Query 000469
Match_columns 1472
No_of_seqs 168 out of 228
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 09:52:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000469.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000469hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF11894 DUF3414: Protein of u 100.0 2E-172 4E-177 1779.0 103.0 1132 16-1232 422-1684(1691)
2 KOG1835 Uncharacterized conser 100.0 3E-113 6E-118 1085.1 76.3 1299 26-1464 282-1703(1704)
3 KOG1835 Uncharacterized conser 99.9 2.7E-21 5.8E-26 249.1 44.0 964 10-1116 444-1577(1704)
4 PF10487 Nup188: Nucleoporin s 99.1 1.2E-08 2.6E-13 134.9 27.8 388 107-536 513-927 (931)
5 PF10508 Proteasom_PSMB: Prote 85.0 15 0.00033 46.8 15.5 184 1002-1207 162-366 (503)
6 KOG4833 Uncharacterized conser 83.0 1.8 3.8E-05 50.8 5.3 68 29-102 324-403 (573)
7 PLN03205 ATR interacting prote 47.9 2.3E+02 0.0051 34.3 12.6 52 552-603 534-597 (652)
8 PF10508 Proteasom_PSMB: Prote 22.9 3.3E+02 0.0072 34.8 9.6 145 35-209 178-327 (503)
9 KOG0889 Histone acetyltransfer 21.9 2.6E+02 0.0056 43.0 8.8 139 285-466 651-796 (3550)
10 PF11707 Npa1: Ribosome 60S bi 18.6 1.1E+03 0.023 28.4 12.3 27 438-465 58-84 (330)
No 1
>PF11894 DUF3414: Protein of unknown function (DUF3414); InterPro: IPR021827 This family of proteins are functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 764 to 2011 amino acids in length. This protein has a conserved LLG sequence motif.
Probab=100.00 E-value=1.8e-172 Score=1778.97 Aligned_cols=1132 Identities=32% Similarity=0.476 Sum_probs=955.7
Q ss_pred cCCCCCC-------CCC--CCcCCCccHHHHHHHHHHHhcCCccccccccccc----------hHHhhhcccCCCcchHH
Q 000469 16 VHDSNLP-------SQQ--DTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLW----------TFVVFAGEDHTNFQTLV 76 (1472)
Q Consensus 16 ~~d~~~~-------~~~--~~~~~~~dlE~fll~ia~~Y~~~P~~~~~~~~fW----------gFi~wa~~~~~~~~~~~ 76 (1472)
|||..++ |++ |+++.++|||+||++||++|++||+++ .+|| ||++||+++++ +++++
T Consensus 422 eed~~~~~~~~~~~~~~~~~~~~~~~dlE~fl~~ia~~Y~~rPe~~---~~FW~d~e~~s~l~gFl~wa~~~~~-~~l~~ 497 (1691)
T PF11894_consen 422 EEDSLLSSQTHQQEGEDPPDDISLRADLERFLLLIAYLYDGRPELA---LEFWSDPEVTSNLYGFLRWASDRNP-SPLVS 497 (1691)
T ss_pred HHHHHHHhHhhhhcCCCCCcccchhhhHHHHHHHHHHHHcCChHHH---HHhCCCcccchhHhHHHHHHhhcCC-chhHH
Confidence 6777777 555 569999999999999999999999998 9999 69999999976 78889
Q ss_pred HHHHHHHHhcCChhhHHHHHHHhhcCC-----CCcccHHHHHHHHHHHHHHhhh-c-cccCC------CCCC--CCChhh
Q 000469 77 AFLKMLSTLASSQEGASKVYELLQGKA-----FRSIGWRTLFDCLSIYDEKFKQ-S-LQTGG------ALLP--DFQEGD 141 (1472)
Q Consensus 77 af~~ML~sLs~g~~~A~~~~~~L~~~~-----~~~vSW~~iF~~L~~Y~~~l~~-~-~~~~~------~~~~--~l~~ee 141 (1472)
|||+||+|||+|++||++||+||++++ .+++||+|||++|++|++++++ . .++.+ ...+ +++|+|
T Consensus 498 af~~ML~sLs~g~~~A~~a~~~L~~~~~~~~~~~~~SW~~if~~L~~Y~~~l~~~~~~~~~~~~~~~~~~~~~~el~~ee 577 (1691)
T PF11894_consen 498 AFLEMLASLSSGPECASAAFNFLKDNSGKGRRSSSVSWDQIFQSLQYYIDKLRQQQQQQQSQSIQRSRSPPPEIELSPEE 577 (1691)
T ss_pred HHHHHHHHHcCChHHHHHHHHHHhhcccCCCCCCcccHHHHHHHHHHHHHHhccccCCCCccccccCCCCCcccCCCHHH
Confidence 999999999999999999999999765 3599999999999999999992 2 22111 1133 369999
Q ss_pred HHHHHHHHHHHHHHHhcCcc-----hhhcccCCChHHHHHhccCCCCChhHHHHHHHHHHHhhhcChhhHHHHHHHHhhc
Q 000469 142 AKALVAYLNVLQKVMENGNS-----IERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQY 216 (1472)
Q Consensus 142 ~~~L~a~L~Li~~V~~~~~~-----~e~~~w~~~i~~Lf~Ll~~~~vp~~Lka~i~~tLaal~~~s~~~a~~iW~~Ld~~ 216 (1472)
++||+|||+||++||++++. +++++|.+ +++||+|++ |+||+.|||++|+||+||+.++++++++||+.||+|
T Consensus 578 ~~~L~a~L~Li~~V~~~s~~ar~~l~~~~~~~~-~~~L~~L~~-~~vp~~Lkaai~~~Laal~~~~~~~~~~iW~~Ld~~ 655 (1691)
T PF11894_consen 578 VEMLSAYLRLISSVVRNSEQARSALLENPNWNP-IDILFGLLS-CPVPPSLKAAIFNALAALAAKSPEIANQIWQLLDQW 655 (1691)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHhCCCCch-HHHHHHHhc-CCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 99999999999999999874 35667876 999999999 699999999999999999655999999999999999
Q ss_pred cCCCccccCCCCCCCcCCCccccHHHHHHHHhhhccCCcchHHHHHHHHHhhcCC------------CCCCCCccc---c
Q 000469 217 DLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEE------------KDVSDRGRR---F 281 (1472)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~gi~~el~eiE~~~~~Yp~t~aFl~LL~~Li~~~------------~~~lg~g~R---~ 281 (1472)
++..+..++.+.. .++..|+..|++++|++.++||+|+||++||++|++|+ |..+|.||| +
T Consensus 656 ~~~~~~~~~~~~~----~~~~~~i~~el~~~e~~~~~y~~t~aFl~Ll~~Li~~~~~~~~~~~~l~~P~~LG~~~R~~Gi 731 (1691)
T PF11894_consen 656 QILSTAPTPSSSA----LPQPSGIQSELEEFESRLEEYPETRAFLQLLNALISPPSDSSFLNDSLPFPENLGAGYRMPGI 731 (1691)
T ss_pred hcCCCCCCCcccc----cCCCccHHHHHHHHHhhhcCCchHHHHHHHHHHHhCCCcccccccccCCCccccCccccCCCc
Confidence 9965532222211 13678999999999999999999999999999999998 677999999 8
Q ss_pred chhHHHHHhhhcCCCCccccCCchhHHHHHHHHHHHHHHHHhccCCCchhhhhhhhccCCcCCC----Cccccc---CcH
Q 000469 282 VGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQS----SPIQMQ---LPV 354 (1472)
Q Consensus 282 ~py~~FV~~~VF~~~~~r~Y~~~~ekw~l~~~cL~~f~~~L~~y~~~~~dl~~~~~~~~~~~~~----~~l~~y---~P~ 354 (1472)
|||++||+++||++ ++|.|+||.|||+++..||++|+++|++|||+ +.....+++.+.+. .++.+| |||
T Consensus 732 ~pY~~fv~~~Vf~~-~~r~y~~~~ekw~l~~~cL~~~~~~L~~f~~~---~i~~~~~~~~~~d~~~~~~~~~~~v~~hP~ 807 (1691)
T PF11894_consen 732 WPYVDFVLDEVFLK-SSRSYKDPSEKWQLALSCLEFFEKCLSSFDPS---FILNSNESNINLDSIVDTSDLATYVKLHPG 807 (1691)
T ss_pred HHHHHHHHHHHHhc-cchhcCCHHHHHHHHHHHHHHHHHHHHhCCHH---HHhhcccccccccccccccchhhhhhcCcH
Confidence 99999999999999 99999999999999999999999999999985 33333333332222 456666 899
Q ss_pred HHHHHHhccChHHHHHHHHhhccchhhHhhhhccCccChHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccc------chh
Q 000469 355 LELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQ------PVD 428 (1472)
Q Consensus 355 ~~vm~~~L~~~~v~~~L~~ii~~Gvd~l~~~~~~~~y~~~l~~~v~~aL~Il~~vL~~q~~f~d~lrpl~~------~~d 428 (1472)
++||.+||+++++++.||+|+++|+|.+.++.+. .+++++++|+++||+||+++|++|++|+|.+||+++ +.+
T Consensus 808 ~~vm~~~l~~~~~~~~l~~ii~~g~~~l~~~~~~-~~~~~l~~~v~~~L~Il~~vL~~Q~~f~~~~~p~~~~~~~~~~~~ 886 (1691)
T PF11894_consen 808 FRVMLELLFDEKVLRSLFSIIDEGVDSLDSYSPD-PGGSPLEECVLRSLRILNRVLELQDTFLDVVRPILKSDIIYRPLD 886 (1691)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHhHHHHhhcCcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccChH
Confidence 9999779999999999999999999999777653 257999999999999999999999999999999887 344
Q ss_pred hhh----------ccCchHHHHHHhhhcCCCchhhHHHHHHHHHHHhh--hh-------------hhHHHHHhhcchhHH
Q 000469 429 VIL----------SQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSS--RM-------------VGLVQLLLKYNAASS 483 (1472)
Q Consensus 429 ~lL----------s~~~~~I~~L~~Yv~~~~~p~ial~SikIL~~ls~--r~-------------~~l~~~l~~~~es~~ 483 (1472)
.++ .++...|++||+|||.++ |+|++.|+|||++++. .. ++++++|++++|+.+
T Consensus 887 ~~~~~~~sf~~~~~~~l~iv~~l~l~~~~~~-p~ial~alkIL~~ls~s~~~~~~~~~~~~~~~~n~ll~~l~~~~es~~ 965 (1691)
T PF11894_consen 887 VLLLGLNSFEDAILFNLNIVVHLGLYVGSDH-PEIALLALKILSKLSSSPKFNSADSFSSRRLRRNRLLTILESSDESER 965 (1691)
T ss_pred HHhhccCcchhhhcchHHHHHHhHhhcCCCC-HHHHHHHHHHHHHHHcCCCCcccccccccccchhHHHHHHhcccHHHH
Confidence 433 367788999999999877 9999999999999983 22 579999999999999
Q ss_pred HHHHHHHHhccccccccc-cccCCCChHHHHHHHHHhcCCCC--CChHHHhhhCCccCCCCccccccC----CCCcchHH
Q 000469 484 LVEDYAACLELRSEESQI-IEKSGDDPGVLIMQLLIDNISRP--APNITHLLLKFDLDTPIERTVLQP----KFHYSCLK 556 (1472)
Q Consensus 484 I~~~Fv~~Le~~~~~~~~-~e~~~~~~k~~IL~lLl~nL~~~--~PnlAH~LLGFdv~~~~~~~~l~p----~~~~ScLh 556 (1472)
|++|||+|||.+.++.++ .+.....+|..||+||++||+.+ +||||||||||++.++...+..+| ++++||||
T Consensus 966 I~~~fv~~Le~~~~~~~~~~~~~~~~ik~~IL~lL~~~L~~~~~~PniAHlLLGF~~~~~~~~~~~~~~g~~~~~~S~lh 1045 (1691)
T PF11894_consen 966 IRFGFVEQLEADIDEFEEGAESPSLSIKLAILDLLLENLSQPPPAPNIAHLLLGFDVRGNVSSLSLQDPGFFGSPRSCLH 1045 (1691)
T ss_pred HHHHHHHHHccccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcHHHHHhCCCcCCchhhcccccccccCCcCcHHH
Confidence 999999999998765443 33334679999999999999755 999999999999998877888885 46799999
Q ss_pred HHHHHHHhcCCCC-------CchhHHHHHHHHHHHhhcCCCCcHHHHHHHhccccchHHHhhhhcC-CCCCCCCCCch--
Q 000469 557 IILEILEKVSKPD-------VNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIG-VAPLPKRNSNQ-- 626 (1472)
Q Consensus 557 sIL~lL~~~~~~~-------~~p~L~e~~~~LL~~Lc~~p~TS~~tLr~LR~~~~dff~~~L~~~~-i~~l~~~~~~~-- 626 (1472)
+||++|++++++. .+|+|+|+||+|||+||+||+||+|||||||+++ |||.+|+...| ++|.+.|+|..
T Consensus 1046 siL~lL~~~~~~~~~~~~~~~~~~L~e~~~~ll~~Lc~~p~TS~~~L~~LR~~~-df~~~~l~~~p~i~~~~~w~g~~~~ 1124 (1691)
T PF11894_consen 1046 SILDLLESSLDSDSNSDIDYWPPRLAELCYRLLYKLCSSPLTSEPTLRYLRSNN-DFFFRHLSSLPFIDPQTIWDGERIS 1124 (1691)
T ss_pred HHHHHHHhccccccCcchhcccHHHHHHHHHHHHHHHcCCcchHHHHHHHHhHH-HHHHHHHHcCCCCCccccccccccc
Confidence 9999999987632 2489999999999999999999999999999975 99999999999 78999999853
Q ss_pred ----------hHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHhhcCCCccC-CCCccccccccccccccccC
Q 000469 627 ----------ALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIE-DTDRTLSLPFMVQNITEHAG 695 (1472)
Q Consensus 627 ----------~~~~s~L~~rs~lL~~~AlEL~~~~~~~s~~~~~~~~ll~~L~g~~~~~-~~~~~~~~s~~~~~~~~~~~ 695 (1472)
.++.+||++|||+|||+|+|||.++. .++++.+++|++.|+|..... .++.
T Consensus 1125 ~~~f~~~~~~~~~~~~L~~Rs~lL~~~AlEL~~~s~--~~~~s~~~~l~~~Ll~~~~~~~~~~~---------------- 1186 (1691)
T PF11894_consen 1125 DPDFFLSTSASALISFLHQRSWLLKYLALELHSLSQ--SGQRSQKRRLLSLLLGNSQSSTDDGE---------------- 1186 (1691)
T ss_pred ccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHhccccccCCCCC----------------
Confidence 27889999999999999999999985 347788999999999921111 0111
Q ss_pred cccccchhhhhhcccccCCCCChhhhhhhhhhhcchhhHHHHHhcCCCCCCCCCceeecCCCcccccHHHHHHHHHHhhh
Q 000469 696 TRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLN 775 (1472)
Q Consensus 696 ~~~~~~~~il~lLd~l~F~~~~~~~~~p~~~~~~~~~~~~~~~~~~c~~~~~g~~~~~~~~g~~l~di~~L~~~L~~e~~ 775 (1472)
....+.||+|||+++|.+ ......|++ ++|.+..++..+.+|. .+.+|++++|+.++++++..+.+
T Consensus 1187 --~~~~~~i~~lld~l~~~~-~~~~~~~~l--~~f~~~~l~~~~~~c~---------~~~~g~~~~Dl~~l~~lL~~~~~ 1252 (1691)
T PF11894_consen 1187 --PIINPSIFDLLDFLDFDF-SWEFPPPQL--EFFDDLDLELCLEECT---------DSEGGVRLYDLSKLHELLQLERK 1252 (1691)
T ss_pred --CccccHHHHHHhhhCCCc-ccCCCCchh--hhhchhcHHHHHHhcc---------ccCCCCeEeeHHHHHHHHHHHHH
Confidence 124556999999999999 222334442 4455556666666672 13446789999999999999998
Q ss_pred hccccccCCCchhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHhhh
Q 000469 776 IVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLG 855 (1472)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~Ei~~il~~~~~~N~~~~~~~a~l~~L~aW~qLv~V~~s~~~~~~~~r~~~Il~~L~~il~ 855 (1472)
..+++... +.++.+.+++|++.|++|++++|+.++.++||+++|+||+|||+|++++|......|.++|+|+|+.++|
T Consensus 1253 ~~~~~~~~--~~~~~~~v~~E~~~il~~~~~~N~~~~~~~a~~~~L~sW~qLv~V~~~~~~l~~~~r~~~ile~Lq~iLp 1330 (1691)
T PF11894_consen 1253 SLQSSGQL--TAQQREAVEEEIQKILEYAVARNRRRELAAAQLHALESWRQLVEVLVSDCPLSPDQRSNFILELLQAILP 1330 (1691)
T ss_pred Hhhccccc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 88775211 4567888999999999999999999999999999999999999999999998889999999999999999
Q ss_pred ccC-CCccchHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcccchhhhhhhccCcchhHHHHHHHHHHHhcCCCCHHHH
Q 000469 856 ASA-SPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALR 934 (1472)
Q Consensus 856 ki~-~~~~~~~~a~~Ls~l~l~Ll~~Lr~~~~~~~~~~~~~~~~~~d~~~~~~L~~~~~~~iL~~ll~~Il~~~ss~~lR 934 (1472)
|++ ..+.+++++.++++++++|+++||.++..... ....++++.+++++||+.+|+||+++++++.+|
T Consensus 1331 kl~~~~~~~~~~a~~ls~l~l~L~~~L~~~~~~~~~-----------~~~~~~l~~~~L~~lf~~~l~~Il~~~ss~~lR 1399 (1691)
T PF11894_consen 1331 KLEDYPECDPEFAEELSSLALTLLAKLRQDRISQSD-----------SEDSGSLPDSRLHQLFKSCLQGILSSGSSQRLR 1399 (1691)
T ss_pred HhhcccccCHHHHHHHHHHHHHHHHHHHhhhhcccc-----------cccccccchhHHHHHHHHHHHHHhccCCCHhHH
Confidence 999 58889999999999999999999998641100 111345788899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCchhhhHhhhhccccCcchhhhhhhhHHHHhHHHHHHHHHhhhhhHHHHHhccccCCCc
Q 000469 935 RRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSE 1014 (1472)
Q Consensus 935 ~~lY~~l~~yLq~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~e~LidvIc~DA~~G~~ 1014 (1472)
+|+|++|++||+++.+..+.+...... .+..+ ......++++++++|+++|+||+|+||+||++|+|
T Consensus 1400 ~~lY~~l~~yL~~~~~~~~~~~~~~~~----~~~~~---------~~~~~~l~~~~~~~i~~~g~~Li~vic~DA~~g~~ 1466 (1691)
T PF11894_consen 1400 SNLYAILLNYLQIVQKNSSLEDGQSLS----SRLDD---------SSEQSSLEKMNLQIIKSYGERLIDVICRDAIDGHG 1466 (1691)
T ss_pred HHHHHHHHHHHHHhcccccccchhcch----hhccc---------chhhHHHHHHHHHHHHHhhhHHHHHHHhHhhcCcc
Confidence 999999999999998755311111111 00000 11223589999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcc---CcchHHHHHHhcCcHHHHHHHhhhhh--hhcccC-CcchhhHHHHHHHHHHHHHHHhccc
Q 000469 1015 PGKTLSLYVLDALICID---HEKYFLNQLQSRGFLRSCLMNVSNVS--YQDGKR-SLDTLQRACTLEAELALLLRISHKY 1088 (1472)
Q Consensus 1015 ~~r~~Al~lLd~Lv~ld---~~~~il~~L~~~g~L~~lv~sl~~~~--L~~~~~-~~~~l~~L~~yea~maLLlRiAq~~ 1088 (1472)
+|||+|++|||+|+++| .+++|+++|.|+|||+++|+++++++ +++... .|+++++||+|||+|+||+||||
T Consensus 1467 ~~r~~Al~lLdaLv~ld~~~~~~~il~~L~~~g~L~~lv~sl~~~d~~l~~~~~~~~~~l~~L~~yea~laLL~RiAq-- 1544 (1691)
T PF11894_consen 1467 VCRILALSLLDALVQLDSQEKSNFILEYLSRRGYLKSLVDSLKRTDEDLQASLQPIPDSLRELYVYEAKLALLLRIAQ-- 1544 (1691)
T ss_pred cHHHHHHHHHHHHHHhcccccccHHHHHHHhCCcHHHHHHHHHhhHHHHHhccCCCCcchHhHHHHHHHHHHHHHHHc--
Confidence 99999999999999999 56999999999999999999998654 888666 89999999999999999999999
Q ss_pred CcchHHHHHhCchHHHhhhcccccccCccccc--ccC--CCccCCchhhhhhHhHHHHHHHHHHHHHhhccCCccchhHH
Q 000469 1089 GKSGAQVLFSMGSLEHIASCKAVGLQGSLRRV--ATK--PRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNK 1164 (1472)
Q Consensus 1089 tr~GA~~Ll~~~l~~~L~~~~~l~~~P~~~~~--~~~--~~~~~p~~~~ry~~lL~PvlrL~~svl~~~~s~g~~~~n~~ 1164 (1472)
||.||++|+++|+|++|++|+||++|||.+.. .++ +..+ |++.+|||++|+||||||+++++++ | ++|++
T Consensus 1545 tr~GA~~Ll~~~lf~~L~~~~~l~~~Pdl~~~~~~~~~~~~~~-p~~~~ry~~lL~PvlrLi~ail~s~---G--~~n~~ 1618 (1691)
T PF11894_consen 1545 TRSGAEALLQSGLFQVLAECKFLDADPDLGLDLMFDNSDPMSF-PSALERYYQLLVPVLRLISAILSSL---G--SSNKS 1618 (1691)
T ss_pred ChHHHHHHHHCCHHHHHHcCCCcCCCCccchhhcccccccccC-chHHHHHHHHHHHHHHHHHHHHHhc---C--cccHH
Confidence 89999999999999999999999999987532 222 2223 8999999999999999998877776 5 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHhccccccCchhhhHHHHHHHHHHHh
Q 000469 1165 VVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLF 1232 (1472)
Q Consensus 1165 ~~~qv~~Fl~~h~~lv~~vLr~~~~~~~~~~Leel~ll~~ll~~~~~~~~~~e~~~~~~l~~lm~~l~ 1232 (1472)
++.||++||.+|+++|++|||++++..+.+..++..++++...+.+++++.+. ..++++.++..++
T Consensus 1619 ~~~qv~~FL~~h~~lv~~vLk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~l~~~f~ 1684 (1691)
T PF11894_consen 1619 AVQQVLNFLKAHRDLVVGVLKRDALIGNLGSSEIYSLVNSKLSKDWPYEESRL--SQQGLEELVKLFM 1684 (1691)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccccccchhhhhhhhhhhhhhhhhhH--HHHHHHHHHHHHh
Confidence 99999999999999999999999999988888888888888888877766322 1456666665544
No 2
>KOG1835 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=3e-113 Score=1085.15 Aligned_cols=1299 Identities=27% Similarity=0.332 Sum_probs=996.4
Q ss_pred CCcCCCccHHHHHHHHHHHhcCCccccccccccc---------------------hHHhhhcccCCCcchHHHHHHHHHH
Q 000469 26 DTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLW---------------------TFVVFAGEDHTNFQTLVAFLKMLST 84 (1472)
Q Consensus 26 ~~~~~~~dlE~fll~ia~~Y~~~P~~~~~~~~fW---------------------gFi~wa~~~~~~~~~~~af~~ML~s 84 (1472)
.+..-+.|++.+++.|+..+...|.....+.+|| .|++.|++.. ++..+.++.+|+++
T Consensus 282 ~~~~lr~~~~~~ml~l~~~~~~~p~~~~~~~e~~~~~~p~~v~~~~~~s~~~~l~sfl~~a~~~l-~~t~~~~~~ki~s~ 360 (1704)
T KOG1835|consen 282 PPPQLRSNAMCLMLQLAEAVTSKPIAGSLSDELWIPNDPVIVERVKDRSRRVVLFSFLRQAIDLL-PHTNYIHQLKIFSG 360 (1704)
T ss_pred CCcccchhHHHHHHHHHHHhcCCccccchhHHhcCCCCchhhHhhhhhhHHHHHHHHHHHhcccc-chhhHHHHHHHHHH
Confidence 4556689999999999999999999988888888 4999999885 36669999999999
Q ss_pred hcC--ChhhHHHHHHHhhcCCCCcccHHHHHHHHHHHHHHhhhccccCCCC----CCCCChhhHHHHHHHHHHHHHHHhc
Q 000469 85 LAS--SQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGAL----LPDFQEGDAKALVAYLNVLQKVMEN 158 (1472)
Q Consensus 85 Ls~--g~~~A~~~~~~L~~~~~~~vSW~~iF~~L~~Y~~~l~~~~~~~~~~----~~~l~~ee~~~L~a~L~Li~~V~~~ 158 (1472)
++. ...++.+.++-..|+ .++|.|+|+++..|++.+|++.++++++ .+.+++.++.+|.+|++++++|++.
T Consensus 361 l~~~~~~~~p~~~~e~~~g~---gv~W~~ff~~~~~y~~~~r~~~~~~~~~i~~~l~t~~Q~~~~~l~a~l~vlq~iie~ 437 (1704)
T KOG1835|consen 361 LTTSLLSYFPAKLVETERGN---GVSWLHFFDSLRSYQTTTRKDLPPAGSTIYRTLKTIAQKEVSYLVAFLNVLQTIIEE 437 (1704)
T ss_pred HHHHHHHhcchhhhhhhccC---CccchhhhhhHhhhhHHhhccCCCcccceeeecchHHHHHHhhchhHHHHHHHHHhh
Confidence 999 334445555555555 3999999999999999999998876554 4457789999999999999999994
Q ss_pred Ccc---hhhcccCCChHHHHHhccC-CCCChhHHHHHHHHHHHhhhcChhhHHHHHHHHhhccCCCccccCCCCCCCcCC
Q 000469 159 GNS---IERKNWFPDIEPLFKLLSY-ENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIA 234 (1472)
Q Consensus 159 ~~~---~e~~~w~~~i~~Lf~Ll~~-~~vp~~Lka~i~~tLaal~~~s~~~a~~iW~~Ld~~~~~~~~~~~~~~~~~~~~ 234 (1472)
++. |.+++|.| -+.++|+ |++|+.||+++.++|+||+ +|..+|..+|..+++... +.+++
T Consensus 438 ~~~~~~c~~p~~ep----~~~llg~~~~~p~~lk~eL~~tlaaf~-----~a~siw~~lE~~~~~~~v--~v~s~----- 501 (1704)
T KOG1835|consen 438 DERFLLCFHPDWEP----QVVLLGYQCNIPTYLKAELLKTLAAFS-----MAFSIWFFLESCQLLETV--RVWSS----- 501 (1704)
T ss_pred chHHHhcCCCcccc----chhhhccccccchHHHHHHHHHHHHHH-----HHHHHHHHHHhcccceee--ecCcc-----
Confidence 432 55666654 3444444 8999999999999999999 789999999999985442 34443
Q ss_pred CccccHHHHHHHHhhhccCCcchHHHHHHHHHhhcCCCCCCCCccccchhHHHHHhhhcCCCCccccCCchhHHHHHHHH
Q 000469 235 GQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVAC 314 (1472)
Q Consensus 235 ~~~~gi~~el~eiE~~~~~Yp~t~aFl~LL~~Li~~~~~~lg~g~R~~py~~FV~~~VF~~~~~r~Y~~~~ekw~l~~~c 314 (1472)
++..+|.+||+|+|+|.+.||.|++|+.|+.+ .+|.|+ +|+.++++|+|++|.|||+++..|
T Consensus 502 ~~q~~i~~e~~eiear~cky~lTrs~lyli~s-------slgag~-----------~v~l~gy~ray~~~sekW~~~~~c 563 (1704)
T KOG1835|consen 502 HQQISIIVEFNEIEARVCKYNLTRSFLYLIFS-------SLGAGP-----------SVALKGYDRAYREPSEKWQVIAQC 563 (1704)
T ss_pred cchhHHHHHHHHHHHHHhcCccHHHHHHHHHH-------hhccCc-----------hhHHHHHHHHhhcccHhHHHHHHH
Confidence 55666999999999999999999999999997 567775 899999999999999999999999
Q ss_pred HHHHHHHHhccCCCchhhhhhhhccCCcCCCCcccccCcHHHHHHHhccChHHHHHHHHhhccchhhHhhhhccCccC-h
Q 000469 315 LKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYG-P 393 (1472)
Q Consensus 315 L~~f~~~L~~y~~~~~dl~~~~~~~~~~~~~~~l~~y~P~~~vm~~~L~~~~v~~~L~~ii~~Gvd~l~~~~~~~~y~-~ 393 (1472)
|+.+.+.|+.|+|+.+|++...+ +||+.||.+....+++...+..|+..++..+ ++... |. +
T Consensus 564 lq~~~~~Ls~y~~q~~d~~~f~e--------------~pgf~I~~~lq~~s~liela~~im~s~v~~l-d~~~~--~q~~ 626 (1704)
T KOG1835|consen 564 LQSYTMLLSTYFPQLEDLLQFTE--------------RPGFKIDIPLQLESGLIELALIIMESSVLRL-DEYAA--FQFK 626 (1704)
T ss_pred HHHHHHHhcccchhhhhhhcccc--------------CCccccchhhhhhhhHHHHHHHHHHHHHHHH-hhhcc--cccc
Confidence 99999999999999888554332 5778888877777787777777777766654 22211 11 3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhh-------------ccccchhhhhccCchHHHHHHhhhcCCCchhhHHHHHHH
Q 000469 394 LLEKAVQLSLEIVILVFEKDLLLSDFWR-------------PLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKI 460 (1472)
Q Consensus 394 ~l~~~v~~aL~Il~~vL~~q~~f~d~lr-------------pl~~~~d~lLs~~~~~I~~L~~Yv~~~~~p~ial~SikI 460 (1472)
..+++.+.|+-+....+.+|+.+.+.++ |+..+.+.. ..+++|+++.+|+.++.+|.++..|+||
T Consensus 627 ~~~~~~l~~~~~~~L~~~~~~sv~~~l~~a~~~Ll~~~l~r~L~~~npr~--wsadhv~ni~~y~~~g~lp~~~~~~iki 704 (1704)
T KOG1835|consen 627 EDEKSSLSKTLVLSLELAKQNSVPILLVAAMLDLLVSALARKLKGSNPRI--WSADHVLNILKYSSDGGLPMGAQAAIKI 704 (1704)
T ss_pred ccccccHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhhhhhcccchhh--hhhhHHHHHhhhhhcCCchHhHHHHHHH
Confidence 4567788888888888888877665443 222222222 3446699999999998899999999999
Q ss_pred HHHHhhh--hhhHHHHHhhcchhHHHHHHHHHHhcc--ccccccccccCCCChHHHHHHHHHhcCCCCCChHHHhhhCCc
Q 000469 461 MSILSSR--MVGLVQLLLKYNAASSLVEDYAACLEL--RSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFD 536 (1472)
Q Consensus 461 L~~ls~r--~~~l~~~l~~~~es~~I~~~Fv~~Le~--~~~~~~~~e~~~~~~k~~IL~lLl~nL~~~~PnlAH~LLGFd 536 (1472)
+..++.. ...++..+.+...+..++.+|++|||. ..++....+....+++ .|..++..|++++.||++|+|+||+
T Consensus 705 l~~vs~~~~v~~Lv~~l~~~~~~~el~~~fv~cl~~~~r~e~g~~le~~~~~lg-~I~~l~~~~~~~~~p~v~~~llg~~ 783 (1704)
T KOG1835|consen 705 LECVSCVYNVGQLVKNLITLLMSRELPEGFVECLEEVTRLEEGLVLEFSPRSLG-SIVQLFELNLNSLLPNVVLLLLGID 783 (1704)
T ss_pred HHHhcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhHHHhhcchHHHH-HHHHHHHhhccccCcchHHHhhhcc
Confidence 9999822 224777777777889999999999993 3333334455556667 8999999999999999999999999
Q ss_pred cCCCCccccccCCCCcchHHHHHHHHHhcCCCCCchhHHHHHHHHHHHhhcCCCCcHHHHHHHhccccchHHHhhhhcCC
Q 000469 537 LDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGV 616 (1472)
Q Consensus 537 v~~~~~~~~l~p~~~~ScLhsIL~lL~~~~~~~~~p~L~e~~~~LL~~Lc~~p~TS~~tLr~LR~~~~dff~~~L~~~~i 616 (1472)
...+++.+.+++..+++|+|.++.+|++.+.++..+++.|.||++++.||.||.|+.|+|||||+...+|+..||...++
T Consensus 784 ~~r~v~~~~lqI~~~~sCl~~il~mLeki~~~~~~~~~~e~~~~l~~~l~~~p~tA~p~lryL~t~~~~fll~~L~~~gf 863 (1704)
T KOG1835|consen 784 LKRAVMSNVLQIAIQYSCLNDILAMLEKIPRVSINEDLQEHNYNLFTYLCACPDTAIPILRYLSTEKAYFLLFHLVALGF 863 (1704)
T ss_pred cchhhhccCcchhhHHHHHHHHHHHHHhCCccccchhHHHHhhhhhhhccCCccchHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999987788999999999999999999999999999997777999999999665
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHhhcCCCccC------------CCCcccccc
Q 000469 617 APLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIE------------DTDRTLSLP 684 (1472)
Q Consensus 617 ~~l~~~~~~~~~~~s~L~~rs~lL~~~AlEL~~~~~~~s~~~~~~~~ll~~L~g~~~~~------------~~~~~~~~s 684 (1472)
..++ ...++.+++++|+.+.+|++.+.++. +. +++.+++..... ..|+.--..
T Consensus 864 ~ql~------~~~i~~lnq~~~l~k~~ai~~~vlsl--~~-------~~shl~~~~~~h~~~~~~l~d~~p~~g~~ag~~ 928 (1704)
T KOG1835|consen 864 DQLS------EIMISSLNQVSWLPKLLAIALTVLSL--QR-------HYSHLFPDELVHGLYAAFLRDVYPTRGERAGLE 928 (1704)
T ss_pred cccH------HHHhccchHHHHHHHHHHHHhccchH--HH-------HHHhccchhhhhhhHHHHhhhhcCcccccchhH
Confidence 4433 25668899999999999999999863 22 333333222111 011000000
Q ss_pred ccc-c-ccccccC---cccccchhhhhhcccccCCCCChhhhhhhhhhhcchhhHHHHHhcCCCCCCCCCceeecCCCcc
Q 000469 685 FMV-Q-NITEHAG---TRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDR 759 (1472)
Q Consensus 685 ~~~-~-~~~~~~~---~~~~~~~~il~lLd~l~F~~~~~~~~~p~~~~~~~~~~~~~~~~~~c~~~~~g~~~~~~~~g~~ 759 (1472)
..+ . .+..+.+ ..+.....+..++|+|.+... ....|+ .++|+...+.+++.+|+.. +.+|+-
T Consensus 929 ~i~~~n~~vahl~~l~~~~~~~~~~~~ildiL~~~~~--~~~~~~--l~~fdr~~l~~i~~~~e~~--------a~~~~~ 996 (1704)
T KOG1835|consen 929 SIRSRNSAVAHLRALLVGSCDQSILTNILDILAKLSD--TENFMQ--LPNFDRNKLLQILIETESS--------ARRIDV 996 (1704)
T ss_pred HhhcCchHHHHHHHHHhcCchHHHHHHHHHHHHHHhc--CCCccc--cCCcccchhhHHHHHhhcc--------chhhhh
Confidence 000 0 0011111 222333566677777666652 111122 3677888889999998843 222232
Q ss_pred cccHHHHHHHHHHhhhhccccccCCCchhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcc---c
Q 000469 760 LIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRR---I 836 (1472)
Q Consensus 760 l~di~~L~~~L~~e~~~~~~~~~~~~~~~~~~~~~~Ei~~il~~~~~~N~~~~~~~a~l~~L~aW~qLv~V~~s~~---~ 836 (1472)
-++..+++..|..+...+++.. +..+...+.+||..++.|.+.+|+..+...|+++++.+|.|+||++++.| .
T Consensus 997 t~~~~~l~~~L~~~~~ll~s~~----s~~~~~~~~~~i~~Ll~l~~~in~v~~~~~a~~~fl~~w~qlve~~~S~m~~~l 1072 (1704)
T KOG1835|consen 997 TRNSNKLTQVLTLELYLLDSRP----SKAQLKELYETISVLLGLGVVINRVLQFVMAKLHFLASWSQLVESLFSLMPRLL 1072 (1704)
T ss_pred hhhhHHHHHHHHHHHHHHhhhh----hhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhcchhHHHHHHHHHhHHHh
Confidence 3556788888888887777652 33455667799999999999999999999999999999999999999877 4
Q ss_pred cchhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcccchhhhhhhccCcch----
Q 000469 837 SALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGA---- 912 (1472)
Q Consensus 837 ~~~~~r~~~Il~~L~~il~ki~~~~~~~~~a~~Ls~l~l~Ll~~Lr~~~~~~~~~~~~~~~~~~d~~~~~~L~~~~---- 912 (1472)
.+++.|.++++++++.++.+..+.++-...+..++++++++++++|. .+... .-..|+ ++++...-+.++...
T Consensus 1073 ~~~~~rs~ii~~im~~vl~~~l~i~~~lc~~p~~s~~~ls~ia~l~~-~f~~~-ai~~d~-~cft~~~i~~~~~~g~ss~ 1149 (1704)
T KOG1835|consen 1073 SSITPRSKIIYDIMRSVLIAALEISPFLCSAPLTSEVVLSLIAKLRG-VFAVR-AIVGDP-TCFTQVEISALSTGGHSSR 1149 (1704)
T ss_pred hhhcCCcchhhHhhHHHHHhhcCchHHHHhhhHHHHHHHHHHHhccc-ceehh-hhcCCc-ceeeccccccCCCCCcchh
Confidence 55689999999999999999888888899999999999999999986 21110 000111 122111112233322
Q ss_pred hHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHhhhhccccCcchhhhhhhhHHHHhHHHHHH
Q 000469 913 CHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFS 992 (1472)
Q Consensus 913 ~~~iL~~ll~~Il~~~ss~~lR~~lY~~l~~yLq~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~ 992 (1472)
...|+.++++ -.+++++++.|.++|++..+|++...+ ++-+.+....+....++..+...++.+...+.+++++..
T Consensus 1150 l~~i~~~ll~-~~S~~~~r~~~~~ll~s~i~y~~~a~~---~de~~~yv~sLI~~~e~~~~~el~q~~~~f~~L~~~n~~ 1225 (1704)
T KOG1835|consen 1150 LEKIVSALLR-SLSSLVSRRTQMNLLGSLIHYAQIAGR---SDEPLEYVASLIRNAEVPRKLELLQPEDVFSDLARLNIL 1225 (1704)
T ss_pred HHHHHHHHHH-hhhhhHHHHHHHHHHHhHHHHHHHhcC---CCcHHHHHHHHHHhhhccccchhcccchHHHHHHHhhhh
Confidence 3445555555 334457899999999999988777753 344556666777777777777777778888899999999
Q ss_pred HHHhhhhhHHHHHhccccCCCchhHHHHHHHHHHHHhccCcchHHHHHHhcCcHHHHHHHhhhhhhhcccC-CcchhhHH
Q 000469 993 TLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKR-SLDTLQRA 1071 (1472)
Q Consensus 993 ~i~~~~e~LidvIc~DA~~G~~~~r~~Al~lLd~Lv~ld~~~~il~~L~~~g~L~~lv~sl~~~~L~~~~~-~~~~l~~L 1071 (1472)
+|...|++++|++|+||++||++|||.++.|+|.++.++..+.|+..+.+ ||++.+++|+.+..+++..+ -|+.++++
T Consensus 1226 ~I~~~~~~il~~~~~da~~g~~l~rml~l~~l~~i~~~~~~~~~m~~i~~-gy~~~~l~Sl~~~s~~~~~s~l~~~l~~l 1304 (1704)
T KOG1835|consen 1226 IIACLGENILDTFCYDALYGHELGRMLILYVLDEISDFQKVQKLMLGILR-GYLAEILASLSESSLESKLSPLEDQLRAL 1304 (1704)
T ss_pred hhccchhhhhhhhhccCccHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhhcccCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999777888888 88999999
Q ss_pred HHHHHHHHHHHHHhcccCcchHHHHHhCchHHHhhhcccccccCccccc----ccCCCccCCchhhhhhHhHHHHHHHHH
Q 000469 1072 CTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRV----ATKPRRALGGDIDRQRMIVTPMLRLVF 1147 (1472)
Q Consensus 1072 ~~yea~maLLlRiAq~~tr~GA~~Ll~~~l~~~L~~~~~l~~~P~~~~~----~~~~~~~~p~~~~ry~~lL~PvlrL~~ 1147 (1472)
+|||+|+|++|||. .+.||..|+-.|+..+|++|.++|+.|+.... ..++..|+|...+||++++.|+|.+|.
T Consensus 1305 -~~e~~~afltria~--~~~ga~~ll~~~A~~~l~~~~V~d~k~~~~~~s~fi~~~~~~~lP~i~d~~r~~l~p~l~l~s 1381 (1704)
T KOG1835|consen 1305 -VYEAKMAFLTRIAH--IKRGALYLLILGAWGVLASCLVTDCKPEHSLVSMFITEVPGTFLPKILDRFREILLPALSLTS 1381 (1704)
T ss_pred -HHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHhheeEeecCCCcchHHHHHHhcccccCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999 89999999999999999999999999988542 357788999999999999999999998
Q ss_pred HHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHhcccCCCChhhHHHHHHHHHHHHhccccccCchhhhHHHHHHH
Q 000469 1148 SLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGM 1227 (1472)
Q Consensus 1148 svl~~~~s~g~~~~n~~~~~qv~~Fl~~h~~lv~~vLr~~~~~~~~~~Leel~ll~~ll~~~~~~~~~~e~~~~~~l~~l 1227 (1472)
.++-+. + +++++++.++.+|+..|++++.+++| .+.++..+++|..+++|+++++++..+.|-.|++||+.-.
T Consensus 1382 ~i~~si---~--p~~~kav~~v~~f~~~h~~l~kt~lr--~~~~d~v~l~~v~ll~glis~~~s~de~d~~g~vq~l~lg 1454 (1704)
T KOG1835|consen 1382 VILTSI---Q--PRDNKAVRDVGQFLKTHRDLFKTLLR--KNSMDTVHLQEVALLDGLISRVESSDEIDSEGRVQRLLLG 1454 (1704)
T ss_pred HHHHhh---c--cchhHHHHHHHHHHHHHHHHHHHHHc--CCccchHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHH
Confidence 766655 4 88999999999999999999999999 6778999999999999999999983332224455555444
Q ss_pred HHHHhhhhhhhhc---c--ccC-cchhh--hHhhHHHHHHHHHHHHHHHHHHHHhhccccccc---------ccccCCCC
Q 000469 1228 MSSLFSSDLENLT---F--SQS-ARSLE--NQRKSELKKFQLCFSLSSYLYFMVTKKSLRLQV---------SRSLDDYN 1290 (1472)
Q Consensus 1228 m~~l~~~~~~~~~---~--~~~-~~~~~--~~~~~~~~~~~i~~nl~~Y~r~~v~~~~~~~~~---------~~~~~~~~ 1290 (1472)
+. .+|..+.+ . +++ ...+. ++...++...+||.|++.||+..++++++..+. ++++...+
T Consensus 1455 ~~---~~f~~s~~~~~~~~q~d~i~~d~~~k~~~~~~f~~~i~~~l~~~~~~~l~s~s~~~~~al~llt~~~~~v~~~l~ 1531 (1704)
T KOG1835|consen 1455 SL---KLFPKSRPAAGIGLQNDLILEDLKSKLLICNLFLKQIVDNLLKYCLLLLDSSSKLSTAALLLLTTVLSDVTDLLY 1531 (1704)
T ss_pred HH---HHhhccchhhhhccccCccchhhHHhHHHHHHHHHHHhHHHHHHHHHHhhccchhHHHHHHHccccccchhhhhh
Confidence 44 44554321 1 222 22222 221346666889999999999999999887752 22222112
Q ss_pred CCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccChhhHHHHHhhhcccccCCCchhHHHHHHHHHHHHH
Q 000469 1291 TNSGLQQLTLTSLGSLLNSATAVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMC 1370 (1472)
Q Consensus 1291 ~~~~~~~p~L~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~l~~~~~~~~~~~~~~~~~~~r~~a~~~l~ 1370 (1472)
-...++.+ ++..+-.+-+..+.++..+ .++-+|.+++||+-+. .++.-|++|+++++++
T Consensus 1532 ~~~~~~~~---v~~~Ir~~~~~~i~~ll~q---~d~v~~i~a~l~~~~~---------------~p~~~kq~yl~~~~~~ 1590 (1704)
T KOG1835|consen 1532 KSNYKKAT---VLHFIRRYGTREIGELLSQ---EDAVLEILAELENVIE---------------LPKFLKQEYLKVKEVY 1590 (1704)
T ss_pred HHHHHhhH---HHHHHHhhcchhHHHHHHh---hhhHHHHHhcCCCccC---------------CCcccchhhhhhHHHH
Confidence 11235556 6666666777777777666 4666777777774332 2335568999999988
Q ss_pred HhhcchHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-cccc-hhhhhcccCCCCCchhhhhhhhhhhhhHHHhhhhcc---
Q 000469 1371 QVAGNRDQLITLLLLLTEHVLNVILIHFQDSSIVS-ASSE-AMRTITYGAKSDSGQDISLLSGKLIPILERLELLGE--- 1445 (1472)
Q Consensus 1371 ~~~~~r~~~l~~~~~i~E~~L~ilw~Hl~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 1445 (1472)
. ++|++++.+|.|++|+|++++|+|++++.++. +.-+ ..+.+..-.++| .+||++++-++|-.+++
T Consensus 1591 ~--~n~~~l~~~~~f~~e~cl~~~w~hl~~~~l~~~~~~~~~~~~~i~~~~~d-------~~~k~~~~~~~L~~l~~~~I 1661 (1704)
T KOG1835|consen 1591 V--NNRDALKLLVHFLAELCLKILWIHLSLYLLASVDRLGEVSQQLISAEMED-------ETAKAIVSKDSLNLLKLLLI 1661 (1704)
T ss_pred H--hhHHHHHHHHHHHHHHHHHHHhccchhhcchhHHHHHHHHHHHHHhhchh-------hhhhhhccHHHHHHHHHHHH
Confidence 8 99999999999999999999999999999954 3222 333333333322 56666666666554433
Q ss_pred -----------------------cccCchHHHHHHhhhchhH
Q 000469 1446 -----------------------DKVGRDLKVFRRLVTSLKE 1464 (1472)
Q Consensus 1446 -----------------------~~~~~~~~~~~~~~~~~~~ 1464 (1472)
++||+.+|.|+||+|+.+.
T Consensus 1662 ~~f~e~l~~~~~d~k~~~sp~~~~~vg~~vk~i~~L~~~~~~ 1703 (1704)
T KOG1835|consen 1662 IDFDEDLLKLLEDAKGVYSPARRGFVGSLVKRIRRLLTLLRP 1703 (1704)
T ss_pred HhhhHHHHHHHhcccccCCHHHHhhHHHHHHHHHHHHHhcCC
Confidence 3799999999999998775
No 3
>KOG1835 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.91 E-value=2.7e-21 Score=249.09 Aligned_cols=964 Identities=14% Similarity=0.087 Sum_probs=543.4
Q ss_pred cCCCCCcCCCCCCCCC------CCcCCCccHHHHH--HHHHHHhcCCccccccccccc----------hHHhhhcccCCC
Q 000469 10 AGSHDFVHDSNLPSQQ------DTEIGPLPFVSLL--EFVSEIYQKEPELLSGNDVLW----------TFVVFAGEDHTN 71 (1472)
Q Consensus 10 ~~~~~~~~d~~~~~~~------~~~~~~~dlE~fl--l~ia~~Y~~~P~~~~~~~~fW----------gFi~wa~~~~~~ 71 (1472)
..-+|.|++..+.|.+ ++.+-.+.+++|. ..|-..|+.+|..-. ..+| +|.+|-+++-..
T Consensus 444 c~~p~~ep~~~llg~~~~~p~~lk~eL~~tlaaf~~a~siw~~lE~~~~~~~--v~v~s~~~q~~i~~e~~eiear~cky 521 (1704)
T KOG1835|consen 444 CFHPDWEPQVVLLGYQCNIPTYLKAELLKTLAAFSMAFSIWFFLESCQLLET--VRVWSSHQQISIIVEFNEIEARVCKY 521 (1704)
T ss_pred cCCCccccchhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccccee--eecCcccchhHHHHHHHHHHHHHhcC
Confidence 3446778999999994 6667788999999 777788888887652 3578 699998873344
Q ss_pred cchHHHHHHHHHHhcCChhhHHHHHHHhhcCCCCcccHHHHHHHHHHHHHHhhhccccCCC-----CCCC------CChh
Q 000469 72 FQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGA-----LLPD------FQEG 140 (1472)
Q Consensus 72 ~~~~~af~~ML~sLs~g~~~A~~~~~~L~~~~~~~vSW~~iF~~L~~Y~~~l~~~~~~~~~-----~~~~------l~~e 140 (1472)
|.+.+.+++|-+||.-|++.|.+.|+..-.. .+-+|..+++++++|+..|+.-.++..+ .+|+ ...+
T Consensus 522 ~lTrs~lyli~sslgag~~v~l~gy~ray~~--~sekW~~~~~clq~~~~~Ls~y~~q~~d~~~f~e~pgf~I~~~lq~~ 599 (1704)
T KOG1835|consen 522 NLTRSFLYLIFSSLGAGPSVALKGYDRAYRE--PSEKWQVIAQCLQSYTMLLSTYFPQLEDLLQFTERPGFKIDIPLQLE 599 (1704)
T ss_pred ccHHHHHHHHHHhhccCchhHHHHHHHHhhc--ccHhHHHHHHHHHHHHHHhcccchhhhhhhccccCCccccchhhhhh
Confidence 7778888888889999999999999776654 5899999999999999999974322111 1222 2244
Q ss_pred hHHHHHHHHHHHHHHHhcCcc-----hh-hcccCCChHHHHHhccCC---CCChhHHHHHHHHHH-HhhhcChhhHHHHH
Q 000469 141 DAKALVAYLNVLQKVMENGNS-----IE-RKNWFPDIEPLFKLLSYE---NVPPYLKGALRNAIA-ACIHVSLVMKDNIW 210 (1472)
Q Consensus 141 e~~~L~a~L~Li~~V~~~~~~-----~e-~~~w~~~i~~Lf~Ll~~~---~vp~~Lka~i~~tLa-al~~~s~~~a~~iW 210 (1472)
+.....++.-+.++|++-+.. ++ .+.|. ..+++..+.+. ++|..++++.++.|. +++++-...+..+|
T Consensus 600 s~liela~~im~s~v~~ld~~~~~q~~~~~~~~l--~~~~~~~L~~~~~~sv~~~l~~a~~~Ll~~~l~r~L~~~npr~w 677 (1704)
T KOG1835|consen 600 SGLIELALIIMESSVLRLDEYAAFQFKEDEKSSL--SKTLVLSLELAKQNSVPILLVAAMLDLLVSALARKLKGSNPRIW 677 (1704)
T ss_pred hhHHHHHHHHHHHHHHHHhhhccccccccccccH--HHHHHHHHHhccchhHHHHHHHHHHHHHhhhhhhhhcccchhhh
Confidence 555455554566677666542 11 22342 34555554432 389999999999999 88886677889999
Q ss_pred HHHh-hccCCCccccCCCCCCCcCCCccccHHHHHHHHhhhccCCcchHHHHHHHHHhhcCC--------------C---
Q 000469 211 RLLE-QYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEE--------------K--- 272 (1472)
Q Consensus 211 ~~Ld-~~~~~~~~~~~~~~~~~~~~~~~~gi~~el~eiE~~~~~Yp~t~aFl~LL~~Li~~~--------------~--- 272 (1472)
..++ -.++.-+..+.. ..+...+++..++-...|... .+++.+.++...- +
T Consensus 678 sadhv~ni~~y~~~g~l----------p~~~~~~ikil~~vs~~~~v~-~Lv~~l~~~~~~~el~~~fv~cl~~~~r~e~ 746 (1704)
T KOG1835|consen 678 SADHVLNILKYSSDGGL----------PMGAQAAIKILECVSCVYNVG-QLVKNLITLLMSRELPEGFVECLEEVTRLEE 746 (1704)
T ss_pred hhhHHHHHhhhhhcCCc----------hHhHHHHHHHHHHhcccccHH-HHHHHHHHHHHHHhhHHHHHHHHHHHhcchh
Confidence 9999 334333221111 123356666666666666655 6666666643321 0
Q ss_pred -CCCCCccc----cchhHHHHHhhhcC--------CCCccccCCchhHHHHHHHHHHHHHHHHhccCCCchhhhhhhhcc
Q 000469 273 -DVSDRGRR----FVGIFRFVYDHVFG--------PFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQS 339 (1472)
Q Consensus 273 -~~lg~g~R----~~py~~FV~~~VF~--------~~~~r~Y~~~~ekw~l~~~cL~~f~~~L~~y~~~~~dl~~~~~~~ 339 (1472)
..++.++| +++|++..++.... -..+|+...+.=+-.+.-+||.-+-..|..+.....+++-....
T Consensus 747 g~~le~~~~~lg~I~~l~~~~~~~~~p~v~~~llg~~~~r~v~~~~lqI~~~~sCl~~il~mLeki~~~~~~~~~~e~~- 825 (1704)
T KOG1835|consen 747 GLVLEFSPRSLGSIVQLFELNLNSLLPNVVLLLLGIDLKRAVMSNVLQIAIQYSCLNDILAMLEKIPRVSINEDLQEHN- 825 (1704)
T ss_pred HHHhhcchHHHHHHHHHHHhhccccCcchHHHhhhcccchhhhccCcchhhHHHHHHHHHHHHHhCCccccchhHHHHh-
Confidence 12445555 44444433322222 22344434444446666778777777776665431111111111
Q ss_pred CCcCCCCccccc---Cc--HHHHHHHhccChHHHHHHHHhhccchhhHhhhhccCccChHHHHHHHHHHHHHHHHHhhhh
Q 000469 340 STLTQSSPIQMQ---LP--VLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDL 414 (1472)
Q Consensus 340 ~~~~~~~~l~~y---~P--~~~vm~~~L~~~~v~~~L~~ii~~Gvd~l~~~~~~~~y~~~l~~~v~~aL~Il~~vL~~q~ 414 (1472)
+++++| +| ..-+|+ +|+.++.+..+++....|++.+.+.... +.+....+...+.|..+++++|.
T Consensus 826 ------~~l~~~l~~~p~tA~p~lr-yL~t~~~~fll~~L~~~gf~ql~~~~i~---~lnq~~~l~k~~ai~~~vlsl~~ 895 (1704)
T KOG1835|consen 826 ------YNLFTYLCACPDTAIPILR-YLSTEKAYFLLFHLVALGFDQLSEIMIS---SLNQVSWLPKLLAIALTVLSLQR 895 (1704)
T ss_pred ------hhhhhhccCCccchHHHHH-HHHHHHHHHHHHHHHHhCccccHHHHhc---cchHHHHHHHHHHHHhccchHHH
Confidence 556666 57 567888 9999999999999999999988443332 34566678888999999999988
Q ss_pred hhhhhhhccccch---h----------------hhhccCchHHHHHH-hhhcCCCchhhHHHHHHHHHHHhhhh------
Q 000469 415 LLSDFWRPLYQPV---D----------------VILSQDHNQIVALL-EYVRYDFLPQIQQCSIKIMSILSSRM------ 468 (1472)
Q Consensus 415 ~f~d~lrpl~~~~---d----------------~lLs~~~~~I~~L~-~Yv~~~~~p~ial~SikIL~~ls~r~------ 468 (1472)
-|.+ +.|.+... + ..+..+.+.|+|++ .++|..+ ..+...++.||.+.+.+-
T Consensus 896 ~~sh-l~~~~~~h~~~~~~l~d~~p~~g~~ag~~~i~~~n~~vahl~~l~~~~~~-~~~~~~ildiL~~~~~~~~~~~l~ 973 (1704)
T KOG1835|consen 896 HYSH-LFPDELVHGLYAAFLRDVYPTRGERAGLESIRSRNSAVAHLRALLVGSCD-QSILTNILDILAKLSDTENFMQLP 973 (1704)
T ss_pred HHHh-ccchhhhhhhHHHHhhhhcCcccccchhHHhhcCchHHHHHHHHHhcCch-HHHHHHHHHHHHHHhcCCCccccC
Confidence 4433 33422111 0 01224667899999 9999988 688888999999987221
Q ss_pred ----hhHHHHHhhcchhHHHHH-HHHHHhccccccccccccCCCChHHHHHHHHHhcCCC--CCChHHHhh-hCCccCCC
Q 000469 469 ----VGLVQLLLKYNAASSLVE-DYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISR--PAPNITHLL-LKFDLDTP 540 (1472)
Q Consensus 469 ----~~l~~~l~~~~es~~I~~-~Fv~~Le~~~~~~~~~e~~~~~~k~~IL~lLl~nL~~--~~PnlAH~L-LGFdv~~~ 540 (1472)
+.+.+++....+++++++ ++....+.. -...++..++++..+... -.-++.|+| +||.+.+-
T Consensus 974 ~fdr~~l~~i~~~~e~~a~~~~~t~~~~~l~~----------~L~~~~~ll~s~~s~~~~~~~~~~i~~Ll~l~~~in~v 1043 (1704)
T KOG1835|consen 974 NFDRNKLLQILIETESSARRIDVTRNSNKLTQ----------VLTLELYLLDSRPSKAQLKELYETISVLLGLGVVINRV 1043 (1704)
T ss_pred CcccchhhHHHHHhhccchhhhhhhhhHHHHH----------HHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 125666655555544444 222111111 011233444444433321 233677777 77777651
Q ss_pred CccccccCC------CCcchHHHHHHHHHhcCC---CC----Cch--hHHHHHHHHHHHhhcCCCCcHHHHHHHhccccc
Q 000469 541 IERTVLQPK------FHYSCLKIILEILEKVSK---PD----VNA--LLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQ 605 (1472)
Q Consensus 541 ~~~~~l~p~------~~~ScLhsIL~lL~~~~~---~~----~~p--~L~e~~~~LL~~Lc~~p~TS~~tLr~LR~~~~d 605 (1472)
...++. +-..++.+++..+..... ++ ..+ ...-++.++.-.||.+|.||+.++.+++..+ +
T Consensus 1044 ---~~~~~a~~~fl~~w~qlve~~~S~m~~~l~~~~~rs~ii~~im~~vl~~~l~i~~~lc~~p~~s~~~ls~ia~l~-~ 1119 (1704)
T KOG1835|consen 1044 ---LQFVMAKLHFLASWSQLVESLFSLMPRLLSSITPRSKIIYDIMRSVLIAALEISPFLCSAPLTSEVVLSLIAKLR-G 1119 (1704)
T ss_pred ---HHhhhhhHHHhcchhHHHHHHHHHhHHHhhhhcCCcchhhHhhHHHHHhhcCchHHHHhhhHHHHHHHHHHHhcc-c
Confidence 122221 224566677776666432 21 111 1257889999999999999999999999876 4
Q ss_pred -hHHHhhhhcC-CCCCCCCCC------c-hh----------HHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHH
Q 000469 606 -FFVKHLDAIG-VAPLPKRNS------N-QA----------LRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILA 666 (1472)
Q Consensus 606 -ff~~~L~~~~-i~~l~~~~~------~-~~----------~~~s~L~~rs~lL~~~AlEL~~~~~~~s~~~~~~~~ll~ 666 (1472)
|+.+.+..+| | ++.|.+ + .+ ...+++.+|...+++.+.++|.+...+ +.+....|+.
T Consensus 1120 ~f~~~ai~~d~~c--ft~~~i~~~~~~g~ss~l~~i~~~ll~~~S~~~~r~~~~~ll~s~i~y~~~a~--~~de~~~yv~ 1195 (1704)
T KOG1835|consen 1120 VFAVRAIVGDPTC--FTQVEISALSTGGHSSRLEKIVSALLRSLSSLVSRRTQMNLLGSLIHYAQIAG--RSDEPLEYVA 1195 (1704)
T ss_pred ceehhhhcCCcce--eeccccccCCCCCcchhHHHHHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHhc--CCCcHHHHHH
Confidence 7788777766 3 333332 2 11 113677799999999999999986433 3455668888
Q ss_pred hhcCCCccCCCCccccccccccccccccCcccccchhhhhhcccccCCCCChhhh-hhhhh-h-hcchhhHHHHHhcCCC
Q 000469 667 HLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMK-LSQIV-S-NMKYDLLAEEILGNPT 743 (1472)
Q Consensus 667 ~L~g~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~il~lLd~l~F~~~~~~~~-~p~~~-~-~~~~~~~~~~~~~~c~ 743 (1472)
.|+-+.... ..... ..+...+..|+.+|+........ .-+.+ . .....-....+...|-
T Consensus 1196 sLI~~~e~~-------~~~el-----------~q~~~~f~~L~~~n~~~I~~~~~~il~~~~~da~~g~~l~rml~l~~l 1257 (1704)
T KOG1835|consen 1196 SLIRNAEVP-------RKLEL-----------LQPEDVFSDLARLNILIIACLGENILDTFCYDALYGHELGRMLILYVL 1257 (1704)
T ss_pred HHHHhhhcc-------ccchh-----------cccchHHHHHHHhhhhhhccchhhhhhhhhccCccHHHHHHHHHHHHH
Confidence 888432111 00111 13345566666666655432221 00000 0 0000000011111221
Q ss_pred CCCCCCceeecCCCcccccHHHHHHHHH-------H-hhhhcc-ccccCCCchhhhhHHHHHH-HHHHHHHHHHhhHHHH
Q 000469 744 TSGKGGIYYYSERGDRLIDLSSFSDKLW-------K-KLNIVY-PQLSNFGSEAELNDVKEAI-QQLLRWGWKYNKNLEE 813 (1472)
Q Consensus 744 ~~~~g~~~~~~~~g~~l~di~~L~~~L~-------~-e~~~~~-~~~~~~~~~~~~~~~~~Ei-~~il~~~~~~N~~~~~ 813 (1472)
+ ...|+.+..+.+. + ....+. +..-+..+..+ + ...+. -+-...+..++++...
T Consensus 1258 ----~----------~i~~~~~~~~~m~~i~~gy~~~~l~Sl~~~s~~~~~s~l~-~-~l~~l~~e~~~afltria~~~~ 1321 (1704)
T KOG1835|consen 1258 ----D----------EISDFQKVQKLMLGILRGYLAEILASLSESSLESKLSPLE-D-QLRALVYEAKMAFLTRIAHIKR 1321 (1704)
T ss_pred ----h----------cchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccCch-H-HHHHHHHHHHHHHHHHHHHHhh
Confidence 1 1233322221111 1 111111 10000000101 1 11222 3444556666666555
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHhhhccccCCCCCC
Q 000469 814 QAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLN 893 (1472)
Q Consensus 814 ~~a~l~~L~aW~qLv~V~~s~~~~~~~~r~~~Il~~L~~il~ki~~~~~~~~~a~~Ls~l~l~Ll~~Lr~~~~~~~~~~~ 893 (1472)
-+.-+-++.||.++.+..|++|......+..+|.+..+..+|++.+. ...-+...++-+.+.+.+..-++.
T Consensus 1322 ga~~ll~~~A~~~l~~~~V~d~k~~~~~~s~fi~~~~~~~lP~i~d~-~r~~l~p~l~l~s~i~~si~p~~~-------- 1392 (1704)
T KOG1835|consen 1322 GALYLLILGAWGVLASCLVTDCKPEHSLVSMFITEVPGTFLPKILDR-FREILLPALSLTSVILTSIQPRDN-------- 1392 (1704)
T ss_pred hHHHHHHHHHHHHHhheeEeecCCCcchHHHHHHhcccccCCcHHHH-HHHHHHHHHHHHHHHHHhhccchh--------
Confidence 56667779999999999999998888888999999999999997652 223344444433332322222210
Q ss_pred CCcccchhhhhhhccCcchhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHhhhhccccCcc
Q 000469 894 SDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGED 973 (1472)
Q Consensus 894 ~~~~~~~d~~~~~~L~~~~~~~iL~~ll~~Il~~~ss~~lR~~lY~~l~~yLq~~~~~~~~~~~~~~~~~ll~~~~~~~~ 973 (1472)
....|+.. +. .+...+++.+++ ..+-++..++...|..- |+.-+.. . ++.++++
T Consensus 1393 ---kav~~v~~---f~-~~h~~l~kt~lr--~~~~d~v~l~~v~ll~g--lis~~~s------~---------de~d~~g 1446 (1704)
T KOG1835|consen 1393 ---KAVRDVGQ---FL-KTHRDLFKTLLR--KNSMDTVHLQEVALLDG--LISRVES------S---------DEIDSEG 1446 (1704)
T ss_pred ---HHHHHHHH---HH-HHHHHHHHHHHc--CCccchHHHHHHHHHHH--HHhhccc------h---------hhhhhhh
Confidence 01111110 00 111122222244 22235567777666554 2222211 0 0011110
Q ss_pred hhhhhhhhHHHHhHHHHHHHHHhhhhhHHHHHhccccCCCchhHHHHHHHHHHHHhccCcchHHHHHHhcCcH---HHHH
Q 000469 974 LDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFL---RSCL 1050 (1472)
Q Consensus 974 ~~~~~~~~~~~~l~~~~~~~i~~~~e~LidvIc~DA~~G~~~~r~~Al~lLd~Lv~ld~~~~il~~L~~~g~L---~~lv 1050 (1472)
...+..+- .-+++...-++|-.|...-.+.. |.-. ....++++.+.++- +.+.
T Consensus 1447 -----------~vq~l~lg-----~~~~f~~s~~~~~~~~q~d~i~~----d~~~----k~~~~~~f~~~i~~~l~~~~~ 1502 (1704)
T KOG1835|consen 1447 -----------RVQRLLLG-----SLKLFPKSRPAAGIGLQNDLILE----DLKS----KLLICNLFLKQIVDNLLKYCL 1502 (1704)
T ss_pred -----------HHHHHHHH-----HHHHhhccchhhhhccccCccch----hhHH----hHHHHHHHHHHHhHHHHHHHH
Confidence 01111111 12233333344444444443110 0000 01122222222211 1111
Q ss_pred HHh-----hhhh-h---hcccC-CcchhhHHHHHHHHHHHHHHHhcccCcchHHHHHh-CchHHHhhhcccccccCc
Q 000469 1051 MNV-----SNVS-Y---QDGKR-SLDTLQRACTLEAELALLLRISHKYGKSGAQVLFS-MGSLEHIASCKAVGLQGS 1116 (1472)
Q Consensus 1051 ~sl-----~~~~-L---~~~~~-~~~~l~~L~~yea~maLLlRiAq~~tr~GA~~Ll~-~~l~~~L~~~~~l~~~P~ 1116 (1472)
..+ ..++ + -.... ..+.++..+..++.+..++|... |+.++..|.+ ..++++++++.++...|.
T Consensus 1503 ~~l~s~s~~~~~al~llt~~~~~v~~~l~~~~~~~~~v~~~Ir~~~--~~~i~~ll~q~d~v~~i~a~l~~~~~~p~ 1577 (1704)
T KOG1835|consen 1503 LLLDSSSKLSTAALLLLTTVLSDVTDLLYKSNYKKATVLHFIRRYG--TREIGELLSQEDAVLEILAELENVIELPK 1577 (1704)
T ss_pred HHhhccchhHHHHHHHccccccchhhhhhHHHHHhhHHHHHHHhhc--chhHHHHHHhhhhHHHHHhcCCCccCCCc
Confidence 111 1111 1 11121 34788999999999999999999 8999999999 899999999999999985
No 4
>PF10487 Nup188: Nucleoporin subcomplex protein binding to Pom34; InterPro: IPR018864 This is one of the many peptides that make up the nucleoporin complex (NPC), and is found across eukaryotes []. The Nup188 subcomplex (Nic96p-Nup188p-Nup192p-Pom152p) is one of at least six that make up the NPC, and as such is symmetrically localised on both faces of the NPC at the nuclear end, being integrally bound to the C terminus of Pom34p [].
Probab=99.10 E-value=1.2e-08 Score=134.92 Aligned_cols=388 Identities=18% Similarity=0.278 Sum_probs=239.9
Q ss_pred ccHHHHHHHHHHHHHHhhhccccCCCCCCCCChhhHHHHHHHHHHHHHHHhcCcchhhc-----------ccCCChHHHH
Q 000469 107 IGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERK-----------NWFPDIEPLF 175 (1472)
Q Consensus 107 vSW~~iF~~L~~Y~~~l~~~~~~~~~~~~~l~~ee~~~L~a~L~Li~~V~~~~~~~e~~-----------~w~~~i~~Lf 175 (1472)
|.|.|=+..+.+--.-|.+-... ..++.....+.+...+.|++.|+..+...+.. .-..++++.|
T Consensus 513 V~w~~~ysgw~lLG~~Le~~~~~----~~~~d~~~~~~v~~ii~Ll~~l~~~~~~~~~~~~iL~~~S~~l~~~DIisvI~ 588 (931)
T PF10487_consen 513 VMWEYEYSGWALLGRWLENLLKS----YSELDSLQDERVAEIIDLLASLLSSDNSIEDSKEILEEASAYLDHSDIISVIF 588 (931)
T ss_pred EEEeecchHHHHHHHHHHHHHhc----ccccCcchHHHHHHHHHHHHHHHccCcchhHHHHHHHHHhhccccCcHHHHHH
Confidence 66666555555544444332111 01233344477888899999998544321111 1124677777
Q ss_pred HhccC--CCCChhHHHHHHHHHHHhhhcChhhHHHHHHHHhhccCCCccccCCCCCCCcCCCccccHHHHHHHHhhhccC
Q 000469 176 KLLSY--ENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQ 253 (1472)
Q Consensus 176 ~Ll~~--~~vp~~Lka~i~~tLaal~~~s~~~a~~iW~~Ld~~~~~~~~~~~~~~~~~~~~~~~~gi~~el~eiE~~~~~ 253 (1472)
.++-. ..-|..+..+|++.|+|+++. ....||..|-++.+....+ +.|- ....+-.+|...+.
T Consensus 589 ~ile~~L~~~~v~ll~scl~fL~aL~p~---~p~rVW~~L~rS~LL~~~g-~~G~-----------~s~ilgs~E~~~G~ 653 (931)
T PF10487_consen 589 DILERSLQSRNVELLTSCLRFLTALLPI---FPGRVWSYLSRSSLLGSDG-KGGL-----------ASVILGSIEMVSGR 653 (931)
T ss_pred HHHHHHcccCChHHHHHHHHHHHHHhcc---ChHHHHHHHhhCcCcccCC-ccch-----------HHHhhhhhhccCCc
Confidence 76432 346899999999999999984 3589999999888853321 1111 12234467888999
Q ss_pred CcchHHHHHHHHHhhcCCCC-CCCCccc----cchhHHHHHhhhcCCCCccccCCchhHHHHHHHHHHHHHHHHhccCCC
Q 000469 254 YPSTISFLNLLNALIAEEKD-VSDRGRR----FVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQ 328 (1472)
Q Consensus 254 Yp~t~aFl~LL~~Li~~~~~-~lg~g~R----~~py~~FV~~~VF~~~~~r~Y~~~~ekw~l~~~cL~~f~~~L~~y~~~ 328 (1472)
|+-|.++++|..+|+...-. ..|...+ +-+-+-|++-+||-.+.+|.|+++.+|.++...|+.+|++.|...-..
T Consensus 654 Y~ftls~lkL~~~Lv~~als~~~~~~~~~~~~vL~~~~~~l~eVfes~~~Wrf~~~~qR~eIg~~i~~~f~~IL~~~ygi 733 (931)
T PF10487_consen 654 YDFTLSLLKLFSALVDDALSSNSGVPSKTKSVVLPKIVFHLVEVFESFSTWRFNSPGQRFEIGRSILSIFSKILYYVYGI 733 (931)
T ss_pred chHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhhcCCceeCCChhhHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999974422 1121112 233466888899999999999999999999999999999998653211
Q ss_pred chhhhhhhhccCCcCCCCcccccCcHHHHHHHhccC----hHHHHHHHHhhccchhhHhhhhccCccChHHHHHHHHHHH
Q 000469 329 EEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSG----KAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLE 404 (1472)
Q Consensus 329 ~~dl~~~~~~~~~~~~~~~l~~y~P~~~vm~~~L~~----~~v~~~L~~ii~~Gvd~l~~~~~~~~y~~~l~~~v~~aL~ 404 (1472)
+ +.+.+......++. .++..|++.++.. ..+...|++++..|-..-..... +.++..+.+.+..+++
T Consensus 734 -~------~~~~~~~klt~vl~-~aa~~il~~fl~~~s~~~~~~~pll~~l~~~~~~~~~~~~-~~~~~~~~~~v~~sl~ 804 (931)
T PF10487_consen 734 -D------EDSSPDSKLTSVLA-PAAQYILDSFLSPSSSSQRAMNPLLSILTSGLNTPLSSLG-DRSGQLLSRLVQSSLS 804 (931)
T ss_pred -C------CCCCcchhhHHhhh-HHHHHHHHHHccCCCchhhcchHHHHHHhcccccchhhhh-hhHHHHHHHHHHHHHH
Confidence 1 01111100001100 2333555555532 22344455544332221100110 1124678889999999
Q ss_pred HHHHHHhhhhhhhhhhhccccchhhhhccCchHHHHHHhhhcCCCchhhHHHHHHHHHHHhh-h----hhhHHHHHhhcc
Q 000469 405 IVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSS-R----MVGLVQLLLKYN 479 (1472)
Q Consensus 405 Il~~vL~~q~~f~d~lrpl~~~~d~lLs~~~~~I~~L~~Yv~~~~~p~ial~SikIL~~ls~-r----~~~l~~~l~~~~ 479 (1472)
+.++++..... .+.+.| ..++..+..+.+.. +..|..++..+..+...+++|..+.+ + .|.|++-|.. .
T Consensus 805 ~~~~Ll~~r~~-~~~l~P--S~LE~~Lf~~s~~L--v~~~a~~~~~~~~~~~il~lL~sl~~~~~~~e~PSLL~~LG~-~ 878 (931)
T PF10487_consen 805 FATLLLRIRSY-LNLLPP--SALEKQLFKASPDL--VDLYASYPSLPRLRVPILELLTSLVSADWSSEPPSLLGHLGS-E 878 (931)
T ss_pred HHHHHHHHhhh-ccCCCc--hHHHHHHHhcchHH--HHHHhcccchhhHHHHHHHHHHHHhcCccCCCCCcHHHHcCC-h
Confidence 99998876443 343555 45666665444332 22344444445566667777776652 2 2568887754 3
Q ss_pred hhHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHhcCCCCCChHHHhhhCCc
Q 000469 480 AASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFD 536 (1472)
Q Consensus 480 es~~I~~~Fv~~Le~~~~~~~~~e~~~~~~k~~IL~lLl~nL~~~~PnlAH~LLGFd 536 (1472)
.|..+++.|+++|+.+.+ +..+|..|.+|+-..+...+-.+|.+||--+
T Consensus 879 ~s~~fl~~ll~~L~~p~~--------d~~l~~aIw~F~saiv~~~QqgLa~lfLTG~ 927 (931)
T PF10487_consen 879 HSKSFLDSLLSDLDNPFE--------DYNLKVAIWEFFSAIVEKQQQGLAILFLTGK 927 (931)
T ss_pred hHHHHHHHHHHHhCCccC--------CHHHHHHHHHHHHHHHccChhHHHHHHhcCC
Confidence 467788889999987654 3568999999999999655449999988543
No 5
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells. 26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding
Probab=84.98 E-value=15 Score=46.84 Aligned_cols=184 Identities=15% Similarity=0.129 Sum_probs=109.5
Q ss_pred HHHHhccccCCCchhHHHHHHHHHHHHhccC-cchHHHHHHhcCcHHHHHHHhhhhhhhcccCCcchhhHHHHHHHHHHH
Q 000469 1002 LDLFIKDATQGSEPGKTLSLYVLDALICIDH-EKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELAL 1080 (1472)
Q Consensus 1002 idvIc~DA~~G~~~~r~~Al~lLd~Lv~ld~-~~~il~~L~~~g~L~~lv~sl~~~~L~~~~~~~~~l~~L~~yea~maL 1080 (1472)
+..+.+-.....++.|. -+++.++.+.. +....+.....|++..++..+++.| .+ +=.+-+-+
T Consensus 162 ~~~L~~l~~~~~~~vR~---Rv~el~v~i~~~S~~~~~~~~~sgll~~ll~eL~~dD---------iL----vqlnalel 225 (503)
T PF10508_consen 162 LSKLKSLMSQSSDIVRC---RVYELLVEIASHSPEAAEAVVNSGLLDLLLKELDSDD---------IL----VQLNALEL 225 (503)
T ss_pred HHHHHHHHhccCHHHHH---HHHHHHHHHHhcCHHHHHHHHhccHHHHHHHHhcCcc---------HH----HHHHHHHH
Confidence 33344433333445554 35566777765 3677789999999999999998733 22 22466789
Q ss_pred HHHHhcccCcchHHHHHhCchHHHhhhc-ccccccCcccc--------cccCCCcc-CCchhhhhhHhHHHHHHHHHH--
Q 000469 1081 LLRISHKYGKSGAQVLFSMGSLEHIASC-KAVGLQGSLRR--------VATKPRRA-LGGDIDRQRMIVTPMLRLVFS-- 1148 (1472)
Q Consensus 1081 LlRiAq~~tr~GA~~Ll~~~l~~~L~~~-~~l~~~P~~~~--------~~~~~~~~-~p~~~~ry~~lL~PvlrL~~s-- 1148 (1472)
|..+|+ ++.|+++|.+.|+++.|.+. .--+.||.... ++...... -+...++|-.++--+++...+
T Consensus 226 l~~La~--~~~g~~yL~~~gi~~~L~~~l~~~~~dp~~~~~~l~g~~~f~g~la~~~~~~v~~~~p~~~~~l~~~~~s~d 303 (503)
T PF10508_consen 226 LSELAE--TPHGLQYLEQQGIFDKLSNLLQDSEEDPRLSSLLLPGRMKFFGNLARVSPQEVLELYPAFLERLFSMLESQD 303 (503)
T ss_pred HHHHHc--ChhHHHHHHhCCHHHHHHHHHhccccCCcccchhhhhHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999 89999999999999999874 23355562211 11111110 123445565555555544321
Q ss_pred ---HHHhhccCCccchhHHHHHHHHHHH-HHHHHHHHHHHhcccCCCChh----hHHHHHHHHHHHH
Q 000469 1149 ---LTSLVDTSDFFEVKNKVVREVMDFI-KGHQLLVDQVLQENISEADEL----TMEQINLVVGILS 1207 (1472)
Q Consensus 1149 ---vl~~~~s~g~~~~n~~~~~qv~~Fl-~~h~~lv~~vLr~~~~~~~~~----~Leel~ll~~ll~ 1207 (1472)
..++++|.|+..++ .+.+.+| .++...+..+|++-......+ -+.=++.++.|+.
T Consensus 304 ~~~~~~A~dtlg~igst----~~G~~~L~~~~~~~~~~~l~~~~~~~~~~~~~lk~r~l~al~~il~ 366 (503)
T PF10508_consen 304 PTIREVAFDTLGQIGST----VEGKQLLLQKQGPAMKHVLKAIGDAIKSGSTELKLRALHALASILT 366 (503)
T ss_pred hhHHHHHHHHHHHHhCC----HHHHHHHHhhcchHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHh
Confidence 12233333321122 4566666 777778888888777653333 3445666777764
No 6
>KOG4833 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.01 E-value=1.8 Score=50.82 Aligned_cols=68 Identities=22% Similarity=0.375 Sum_probs=55.0
Q ss_pred CCCccHHHHHHHHHHHhcCCccccccccccch---HHh---------hhcccCCCcchHHHHHHHHHHhcCChhhHHHHH
Q 000469 29 IGPLPFVSLLEFVSEIYQKEPELLSGNDVLWT---FVV---------FAGEDHTNFQTLVAFLKMLSTLASSQEGASKVY 96 (1472)
Q Consensus 29 ~~~~dlE~fll~ia~~Y~~~P~~~~~~~~fWg---Fi~---------wa~~~~~~~~~~~af~~ML~sLs~g~~~A~~~~ 96 (1472)
++..++|..+-+..++|++.-.++ ..||| |.. ..|+. |.+.++|..+|++|++|...|.++|
T Consensus 324 etdGnledIiDiaceVladeeSLc---clFWdrepfsdgpigciLddlcgeF---PfllaefiqLLraLseGkspAecVY 397 (573)
T KOG4833|consen 324 ETDGNLEDIIDIACEVLADEESLC---CLFWDREPFSDGPIGCILDDLCGEF---PFLLAEFIQLLRALSEGKSPAECVY 397 (573)
T ss_pred ccCCcHHHHHHHHHHHHcCcchhh---HHHhCCCCCCCCceeEEehhhhccc---chhhHHHHHHHHHHhcCCChHHHHH
Confidence 456788999999999999776777 89994 322 22333 6779999999999999999999999
Q ss_pred HHhhcC
Q 000469 97 ELLQGK 102 (1472)
Q Consensus 97 ~~L~~~ 102 (1472)
+||-..
T Consensus 398 nFLDKm 403 (573)
T KOG4833|consen 398 NFLDKM 403 (573)
T ss_pred HHHHHh
Confidence 999764
No 7
>PLN03205 ATR interacting protein; Provisional
Probab=47.86 E-value=2.3e+02 Score=34.34 Aligned_cols=52 Identities=19% Similarity=0.183 Sum_probs=37.2
Q ss_pred cchHHHHHHHHHhcCCC-----CCc-------hhHHHHHHHHHHHhhcCCCCcHHHHHHHhccc
Q 000469 552 YSCLKIILEILEKVSKP-----DVN-------ALLHEFGFQLLYELCLDPLTCGPTMDLLSNKK 603 (1472)
Q Consensus 552 ~ScLhsIL~lL~~~~~~-----~~~-------p~L~e~~~~LL~~Lc~~p~TS~~tLr~LR~~~ 603 (1472)
..-|--|+..|.+--+. ... ..|..-++=+|-+|.+||-.|.+||+.|-.+.
T Consensus 534 ~NFLmLILqvLvSemd~e~s~~~~~~e~~KaRtLLmREaLILLNRLvSn~~ySa~vL~vLT~sR 597 (652)
T PLN03205 534 SNFLMLILHLLVAEIDSESTEFHPKAEIFKARTLLMREILILLNRLVSGLSSSATILKELTKSR 597 (652)
T ss_pred ccHHHHHHHHHHHHhhhhhhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHhhh
Confidence 45666666666543221 111 24677788899999999999999999998765
No 8
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells. 26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding
Probab=22.87 E-value=3.3e+02 Score=34.85 Aligned_cols=145 Identities=17% Similarity=0.251 Sum_probs=93.8
Q ss_pred HHHHHHHHHHhcCCccccccccccc--hHHhhhcccC--CCcchHHHHHHHHHHhcCChhhHHHHHHHhhcCCCCcccHH
Q 000469 35 VSLLEFVSEIYQKEPELLSGNDVLW--TFVVFAGEDH--TNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWR 110 (1472)
Q Consensus 35 E~fll~ia~~Y~~~P~~~~~~~~fW--gFi~wa~~~~--~~~~~~~af~~ML~sLs~g~~~A~~~~~~L~~~~~~~vSW~ 110 (1472)
-|.+.++.++...-|+.. ..-| |++.-.-+.. .|+......+++|..||.++.++ +||...+
T Consensus 178 ~Rv~el~v~i~~~S~~~~---~~~~~sgll~~ll~eL~~dDiLvqlnalell~~La~~~~g~----~yL~~~g------- 243 (503)
T PF10508_consen 178 CRVYELLVEIASHSPEAA---EAVVNSGLLDLLLKELDSDDILVQLNALELLSELAETPHGL----QYLEQQG------- 243 (503)
T ss_pred HHHHHHHHHHHhcCHHHH---HHHHhccHHHHHHHHhcCccHHHHHHHHHHHHHHHcChhHH----HHHHhCC-------
Confidence 467888888888888876 3334 5555543221 34667889999999999988774 4554432
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCCCCChhhHHHHHHHHHHHHHHHhcCcchhhcccCC-ChHHHHHhccCCCCChhHHH
Q 000469 111 TLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFP-DIEPLFKLLSYENVPPYLKG 189 (1472)
Q Consensus 111 ~iF~~L~~Y~~~l~~~~~~~~~~~~~l~~ee~~~L~a~L~Li~~V~~~~~~~e~~~w~~-~i~~Lf~Ll~~~~vp~~Lka 189 (1472)
+|+.|......-..+. --....+.++++..+.++..++. +...-+| +++.+|.++. +-....+.
T Consensus 244 -i~~~L~~~l~~~~~dp-----------~~~~~~l~g~~~f~g~la~~~~~-~v~~~~p~~~~~l~~~~~--s~d~~~~~ 308 (503)
T PF10508_consen 244 -IFDKLSNLLQDSEEDP-----------RLSSLLLPGRMKFFGNLARVSPQ-EVLELYPAFLERLFSMLE--SQDPTIRE 308 (503)
T ss_pred -HHHHHHHHHhccccCC-----------cccchhhhhHHHHHHHHHhcChH-HHHHHHHHHHHHHHHHhC--CCChhHHH
Confidence 6777755554433321 01345567777888888886432 3322233 5667777765 47888999
Q ss_pred HHHHHHHHhhhcChhhHHHH
Q 000469 190 ALRNAIAACIHVSLVMKDNI 209 (1472)
Q Consensus 190 ~i~~tLaal~~~s~~~a~~i 209 (1472)
..++|++.++. +.+-+..+
T Consensus 309 ~A~dtlg~igs-t~~G~~~L 327 (503)
T PF10508_consen 309 VAFDTLGQIGS-TVEGKQLL 327 (503)
T ss_pred HHHHHHHHHhC-CHHHHHHH
Confidence 99999999998 55444443
No 9
>KOG0889 consensus Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning]
Probab=21.93 E-value=2.6e+02 Score=43.04 Aligned_cols=139 Identities=15% Similarity=0.172 Sum_probs=82.6
Q ss_pred HHHHHhhhcCCCCccccCCc-hhHHHHHHHHHHHHHHHHhccCCCc-hhh-hhhhhccCCcCCCCcccccCcHHHHHHHh
Q 000469 285 FRFVYDHVFGPFPQRAYADP-CEKWQLVVACLKHFHMILNMYDIQE-EDI-DNAVEQSSTLTQSSPIQMQLPVLELLKDF 361 (1472)
Q Consensus 285 ~~FV~~~VF~~~~~r~Y~~~-~ekw~l~~~cL~~f~~~L~~y~~~~-~dl-~~~~~~~~~~~~~~~l~~y~P~~~vm~~~ 361 (1472)
..+++..+|.....-+|.+- .|...+--.+|+++|+++..|.-.- -|+ .+.-.+.++-. +.+.+|.|.
T Consensus 651 Yf~LLraLFRsigGg~~d~ly~e~lplL~~lLe~ln~l~~~~~s~~mkdLfvELclTvPvRL--S~Llpylp~------- 721 (3550)
T KOG0889|consen 651 YFQLLRALFRSIGGGAFDSLYREVLPLLPNLLEILNHLLSSFHSQGMKDLFVELCLTLPVRL--SSLLPYLPL------- 721 (3550)
T ss_pred HHHHHHHHHHHhhccchHhHHHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHhhhHHH--HHhhhhhhh-------
Confidence 34566788888877765554 6667788999999999998888542 343 33333322211 345555442
Q ss_pred ccChHHHHHHHHhhccchhhHhhhhccCccChHHHHHHHHHHHHHHHHHh-hhhhhhhh-hhccccchhhhhccCchHHH
Q 000469 362 MSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFE-KDLLLSDF-WRPLYQPVDVILSQDHNQIV 439 (1472)
Q Consensus 362 L~~~~v~~~L~~ii~~Gvd~l~~~~~~~~y~~~l~~~v~~aL~Il~~vL~-~q~~f~d~-lrpl~~~~d~lLs~~~~~I~ 439 (1472)
|.++-+.. .+ |+ -+++-++|++++..++ +|+.|++- +-|+. -.+
T Consensus 722 LM~PLv~a-------------Lk-------gs--~~lvsQgLRtlelcvDnltPefL~~~mepv~------------~~l 767 (3550)
T KOG0889|consen 722 LMKPLVFA-------------LK-------GS--PELVSQGLRTLELCVDNLTPEFLDPIMEPVR------------DDL 767 (3550)
T ss_pred hhhHHHHH-------------hc-------CC--HHHHHHHHhHHHHHHhcCChHhhhHHHHHHH------------HHH
Confidence 11111110 12 22 2688899999999988 47766653 23321 122
Q ss_pred HHHhhhcCCC--chhhHHHHHHHHHHHhh
Q 000469 440 ALLEYVRYDF--LPQIQQCSIKIMSILSS 466 (1472)
Q Consensus 440 ~L~~Yv~~~~--~p~ial~SikIL~~ls~ 466 (1472)
-.+++.+... +..++..|+|||+++-+
T Consensus 768 mqaLw~~l~~~~~~s~s~~a~rILGKlgG 796 (3550)
T KOG0889|consen 768 MQALWSHLRPVPNYSYSHRALRILGKLGG 796 (3550)
T ss_pred HHHHHHhccCCCCchHHHHHHHHHHhhcC
Confidence 3344444422 35788899999999963
No 10
>PF11707 Npa1: Ribosome 60S biogenesis N-terminal; InterPro: IPR021714 Npa1p is required for ribosome biogenesis and operates in the same functional environment as Rsa3p and Dbp6p during early maturation of 60S ribosomal subunits []. The protein partners of Npa1p include eight putative helicases as well as the novel Npa2p factor. Npa1p can also associate with a subset of H/ACA and C/D small nucleolar RNPs (snoRNPs) involved in the chemical modification of residues in the vicinity of the peptidyl transferase centre []. The protein has also been referred to as Urb1, and this domain at the N-terminal is one of several conserved regions along the length.
Probab=18.55 E-value=1.1e+03 Score=28.40 Aligned_cols=27 Identities=7% Similarity=0.275 Sum_probs=20.2
Q ss_pred HHHHHhhhcCCCchhhHHHHHHHHHHHh
Q 000469 438 IVALLEYVRYDFLPQIQQCSIKIMSILS 465 (1472)
Q Consensus 438 I~~L~~Yv~~~~~p~ial~SikIL~~ls 465 (1472)
+-.|-++.+... +.++..++++|..+.
T Consensus 58 ~k~lyr~L~~~~-~~~~~~~LrLL~~iv 84 (330)
T PF11707_consen 58 LKLLYRSLSSSK-PSLTNPALRLLTAIV 84 (330)
T ss_pred HHHHHHHhCcCc-HHHHHHHHHHHHHHH
Confidence 445556666666 788889999999886
Done!