S + ++W+ LE Y T + T + P
Sbjct: 630 ILGLLQC-SIPPALKAELLKTLAA-FGKSPEIAASLWQSLE-Y-------TQILQTVRVP 679
Query: 233 IAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDXXXXXXXXXXXXY--- 289
Q ++ ELNEIE+R E+YP T +F L++ L+ E S+ Y
Sbjct: 680 SQRQAIGIEVELNEIESRCEEYPLTRAFCQLISTLV-ESSFPSNLGAGLRPPGFDPYLQF 738
Query: 290 --DHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSP 347
D VF F RAY EKW++ L+ F+ +L Y+ Q ED V+Q L
Sbjct: 739 LRDSVFLRFRTRAYRRAAEKWEVAEVVLEVFYKLLRDYEPQLEDF---VDQFVELQGEEI 795
Query: 348 IQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPL-----LEKAVQLS 402
I + P L+ ++ + + +L+ GV + T Y P LEKAVQ
Sbjct: 796 IAYKPPGFSLMYHLLNESPMLELALSLLEEGVKQLDT------YAPFPGKKHLEKAVQHC 849
Query: 403 LEIVILVFEKDLLLSDFWRP-----LYQPVDVIL------SQDHNQIVALLEYVRY-DFL 450
L ++ L +K+ L D R + P++ +L ++ + +V + Y+ + +
Sbjct: 850 LALLNLTLQKENLFMDLLRESQLALIVSPLEQLLQGINPRTKKADNVVNIARYLYHGNSN 909
Query: 451 PQIQQCSIKIMSILSSRMVGLVQLLLKY----NAASSLVEDYAACLELRSEESQIIEKSG 506
P++ S KI+ +S ++++ + N + L+ + CL+ E + + G
Sbjct: 910 PELAFESAKILCCISCNSNIQIKMVGDFTHDQNVSQKLMAGFVECLDSEDTEEFVRVEEG 969
Query: 507 DD 508
+
Sbjct: 970 SE 971
Score = 43 (20.2 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 34 FVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGA 92
F SLL + E +K+ L S + V + + G L+AFL++ ST+ + E A
Sbjct: 559 FHSLLLY-HEHLRKD--LPSADSVQYRHLPSRGITQKEQDGLIAFLQLTSTIITWSENA 614
Score = 42 (19.8 bits), Expect = 7.4e-41, Sum P(4) = 7.4e-41
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 1325 LNKIRDINELSRQEVDEVIN--MCVREDYVSSSDN--IQKRRYVAMV 1367
+NK++++ +L E+ E+ M D +S++ + +RR V ++
Sbjct: 1837 VNKLQNVEQLPPDEIKELCQSVMPAGIDKISTAQKCVLARRRLVKLI 1883
Score = 41 (19.5 bits), Expect = 9.0e-42, Sum P(3) = 9.0e-42
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 1180 VDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGL 1224
+DQ+ + I+ E +++ + G+ SKV Y F+Q L
Sbjct: 1956 IDQLQSDAINAFGESLQKKLLDIEGLYSKV-----RSRYSFIQAL 1995
Score = 41 (19.5 bits), Expect = 7.4e-41, Sum P(4) = 7.4e-41
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 1220 FVQGLFGMMSSLFSSDLENLTFSQSARSLENQRKS-----ELKKFQLCFSLSSYLYFMVT 1274
F + G++S SD F ++E R S EL Q+C ++ Y + +
Sbjct: 1711 FQRQCLGLLSRFGGSDRLR-QFKLQEDNVEGDRLSKKDEIELAMQQICANVMEYCHSFMQ 1769
Query: 1275 KKSLRLQ 1281
+ S LQ
Sbjct: 1770 QNSPNLQ 1776
Score = 38 (18.4 bits), Expect = 1.5e-40, Sum P(4) = 1.5e-40
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 1171 DFIKGHQLLVDQVLQENISEADE--LTMEQI 1199
D ++ +L D V + +S+ DE L M+QI
Sbjct: 1726 DRLRQFKLQEDNVEGDRLSKKDEIELAMQQI 1756
>UNIPROTKB|J9P7I1 [details] [associations]
symbol:NUP205 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR021827 Pfam:PF11894 GeneTree:ENSGT00390000004003
OMA:AVCLFTP EMBL:AAEX03010241 EMBL:AAEX03010242
Ensembl:ENSCAFT00000046386 Uniprot:J9P7I1
Length = 2012
Score = 315 (115.9 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
Identities = 195/821 (23%), Positives = 346/821 (42%)
Query: 456 CSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLE-------LRSEESQIIEK--SG 506
C I S + ++VG + + L+ + CL+ +R EE +EK +G
Sbjct: 921 CCISCNSNIQIKLVG--DFTHDQSVSQKLMAGFVECLDSEDTEEFVRLEEGSELEKKLAG 978
Query: 507 --DDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQ-PKF---HYSCLKIILE 560
+ + I+ LLI ++ R PN+ LL F+L P+ T LQ P +CL IL
Sbjct: 979 IRHETRIHILNLLITSLERNPPNLALYLLGFELKKPVSTTNLQDPGVLGCPRTCLHAILN 1038
Query: 561 ILEKVSKPDVNAL-------LHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDA 613
ILEK ++ + L E +Q++Y+LC T GPTM L + F L
Sbjct: 1039 ILEKGTEGRTGPVAVRESPQLAELCYQVIYQLCACADTSGPTMRYLRTSQ-DFLFSQLQH 1097
Query: 614 IGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLF---- 669
+ P SN+ +S L+Q +WL+K +IEL +S Q + L HL
Sbjct: 1098 L---PF----SNKEYEMSMLNQMSWLMKTASIELRV---TSLNRQRSHTQRLLHLLLDDM 1147
Query: 670 -------GRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKL 722
G IED +R++S F+ H T T + K+L +L+ + F + ++
Sbjct: 1148 PVKPYSDGEGGIEDENRSVS-GFL------HFDTTTKVRRKILSILDSIDF-----SQEI 1195
Query: 723 SQIVSNMKYDLLA-EEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQL 781
+ + +D E+++ N + + RG + ++ L ++N + +
Sbjct: 1196 PEPLQLDFFDRTQIEQVIAN--------CEHKNLRGQTVCNVKLLHRVLVAEVNALQG-M 1246
Query: 782 SNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVS---RRISA 838
+ G L E I +L++ NK L+ A+ H+L W Q+VE+ ++ + +
Sbjct: 1247 AAIGQRPLL---MEEISTILQYVVGRNKLLQCLHAKRHVLESWRQLVEIILTACPQDLIQ 1303
Query: 839 LGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKL----RDEK----FLCPG 890
+R I+ IL + + + ++ T A L R E+ L PG
Sbjct: 1304 AEDRQLIIRDILQDVHDKILDDEAAQELMPVVAGAVFTLTAHLSQAVRTEQKQPLVLGPG 1363
Query: 891 GLNS----DSVTFLD-------VIMVKQLSNGACHSLLFKLIMAILRNESS-EALRRRQY 938
+ DS +F ++ + + + H +L KL+ IL+ + +R Y
Sbjct: 1364 ETHYAFMLDS-SFTSPPPAENPMVGFASIGDSSLHIILKKLLDFILKTGGGFQRVRTHLY 1422
Query: 939 ALLLSYFQYCQHMLAPDVPTTVXXXXXXXXXXXXXXXXXKIDKEQAELTHANFSTLRKEA 998
LL Y Q Q PD P T+ K Q E N + +
Sbjct: 1423 GSLLYYLQIAQR---PDEPDTLEAAKKTMWERLTAPEDV-FSKLQRE----NIAIIESYG 1474
Query: 999 QAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSY 1058
A++++ +DA G E G+ L+L +LD ++ +D ++ +L L + G+L+ L++ S V
Sbjct: 1475 AALMEVVCRDACDGHEIGRMLALALLDRIVSVDKQQQWLLYLSNSGYLK-VLVD-SLVED 1532
Query: 1059 QDGKRSLDT-----LQRACTXXXXXXXXXRISHKYGKSGAQVLFSMGSLEHIASCKAVGL 1113
+SL T L+ T R++ K + GA L G + +A C+ +
Sbjct: 1533 DHTLQSLLTPQPPLLKALYTYESKMAFLTRVA-KI-QQGALELLRSGVIVRLAQCQVYDM 1590
Query: 1114 QGSLRRVAT----KPRRALGGDIDRQRMIVTPMLRLV-FSLTSLVDTSDFFEVKNKVVRE 1168
+ + P + +DR R I+ P LRL LTS T+ + +
Sbjct: 1591 RPEMDPQGMFGMRDPPVFIPAPVDRYRQILLPALRLCQVILTS--STAQHLQAAG----Q 1644
Query: 1169 VMDFIKGHQLLVDQVLQ-ENISEADELTMEQINLVVGILSK 1208
V+ F+ H + +L+ +++S +++++ L+ GI+SK
Sbjct: 1645 VLQFLISHSDTIQAILRCQDVSAG---SLQELALLTGIISK 1682
Score = 242 (90.2 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
Identities = 103/379 (27%), Positives = 162/379 (42%)
Query: 76 VAFLKMLSTLASSQEGASKVYELL-----------QGKAFRSIGWRTLFDCLSIYDEKFK 124
+ +LKML LA+ + A + LL QG + W F L +Y E +
Sbjct: 511 IPYLKMLQGLANGPQCAHYCFSLLKVNGSSHVENIQGTGGSPVSWEHFFHSLMLYHEHLR 570
Query: 125 QSLQTGGAL----LPD--FQEGDAKALVAYLNVLQKVM---ENGNSI--ERKNWFPDIEP 173
+ L + ++ LP + + L+A+L + ++ EN E W P +
Sbjct: 571 KDLPSADSVQYRHLPSRGITQKEQDGLIAFLQLTSTIITWSENARLALCEHPQWTP-VVV 629
Query: 174 LFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQ-P 232
+ LL ++PP LK L +AA S + ++W+ LE Y T + T + P
Sbjct: 630 ILGLLQC-SIPPVLKAELLKTLAA-FGKSPEIAASLWQSLE-Y-------TQILQTVRVP 679
Query: 233 IAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDXXXXXXXXXXXXY--- 289
Q ++ ELNEIE+R E+YP T +F L++ L+ E S+ Y
Sbjct: 680 SQRQAIGIEVELNEIESRCEEYPLTRAFCQLISTLV-ESSFPSNLGAGLRPPGFDPYLQF 738
Query: 290 --DHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSP 347
D VF F RAY EKW++ L+ F+ +L Y+ Q ED V+Q L
Sbjct: 739 LRDSVFLRFRTRAYRRAAEKWEVAEVVLEVFYKLLRDYEPQLEDF---VDQFVELQGEEI 795
Query: 348 IQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPL-----LEKAVQLS 402
I + P L+ ++ + + +L+ GV + T Y P LEKAVQ
Sbjct: 796 IAYKPPGFSLMYHLLNESPMLELALSLLEEGVKQLDT------YAPFPGKKHLEKAVQHC 849
Query: 403 LEIVILVFEKDLLLSDFWR 421
L ++ L +K+ L D R
Sbjct: 850 LALLNLTLQKENLFMDLLR 868
Score = 43 (20.2 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
Identities = 11/47 (23%), Positives = 27/47 (57%)
Query: 1325 LNKIRDINELSRQEVDEVIN--MCVREDYVSSSDN--IQKRRYVAMV 1367
+NK++++ +L E+ E+ M V + +S++ + +RR V ++
Sbjct: 1837 VNKLQNVEQLPPDEIKELCQSVMPVGVEKISTAQKYVLARRRLVKLI 1883
Score = 42 (19.8 bits), Expect = 7.4e-21, Sum P(3) = 7.4e-21
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 50 ELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGA 92
+L S + V + + G L+AFL++ ST+ + E A
Sbjct: 572 DLPSADSVQYRHLPSRGITQKEQDGLIAFLQLTSTIITWSENA 614
Score = 41 (19.5 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 31/154 (20%), Positives = 65/154 (42%)
Query: 377 PGVDSIITERNNQIYGPLLEKAVQLSLEIV---ILVFEKDLLLSDFWRPLYQPVDVILSQ 433
P + ++ T + + + K Q +LE++ ++V + D RP P + +
Sbjct: 1545 PLLKALYTYESKMAFLTRVAKIQQGALELLRSGVIVRLAQCQVYDM-RPEMDPQGMFGMR 1603
Query: 434 DHNQIV-ALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACL 492
D + A ++ R LP ++ C + + S + + Q+L + S ++ C
Sbjct: 1604 DPPVFIPAPVDRYRQILLPALRLCQVILTSSTAQHLQAAGQVLQFLISHSDTIQAILRCQ 1663
Query: 493 ELRSEESQ-------IIEKSGDDPGVLIMQLLID 519
++ + Q II K+ PG+L +L +D
Sbjct: 1664 DVSAGSLQELALLTGIISKAAL-PGIL-SELDVD 1695
>UNIPROTKB|Q92621 [details] [associations]
symbol:NUP205 "Nuclear pore complex protein Nup205"
species:9606 "Homo sapiens" [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IDA;NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000059 "protein
import into nucleus, docking" evidence=TAS] [GO:0006913
"nucleocytoplasmic transport" evidence=TAS] [GO:0034399 "nuclear
periphery" evidence=IDA] [GO:0051292 "nuclear pore complex
assembly" evidence=IMP] [GO:0017056 "structural constituent of
nuclear pore" evidence=IMP] [GO:0031965 "nuclear membrane"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0008645 "hexose transport" evidence=TAS] [GO:0010827
"regulation of glucose transport" evidence=TAS] [GO:0015758
"glucose transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR021827
Pfam:PF11894 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0016032 GO:GO:0044281 GO:GO:0005975 GO:GO:0031965
GO:GO:0005643 GO:GO:0019221 GO:GO:0015758 GO:GO:0010827
GO:GO:0055085 EMBL:CH471070 GO:GO:0051028 EMBL:AC093107
GO:GO:0000059 KO:K14310 EMBL:D86978 EMBL:BC044255 EMBL:BC136624
EMBL:BC146784 IPI:IPI00783781 RefSeq:NP_055950.1 UniGene:Hs.632299
IntAct:Q92621 MINT:MINT-2813123 STRING:Q92621 PhosphoSite:Q92621
DMDM:296439283 PaxDb:Q92621 PRIDE:Q92621 Ensembl:ENST00000285968
GeneID:23165 KEGG:hsa:23165 UCSC:uc003vsw.3 CTD:23165
GeneCards:GC07P135242 HGNC:HGNC:18658 HPA:HPA024574 MIM:614352
neXtProt:NX_Q92621 PharmGKB:PA38624 eggNOG:NOG317247
HOGENOM:HOG000044863 HOVERGEN:HBG052682 InParanoid:Q92621
OMA:AVCLFTP OrthoDB:EOG4XKV62 GenomeRNAi:23165 NextBio:44556
ArrayExpress:Q92621 Bgee:Q92621 CleanEx:HS_NUP205
Genevestigator:Q92621 GermOnline:ENSG00000155561 Uniprot:Q92621
Length = 2012
Score = 289 (106.8 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 191/819 (23%), Positives = 340/819 (41%)
Query: 456 CSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLE-------LRSEESQIIEKS--- 505
C I S + ++VG + + L+ + CL+ +R EE +EK
Sbjct: 921 CCISCNSNIQIKLVG--DFTHDQSISQKLMAGFVECLDCEDAEEFVRLEEGSELEKKLVA 978
Query: 506 -GDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQ-PKF---HYSCLKIILE 560
+ + I+ LLI ++ PN+ LL F+L P+ T LQ P +CL IL
Sbjct: 979 IRHETRIHILNLLITSLECNPPNLALYLLGFELKKPVSTTNLQDPGVLGCPRTCLHAILN 1038
Query: 561 ILEKVSKPDVNAL-------LHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDA 613
ILEK ++ + L E +Q++Y+LC T GPTM L + F L
Sbjct: 1039 ILEKGTEGRTGPVAVRESPQLAELCYQVIYQLCACSDTSGPTMRYLRTSQ-DFLFSQLQY 1097
Query: 614 IGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLF---- 669
+ P SN+ IS L+Q +WL+K +IEL +S Q + L HL
Sbjct: 1098 L---PF----SNKEYEISMLNQMSWLMKTASIELRV---TSLNRQRSHTQRLLHLLLDDM 1147
Query: 670 -------GRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKL 722
G IED +R++S F+ H T T + K+L +L+ + F + ++
Sbjct: 1148 PVKPYSDGEGGIEDENRSVS-GFL------HFDTATKVRRKILNILDSIDF-----SQEI 1195
Query: 723 SQIVSNMKYDLLA-EEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQL 781
+ + +D E+++ N + + RG + ++ L ++N + +
Sbjct: 1196 PEPLQLDFFDRAQIEQVIAN--------CEHKNLRGQTVCNVKLLHRVLVAEVNALQG-M 1246
Query: 782 SNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSR----RIS 837
+ G L E I +L++ NK L+ A+ H L W Q+VE+ ++ I
Sbjct: 1247 AAIGQRPLL---MEEISTVLQYVVGRNKLLQCLHAKRHALESWRQLVEIILTACPQDLIQ 1303
Query: 838 ALGNR---SEILYQILDACLGASASPDCSLRMA-FILCQVALTCMAKLRDEKFLCPGGLN 893
A + +IL + D L A+ + +A + A A L ++K G
Sbjct: 1304 AEDRQLIIRDILQDVHDKILDDEAAQELMPVVAGAVFTLTAHLSQAVLTEQKETSVLGPA 1363
Query: 894 SDSVTF-LD------------VIMVKQLSNGACHSLLFKLIMAILRNESS-EALRRRQYA 939
F LD ++ + + + + +L KL+ IL+ + +R Y
Sbjct: 1364 EAHYAFMLDSCFTSPPPEENPLVGFASIGDSSLYIILKKLLDFILKTGGGFQRVRTHLYG 1423
Query: 940 LLLSYFQYCQHMLAPDVPTTVXXXXXXXXXXXXXXXXXKIDKEQAELTHANFSTLRKEAQ 999
LL Y Q Q PD P T+ K Q E N + +
Sbjct: 1424 SLLYYLQIAQR---PDEPDTLEAAKKTMWERLTAPEDV-FSKLQRE----NIAIIESYGA 1475
Query: 1000 AILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQ 1059
A++++ +DA G E G+ L+L +LD ++ +D ++ +L L + G+L+ L++ S V
Sbjct: 1476 ALMEVVCRDACDGHEIGRMLALALLDRIVSVDKQQQWLLYLSNSGYLK-VLVD-SLVEDD 1533
Query: 1060 DGKRSLDT-----LQRACTXXXXXXXXXRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQ 1114
+SL T L+ T R++ K + GA L G + +A C+ ++
Sbjct: 1534 RTLQSLLTPQPPLLKALYTYESKMAFLTRVA-KI-QQGALELLRSGVIVRLAQCQVYDMR 1591
Query: 1115 GSLRRVAT----KPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVM 1170
+ P + +DR R I+ P L+L ++ TS + + +V+
Sbjct: 1592 PETDPQSMFGMRDPPMFIPTPVDRYRQILLPALQLC----QVILTSSMAQ-HLQAAGQVL 1646
Query: 1171 DFIKGHQLLVDQVLQ-ENISEADELTMEQINLVVGILSK 1208
F+ H + +L+ +++S +++++ L+ GI+SK
Sbjct: 1647 QFLISHSDTIQAILRCQDVSAG---SLQELALLTGIISK 1682
Score = 247 (92.0 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 118/482 (24%), Positives = 205/482 (42%)
Query: 76 VAFLKMLSTLASSQEGASKVYELL-----------QGKAFRSIGWRTLFDCLSIYDEKFK 124
+ +LKML LA+ + A + LL QG + W F L +Y E +
Sbjct: 511 IPYLKMLQGLANGPQCAHYCFSLLKVNGSSHVENIQGAGGSPVSWEHFFHSLMLYHEHLR 570
Query: 125 QSLQTGGAL----LPD--FQEGDAKALVAYLNVLQKVM---ENGNSI--ERKNWFPDIEP 173
+ L + ++ LP + + L+A+L + ++ EN E W P +
Sbjct: 571 KDLPSADSVQYRHLPSRGITQKEQDGLIAFLQLTSTIITWSENARLALCEHPQWTP-VVV 629
Query: 174 LFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQ-P 232
+ LL ++PP LK L +AA S + ++W+ LE Y T + T + P
Sbjct: 630 ILGLLQC-SIPPVLKAELLKTLAA-FGKSPEIAASLWQSLE-Y-------TQILQTVRIP 679
Query: 233 IAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDXXXXXXXXXXXXY--- 289
Q ++ ELNEIE+R E+YP T +F L++ L+ E S+ Y
Sbjct: 680 SQRQAIGIEVELNEIESRCEEYPLTRAFCQLISTLV-ESSFPSNLGAGLRPPGFDPYLQF 738
Query: 290 --DHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSP 347
D VF F RAY EKW++ L+ F+ +L Y+ Q ED V+Q L
Sbjct: 739 LRDSVFLRFRTRAYRRAAEKWEVAEVVLEVFYKLLRDYEPQLEDF---VDQFVELQGEEI 795
Query: 348 IQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPL-----LEKAVQLS 402
I + P L+ ++ + + +L+ GV + T Y P LEKAVQ
Sbjct: 796 IAYKPPGFSLMYHLLNESPMLELALSLLEEGVKQLDT------YAPFPGKKHLEKAVQHC 849
Query: 403 LEIVILVFEKDLLLSDFWRP-----LYQPVDVIL------SQDHNQIVALLEYVRY-DFL 450
L ++ L +K+ L D R + P++ +L ++ + +V + Y+ + +
Sbjct: 850 LALLNLTLQKENLFMDLLRESQLALIVCPLEQLLQGINPRTKKADNVVNIARYLYHGNTN 909
Query: 451 PQIQQCSIKIMSILSSRMVGLVQLLLKY----NAASSLVEDYAACLELRSEESQIIEKSG 506
P++ S KI+ +S ++L+ + + + L+ + CL+ E + + G
Sbjct: 910 PELAFESAKILCCISCNSNIQIKLVGDFTHDQSISQKLMAGFVECLDCEDAEEFVRLEEG 969
Query: 507 DD 508
+
Sbjct: 970 SE 971
Score = 42 (19.8 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 50 ELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGA 92
+L S + V + + G L+AFL++ ST+ + E A
Sbjct: 572 DLPSADSVQYRHLPSRGITQKEQDGLIAFLQLTSTIITWSENA 614
>UNIPROTKB|F1PZ99 [details] [associations]
symbol:NUP205 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR021827 Pfam:PF11894 GeneTree:ENSGT00390000004003
EMBL:AAEX03010241 EMBL:AAEX03010242 Ensembl:ENSCAFT00000005205
Uniprot:F1PZ99
Length = 1985
Score = 300 (110.7 bits), Expect = 5.4e-40, Sum P(3) = 5.4e-40
Identities = 182/784 (23%), Positives = 323/784 (41%)
Query: 456 CSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLE-------LRSEESQIIEK--SG 506
C I S + ++VG + + L+ + CL+ +R EE +EK +G
Sbjct: 921 CCISCNSNIQIKLVG--DFTHDQSVSQKLMAGFVECLDSEDTEEFVRLEEGSELEKKLAG 978
Query: 507 --DDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQ-PKF---HYSCLKIILE 560
+ + I+ LLI ++ R PN+ LL F+L P+ T LQ P +CL IL
Sbjct: 979 IRHETRIHILNLLITSLERNPPNLALYLLGFELKKPVSTTNLQDPGVLGCPRTCLHAILN 1038
Query: 561 ILEKVSKPDVNAL-------LHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDA 613
ILEK ++ + L E +Q++Y+LC T GPTM L + F L
Sbjct: 1039 ILEKGTEGRTGPVAVRESPQLAELCYQVIYQLCACADTSGPTMRYLRTSQ-DFLFSQLQH 1097
Query: 614 IGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLF---- 669
+ P SN+ +S L+Q +WL+K +IEL +S Q + L HL
Sbjct: 1098 L---PF----SNKEYEMSMLNQMSWLMKTASIELRV---TSLNRQRSHTQRLLHLLLDDM 1147
Query: 670 -----------GRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDT 718
G IED +R++S F+ H T T + K+L +L+ + F S +
Sbjct: 1148 PVKPYSDALTDGEGGIEDENRSVS-GFL------HFDTTTKVRRKILSILDSIDF-SQEI 1199
Query: 719 AMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVY 778
L Q+ + + E+++ N + + RG + ++ L ++N +
Sbjct: 1200 PEPL-QLDFFDRTQI--EQVIAN--------CEHKNLRGQTVCNVKLLHRVLVAEVNALQ 1248
Query: 779 PQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVS---RR 835
++ G L E I +L++ NK L+ A+ H+L W Q+VE+ ++ +
Sbjct: 1249 G-MAAIGQRPLL---MEEISTILQYVVGRNKLLQCLHAKRHVLESWRQLVEIILTACPQD 1304
Query: 836 ISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSD 895
+ +R I+ IL + + + ++ T A L NS
Sbjct: 1305 LIQAEDRQLIIRDILQDVHDKILDDEAAQELMPVVAGAVFTLTAHLSQA---VRTEQNSP 1361
Query: 896 SVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESS-EALRRRQYALLLSYFQYCQHMLAP 954
++ + + + H +L KL+ IL+ + +R Y LL Y Q Q P
Sbjct: 1362 PPAENPMVGFASIGDSSLHIILKKLLDFILKTGGGFQRVRTHLYGSLLYYLQIAQR---P 1418
Query: 955 DVPTTVXXXXXXXXXXXXXXXXXKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSE 1014
D P T+ K Q E N + + A++++ +DA G E
Sbjct: 1419 DEPDTLEAAKKTMWERLTAPEDV-FSKLQRE----NIAIIESYGAALMEVVCRDACDGHE 1473
Query: 1015 PGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNV--SNVSYQDGKRSLDTLQRAC 1072
G+ L+L +LD ++ +D ++ +L L + G+L+ + ++ + + Q L +A
Sbjct: 1474 IGRMLALALLDRIVSVDKQQQWLLYLSNSGYLKVLVDSLVEDDHTLQSLLTPQPPLLKAL 1533
Query: 1073 -TXXXXXXXXXRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVAT----KPRRA 1127
T R++ K + GA L G + +A C+ ++ + P
Sbjct: 1534 YTYESKMAFLTRVA-KI-QQGALELLRSGVIVRLAQCQVYDMRPEMDPQGMFGMRDPPVF 1591
Query: 1128 LGGDIDRQRMIVTPMLRLV-FSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQ- 1185
+ +DR R I+ P LRL LTS T+ + +V+ F+ H + +L+
Sbjct: 1592 IPAPVDRYRQILLPALRLCQVILTS--STAQHLQAAG----QVLQFLISHSDTIQAILRC 1645
Query: 1186 ENIS 1189
+++S
Sbjct: 1646 QDVS 1649
Score = 242 (90.2 bits), Expect = 5.4e-40, Sum P(3) = 5.4e-40
Identities = 103/379 (27%), Positives = 162/379 (42%)
Query: 76 VAFLKMLSTLASSQEGASKVYELL-----------QGKAFRSIGWRTLFDCLSIYDEKFK 124
+ +LKML LA+ + A + LL QG + W F L +Y E +
Sbjct: 511 IPYLKMLQGLANGPQCAHYCFSLLKVNGSSHVENIQGTGGSPVSWEHFFHSLMLYHEHLR 570
Query: 125 QSLQTGGAL----LPD--FQEGDAKALVAYLNVLQKVM---ENGNSI--ERKNWFPDIEP 173
+ L + ++ LP + + L+A+L + ++ EN E W P +
Sbjct: 571 KDLPSADSVQYRHLPSRGITQKEQDGLIAFLQLTSTIITWSENARLALCEHPQWTP-VVV 629
Query: 174 LFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQ-P 232
+ LL ++PP LK L +AA S + ++W+ LE Y T + T + P
Sbjct: 630 ILGLLQC-SIPPVLKAELLKTLAA-FGKSPEIAASLWQSLE-Y-------TQILQTVRVP 679
Query: 233 IAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDXXXXXXXXXXXXY--- 289
Q ++ ELNEIE+R E+YP T +F L++ L+ E S+ Y
Sbjct: 680 SQRQAIGIEVELNEIESRCEEYPLTRAFCQLISTLV-ESSFPSNLGAGLRPPGFDPYLQF 738
Query: 290 --DHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSP 347
D VF F RAY EKW++ L+ F+ +L Y+ Q ED V+Q L
Sbjct: 739 LRDSVFLRFRTRAYRRAAEKWEVAEVVLEVFYKLLRDYEPQLEDF---VDQFVELQGEEI 795
Query: 348 IQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPL-----LEKAVQLS 402
I + P L+ ++ + + +L+ GV + T Y P LEKAVQ
Sbjct: 796 IAYKPPGFSLMYHLLNESPMLELALSLLEEGVKQLDT------YAPFPGKKHLEKAVQHC 849
Query: 403 LEIVILVFEKDLLLSDFWR 421
L ++ L +K+ L D R
Sbjct: 850 LALLNLTLQKENLFMDLLR 868
Score = 190 (71.9 bits), Expect = 2.0e-28, Sum P(3) = 2.0e-28
Identities = 97/429 (22%), Positives = 180/429 (41%)
Query: 795 EAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVS---RRISALGNRSEILYQILD 851
E I +L++ NK L+ A+ H+L W Q+VE+ ++ + + +R I+ IL
Sbjct: 1261 EEISTILQYVVGRNKLLQCLHAKRHVLESWRQLVEIILTACPQDLIQAEDRQLIIRDILQ 1320
Query: 852 ACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNG 911
+ + + ++ T A L NS ++ + +
Sbjct: 1321 DVHDKILDDEAAQELMPVVAGAVFTLTAHLSQA---VRTEQNSPPPAENPMVGFASIGDS 1377
Query: 912 ACHSLLFKLIMAILRNESS-EALRRRQYALLLSYFQYCQHMLAPDVPTTVXXXXXXXXXX 970
+ H +L KL+ IL+ + +R Y LL Y Q Q PD P T+
Sbjct: 1378 SLHIILKKLLDFILKTGGGFQRVRTHLYGSLLYYLQIAQR---PDEPDTLEAAKKTMWER 1434
Query: 971 XXXXXXXKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICI 1030
K Q E N + + A++++ +DA G E G+ L+L +LD ++ +
Sbjct: 1435 LTAPEDV-FSKLQRE----NIAIIESYGAALMEVVCRDACDGHEIGRMLALALLDRIVSV 1489
Query: 1031 DHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDT-----LQRACTXXXXXXXXXRIS 1085
D ++ +L L + G+L+ L++ S V +SL T L+ T R++
Sbjct: 1490 DKQQQWLLYLSNSGYLK-VLVD-SLVEDDHTLQSLLTPQPPLLKALYTYESKMAFLTRVA 1547
Query: 1086 HKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVAT----KPRRALGGDIDRQRMIVTP 1141
K + GA L G + +A C+ ++ + P + +DR R I+ P
Sbjct: 1548 -KI-QQGALELLRSGVIVRLAQCQVYDMRPEMDPQGMFGMRDPPVFIPAPVDRYRQILLP 1605
Query: 1142 MLRLV-FSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQ-ENISEADELTMEQI 1199
LRL LTS T+ + +V+ F+ H + +L+ +++S +++++
Sbjct: 1606 ALRLCQVILTS--STAQHLQAAG----QVLQFLISHSDTIQAILRCQDVSAG---SLQEL 1656
Query: 1200 NLVVGILSK 1208
L+ GI+SK
Sbjct: 1657 ALLTGIISK 1665
Score = 43 (20.2 bits), Expect = 5.4e-40, Sum P(3) = 5.4e-40
Identities = 11/47 (23%), Positives = 27/47 (57%)
Query: 1325 LNKIRDINELSRQEVDEVIN--MCVREDYVSSSDN--IQKRRYVAMV 1367
+NK++++ +L E+ E+ M V + +S++ + +RR V ++
Sbjct: 1815 VNKLQNVEQLPPDEIKELCQSVMPVGVEKISTAQKYVLARRRLVKLI 1861
Score = 42 (19.8 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 50 ELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGA 92
+L S + V + + G L+AFL++ ST+ + E A
Sbjct: 572 DLPSADSVQYRHLPSRGITQKEQDGLIAFLQLTSTIITWSENA 614
Score = 40 (19.1 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 23/128 (17%), Positives = 53/128 (41%)
Query: 377 PGVDSIITERNNQIYGPLLEKAVQLSLEIV---ILVFEKDLLLSDFWRPLYQPVDVILSQ 433
P + ++ T + + + K Q +LE++ ++V + D RP P + +
Sbjct: 1528 PLLKALYTYESKMAFLTRVAKIQQGALELLRSGVIVRLAQCQVYDM-RPEMDPQGMFGMR 1586
Query: 434 DHNQIV-ALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACL 492
D + A ++ R LP ++ C + + S + + Q+L + S ++ C
Sbjct: 1587 DPPVFIPAPVDRYRQILLPALRLCQVILTSSTAQHLQAAGQVLQFLISHSDTIQAILRCQ 1646
Query: 493 ELRSEESQ 500
++ + Q
Sbjct: 1647 DVSAGSLQ 1654
Score = 39 (18.8 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 79 LKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCL 116
++ +ST+ G +K+ + L K WR L + +
Sbjct: 1260 MEEISTILQYVVGRNKLLQCLHAKRHVLESWRQLVEII 1297
>UNIPROTKB|E1BV83 [details] [associations]
symbol:NUP205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR021827 Pfam:PF11894 GeneTree:ENSGT00390000004003
OMA:AVCLFTP EMBL:AADN02005990 EMBL:AADN02005991 IPI:IPI00594475
Ensembl:ENSGALT00000019063 Uniprot:E1BV83
Length = 2017
Score = 268 (99.4 bits), Expect = 3.1e-36, Sum P(3) = 3.1e-36
Identities = 171/786 (21%), Positives = 323/786 (41%)
Query: 468 MVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPN 527
M G V+ L +A + D EL E+ + + + + I+ LLI ++ P+
Sbjct: 948 MAGFVECLDNEDAEELINPDE----ELEPEKKRA--RIHHETRIHILNLLITSLECSPPS 1001
Query: 528 ITHLLLKFDLDTPIERTVLQ-PKF---HYSCLKIILEILEKVSK----PDV---NALLHE 576
+ LL ++L P+ T LQ P +CL IL ILEK ++ P + L E
Sbjct: 1002 LALYLLGYELKKPVSTTNLQDPGVLGCPRTCLHAILNILEKGTETRNGPTAVQESPHLAE 1061
Query: 577 FGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQR 636
+Q++Y+LC T GPTM L + F L + P R IS+L+Q
Sbjct: 1062 LCYQVIYQLCACSETSGPTMRYLRTSQ-DFLFTQLQYL---PFSIREHE----ISTLNQM 1113
Query: 637 AWLLKLLAIELHA-GYGSSSTH-QEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHA 694
+WL+K AIE+ +H Q +L + + ++ D + + + H
Sbjct: 1114 SWLMKTAAIEMRVTSLNRQRSHTQRLLHLLLDDMPVKPYLADGEGGMEDESRSVSGFLHF 1173
Query: 695 GTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYS 754
T + + K+L +L+ + F S D L Q+ + + E+++ N + +
Sbjct: 1174 DTASKVRRKILSILDSIDF-SQDIPEPL-QLDFFDRVQI--EQVIAN--------CEHKN 1221
Query: 755 ERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQ 814
RG + ++ L ++N + ++ G L E I +L++ + NK L+
Sbjct: 1222 ARGQVVCNVKHLHRVLVAEVNALQG-MAAIGQRPLL---MEEINTILQYVVERNKLLQCL 1277
Query: 815 AAQLHMLTGWSQVVEVSVS---RRISALGNRSEILYQILDACLGASASPDCSLRMAFILC 871
A+ H L W Q+VE+ ++ + + +R I+ +L D + + ++
Sbjct: 1278 HAKKHALESWRQLVEIILTACPQDLIQAEDRQLIIRDLLQDVHDKILDDDAAQELMPVVA 1337
Query: 872 QVALTCMAKLR-----DEK--FLCPGGLNSDSVTFLD-----------VIM-VKQLSNGA 912
T A L ++K P S V LD + M + + +
Sbjct: 1338 GAVFTLTAHLSQSVKTEQKQPLAVPMTGQSQYVLMLDGSFTSSPGSESISMGFASIGDSS 1397
Query: 913 CHSLLFKLIMAILRNESS--EALRRRQYALLLSYFQYCQHMLAPDVPTTVXXXXXXXXXX 970
H +L KL+ IL+ + +R Y LL Y Q Q PD P T+
Sbjct: 1398 LHIILKKLLDFILKTAGGGFQRVRTHLYGSLLYYLQIAQR---PDEPDTLEAAKKTMWER 1454
Query: 971 XXXXXXXKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICI 1030
K Q E N + + A++++ +DA G E G+ L+L +LD ++ +
Sbjct: 1455 LTAPEDV-FSKLQRE----NMAIIESYGAALMEVVCRDACDGHEIGRMLALALLDRIVSV 1509
Query: 1031 DHEKYFLNQLQSRGFLRSCLMNV--SNVSYQDGKRSLDTLQRAC-TXXXXXXXXXRISHK 1087
D ++ +L L + G+L+ + ++ +++ Q L +A T R++
Sbjct: 1510 DKQQQWLLYLSNSGYLKVLVDSLVDDDLTLQSLLMPQPPLLKALYTYESKMAFLTRVAKS 1569
Query: 1088 YGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVAT----KPRRALGGDIDRQRMIVTPML 1143
+ GA L G + +A C+ ++ P + ++R R I+ P L
Sbjct: 1570 --QQGALELLRSGVIVRLAQCQVYDMRPETDHQGMYGMRDPPVFIPAPVERYRQILLPAL 1627
Query: 1144 RLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQ-ENISEADELTMEQINLV 1202
+L ++ TS + + +V+ F+ H + +L+ +++S +++++ +
Sbjct: 1628 QLC----QVILTSSMAQ-HLQAAGQVLQFLISHSDTIQAILRCQDVSVG---SLQELASL 1679
Query: 1203 VGILSK 1208
GI+SK
Sbjct: 1680 TGIISK 1685
Score = 239 (89.2 bits), Expect = 3.1e-36, Sum P(3) = 3.1e-36
Identities = 126/520 (24%), Positives = 217/520 (41%)
Query: 31 PLPFVSLL-EFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQ 89
PL +++ ++ +Q+ P+ VL FV G D + +LKML LAS
Sbjct: 469 PLQTSTIMGSYLGVAHQRPPQR---QVVLSKFVRQMG-DLLPSTIYIPYLKMLRGLASGP 524
Query: 90 EGASKVYELL-----------QGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGAL----L 134
+ A + LL QG + W F L +Y E ++ L + ++ L
Sbjct: 525 QCAHYCFSLLKVNGSSHAENIQGAGGSPVSWEHFFHSLMLYHEHLRKDLPSADSVQYRHL 584
Query: 135 P--DFQEGDAKALVAYLNVLQKVM---ENGNSI--ERKNWFPDIEPLFKLLSYENVPPYL 187
P + + L+A+L + ++ EN E W P + + LL ++PP L
Sbjct: 585 PLRGITQKEQDGLIAFLQLTTVIVNWSENARLALCEHPQWTP-VVVILGLLQC-SIPPVL 642
Query: 188 KGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEI 247
K L + A S + ++W+ LE + V T P Q ++ ELNEI
Sbjct: 643 KAELLETLTA-FGKSPEIAASLWQSLEYTQILQTVRT-------PGQRQAIGIEVELNEI 694
Query: 248 EARREQYPSTISFLNLLNALIAEEKDVSDXXXXXXXXXXXXY-----DHVFGPFPQRAYA 302
E+R E+YP T +F L++ L+ E S+ Y D VF F RAY
Sbjct: 695 ESRCEEYPLTRAFCRLISTLV-ESSFPSNLGAGLRPPGFDPYLQFLRDSVFLRFRTRAYR 753
Query: 303 DPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFM 362
EKW++ L+ F+ +L Y+ Q ED V+Q L I + P L+ +
Sbjct: 754 RAAEKWEVAEVVLEVFYKLLRDYEPQLEDF---VDQYVELQGDEIIAYKPPGFNLMYHLL 810
Query: 363 SGKAVFRNIMGILQPGVDSIITERNNQIYGPL-----LEKAVQLSLEIVILVFEKDLLLS 417
+ + + +L+ GV + T Y P LEKAV+ L ++ L +K+ L
Sbjct: 811 NESPMLELSLSLLEEGVKQLDT------YAPFPGKKHLEKAVEHCLALLNLTLQKENLFM 864
Query: 418 DFWRP-----LYQPVDVIL------SQDHNQIVALLEYVRY-DFLPQIQQCSIKIMSILS 465
D R + P++ +L ++ + +V + Y+ + + P++ S KI+ +S
Sbjct: 865 DLLRESHLSLIVTPLEQLLQGINPRTKKADHVVNIARYLYHGNSNPELAFESAKILCCIS 924
Query: 466 SRMVGLVQLLLKY----NAASSLVEDYAACLELRSEESQI 501
++L+ + + + L+ + CL+ E I
Sbjct: 925 CNSNIQIKLVGDFTHDQSTSQKLMAGFVECLDNEDAEELI 964
Score = 43 (20.2 bits), Expect = 3.1e-36, Sum P(3) = 3.1e-36
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 1325 LNKIRDINELSRQEVDEVIN--MCVREDYVSSSDN--IQKRRYVAMV 1367
+NK++++ +L E+ E+ M D +S++ + +RR V ++
Sbjct: 1841 VNKLQNVEQLPPDEIKELCQSVMPAGVDKISTAQKYVLARRRLVKLI 1887
>ZFIN|ZDB-GENE-040715-8 [details] [associations]
symbol:nup205 "nucleoporin 205" species:7955 "Danio
rerio" [GO:0005643 "nuclear pore" evidence=IEA] InterPro:IPR021827
Pfam:PF11894 ZFIN:ZDB-GENE-040715-8 GeneTree:ENSGT00390000004003
HOGENOM:HOG000044863 HOVERGEN:HBG052682 OrthoDB:EOG4XKV62
EMBL:CR450784 EMBL:BX005474 IPI:IPI00512693 UniGene:Dr.31864
Ensembl:ENSDART00000125555 InParanoid:Q1L8Z1 Uniprot:Q1L8Z1
Length = 2001
Score = 195 (73.7 bits), Expect = 5.0e-32, Sum P(5) = 5.0e-32
Identities = 109/432 (25%), Positives = 180/432 (41%)
Query: 107 IGWRTLFDCLSIYDEKFKQSLQTGGAL----LP--DFQEGDAKALVAYLNVLQKVM---E 157
+ W F L +Y E ++ + + + LP + + + L A+L +L ++ E
Sbjct: 559 VSWEHFFHSLMLYHENLRRDVPSADSTQYRHLPIRGITQRELEGLTAFLQLLTTIITWSE 618
Query: 158 NGNSI--ERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQ 215
N E W P + + LL +V P LK + + +AA S + ++W+ LE
Sbjct: 619 NARLALCEHPQWTP-VVVMLGLLQC-SVQPVLKAQVLHVLAA-FGKSPEIAASLWQSLE- 674
Query: 216 YDLPVVVGTHVGNTAQ-PIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDV 274
Y T + T + P Q ++ ELNEIE+ E+YP T +F +L++ L+ V
Sbjct: 675 Y-------TQILQTVKIPGQRQAAGIEVELNEIESSCEEYPLTRAFCHLISTLVESALPV 727
Query: 275 SDXXXXXXXXXXXXY-----DHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQE 329
+ Y D VF FP RAY EKW++ A L+ FH +L Y+ Q
Sbjct: 728 N-LGAGLRAPGFQPYLDFLRDSVFLAFPTRAYRRSAEKWEVAEAVLEVFHKLLREYEPQP 786
Query: 330 ED-IDNAVE-QSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERN 387
D + VE Q + P L + LL D + +L+ G + T
Sbjct: 787 SDFLPEMVELQGEQVPAHKPPGHSL-MFHLLND----SPTLSLCLNLLEEGARQLDTYA- 840
Query: 388 NQIYGPL-LEKAVQLSLEIVILVFEKDLLLSDFWRP-----LYQPVDVIL------SQDH 435
Q G LE AV L ++ L +K++ D R L P++ +L S+
Sbjct: 841 -QFPGKKQLESAVLHCLCLLELALQKEVTFMDLLRESQTSLLVSPLEQLLQGVSAQSRKA 899
Query: 436 NQIVALLEYVRYDFL-PQIQQCSIKIMSILS------SRMVGLVQLLLKYNAASSLVEDY 488
+ I + Y+ + P S KI+ ++ +R+VG + L+ +
Sbjct: 900 DHITNIARYLYHSSSNPDAAFQSAKILRRITRYPNIQARLVG--DFTHDQAVSERLMAGF 957
Query: 489 AACLELRSEESQ 500
CL+ SEE+Q
Sbjct: 958 VECLD--SEEAQ 967
Score = 166 (63.5 bits), Expect = 5.0e-32, Sum P(5) = 5.0e-32
Identities = 95/431 (22%), Positives = 175/431 (40%)
Query: 790 LNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISAL---GNRSEIL 846
+ +V +QQ++ + N+ +A+ H L W +VE ++ S L R I+
Sbjct: 1261 MEEVNSVLQQVV----ERNRVRRSLSAKRHALQSWRSLVETILTACPSELIPADQRQLII 1316
Query: 847 YQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVK 906
+L S D + + I+ T A L G+ + + +
Sbjct: 1317 RDLLLDLHDKVLSEDAAGELMPIVAGAVFTLTAHLSQSVLSEQQGVGPEGGSGSGFASI- 1375
Query: 907 QLSNGACHSLLFKLIMAILRNESS-EALRRRQYALLLSYFQYCQHMLAPDVPTTVXXXXX 965
+N A H +L KL+ IL + LR Y LL Y Q Q P+ P T+
Sbjct: 1376 --ANSALHLILRKLLDFILCTGGGFQRLRAHLYGALLYYLQIAQK---PEEPETLQTGTS 1430
Query: 966 XXXXXXXXXXXXKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLD 1025
K Q E N S + A++++ +DA G E G+ L+L VLD
Sbjct: 1431 MWERLTAPEDC--FSKLQRE----NLSIIESYGTALMEVVCRDACDGHEIGRMLALAVLD 1484
Query: 1026 ALICIDHEKYFLNQLQSRGFLRSCLMNVS--NVSYQDGKRSLDTLQRAC-TXXXXXXXXX 1082
++ ID + +L L + G+LR + ++ +VS Q L +
Sbjct: 1485 RVLSIDRQCQWLVYLCNSGYLRVLVESLKQDDVSLQTLLTPQPPLLKPLYIYESKMALLT 1544
Query: 1083 RISHKYGKSGAQVLFSMGSLEHIASCKAVGL--QGSLRRVATK--PRRALGGDIDRQRMI 1138
R++ GA L G + + C+ + Q RV + P + ++R R I
Sbjct: 1545 RVAKT--AQGAMELLRCGLVAQLVECQVFHMLPQNDALRVFGQRDPSGFIPSPLERYRQI 1602
Query: 1139 VTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQ-ENISEADELTME 1197
+ P LRL+ ++ TS + + +V+ ++ H ++ +L +++S +++
Sbjct: 1603 LLPTLRLM----QVILTSTTAQHQQGAA-QVLQWLIVHSDVIQSILHGQDMSMG---SLQ 1654
Query: 1198 QINLVVGILSK 1208
+++L+ I+SK
Sbjct: 1655 ELSLLTAIISK 1665
Score = 159 (61.0 bits), Expect = 5.0e-32, Sum P(5) = 5.0e-32
Identities = 63/232 (27%), Positives = 108/232 (46%)
Query: 496 SEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQ-PKF---H 551
S+ + + + + + I+ LLI ++ PN+ LL +++ P+ T LQ P
Sbjct: 975 SDSEKRVARIRHETKIHILNLLITSLELTGPNLGLYLLGYEVKKPVSSTNLQDPGVLGCP 1034
Query: 552 YSCLKIILEILEKVSK----PDV--NA-LLHEFGFQLLYELCLDPLTCGPTMDLLSNKKY 604
SCL IL +L++ S P + A L E +Q++Y+LC P T GPTM L +
Sbjct: 1035 RSCLHAILSLLQRGSDSRSGPGLIKQAPQLAELCYQVIYQLCACPDTSGPTMRYLRTSQ- 1093
Query: 605 QFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHA-GYGSSSTHQEACQT 663
F HL + P + N+ I++L Q +WL+K AIEL +H +
Sbjct: 1094 DFLFSHLQHL---PFVL-SENE---IAALSQMSWLMKTTAIELRVTSLNRQRSHTQRLLN 1146
Query: 664 ILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISK--SKVLELLEVVQF 713
+L L + H TD + ++++ T+SK ++L +L+ + F
Sbjct: 1147 LL--LDDQPHTLHTDGETGMEEENRSVSGFLQFGTVSKVRRRLLSVLDAIDF 1196
Score = 52 (23.4 bits), Expect = 5.0e-32, Sum P(5) = 5.0e-32
Identities = 33/162 (20%), Positives = 64/162 (39%)
Query: 1224 LFGMMSSLFSSDLENLTFSQSARSLENQRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVS 1283
L G + + +E+ T S S + E + + E+ Q+C ++ Y ++ + S Q S
Sbjct: 1704 LVGTDRARYLKQIED-TVSPSNLA-EKREEMEVAMQQICANIMEYCQTLLLQSSSEAQFS 1761
Query: 1284 RSLDDYNXXXXXXXXXXXXXXXXXXXXXXVLERAAEEKSLLLNKIRD-INELSRQEV--- 1339
L + +L+ +A + + R +N+L R E
Sbjct: 1762 LCLFSPSASEPADVSIPSARVPSLGLVLLLLKNSASDFFRYHDSHRQSLNKLERVEQLPP 1821
Query: 1340 DEVINMCVREDYVSSSDNIQK-----RRYVAMVEMCQVAGNR 1376
+E+ +C + VS S ++K R +A + Q+ NR
Sbjct: 1822 EELKELC--QGLVSGSGGVEKISSVQRNVLAKRRLVQLVNNR 1861
Score = 43 (20.2 bits), Expect = 1.9e-17, Sum P(4) = 1.9e-17
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 34 FVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGA 92
F SL+ + + + P S + + + G + L AFL++L+T+ + E A
Sbjct: 565 FHSLMLYHENLRRDVP---SADSTQYRHLPIRGITQRELEGLTAFLQLLTTIITWSENA 620
Score = 42 (19.8 bits), Expect = 7.8e-08, Sum P(3) = 7.8e-08
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 461 MSILSSRM--VGLVQLLLKYNAAS 482
+SI S+R+ +GLV LLLK N+AS
Sbjct: 1775 VSIPSARVPSLGLVLLLLK-NSAS 1797
Score = 38 (18.4 bits), Expect = 5.0e-32, Sum P(5) = 5.0e-32
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 76 VAFLKMLSTLASSQEGASKVYELLQ------------GKAFRSIGWRTLFDCLSIYDEKF 123
+ +L+ML LA+ + + + LL+ G + + W F L +Y E
Sbjct: 516 IPYLRMLKGLANGPQCSHYCFSLLKTNGAPHGGNRQAGVSGSLVSWEHFFHSLMLYHENL 575
Query: 124 KQSL 127
++ +
Sbjct: 576 RRDV 579
>UNIPROTKB|I3LC31 [details] [associations]
symbol:NUP205 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005643 "nuclear pore" evidence=IEA] InterPro:IPR021827
Pfam:PF11894 GeneTree:ENSGT00390000004003 EMBL:CU694894
Ensembl:ENSSSCT00000031986 OMA:DEVELAM Uniprot:I3LC31
Length = 727
Score = 203 (76.5 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 141/631 (22%), Positives = 263/631 (41%)
Query: 624 SNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLF------------GR 671
SN+ IS L+Q +WL+K +IEL +S Q + L HL G
Sbjct: 21 SNKEYEISMLNQMSWLMKTASIELRV---TSLNRQRSHTQRLLHLLLDDMPVKPYSADGE 77
Query: 672 DHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKY 731
+ED +R++S F+ H T T + K+L +L+ + F + ++ + + +
Sbjct: 78 GGLEDENRSVS-GFL------HFDTATKVRRKILSILDSIDF-----SQEIPEPLQLDFF 125
Query: 732 DLLA-EEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAEL 790
D E+++ N + + RG + ++ L ++N + ++ G L
Sbjct: 126 DRAQIEQVIAN--------CEHKNLRGQTVCNVKLLHRVLVAEVNALQG-MAAIGQRPLL 176
Query: 791 NDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVS---RRISALGNRSEILY 847
E I +L++ NK L+ A+ H L W Q+VE+ ++ + + +R I+
Sbjct: 177 ---MEEISTILQYVVGRNKLLQCLHAKRHALESWRQLVEIILTACPQDLIQAEDRQLIIR 233
Query: 848 QILDACLGASASPDCSLRMAFILCQVALTCMAKL----RDEK----FLCPGGLNS----D 895
IL + + + ++ T A L R E+ L PG + D
Sbjct: 234 DILQDVHDKILDDEAAQELMPVVAGAVFTLTAHLSQAVRTEQKQPLVLGPGEAHYAFMLD 293
Query: 896 SVTFLD-------VIMVKQLSNGACHSLLFKLIMAILRNESS-EALRRRQYALLLSYFQY 947
S +F V+ + + + H +L KL+ IL+ + +R Y LL Y Q
Sbjct: 294 S-SFTSPPPAENPVVGFASIGDSSLHIILKKLLDFILKTGGGFQRVRTHLYGSLLYYLQI 352
Query: 948 CQHMLAPDVPTTVXXXXXXXXXXXXXXXXXKIDKEQAELTHANFSTLRKEAQAILDLFIK 1007
Q PD P T+ K Q E N + + A++++ +
Sbjct: 353 AQR---PDEPDTLEAAKKTMWERLTAPEDV-FSKLQRE----NIAIIESYGAALMEVVCR 404
Query: 1008 DATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDT 1067
DA G E G+ L+L +LD ++ +D ++ +L L + G+L+ L++ S V +SL T
Sbjct: 405 DACDGHEIGRMLALALLDRIVSVDKQQQWLLYLSNSGYLK-VLVD-SLVEDDRTLQSLLT 462
Query: 1068 -----LQRACTXXXXXXXXXRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVAT 1122
L+ T R++ K + GA L G + +A C+ ++ +
Sbjct: 463 PQPPLLKALYTYESKMAFLTRVA-KI-QQGALELLRSGVIVRLAQCQVYDMRPEMDPQGM 520
Query: 1123 ----KPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQL 1178
P + +DR R I+ P LRL ++ TS + + +V+ F+ H
Sbjct: 521 FGMRDPPVFIPTPVDRYRQILLPALRLC----QVILTSSMAQ-HLQAAGQVLQFLISHSD 575
Query: 1179 LVDQVLQ-ENISEADELTMEQINLVVGILSK 1208
+ +L+ +++S +++++ L+ GI+SK
Sbjct: 576 TIQAILRCQDVSAG---SLQELALLTGIISK 603
>FB|FBgn0031078 [details] [associations]
symbol:Nup205 "Nucleoporin 205kD" species:7227 "Drosophila
melanogaster" [GO:0017056 "structural constituent of nuclear pore"
evidence=ISS] [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0044611 "nuclear pore inner ring" evidence=ISS] [GO:0007184
"SMAD protein import into nucleus" evidence=IMP] [GO:0051297
"centrosome organization" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR021827 Pfam:PF11894 GO:GO:0005737 GO:GO:0022008
GO:GO:0051297 EMBL:AE014298 GO:GO:0007184 KO:K14310
GeneTree:ENSGT00390000004003 OMA:AVCLFTP FlyBase:FBgn0031078
RefSeq:NP_728308.1 STRING:Q8IQV9 PRIDE:Q8IQV9
EnsemblMetazoa:FBtr0074798 GeneID:33002 KEGG:dme:Dmel_CG11943
UCSC:CG11943-RB InParanoid:Q8IQV9 PhylomeDB:Q8IQV9 GenomeRNAi:33002
NextBio:781457 ArrayExpress:Q8IQV9 Bgee:Q8IQV9 Uniprot:Q8IQV9
Length = 2090
Score = 145 (56.1 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 127/526 (24%), Positives = 211/526 (40%)
Query: 73 QTLV-AFLKMLSTLASSQEGASKVYELLQ------GKAFRSIGWRTLFDCLSIYDEKFKQ 125
QTL A+LKM+S L + A + +L+ G + ++ W F L Y +
Sbjct: 517 QTLFKAYLKMISGLTRTDFSARCAFNMLRVPQMATGGKY-AVSWDHFFTTLGNYYTSMRN 575
Query: 126 SLQTG----GALL------PD-FQEGDAKALVAYLNVLQKVMENGNS-----IERKNW-F 168
T G + P + +A+ LVA + ++Q V E+ + NW
Sbjct: 576 DFNTNIGMSGETIYRTRSTPKAITQREAEHLVAVMGIIQAVAEHDEVSRIMICDHPNWQT 635
Query: 169 PDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDL-PVVVGTHVG 227
P + L L++ P +LK + + +AA + S IW LE + P V +
Sbjct: 636 PQV--LLGLVACAT-PLFLKAEILHTLAA-LAKSKETARVIWFHLEASQIIPTVPVSR-- 689
Query: 228 NTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVS----DXXXXXXX 283
+ AQ + E+ +IE+R EQY T L LL L+ S
Sbjct: 690 SYAQ------CSLLEEMEQIESRSEQYNLTRGILQLLYTLMTTNLPKSLGAGQRTPAYEG 743
Query: 284 XXXXXYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLT 343
+ V F RAY P EKWQ+ CLK + +L Y D V++
Sbjct: 744 YLKSMINSVLLKFYNRAYKVPSEKWQVGAQCLKLLYYLLATYRPSAMDFLETVDEPPYPG 803
Query: 344 QSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPL-LEKAV--Q 400
+Q+QL E+L+ + R + + E + +Y L LE A+ Q
Sbjct: 804 FHVMMQLQLKS-EMLQLLLCIVEEVRERLDNYNRFQGKKLLEECS-LYALLILEAALAKQ 861
Query: 401 LSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYD-FLPQIQQCSIK 459
+ +LLS R L DH ++ +++YV Y+ +LP+ +IK
Sbjct: 862 NAFFEAHSAANCPILLSGLNRMLLDLNPRSRKPDH--VLNIIKYVTYNSWLPRHALAAIK 919
Query: 460 IMSILSSRMVGLVQLLLKYNAASS----LVEDYAACLELRSEESQIIEKSGDDPGVLIMQ 515
I++ ++ Q+L Y S+ + + + CLE+ + K DD L+ Q
Sbjct: 920 ILASVTQLPNVSTQILSMYGQGSNEKLEIRQGFVECLEMEV----CVGKHDDD---LLDQ 972
Query: 516 LLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEI 561
L ++N ++ +L DLD ER + + YS ++ LE+
Sbjct: 973 LALNN------HVPYLGFGDDLDN--EREMSGER-EYSTIESQLEL 1009
Score = 81 (33.6 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 42/221 (19%), Positives = 97/221 (43%)
Query: 999 QAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCL--MNVSNV 1056
+ ++D DA G + + L+L LD + + + + SRG+L+ L ++ S+
Sbjct: 1586 EKLIDTICHDAVTGHDVCRMLALACLDMISELQAVSTLCDFVASRGYLKHILESLDQSST 1645
Query: 1057 SYQDGKRSL-DTLQRACTXXXXXXXXXRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQG 1115
+ + + D L+ R+++ GA++L + +L +++ K Q
Sbjct: 1646 ALCGILQPVPDHLRPLYVYESRMAFLTRMANS--NVGARLLLTEQALGVLSNMKVYDQQP 1703
Query: 1116 SLRRVA---TKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDF 1172
L+ +P+ L DR R I+ P L L ++ + + + N +V++F
Sbjct: 1704 DLKSSELNRNEPQTFLPSIDDRFRSILLPALSLCDAIVNSLGPRN-----NSAAVQVLNF 1758
Query: 1173 IKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYE 1213
+ H +V+ +L+ D ++Q+ ++ + ++ +E
Sbjct: 1759 LFAHIDMVEAMLRSATPYMDLGHLQQVAVISNLFARASTHE 1799
Score = 65 (27.9 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 37/166 (22%), Positives = 68/166 (40%)
Query: 513 IMQLLIDNISRPAPNITHLLLKFDLDTPIE---RTVLQPKFHYSCLKIILEILEK-VSKP 568
I++L N+S+ PN + LL D+ R L + SC+ ++ +LEK + K
Sbjct: 1031 IIKLFEMNLSQQLPNFVYFLLGVDVLREFMANGRQHLAIEMQSSCVNSVVLLLEKYMDKQ 1090
Query: 569 -------DVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPK 621
+ A + E + L + LC + T + F ++HL ++ P +
Sbjct: 1091 RHSDKYCEHTARIVERIYHLFHGLCANRRTAETILRYFRLTCSDFLLRHLRSL---PFRQ 1147
Query: 622 RNSNQALRISSLHQRAWLLKLLAIE--LHAGYGSSSTHQEACQTIL 665
+ L H LL ++I+ L A +G + + C +L
Sbjct: 1148 HREDHVL-----HAMGHLLNCVSIDVKLAAKHGQMTRFNQMCDILL 1188
Score = 52 (23.4 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 25/119 (21%), Positives = 46/119 (38%)
Query: 793 VKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDA 852
+ I LL N+ ++ A L + W Q+V+V S A+ ++ I+D
Sbjct: 1341 ISTEIMLLLNHAVNINRVRTQRCATLAFMAAWGQLVQVLFSNMPDAVLPATQRRQHIIDI 1400
Query: 853 CLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNG 911
+ I QV+ T + L + ++ C ++ + D+ LSNG
Sbjct: 1401 VEKVLIKVQPIQPIIEISVQVSETVLLLLANLRYCC---YQAEDQSPEDLAAEDSLSNG 1456
Score = 40 (19.1 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 720 MKLSQIVSNMKYDLLAEEILGNPTTSGK 747
M LSQ + N Y LL ++L +G+
Sbjct: 1037 MNLSQQLPNFVYFLLGVDVLREFMANGR 1064
Score = 37 (18.1 bits), Expect = 3.7e-08, Sum P(4) = 3.7e-08
Identities = 25/102 (24%), Positives = 43/102 (42%)
Query: 811 LEEQAAQLHMLTGWSQVVEVSVSRR----ISALGNRSEILYQILDACLGASASPDCSLRM 866
+E + L M G S + + S S + A G+ S + + A LGA + SL+
Sbjct: 1193 MERSSHGLSMELGHSLISQPSSSFLAMDVLPAGGSISAVAHGAGSASLGAPNTGVKSLKP 1252
Query: 867 AFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQL 908
+ + + +L D L G L+ + F D ++ QL
Sbjct: 1253 SLLQETSQGLHVTRLLDILVLEAGTLSQPQLEFFDGHLITQL 1294
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1472 1395 0.00090 124 3 11 22 0.37 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 632 (67 KB)
Total size of DFA: 549 KB (2250 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 109.42u 0.13s 109.55t Elapsed: 00:00:06
Total cpu time: 109.43u 0.13s 109.56t Elapsed: 00:00:06
Start: Tue May 21 08:15:41 2013 End: Tue May 21 08:15:47 2013