Query 000470
Match_columns 1472
No_of_seqs 744 out of 5245
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 09:54:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000470.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000470hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1240 Protein kinase contain 100.0 2E-211 4E-216 1892.6 70.4 1327 1-1472 78-1431(1431)
2 PLN00181 protein SPA1-RELATED; 100.0 1.8E-42 3.9E-47 457.6 56.4 308 1053-1472 478-791 (793)
3 KOG0615 Serine/threonine prote 100.0 1.8E-39 3.9E-44 362.3 10.9 196 1-211 233-437 (475)
4 KOG0575 Polo-like serine/threo 100.0 5.4E-37 1.2E-41 359.9 17.1 194 1-211 75-269 (592)
5 KOG0271 Notchless-like WD40 re 100.0 5.1E-35 1.1E-39 319.6 25.4 341 1046-1472 103-479 (480)
6 KOG0581 Mitogen-activated prot 100.0 3.9E-36 8.4E-41 335.1 16.1 192 1-211 134-335 (364)
7 KOG0592 3-phosphoinositide-dep 100.0 3.4E-35 7.4E-40 338.4 17.3 200 2-211 132-338 (604)
8 KOG0588 Serine/threonine prote 100.0 2.4E-35 5.2E-40 345.5 15.3 194 1-211 69-263 (786)
9 KOG0599 Phosphorylase kinase g 100.0 2.2E-35 4.8E-40 311.5 12.5 199 1-211 80-283 (411)
10 KOG0272 U4/U6 small nuclear ri 100.0 1.3E-33 2.7E-38 313.5 23.1 283 1055-1472 172-458 (459)
11 KOG0598 Ribosomal protein S6 k 100.0 2.7E-34 5.8E-39 320.5 15.8 194 1-211 82-281 (357)
12 KOG0661 MAPK related serine/th 100.0 2.1E-34 4.5E-39 327.1 14.3 194 1-211 65-291 (538)
13 KOG0593 Predicted protein kina 100.0 5.9E-35 1.3E-39 313.6 8.1 203 1-226 58-292 (396)
14 KOG0591 NIMA (never in mitosis 100.0 1E-34 2.2E-39 308.8 8.1 198 1-215 75-285 (375)
15 KOG0595 Serine/threonine-prote 100.0 1E-33 2.2E-38 317.6 16.0 193 1-211 66-268 (429)
16 KOG0583 Serine/threonine prote 100.0 2.7E-33 5.8E-38 333.1 17.6 194 3-211 79-275 (370)
17 KOG0286 G-protein beta subunit 100.0 5.2E-31 1.1E-35 280.5 31.5 294 1051-1472 48-343 (343)
18 KOG0611 Predicted serine/threo 100.0 6.4E-33 1.4E-37 306.0 14.2 195 1-213 110-305 (668)
19 KOG0616 cAMP-dependent protein 100.0 8.9E-33 1.9E-37 297.0 13.7 191 1-211 101-297 (355)
20 KOG0033 Ca2+/calmodulin-depend 100.0 7.2E-33 1.6E-37 288.8 12.4 193 1-211 67-267 (355)
21 KOG0600 Cdc2-related protein k 100.0 2E-32 4.3E-37 313.3 17.0 196 1-211 173-400 (560)
22 KOG0660 Mitogen-activated prot 100.0 5E-33 1.1E-37 309.0 11.7 197 1-211 78-310 (359)
23 KOG0597 Serine-threonine prote 100.0 7.7E-33 1.7E-37 317.4 13.2 194 1-211 58-251 (808)
24 KOG0582 Ste20-like serine/thre 100.0 4.9E-32 1.1E-36 305.6 17.3 200 1-211 81-293 (516)
25 KOG0659 Cdk activating kinase 100.0 3.6E-32 7.8E-37 288.4 14.6 195 1-211 58-281 (318)
26 KOG0198 MEKK and related serin 100.0 3.8E-32 8.2E-37 310.2 14.0 198 1-211 71-276 (313)
27 KOG0272 U4/U6 small nuclear ri 100.0 1.5E-31 3.2E-36 297.2 18.1 258 1039-1378 197-458 (459)
28 KOG0605 NDR and related serine 100.0 1.1E-31 2.3E-36 310.5 15.7 199 2-211 199-445 (550)
29 KOG4717 Serine/threonine prote 100.0 1.3E-31 2.8E-36 303.1 15.0 193 2-211 75-270 (864)
30 KOG0578 p21-activated serine/t 100.0 1.2E-31 2.6E-36 312.8 13.6 193 1-211 327-523 (550)
31 KOG0604 MAP kinase-activated p 100.0 1.1E-31 2.4E-36 287.9 12.3 192 2-211 113-322 (400)
32 KOG0663 Protein kinase PITSLRE 100.0 2.9E-31 6.4E-36 289.0 15.4 195 1-211 132-361 (419)
33 KOG0658 Glycogen synthase kina 100.0 7.3E-32 1.6E-36 300.3 10.0 194 1-211 74-306 (364)
34 KOG0295 WD40 repeat-containing 100.0 1.2E-29 2.7E-34 277.2 25.1 307 1041-1472 91-404 (406)
35 KOG0285 Pleiotropic regulator 100.0 1.8E-29 3.8E-34 274.2 25.7 305 1040-1472 133-437 (460)
36 KOG0279 G protein beta subunit 100.0 2.2E-29 4.7E-34 267.0 25.7 262 1046-1380 51-313 (315)
37 KOG0594 Protein kinase PCTAIRE 100.0 1.5E-30 3.2E-35 291.2 16.9 195 1-211 67-302 (323)
38 KOG0585 Ca2+/calmodulin-depend 100.0 1E-30 2.3E-35 296.3 13.2 205 1-213 165-374 (576)
39 KOG0192 Tyrosine kinase specif 100.0 4.8E-30 1E-34 302.2 18.9 197 1-212 96-300 (362)
40 cd05571 STKc_PKB Catalytic dom 100.0 2.2E-30 4.9E-35 307.9 16.3 194 1-211 52-251 (323)
41 KOG0580 Serine/threonine prote 100.0 1.1E-30 2.5E-35 273.5 12.0 194 1-213 79-275 (281)
42 KOG0596 Dual specificity; seri 100.0 4E-30 8.7E-35 296.0 16.4 204 2-211 418-627 (677)
43 cd05585 STKc_YPK1_like Catalyt 100.0 7.8E-30 1.7E-34 301.7 16.9 194 1-211 50-247 (312)
44 KOG0694 Serine/threonine prote 100.0 5E-30 1.1E-34 304.4 14.8 192 2-211 427-624 (694)
45 cd05612 STKc_PRKX_like Catalyt 100.0 5.8E-30 1.3E-34 299.7 15.2 191 1-211 58-254 (291)
46 KOG0589 Serine/threonine prote 100.0 2.9E-30 6.3E-35 301.1 11.6 194 1-211 60-258 (426)
47 KOG4721 Serine/threonine prote 100.0 3.4E-30 7.4E-35 294.9 11.8 210 1-229 169-381 (904)
48 cd05590 STKc_nPKC_eta Catalyti 100.0 1.4E-29 3.1E-34 300.5 17.7 193 2-211 54-253 (320)
49 PTZ00263 protein kinase A cata 100.0 8.7E-30 1.9E-34 303.5 15.9 191 1-211 75-271 (329)
50 PTZ00426 cAMP-dependent protei 100.0 9.4E-30 2E-34 304.2 15.9 191 1-211 88-284 (340)
51 cd05575 STKc_SGK Catalytic dom 100.0 1.2E-29 2.5E-34 301.7 16.6 194 1-211 53-251 (323)
52 cd05593 STKc_PKB_gamma Catalyt 100.0 1.8E-29 4E-34 300.6 17.8 194 1-211 52-251 (328)
53 cd05584 STKc_p70S6K Catalytic 100.0 2.6E-29 5.6E-34 298.7 19.0 194 1-211 57-256 (323)
54 cd05595 STKc_PKB_beta Catalyti 100.0 2.2E-29 4.8E-34 299.3 18.2 194 1-211 52-251 (323)
55 cd05620 STKc_nPKC_delta Cataly 100.0 2.7E-29 5.8E-34 297.6 18.0 193 2-211 54-248 (316)
56 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.3E-29 7.2E-34 292.8 17.9 195 1-211 60-285 (288)
57 KOG0315 G-protein beta subunit 100.0 1.4E-27 3E-32 248.9 27.1 276 1070-1472 10-286 (311)
58 KOG0610 Putative serine/threon 100.0 4.7E-29 1E-33 279.8 17.2 217 1-234 134-408 (459)
59 cd05591 STKc_nPKC_epsilon Cata 100.0 3.6E-29 7.8E-34 297.3 17.4 193 2-211 54-254 (321)
60 KOG0607 MAP kinase-interacting 100.0 8.5E-30 1.8E-34 274.9 10.7 205 2-211 134-361 (463)
61 cd05592 STKc_nPKC_theta_delta 100.0 5.5E-29 1.2E-33 295.0 18.0 193 2-211 54-248 (316)
62 KOG0279 G protein beta subunit 100.0 3.6E-27 7.9E-32 250.2 29.6 303 1049-1472 6-311 (315)
63 cd05594 STKc_PKB_alpha Catalyt 100.0 2.4E-29 5.1E-34 299.4 14.8 194 1-211 52-252 (325)
64 KOG4279 Serine/threonine prote 100.0 4.8E-30 1E-34 298.6 8.5 196 1-211 629-832 (1226)
65 KOG0296 Angio-associated migra 100.0 5.9E-27 1.3E-31 256.6 31.9 329 1050-1472 56-396 (399)
66 cd05619 STKc_nPKC_theta Cataly 100.0 5.6E-29 1.2E-33 294.8 17.0 194 1-211 53-248 (316)
67 PTZ00267 NIMA-related protein 100.0 6.1E-29 1.3E-33 310.5 17.8 193 1-211 122-323 (478)
68 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.1E-28 2.4E-33 290.7 19.0 195 1-211 60-288 (303)
69 KOG0284 Polyadenylation factor 100.0 1.7E-28 3.7E-33 271.4 18.8 283 1056-1472 94-378 (464)
70 cd05602 STKc_SGK1 Catalytic do 100.0 4E-29 8.7E-34 297.4 15.1 192 1-209 53-245 (325)
71 KOG0032 Ca2+/calmodulin-depend 100.0 1.1E-28 2.4E-33 293.2 18.5 190 3-211 95-293 (382)
72 cd05589 STKc_PKN Catalytic dom 100.0 9.8E-29 2.1E-33 294.0 17.9 193 1-211 59-257 (324)
73 KOG0586 Serine/threonine prote 100.0 1.5E-29 3.3E-34 297.6 10.7 196 1-213 112-308 (596)
74 KOG4645 MAPKKK (MAP kinase kin 100.0 4.1E-30 9E-35 320.3 6.0 201 1-211 1291-1494(1509)
75 KOG0201 Serine/threonine prote 100.0 4.8E-30 1E-34 290.1 5.9 194 1-211 68-263 (467)
76 PHA03212 serine/threonine kina 100.0 1.3E-28 2.8E-33 299.5 18.9 195 1-211 140-376 (391)
77 cd05618 STKc_aPKC_iota Catalyt 100.0 1.2E-28 2.5E-33 293.8 18.1 193 2-211 54-262 (329)
78 KOG0293 WD40 repeat-containing 100.0 7.1E-28 1.5E-32 266.0 22.5 292 1052-1472 218-511 (519)
79 cd07859 STKc_TDY_MAPK_plant Ca 100.0 8.1E-29 1.8E-33 296.4 16.6 199 1-211 56-290 (338)
80 cd00200 WD40 WD40 domain, foun 100.0 1.2E-26 2.6E-31 266.0 33.8 287 1051-1472 2-289 (289)
81 cd05588 STKc_aPKC Catalytic do 100.0 1.2E-28 2.5E-33 293.8 17.7 193 2-211 54-262 (329)
82 cd05582 STKc_RSK_N N-terminal 100.0 4.7E-29 1E-33 295.9 14.1 194 1-211 55-254 (318)
83 cd05603 STKc_SGK2 Catalytic do 100.0 7.5E-29 1.6E-33 294.6 15.5 194 1-211 53-251 (321)
84 cd05570 STKc_PKC Catalytic dom 100.0 1.4E-28 3E-33 291.8 17.6 193 2-211 54-252 (318)
85 cd05614 STKc_MSK2_N N-terminal 100.0 1.1E-28 2.4E-33 294.5 16.8 195 2-211 63-267 (332)
86 cd05604 STKc_SGK3 Catalytic do 100.0 9.3E-29 2E-33 294.3 15.9 194 1-211 53-251 (325)
87 KOG0265 U5 snRNP-specific prot 100.0 7.1E-27 1.5E-31 250.2 28.1 290 1051-1470 40-334 (338)
88 KOG0271 Notchless-like WD40 re 100.0 9.2E-28 2E-32 263.0 21.7 293 1097-1472 106-437 (480)
89 KOG0282 mRNA splicing factor [ 100.0 2.7E-28 5.8E-33 275.7 17.8 295 1048-1472 204-503 (503)
90 KOG0667 Dual-specificity tyros 100.0 5.8E-29 1.3E-33 296.3 13.1 188 4-211 248-502 (586)
91 KOG0315 G-protein beta subunit 100.0 1.1E-26 2.4E-31 242.3 28.2 270 1040-1390 21-298 (311)
92 cd07862 STKc_CDK6 Catalytic do 100.0 1.6E-28 3.4E-33 287.2 16.1 193 1-211 61-287 (290)
93 cd05631 STKc_GRK4 Catalytic do 100.0 2.9E-28 6.3E-33 284.4 17.8 193 1-211 57-261 (285)
94 cd05586 STKc_Sck1_like Catalyt 100.0 1.2E-28 2.6E-33 294.0 14.1 194 2-211 54-253 (330)
95 cd07848 STKc_CDKL5 Catalytic d 100.0 2.1E-28 4.6E-33 285.7 15.8 195 1-211 57-284 (287)
96 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.8E-28 6.1E-33 291.2 16.9 191 1-211 58-257 (333)
97 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.6E-28 7.9E-33 289.4 17.7 193 2-211 54-260 (327)
98 PHA02988 hypothetical protein; 100.0 4.7E-28 1E-32 282.3 18.2 196 1-214 75-278 (283)
99 cd05587 STKc_cPKC Catalytic do 100.0 3.4E-28 7.4E-33 289.3 17.2 192 3-211 60-257 (324)
100 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.4E-28 3.1E-33 295.8 14.0 200 1-211 58-285 (350)
101 cd05616 STKc_cPKC_beta Catalyt 100.0 2.8E-28 6.1E-33 289.9 16.3 193 2-211 59-257 (323)
102 cd05599 STKc_NDR_like Catalyti 100.0 3.9E-28 8.4E-33 293.8 17.5 200 1-211 58-296 (364)
103 PHA03207 serine/threonine kina 100.0 5.5E-28 1.2E-32 295.0 18.5 203 1-218 143-382 (392)
104 KOG0266 WD40 repeat-containing 100.0 1.8E-26 4E-31 284.9 31.9 297 1048-1472 148-452 (456)
105 KOG0666 Cyclin C-dependent kin 100.0 1.2E-28 2.6E-33 265.4 10.8 198 1-211 84-337 (438)
106 cd05596 STKc_ROCK Catalytic do 100.0 6E-28 1.3E-32 292.2 17.9 198 1-211 100-304 (370)
107 cd06649 PKc_MEK2 Catalytic dom 100.0 1.1E-27 2.4E-32 285.8 19.7 192 1-211 60-301 (331)
108 cd05628 STKc_NDR1 Catalytic do 100.0 1.3E-27 2.8E-32 289.0 20.4 200 1-211 58-293 (363)
109 cd07868 STKc_CDK8 Catalytic do 100.0 7.8E-28 1.7E-32 285.3 18.1 198 1-211 55-314 (317)
110 cd05102 PTKc_VEGFR3 Catalytic 100.0 8.8E-28 1.9E-32 287.6 18.7 196 2-214 69-333 (338)
111 cd05608 STKc_GRK1 Catalytic do 100.0 1.2E-27 2.5E-32 278.6 19.2 194 1-211 50-257 (280)
112 KOG1989 ARK protein kinase fam 100.0 1.1E-28 2.4E-33 302.9 11.0 203 2-213 93-309 (738)
113 KOG0603 Ribosomal protein S6 k 100.0 4.1E-28 8.8E-33 287.3 14.1 187 2-211 374-563 (612)
114 cd05615 STKc_cPKC_alpha Cataly 100.0 1.2E-27 2.5E-32 284.5 18.2 193 2-211 59-257 (323)
115 cd07874 STKc_JNK3 Catalytic do 100.0 8.7E-28 1.9E-32 289.6 17.1 191 1-211 73-311 (355)
116 cd05048 PTKc_Ror Catalytic Dom 99.9 1.6E-27 3.5E-32 277.5 18.4 199 1-214 65-282 (283)
117 cd05625 STKc_LATS1 Catalytic d 99.9 1.1E-27 2.4E-32 291.6 17.7 200 1-211 58-305 (382)
118 PTZ00036 glycogen synthase kin 99.9 1.8E-27 3.9E-32 294.0 19.6 194 1-211 116-351 (440)
119 cd07872 STKc_PCTAIRE2 Catalyti 99.9 1.1E-27 2.3E-32 283.1 16.8 195 1-211 61-286 (309)
120 cd05621 STKc_ROCK2 Catalytic d 99.9 1.3E-27 2.7E-32 289.1 17.6 198 1-211 100-304 (370)
121 cd05629 STKc_NDR_like_fungal C 99.9 1.2E-27 2.7E-32 290.6 17.6 200 1-211 58-305 (377)
122 cd07863 STKc_CDK4 Catalytic do 99.9 1.1E-27 2.4E-32 279.6 16.5 193 1-211 59-285 (288)
123 KOG0197 Tyrosine kinases [Sign 99.9 1.2E-27 2.6E-32 279.6 16.5 192 1-212 258-458 (468)
124 PHA03211 serine/threonine kina 99.9 2.3E-27 5.1E-32 291.9 19.4 196 1-211 217-455 (461)
125 cd05598 STKc_LATS Catalytic do 99.9 8.6E-28 1.9E-32 292.0 15.4 200 1-211 58-301 (376)
126 KOG0281 Beta-TrCP (transducin 99.9 2.5E-27 5.4E-32 256.0 16.9 293 1041-1472 177-475 (499)
127 cd05094 PTKc_TrkC Catalytic do 99.9 3.5E-27 7.6E-32 276.1 19.8 202 1-217 64-284 (291)
128 KOG0579 Ste20-like serine/thre 99.9 5.4E-28 1.2E-32 278.7 12.4 199 1-211 86-289 (1187)
129 cd06625 STKc_MEKK3_like Cataly 99.9 4.1E-27 8.9E-32 270.8 19.9 197 1-211 61-260 (263)
130 cd07875 STKc_JNK1 Catalytic do 99.9 1.9E-27 4.2E-32 287.6 17.9 191 1-211 80-318 (364)
131 cd07876 STKc_JNK2 Catalytic do 99.9 1.6E-27 3.4E-32 287.9 17.1 191 1-211 77-315 (359)
132 cd05626 STKc_LATS2 Catalytic d 99.9 2.3E-27 5.1E-32 288.5 18.3 201 1-211 58-305 (381)
133 PLN00034 mitogen-activated pro 99.9 2.5E-27 5.4E-32 285.3 18.3 195 1-211 129-328 (353)
134 cd05601 STKc_CRIK Catalytic do 99.9 1.3E-27 2.8E-32 285.1 15.6 200 1-211 58-263 (330)
135 cd07853 STKc_NLK Catalytic dom 99.9 1.2E-27 2.6E-32 290.2 15.2 196 1-211 56-288 (372)
136 KOG0273 Beta-transducin family 99.9 1.1E-25 2.4E-30 253.3 29.4 283 1059-1471 236-520 (524)
137 cd08227 PK_STRAD_alpha Pseudok 99.9 3E-27 6.5E-32 281.6 18.2 203 1-211 56-307 (327)
138 PHA03209 serine/threonine kina 99.9 2.5E-27 5.4E-32 285.6 17.4 193 1-211 114-351 (357)
139 cd05607 STKc_GRK7 Catalytic do 99.9 5.4E-27 1.2E-31 272.6 19.4 193 1-211 50-250 (277)
140 KOG0577 Serine/threonine prote 99.9 3.3E-28 7.2E-33 279.7 8.9 193 1-211 83-278 (948)
141 KOG2345 Serine/threonine prote 99.9 3.7E-28 8E-33 255.6 8.4 204 1-213 75-298 (302)
142 cd07867 STKc_CDC2L6 Catalytic 99.9 3.5E-27 7.5E-32 279.6 17.6 198 1-211 55-314 (317)
143 cd05622 STKc_ROCK1 Catalytic d 99.9 3.5E-27 7.5E-32 285.6 17.9 198 1-211 100-304 (371)
144 cd06650 PKc_MEK1 Catalytic dom 99.9 5.8E-27 1.3E-31 279.7 19.6 192 1-211 60-299 (333)
145 cd07873 STKc_PCTAIRE1 Catalyti 99.9 4.2E-27 9.2E-32 276.9 17.3 195 1-211 61-286 (301)
146 PTZ00284 protein kinase; Provi 99.9 2.1E-27 4.5E-32 296.6 15.4 190 2-211 189-438 (467)
147 cd05093 PTKc_TrkB Catalytic do 99.9 7.3E-27 1.6E-31 273.0 18.9 195 1-213 64-277 (288)
148 cd05627 STKc_NDR2 Catalytic do 99.9 3.7E-27 8.1E-32 284.6 16.5 200 1-211 58-293 (360)
149 cd07861 STKc_CDK1_euk Catalyti 99.9 6.7E-27 1.4E-31 272.6 18.1 195 1-211 56-282 (285)
150 KOG0669 Cyclin T-dependent kin 99.9 1.3E-27 2.9E-32 250.4 10.6 199 1-211 73-315 (376)
151 cd05096 PTKc_DDR1 Catalytic do 99.9 9.9E-27 2.1E-31 274.1 19.4 197 1-212 76-302 (304)
152 cd05090 PTKc_Ror1 Catalytic do 99.9 1.1E-26 2.4E-31 270.7 18.7 198 1-213 64-281 (283)
153 cd05633 STKc_GRK3 Catalytic do 99.9 9.2E-27 2E-31 270.9 17.9 192 2-211 55-255 (279)
154 KOG0291 WD40-repeat-containing 99.9 4.5E-25 9.7E-30 259.7 31.5 346 1050-1472 137-506 (893)
155 KOG0263 Transcription initiati 99.9 1.6E-26 3.5E-31 276.0 19.6 211 1049-1295 442-652 (707)
156 KOG0662 Cyclin-dependent kinas 99.9 3.6E-27 7.8E-32 235.2 11.8 201 1-224 58-289 (292)
157 cd05605 STKc_GRK4_like Catalyt 99.9 1E-26 2.3E-31 271.3 17.8 193 1-211 57-261 (285)
158 cd05106 PTKc_CSF-1R Catalytic 99.9 9.9E-27 2.2E-31 281.9 18.2 196 2-214 100-371 (374)
159 KOG0690 Serine/threonine prote 99.9 8.3E-28 1.8E-32 259.5 7.7 194 1-211 225-424 (516)
160 cd06628 STKc_MAPKKK_Byr2_like 99.9 1.7E-26 3.6E-31 266.5 19.0 200 1-211 63-264 (267)
161 cd00192 PTKc Catalytic domain 99.9 1.3E-26 2.9E-31 265.7 18.0 197 1-212 53-261 (262)
162 PTZ00283 serine/threonine prot 99.9 7.8E-27 1.7E-31 291.8 17.2 196 1-211 88-297 (496)
163 KOG0284 Polyadenylation factor 99.9 1.2E-26 2.5E-31 257.0 16.4 264 1040-1384 119-384 (464)
164 cd05084 PTKc_Fes Catalytic dom 99.9 1.6E-26 3.5E-31 264.4 18.4 198 1-213 50-251 (252)
165 cd05089 PTKc_Tie1 Catalytic do 99.9 1.3E-26 2.8E-31 272.2 18.1 194 2-213 61-273 (297)
166 KOG0983 Mitogen-activated prot 99.9 2.4E-27 5.1E-32 251.4 10.3 194 3-211 150-349 (391)
167 cd08529 STKc_FA2-like Catalyti 99.9 1.3E-26 2.8E-31 265.4 17.4 194 1-211 56-253 (256)
168 cd06646 STKc_MAP4K5 Catalytic 99.9 1.6E-26 3.5E-31 266.7 18.2 198 1-212 63-266 (267)
169 cd05606 STKc_beta_ARK Catalyti 99.9 1.6E-26 3.5E-31 268.7 18.2 192 2-211 55-255 (278)
170 cd06645 STKc_MAP4K3 Catalytic 99.9 1.5E-26 3.3E-31 267.0 17.7 197 1-211 63-265 (267)
171 cd05092 PTKc_TrkA Catalytic do 99.9 2.3E-26 5E-31 267.7 19.2 198 1-213 64-279 (280)
172 cd05064 PTKc_EphR_A10 Catalyti 99.9 1.9E-26 4E-31 266.3 18.2 197 1-213 63-263 (266)
173 cd05104 PTKc_Kit Catalytic dom 99.9 1.6E-26 3.6E-31 280.2 18.6 196 2-214 97-373 (375)
174 cd05091 PTKc_Ror2 Catalytic do 99.9 1.8E-26 4E-31 268.8 18.3 198 1-213 65-281 (283)
175 cd05580 STKc_PKA Catalytic dom 99.9 1.7E-26 3.7E-31 270.2 17.9 191 1-211 58-254 (290)
176 cd05049 PTKc_Trk Catalytic dom 99.9 2.7E-26 5.8E-31 266.8 19.3 198 1-213 65-279 (280)
177 cd05062 PTKc_IGF-1R Catalytic 99.9 2E-26 4.3E-31 267.7 18.2 198 1-213 66-276 (277)
178 KOG0584 Serine/threonine prote 99.9 3.9E-27 8.5E-32 277.4 12.3 190 1-211 98-296 (632)
179 cd05052 PTKc_Abl Catalytic dom 99.9 2.3E-26 5E-31 265.0 18.6 198 1-214 59-261 (263)
180 KOG0319 WD40-repeat-containing 99.9 1.8E-25 4E-30 263.5 26.2 298 1046-1472 311-617 (775)
181 cd05116 PTKc_Syk Catalytic dom 99.9 2.6E-26 5.7E-31 263.5 18.9 196 1-213 53-253 (257)
182 cd07839 STKc_CDK5 Catalytic do 99.9 6.1E-27 1.3E-31 272.9 13.8 195 1-211 56-281 (284)
183 cd05053 PTKc_FGFR Catalytic do 99.9 1.6E-26 3.5E-31 270.7 17.4 198 2-214 74-290 (293)
184 KOG0614 cGMP-dependent protein 99.9 1.5E-27 3.2E-32 271.0 7.9 204 1-229 477-688 (732)
185 cd05597 STKc_DMPK_like Catalyt 99.9 1.8E-26 3.9E-31 275.3 17.6 200 1-211 58-266 (331)
186 PHA03390 pk1 serine/threonine- 99.9 3.1E-26 6.7E-31 264.7 18.9 188 2-211 67-262 (267)
187 KOG0645 WD40 repeat protein [G 99.9 7.3E-25 1.6E-29 231.8 27.2 296 1050-1472 6-309 (312)
188 cd05572 STKc_cGK_PKG Catalytic 99.9 1.9E-26 4.1E-31 265.3 16.7 193 1-211 50-252 (262)
189 cd05061 PTKc_InsR Catalytic do 99.9 3.2E-26 7E-31 267.6 18.7 204 1-219 66-282 (288)
190 cd05108 PTKc_EGFR Catalytic do 99.9 2.8E-26 6.1E-31 271.9 18.4 198 1-216 66-269 (316)
191 cd05623 STKc_MRCK_alpha Cataly 99.9 1.9E-26 4.1E-31 275.3 16.6 200 1-211 58-266 (332)
192 cd05036 PTKc_ALK_LTK Catalytic 99.9 3.2E-26 6.9E-31 266.0 18.0 198 1-213 66-276 (277)
193 cd06643 STKc_SLK Catalytic dom 99.9 5.4E-26 1.2E-30 264.7 19.9 198 1-211 59-262 (282)
194 KOG0665 Jun-N-terminal kinase 99.9 3.7E-27 8.1E-32 256.6 9.0 197 1-224 72-316 (369)
195 cd05060 PTKc_Syk_like Catalyti 99.9 4.7E-26 1E-30 261.4 18.6 197 1-214 53-254 (257)
196 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 3.6E-26 7.8E-31 262.7 17.6 191 1-212 56-257 (258)
197 KOG0193 Serine/threonine prote 99.9 6.3E-27 1.4E-31 273.4 11.4 199 2-213 446-651 (678)
198 cd05088 PTKc_Tie2 Catalytic do 99.9 2.4E-26 5.2E-31 270.8 16.6 195 2-214 66-279 (303)
199 cd05032 PTKc_InsR_like Catalyt 99.9 3.6E-26 7.8E-31 265.2 17.8 195 1-212 66-275 (277)
200 cd07878 STKc_p38beta_MAPK11 Ca 99.9 1.2E-26 2.5E-31 278.5 14.0 191 1-211 71-298 (343)
201 cd06631 STKc_YSK4 Catalytic do 99.9 4.2E-26 9.1E-31 263.0 18.1 200 1-211 59-262 (265)
202 cd05114 PTKc_Tec_Rlk Catalytic 99.9 5.9E-26 1.3E-30 260.4 19.2 196 1-212 56-255 (256)
203 cd08219 STKc_Nek3 Catalytic do 99.9 3.4E-26 7.4E-31 262.1 17.2 191 1-211 55-252 (255)
204 cd05082 PTKc_Csk Catalytic dom 99.9 4.3E-26 9.2E-31 261.6 18.0 193 1-213 56-254 (256)
205 cd08223 STKc_Nek4 Catalytic do 99.9 5.3E-26 1.1E-30 260.7 18.4 194 1-211 56-254 (257)
206 cd05059 PTKc_Tec_like Catalyti 99.9 5.3E-26 1.1E-30 260.9 18.2 196 1-212 56-255 (256)
207 cd05111 PTK_HER3 Pseudokinase 99.9 5.9E-26 1.3E-30 264.1 18.8 196 1-214 66-267 (279)
208 cd06615 PKc_MEK Catalytic doma 99.9 5.6E-26 1.2E-30 268.3 18.8 192 1-211 56-287 (308)
209 cd05113 PTKc_Btk_Bmx Catalytic 99.9 5.1E-26 1.1E-30 261.1 18.0 196 1-212 56-255 (256)
210 KOG0574 STE20-like serine/thre 99.9 1.5E-27 3.1E-32 254.9 4.5 194 1-211 85-283 (502)
211 cd05574 STKc_phototropin_like 99.9 5.8E-26 1.3E-30 269.1 18.7 201 1-211 58-289 (316)
212 cd05609 STKc_MAST Catalytic do 99.9 6E-26 1.3E-30 267.6 18.8 201 1-211 58-273 (305)
213 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 5.9E-26 1.3E-30 261.6 18.2 188 1-212 61-261 (262)
214 cd05101 PTKc_FGFR2 Catalytic d 99.9 5.9E-26 1.3E-30 267.6 18.6 198 2-214 79-295 (304)
215 cd05115 PTKc_Zap-70 Catalytic 99.9 7.4E-26 1.6E-30 260.0 18.9 200 1-215 52-255 (257)
216 cd05033 PTKc_EphR Catalytic do 99.9 1E-25 2.2E-30 260.0 20.1 197 1-214 62-264 (266)
217 KOG0275 Conserved WD40 repeat- 99.9 1.4E-25 3E-30 240.2 19.3 292 1057-1472 212-507 (508)
218 PTZ00266 NIMA-related protein 99.9 3.4E-26 7.3E-31 293.0 17.4 194 1-211 69-295 (1021)
219 cd07855 STKc_ERK5 Catalytic do 99.9 2.8E-26 6.1E-31 274.1 15.8 199 1-211 61-294 (334)
220 cd05042 PTKc_Aatyk Catalytic d 99.9 5.5E-26 1.2E-30 262.7 17.8 203 1-212 52-267 (269)
221 cd05047 PTKc_Tie Catalytic dom 99.9 5.4E-26 1.2E-30 263.0 17.6 195 2-214 54-267 (270)
222 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 6.8E-26 1.5E-30 262.9 18.4 191 1-212 73-273 (274)
223 cd05068 PTKc_Frk_like Catalyti 99.9 9E-26 2E-30 259.7 19.3 195 1-213 58-259 (261)
224 cd05576 STKc_RPK118_like Catal 99.9 2.7E-26 5.9E-31 260.2 14.7 186 2-211 43-234 (237)
225 cd07831 STKc_MOK Catalytic dom 99.9 4.6E-26 9.9E-31 265.0 16.9 192 2-211 56-279 (282)
226 cd05630 STKc_GRK6 Catalytic do 99.9 4.1E-26 8.9E-31 266.3 16.5 193 1-211 57-261 (285)
227 cd07843 STKc_CDC2L1 Catalytic 99.9 6.7E-26 1.4E-30 265.5 18.3 195 1-211 61-290 (293)
228 KOG0986 G protein-coupled rece 99.9 2E-26 4.4E-31 259.7 13.1 192 2-211 243-446 (591)
229 PHA03210 serine/threonine kina 99.9 5.8E-26 1.3E-30 284.8 18.8 195 1-211 220-454 (501)
230 cd08216 PK_STRAD Pseudokinase 99.9 4.5E-26 9.7E-31 269.8 16.8 203 1-211 56-295 (314)
231 KOG0612 Rho-associated, coiled 99.9 2.1E-26 4.5E-31 284.3 14.3 197 3-211 134-338 (1317)
232 cd06651 STKc_MEKK3 Catalytic d 99.9 6.7E-26 1.4E-30 261.6 17.7 196 1-211 61-261 (266)
233 cd06612 STKc_MST1_2 Catalytic 99.9 8.2E-26 1.8E-30 258.8 18.3 194 1-211 55-253 (256)
234 cd05099 PTKc_FGFR4 Catalytic d 99.9 7.7E-26 1.7E-30 267.9 18.6 196 2-214 76-292 (314)
235 cd05624 STKc_MRCK_beta Catalyt 99.9 3.9E-26 8.5E-31 272.4 16.1 200 1-211 58-266 (331)
236 KOG0263 Transcription initiati 99.9 2.2E-25 4.8E-30 266.3 22.3 259 1050-1385 370-654 (707)
237 PF00069 Pkinase: Protein kina 99.9 1.1E-26 2.3E-31 266.6 10.8 195 1-211 55-257 (260)
238 cd05039 PTKc_Csk_like Catalyti 99.9 9.5E-26 2.1E-30 258.6 18.6 193 1-213 57-254 (256)
239 cd06637 STKc_TNIK Catalytic do 99.9 1.3E-25 2.7E-30 260.0 19.8 198 2-211 61-269 (272)
240 cd06658 STKc_PAK5 Catalytic do 99.9 5.4E-26 1.2E-30 266.3 16.8 193 1-211 76-272 (292)
241 cd05035 PTKc_Axl_like Catalyti 99.9 8.5E-26 1.8E-30 261.3 18.3 199 1-214 58-271 (273)
242 cd05109 PTKc_HER2 Catalytic do 99.9 8.9E-26 1.9E-30 262.5 18.5 195 1-213 66-266 (279)
243 cd06644 STKc_STK10_LOK Catalyt 99.9 1.2E-25 2.5E-30 263.4 19.5 199 1-211 66-269 (292)
244 KOG0273 Beta-transducin family 99.9 7.2E-25 1.6E-29 246.8 24.8 289 1052-1472 173-480 (524)
245 cd06611 STKc_SLK_like Catalyti 99.9 7.2E-26 1.6E-30 263.3 17.6 199 1-211 59-262 (280)
246 cd05098 PTKc_FGFR1 Catalytic d 99.9 7.6E-26 1.7E-30 267.0 17.9 199 2-215 82-299 (307)
247 cd06654 STKc_PAK1 Catalytic do 99.9 1.1E-25 2.5E-30 264.1 19.1 193 1-211 74-270 (296)
248 cd05051 PTKc_DDR Catalytic dom 99.9 9.1E-26 2E-30 264.6 18.3 198 1-213 76-295 (296)
249 cd06613 STKc_MAP4K3_like Catal 99.9 9.7E-26 2.1E-30 259.2 18.1 197 1-211 57-260 (262)
250 cd05055 PTKc_PDGFR Catalytic d 99.9 1.2E-25 2.6E-30 264.8 19.2 196 2-214 97-300 (302)
251 cd05086 PTKc_Aatyk2 Catalytic 99.9 1.6E-25 3.6E-30 258.7 20.0 203 1-212 52-266 (268)
252 cd08221 STKc_Nek9 Catalytic do 99.9 1.1E-25 2.4E-30 257.9 18.3 192 1-212 56-254 (256)
253 cd05577 STKc_GRK Catalytic dom 99.9 7.7E-26 1.7E-30 262.8 17.1 193 1-211 50-254 (277)
254 cd07841 STKc_CDK7 Catalytic do 99.9 7.3E-26 1.6E-30 265.8 17.1 195 1-211 59-282 (298)
255 cd05075 PTKc_Axl Catalytic dom 99.9 1.2E-25 2.5E-30 260.2 18.4 197 1-214 57-270 (272)
256 cd05054 PTKc_VEGFR Catalytic d 99.9 7.9E-26 1.7E-30 270.3 17.5 196 2-214 69-332 (337)
257 cd06630 STKc_MEKK1 Catalytic d 99.9 8.4E-26 1.8E-30 260.7 17.1 198 1-211 60-264 (268)
258 cd07832 STKc_CCRK Catalytic do 99.9 8.6E-26 1.9E-30 263.3 17.4 196 1-211 56-282 (286)
259 cd07844 STKc_PCTAIRE_like Cata 99.9 1.2E-25 2.5E-30 263.1 18.5 195 1-211 60-288 (291)
260 KOG0286 G-protein beta subunit 99.9 2.1E-24 4.5E-29 230.4 26.0 260 1043-1378 81-343 (343)
261 cd06638 STKc_myosinIIIA Cataly 99.9 1.2E-25 2.7E-30 262.1 18.4 199 2-212 73-284 (286)
262 cd05611 STKc_Rim15_like Cataly 99.9 1E-25 2.2E-30 259.0 17.3 190 1-211 54-251 (260)
263 cd05148 PTKc_Srm_Brk Catalytic 99.9 1.3E-25 2.8E-30 258.2 18.1 196 1-213 59-259 (261)
264 cd05040 PTKc_Ack_like Catalyti 99.9 1.5E-25 3.3E-30 256.9 18.7 197 1-212 53-255 (257)
265 cd05044 PTKc_c-ros Catalytic d 99.9 1.5E-25 3.2E-30 259.0 18.5 197 1-212 56-267 (269)
266 cd05058 PTKc_Met_Ron Catalytic 99.9 1.6E-25 3.5E-30 257.5 18.8 200 1-213 53-257 (262)
267 cd06619 PKc_MKK5 Catalytic dom 99.9 1.9E-25 4E-30 259.9 19.4 188 1-211 56-253 (279)
268 cd05045 PTKc_RET Catalytic dom 99.9 1.4E-25 2.9E-30 262.6 18.1 197 1-214 60-285 (290)
269 cd08226 PK_STRAD_beta Pseudoki 99.9 1E-25 2.2E-30 268.5 17.2 203 1-211 56-308 (328)
270 cd08228 STKc_Nek6 Catalytic do 99.9 1.8E-25 3.9E-30 257.9 18.6 197 1-214 59-264 (267)
271 cd06655 STKc_PAK2 Catalytic do 99.9 1.8E-25 3.9E-30 262.4 18.8 192 1-211 73-269 (296)
272 cd05632 STKc_GRK5 Catalytic do 99.9 1.3E-25 2.9E-30 262.0 17.6 193 1-211 57-261 (285)
273 PF07714 Pkinase_Tyr: Protein 99.9 3.6E-26 7.8E-31 262.9 12.4 197 1-212 58-259 (259)
274 cd06609 STKc_MST3_like Catalyt 99.9 1.7E-25 3.6E-30 259.4 18.1 193 1-211 56-251 (274)
275 cd05072 PTKc_Lyn Catalytic dom 99.9 1.6E-25 3.4E-30 257.6 17.8 195 1-213 58-259 (261)
276 cd06656 STKc_PAK3 Catalytic do 99.9 1E-25 2.2E-30 264.6 16.4 193 1-211 73-269 (297)
277 cd07847 STKc_CDKL1_4 Catalytic 99.9 1.3E-25 2.9E-30 261.7 17.2 195 1-211 57-283 (286)
278 cd05578 STKc_Yank1 Catalytic d 99.9 6.8E-26 1.5E-30 260.1 14.3 193 1-211 57-255 (258)
279 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 2.7E-25 5.9E-30 259.0 19.6 198 1-213 63-279 (283)
280 cd07850 STKc_JNK Catalytic dom 99.9 6.6E-26 1.4E-30 273.1 14.7 191 1-211 72-311 (353)
281 cd06642 STKc_STK25-YSK1 Cataly 99.9 1.5E-25 3.3E-30 260.3 17.1 193 1-211 59-253 (277)
282 cd05105 PTKc_PDGFR_alpha Catal 99.9 2.2E-25 4.8E-30 271.4 19.3 196 2-214 99-396 (400)
283 cd07865 STKc_CDK9 Catalytic do 99.9 1.1E-25 2.4E-30 265.7 16.1 199 1-211 68-307 (310)
284 cd06659 STKc_PAK6 Catalytic do 99.9 1.7E-25 3.7E-30 262.8 17.4 193 1-211 75-271 (297)
285 cd07860 STKc_CDK2_3 Catalytic 99.9 1.2E-25 2.6E-30 262.0 16.0 195 1-211 56-281 (284)
286 cd07835 STKc_CDK1_like Catalyt 99.9 1.4E-25 3.1E-30 261.1 16.7 195 1-211 55-280 (283)
287 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 2.1E-25 4.6E-30 260.3 18.1 198 1-211 56-262 (286)
288 cd05097 PTKc_DDR_like Catalyti 99.9 2.6E-25 5.7E-30 260.8 18.9 198 1-213 74-294 (295)
289 cd06624 STKc_ASK Catalytic dom 99.9 3.2E-25 7E-30 256.1 19.3 196 1-211 62-265 (268)
290 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 2.9E-25 6.4E-30 256.7 18.9 203 1-212 52-267 (269)
291 cd05085 PTKc_Fer Catalytic dom 99.9 3.6E-25 7.9E-30 252.7 19.3 196 1-212 49-248 (250)
292 cd07870 STKc_PFTAIRE2 Catalyti 99.9 4.3E-25 9.3E-30 258.4 20.3 195 1-211 60-288 (291)
293 cd06626 STKc_MEKK4 Catalytic d 99.9 3.6E-25 7.8E-30 254.7 19.3 200 1-211 56-261 (264)
294 cd05041 PTKc_Fes_like Catalyti 99.9 3.3E-25 7.1E-30 253.3 18.7 198 1-213 49-250 (251)
295 cd06632 STKc_MEKK1_plant Catal 99.9 2.5E-25 5.4E-30 255.0 17.6 194 1-211 59-255 (258)
296 cd05579 STKc_MAST_like Catalyt 99.9 1.3E-25 2.8E-30 258.1 15.3 201 1-211 50-257 (265)
297 cd05100 PTKc_FGFR3 Catalytic d 99.9 2.5E-25 5.5E-30 265.9 18.3 199 2-215 76-293 (334)
298 cd06608 STKc_myosinIII_like Ca 99.9 2E-25 4.3E-30 258.3 16.9 198 2-211 61-272 (275)
299 cd07845 STKc_CDK10 Catalytic d 99.9 2.9E-25 6.2E-30 262.3 18.6 195 1-211 63-290 (309)
300 cd05066 PTKc_EphR_A Catalytic 99.9 3.9E-25 8.6E-30 255.3 19.3 197 1-213 62-264 (267)
301 cd06636 STKc_MAP4K4_6 Catalyti 99.9 2E-25 4.3E-30 259.9 16.9 198 2-211 71-279 (282)
302 cd06640 STKc_MST4 Catalytic do 99.9 3.2E-25 7E-30 257.6 18.4 193 1-211 59-253 (277)
303 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 2.5E-25 5.4E-30 255.3 17.2 191 1-212 58-258 (259)
304 cd06617 PKc_MKK3_6 Catalytic d 99.9 1.9E-25 4.1E-30 260.0 16.5 197 1-211 57-261 (283)
305 cd06629 STKc_MAPKKK_Bck1_like 99.9 4.6E-25 1E-29 255.4 19.5 198 1-211 65-269 (272)
306 cd06605 PKc_MAPKK Catalytic do 99.9 1.5E-25 3.2E-30 258.2 15.3 192 1-211 56-257 (265)
307 cd05043 PTK_Ryk Pseudokinase d 99.9 3E-25 6.5E-30 258.1 18.0 196 1-213 65-274 (280)
308 cd06652 STKc_MEKK2 Catalytic d 99.9 3.7E-25 8.1E-30 255.1 18.4 196 1-211 61-261 (265)
309 KOG1026 Nerve growth factor re 99.9 1.5E-25 3.1E-30 273.9 15.6 198 1-213 546-760 (774)
310 KOG0319 WD40-repeat-containing 99.9 2.8E-24 6.1E-29 253.5 25.7 315 1041-1472 129-575 (775)
311 smart00219 TyrKc Tyrosine kina 99.9 4.5E-25 9.8E-30 252.7 18.8 195 1-211 58-257 (258)
312 cd06623 PKc_MAPKK_plant_like C 99.9 3.7E-25 8.1E-30 254.5 18.1 194 1-211 56-256 (264)
313 cd05095 PTKc_DDR2 Catalytic do 99.9 4.4E-25 9.6E-30 259.1 19.1 198 1-213 76-295 (296)
314 KOG0316 Conserved WD40 repeat- 99.9 5.1E-24 1.1E-28 220.6 24.4 251 1050-1384 9-261 (307)
315 cd07849 STKc_ERK1_2_like Catal 99.9 1.5E-25 3.3E-30 268.0 15.4 197 1-211 60-292 (336)
316 cd06607 STKc_TAO Catalytic dom 99.9 5.4E-25 1.2E-29 259.8 19.9 193 1-211 72-267 (307)
317 cd05063 PTKc_EphR_A2 Catalytic 99.9 5.7E-25 1.2E-29 254.0 19.7 200 1-214 63-266 (268)
318 KOG0318 WD40 repeat stress pro 99.9 3.2E-23 6.9E-28 236.1 33.1 365 1050-1472 182-558 (603)
319 cd05050 PTKc_Musk Catalytic do 99.9 4E-25 8.8E-30 258.2 18.4 198 1-213 65-287 (288)
320 cd07842 STKc_CDK8_like Catalyt 99.9 2.1E-25 4.6E-30 264.0 16.3 198 1-211 59-313 (316)
321 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 4.8E-25 1E-29 257.1 18.8 198 1-214 63-282 (284)
322 cd05613 STKc_MSK1_N N-terminal 99.9 4.2E-25 9.1E-30 258.4 18.3 196 2-211 63-268 (290)
323 PTZ00024 cyclin-dependent prot 99.9 2.6E-25 5.6E-30 265.9 16.4 202 1-211 77-313 (335)
324 cd05046 PTK_CCK4 Pseudokinase 99.9 4.1E-25 8.8E-30 256.2 17.5 197 1-213 65-274 (275)
325 cd05057 PTKc_EGFR_like Catalyt 99.9 6.7E-25 1.5E-29 255.1 19.4 198 1-214 66-267 (279)
326 cd05056 PTKc_FAK Catalytic dom 99.9 6.7E-25 1.4E-29 253.8 19.0 193 1-214 64-264 (270)
327 cd05034 PTKc_Src_like Catalyti 99.9 5.1E-25 1.1E-29 253.2 17.9 196 1-212 58-258 (261)
328 cd07858 STKc_TEY_MAPK_plant Ca 99.9 2.3E-25 5E-30 266.6 15.6 195 1-211 61-291 (337)
329 PRK13184 pknD serine/threonine 99.9 4.8E-25 1.1E-29 281.6 19.4 203 1-213 59-288 (932)
330 cd05581 STKc_PDK1 Catalytic do 99.9 1.9E-25 4.2E-30 259.2 14.5 199 3-211 61-277 (280)
331 cd08218 STKc_Nek1 Catalytic do 99.9 4E-25 8.8E-30 253.3 16.9 194 1-211 56-253 (256)
332 cd05083 PTKc_Chk Catalytic dom 99.9 5.7E-25 1.2E-29 251.9 18.1 192 1-213 56-252 (254)
333 cd08229 STKc_Nek7 Catalytic do 99.9 6.2E-25 1.4E-29 253.4 18.5 196 1-213 59-263 (267)
334 cd06639 STKc_myosinIIIB Cataly 99.9 8.5E-25 1.8E-29 255.9 19.7 197 2-211 77-287 (291)
335 cd05123 STKc_AGC Catalytic dom 99.9 4.3E-25 9.3E-30 251.9 16.8 194 1-211 50-247 (250)
336 PLN00009 cyclin-dependent kina 99.9 5.1E-25 1.1E-29 258.2 17.9 195 1-211 58-284 (294)
337 cd06917 STKc_NAK1_like Catalyt 99.9 7.7E-25 1.7E-29 254.2 19.1 193 2-211 60-255 (277)
338 cd05112 PTKc_Itk Catalytic dom 99.9 7.1E-25 1.5E-29 251.3 18.6 196 1-212 56-255 (256)
339 cd06610 STKc_OSR1_SPAK Catalyt 99.9 5.1E-25 1.1E-29 253.8 17.4 199 1-211 56-264 (267)
340 KOG0285 Pleiotropic regulator 99.9 2.3E-24 5E-29 234.6 21.3 263 1041-1380 175-439 (460)
341 cd08217 STKc_Nek2 Catalytic do 99.9 4.7E-25 1E-29 253.5 17.0 194 1-211 56-262 (265)
342 cd08220 STKc_Nek8 Catalytic do 99.9 5.6E-25 1.2E-29 251.9 17.6 193 1-211 56-253 (256)
343 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 7.1E-25 1.5E-29 252.1 18.4 195 1-212 58-257 (260)
344 cd07846 STKc_CDKL2_3 Catalytic 99.9 2.4E-25 5.1E-30 259.7 14.5 195 1-211 57-283 (286)
345 cd05071 PTKc_Src Catalytic dom 99.9 1.1E-24 2.4E-29 250.9 19.9 195 1-212 58-257 (262)
346 cd06633 STKc_TAO3 Catalytic do 99.9 1.3E-24 2.8E-29 257.3 20.8 193 1-211 78-273 (313)
347 cd05065 PTKc_EphR_B Catalytic 99.9 6.8E-25 1.5E-29 253.6 18.0 199 1-213 62-266 (269)
348 cd05069 PTKc_Yes Catalytic dom 99.9 1.1E-24 2.3E-29 250.7 19.5 196 1-213 58-258 (260)
349 cd06648 STKc_PAK_II Catalytic 99.9 7.8E-25 1.7E-29 255.6 18.5 193 1-211 73-269 (285)
350 cd06635 STKc_TAO1 Catalytic do 99.9 9.6E-25 2.1E-29 258.9 19.6 191 1-211 82-277 (317)
351 KOG0696 Serine/threonine prote 99.9 9.5E-26 2.1E-30 250.0 10.0 186 3-205 409-595 (683)
352 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 5.9E-25 1.3E-29 256.4 17.2 192 1-211 60-266 (284)
353 cd07852 STKc_MAPK15 Catalytic 99.9 6.8E-25 1.5E-29 262.5 18.1 198 2-211 65-295 (337)
354 cd07837 STKc_CdkB_plant Cataly 99.9 5.7E-25 1.2E-29 257.8 16.8 194 2-211 59-291 (295)
355 KOG4236 Serine/threonine prote 99.9 4.7E-26 1E-30 258.8 7.2 193 1-211 620-819 (888)
356 PHA02882 putative serine/threo 99.9 1.3E-24 2.8E-29 255.0 19.4 200 1-211 80-292 (294)
357 cd05110 PTKc_HER4 Catalytic do 99.9 7.6E-25 1.6E-29 258.0 17.5 196 1-214 66-267 (303)
358 cd07836 STKc_Pho85 Catalytic d 99.9 4.2E-25 9.1E-30 257.3 15.0 195 1-211 55-281 (284)
359 KOG0643 Translation initiation 99.9 7.6E-24 1.7E-28 223.3 22.8 296 1053-1471 5-314 (327)
360 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 1.5E-24 3.2E-29 250.1 18.9 195 1-214 59-264 (267)
361 cd07838 STKc_CDK4_6_like Catal 99.9 7.4E-25 1.6E-29 255.4 16.6 193 1-211 58-284 (287)
362 cd06616 PKc_MKK4 Catalytic dom 99.9 1.2E-24 2.5E-29 254.3 18.2 195 2-211 61-267 (288)
363 cd06657 STKc_PAK4 Catalytic do 99.9 9.4E-25 2E-29 255.8 17.4 193 1-211 74-270 (292)
364 cd06641 STKc_MST3 Catalytic do 99.9 1.3E-24 2.8E-29 252.5 18.3 193 1-211 59-253 (277)
365 cd07833 STKc_CDKL Catalytic do 99.9 7.1E-25 1.5E-29 255.8 16.2 196 1-211 57-285 (288)
366 cd07834 STKc_MAPK Catalytic do 99.9 3.2E-25 7E-30 264.4 13.4 198 1-211 56-289 (330)
367 cd08225 STKc_Nek5 Catalytic do 99.9 9.7E-25 2.1E-29 250.1 16.8 194 1-211 56-254 (257)
368 cd06606 STKc_MAPKKK Catalytic 99.9 1.9E-24 4.1E-29 247.1 19.2 196 1-211 56-257 (260)
369 cd06634 STKc_TAO2 Catalytic do 99.9 1.7E-24 3.6E-29 255.7 19.0 191 1-211 72-267 (308)
370 cd06627 STKc_Cdc7_like Catalyt 99.9 2E-24 4.4E-29 246.7 19.1 194 1-211 56-251 (254)
371 cd05122 PKc_STE Catalytic doma 99.9 1.6E-24 3.5E-29 246.7 18.0 192 1-211 54-251 (253)
372 cd06614 STKc_PAK Catalytic dom 99.9 1.7E-24 3.7E-29 252.7 18.6 193 1-211 72-270 (286)
373 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 1.9E-24 4E-29 252.0 18.9 197 1-213 62-281 (284)
374 KOG0313 Microtubule binding pr 99.9 1.8E-23 4E-28 230.2 25.1 282 1057-1472 104-416 (423)
375 cd05107 PTKc_PDGFR_beta Cataly 99.9 1.5E-24 3.4E-29 263.8 18.6 195 3-214 100-398 (401)
376 cd07857 STKc_MPK1 Catalytic do 99.9 1.2E-24 2.7E-29 259.7 17.4 198 2-211 60-292 (332)
377 cd08530 STKc_CNK2-like Catalyt 99.9 1E-24 2.2E-29 249.6 15.9 192 1-211 56-253 (256)
378 cd08215 STKc_Nek Catalytic dom 99.9 1.5E-24 3.2E-29 248.1 17.2 194 1-211 56-255 (258)
379 cd05067 PTKc_Lck_Blk Catalytic 99.9 1.7E-24 3.8E-29 248.8 17.8 196 1-213 58-258 (260)
380 cd08528 STKc_Nek10 Catalytic d 99.9 2E-24 4.2E-29 249.7 18.1 192 1-212 66-267 (269)
381 cd07840 STKc_CDK9_like Catalyt 99.9 1.1E-24 2.3E-29 253.9 16.1 196 1-211 55-284 (287)
382 KOG0194 Protein tyrosine kinas 99.9 3.3E-25 7.1E-30 263.9 11.8 196 1-213 218-418 (474)
383 KOG0640 mRNA cleavage stimulat 99.9 1.3E-23 2.8E-28 224.7 22.6 303 1051-1472 105-424 (430)
384 cd06618 PKc_MKK7 Catalytic dom 99.9 1.8E-24 3.9E-29 253.9 17.9 196 2-211 72-273 (296)
385 cd07866 STKc_BUR1 Catalytic do 99.9 8.6E-25 1.9E-29 258.1 15.2 202 1-211 64-308 (311)
386 KOG0295 WD40 repeat-containing 99.9 7.9E-24 1.7E-28 232.0 21.1 256 1041-1378 132-404 (406)
387 KOG1027 Serine/threonine prote 99.9 1.9E-25 4.1E-30 269.3 9.2 195 2-211 561-767 (903)
388 cd08222 STKc_Nek11 Catalytic d 99.9 1.1E-24 2.3E-29 250.6 14.7 193 1-211 59-257 (260)
389 cd06647 STKc_PAK_I Catalytic d 99.9 1.5E-24 3.3E-29 254.1 16.0 193 1-211 73-269 (293)
390 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 2.8E-24 6.1E-29 250.2 17.8 198 1-214 63-282 (284)
391 cd05583 STKc_MSK_N N-terminal 99.9 2.5E-24 5.5E-29 251.5 17.4 196 2-211 63-266 (288)
392 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 3.8E-24 8.2E-29 250.0 18.6 192 1-211 56-266 (287)
393 KOG1187 Serine/threonine prote 99.9 2.7E-24 5.9E-29 255.6 17.3 196 1-213 128-350 (361)
394 cd05073 PTKc_Hck Catalytic dom 99.9 4.3E-24 9.3E-29 245.6 18.4 195 1-212 58-257 (260)
395 cd07854 STKc_MAPK4_6 Catalytic 99.9 1.6E-24 3.5E-29 259.7 15.4 197 1-211 59-300 (342)
396 cd07830 STKc_MAK_like Catalyti 99.9 1.7E-24 3.8E-29 252.0 15.2 192 3-211 57-280 (283)
397 cd05118 STKc_CMGC Catalytic do 99.9 1.6E-24 3.6E-29 252.0 14.9 195 1-211 55-280 (283)
398 cd05103 PTKc_VEGFR2 Catalytic 99.9 3.7E-24 7.9E-29 256.8 18.3 196 2-214 69-338 (343)
399 cd07864 STKc_CDK12 Catalytic d 99.9 2.8E-24 6E-29 252.9 16.9 196 1-211 63-299 (302)
400 KOG0276 Vesicle coat complex C 99.9 3.2E-23 6.9E-28 239.4 24.9 249 1052-1381 7-258 (794)
401 cd07829 STKc_CDK_like Catalyti 99.9 1.8E-24 3.8E-29 251.6 14.9 194 1-211 55-279 (282)
402 KOG0268 Sof1-like rRNA process 99.9 3.5E-24 7.6E-29 234.1 16.0 283 1050-1472 58-343 (433)
403 cd07879 STKc_p38delta_MAPK13 C 99.9 3E-24 6.5E-29 257.4 17.0 190 1-211 71-297 (342)
404 KOG1151 Tousled-like protein k 99.9 1.6E-24 3.5E-29 241.9 13.3 205 1-211 524-741 (775)
405 cd06653 STKc_MEKK3_like_1 Cata 99.9 4.2E-24 9.2E-29 246.3 17.5 196 1-211 61-261 (264)
406 KOG0291 WD40-repeat-containing 99.9 1.7E-22 3.6E-27 238.2 30.7 287 1052-1472 259-548 (893)
407 cd07851 STKc_p38 Catalytic dom 99.9 1.4E-24 3.1E-29 260.4 13.1 191 1-211 71-298 (343)
408 cd05074 PTKc_Tyro3 Catalytic d 99.9 5.4E-24 1.2E-28 246.5 17.5 199 1-214 58-271 (273)
409 KOG0645 WD40 repeat protein [G 99.9 6.2E-23 1.3E-27 217.3 23.7 254 1050-1380 52-311 (312)
410 KOG1006 Mitogen-activated prot 99.9 2E-25 4.2E-30 236.4 4.7 194 2-211 121-327 (361)
411 KOG0671 LAMMER dual specificit 99.9 5.1E-25 1.1E-29 245.5 8.2 186 6-211 153-406 (415)
412 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 4.5E-24 9.7E-29 254.3 16.7 191 1-211 66-288 (328)
413 KOG0318 WD40 repeat stress pro 99.9 4.4E-22 9.6E-27 226.8 31.0 292 1050-1472 51-348 (603)
414 cd07877 STKc_p38alpha_MAPK14 C 99.9 6.1E-24 1.3E-28 255.1 16.9 191 1-211 73-300 (345)
415 cd07880 STKc_p38gamma_MAPK12 C 99.9 5.1E-24 1.1E-28 255.5 15.9 191 1-211 71-298 (343)
416 KOG0266 WD40 repeat-containing 99.9 9.2E-23 2E-27 252.0 27.0 261 1043-1380 185-454 (456)
417 KOG0278 Serine/threonine kinas 99.9 2.7E-23 5.8E-28 216.8 18.1 282 1053-1472 9-295 (334)
418 KOG0643 Translation initiation 99.9 6.8E-23 1.5E-27 216.2 21.3 290 1025-1380 18-317 (327)
419 KOG0281 Beta-TrCP (transducin 99.9 7.3E-24 1.6E-28 229.3 13.7 264 1040-1385 218-482 (499)
420 KOG0608 Warts/lats-like serine 99.9 6.6E-24 1.4E-28 246.1 13.7 198 3-211 688-928 (1034)
421 KOG1035 eIF-2alpha kinase GCN2 99.9 8.7E-24 1.9E-28 263.5 15.4 185 17-211 669-871 (1351)
422 KOG1095 Protein tyrosine kinas 99.9 7.9E-24 1.7E-28 268.0 15.1 192 1-212 752-958 (1025)
423 KOG0292 Vesicle coat complex C 99.9 3.3E-22 7.1E-27 238.2 27.2 270 1039-1391 31-332 (1202)
424 KOG0306 WD40-repeat-containing 99.9 2.3E-22 5E-27 236.9 25.6 281 1053-1472 368-662 (888)
425 KOG0695 Serine/threonine prote 99.9 7.9E-24 1.7E-28 229.1 11.9 187 2-205 309-504 (593)
426 KOG0293 WD40 repeat-containing 99.9 1.8E-22 4E-27 223.4 22.8 252 1049-1382 260-515 (519)
427 KOG4257 Focal adhesion tyrosin 99.9 1.1E-23 2.4E-28 244.1 13.1 194 1-212 448-646 (974)
428 KOG0277 Peroxisomal targeting 99.9 4.6E-22 9.9E-27 208.7 23.1 283 1061-1472 11-307 (311)
429 cd00200 WD40 WD40 domain, foun 99.9 2.1E-21 4.6E-26 222.4 30.4 254 1042-1378 34-289 (289)
430 cd05610 STKc_MASTL Catalytic d 99.9 5.2E-23 1.1E-27 266.0 18.4 91 1-91 61-152 (669)
431 KOG0292 Vesicle coat complex C 99.9 5.6E-22 1.2E-26 236.2 25.3 255 1054-1388 5-288 (1202)
432 KOG0296 Angio-associated migra 99.9 1.2E-21 2.6E-26 215.2 25.7 255 1043-1380 90-398 (399)
433 KOG0288 WD40 repeat protein Ti 99.9 1E-22 2.2E-27 226.4 17.2 289 1052-1472 169-459 (459)
434 KOG1094 Discoidin domain recep 99.9 2E-23 4.3E-28 241.4 11.9 199 1-214 592-803 (807)
435 smart00220 S_TKc Serine/Threon 99.9 7.3E-23 1.6E-27 231.3 16.5 193 1-211 44-241 (244)
436 KOG0664 Nemo-like MAPK-related 99.9 1E-24 2.2E-29 230.7 0.9 196 1-211 109-343 (449)
437 KOG0313 Microtubule binding pr 99.9 9E-22 2E-26 216.9 23.9 275 1040-1379 126-417 (423)
438 PLN00181 protein SPA1-RELATED; 99.9 1.5E-21 3.2E-26 258.8 30.9 278 1079-1472 457-736 (793)
439 KOG0278 Serine/threonine kinas 99.9 1.2E-22 2.6E-27 211.9 15.3 261 1040-1385 40-302 (334)
440 KOG0274 Cdc4 and related F-box 99.9 1.5E-21 3.2E-26 240.4 27.4 287 1042-1472 190-480 (537)
441 KOG0310 Conserved WD40 repeat- 99.9 9.9E-22 2.1E-26 223.4 23.6 276 1058-1470 26-305 (487)
442 KOG1407 WD40 repeat protein [F 99.9 2.8E-21 6.1E-26 203.6 25.1 284 1052-1471 14-308 (313)
443 KOG0587 Traf2- and Nck-interac 99.9 5.5E-23 1.2E-27 249.2 14.0 199 1-211 73-282 (953)
444 KOG0265 U5 snRNP-specific prot 99.9 1.4E-21 3.1E-26 209.8 22.1 249 1098-1472 39-294 (338)
445 KOG0670 U4/U6-associated splic 99.9 4.3E-24 9.3E-29 243.6 3.0 189 4-211 494-746 (752)
446 PLN03225 Serine/threonine-prot 99.9 1.2E-22 2.6E-27 256.1 16.0 192 14-211 205-450 (566)
447 KOG0668 Casein kinase II, alph 99.9 5.7E-23 1.2E-27 213.1 10.2 197 2-225 91-329 (338)
448 KOG0196 Tyrosine kinase, EPH ( 99.9 3.2E-23 7E-28 247.1 8.9 197 1-213 687-889 (996)
449 KOG4278 Protein tyrosine kinas 99.9 1.4E-22 3.1E-27 233.9 14.0 194 1-212 320-520 (1157)
450 KOG0274 Cdc4 and related F-box 99.9 3.1E-21 6.8E-26 237.5 26.4 257 1042-1388 231-490 (537)
451 KOG1446 Histone H3 (Lys4) meth 99.9 5.2E-20 1.1E-24 200.3 32.6 259 1051-1390 7-272 (311)
452 KOG0276 Vesicle coat complex C 99.9 1.1E-21 2.3E-26 226.9 20.1 243 1102-1472 9-255 (794)
453 KOG0984 Mitogen-activated prot 99.9 8.4E-23 1.8E-27 209.4 9.4 165 2-180 103-274 (282)
454 KOG0305 Anaphase promoting com 99.9 1E-20 2.3E-25 224.2 27.7 274 1062-1472 181-459 (484)
455 KOG1036 Mitotic spindle checkp 99.9 1.8E-20 3.9E-25 202.7 26.5 253 1058-1389 13-271 (323)
456 KOG0300 WD40 repeat-containing 99.9 4.5E-21 9.7E-26 205.5 20.8 307 1048-1472 138-474 (481)
457 KOG0283 WD40 repeat-containing 99.9 3.2E-21 6.9E-26 233.1 22.2 257 1051-1382 259-578 (712)
458 KOG0289 mRNA splicing factor [ 99.9 1.5E-20 3.2E-25 210.1 25.2 283 1059-1471 220-503 (506)
459 KOG4250 TANK binding protein k 99.9 1.2E-22 2.6E-27 242.4 9.0 144 1-161 68-225 (732)
460 KOG0973 Histone transcription 99.9 1.1E-20 2.4E-25 233.4 26.2 301 1056-1471 10-352 (942)
461 KOG0316 Conserved WD40 repeat- 99.9 8.2E-21 1.8E-25 197.0 21.0 223 1041-1301 41-266 (307)
462 PTZ00420 coronin; Provisional 99.9 2.7E-20 5.8E-25 229.9 29.5 226 1042-1296 57-297 (568)
463 PTZ00421 coronin; Provisional 99.9 3.6E-20 7.7E-25 228.2 30.3 266 1057-1388 19-298 (493)
464 PLN00113 leucine-rich repeat r 99.9 5.2E-22 1.1E-26 270.5 15.5 190 1-215 740-951 (968)
465 KOG0640 mRNA cleavage stimulat 99.9 3.2E-21 6.9E-26 206.6 17.6 259 1049-1379 163-425 (430)
466 KOG1152 Signal transduction se 99.9 9.6E-23 2.1E-27 235.7 6.4 141 2-160 627-769 (772)
467 PTZ00421 coronin; Provisional 99.9 4.1E-20 8.8E-25 227.6 29.9 220 1053-1301 70-299 (493)
468 KOG4283 Transcription-coupled 99.9 9.1E-21 2E-25 202.0 20.6 310 1055-1471 40-362 (397)
469 KOG0199 ACK and related non-re 99.9 7E-22 1.5E-26 232.2 13.1 195 1-211 168-368 (1039)
470 KOG0277 Peroxisomal targeting 99.9 7.4E-21 1.6E-25 199.7 18.9 243 1057-1379 59-308 (311)
471 KOG0282 mRNA splicing factor [ 99.9 1.9E-21 4.2E-26 220.5 15.4 255 1042-1378 240-503 (503)
472 KOG2096 WD40 repeat protein [G 99.9 4.5E-20 9.8E-25 198.7 25.0 304 1050-1471 78-399 (420)
473 KOG0647 mRNA export protein (c 99.9 4E-20 8.6E-25 198.8 24.4 255 1057-1384 26-285 (347)
474 KOG0289 mRNA splicing factor [ 99.9 4.2E-20 9E-25 206.5 23.9 210 1046-1291 249-459 (506)
475 KOG0772 Uncharacterized conser 99.9 3.3E-20 7.1E-25 210.8 23.2 229 1048-1294 157-396 (641)
476 KOG0305 Anaphase promoting com 99.9 5.4E-20 1.2E-24 218.1 25.3 258 1042-1384 200-465 (484)
477 smart00750 KIND kinase non-cat 99.9 4.7E-21 1E-25 206.6 14.2 156 28-213 1-167 (176)
478 PTZ00420 coronin; Provisional 99.9 2.5E-19 5.5E-24 221.3 31.3 202 1075-1299 49-256 (568)
479 KOG0308 Conserved WD40 repeat- 99.8 1.8E-20 3.9E-25 218.5 19.8 263 1056-1391 19-296 (735)
480 KOG0288 WD40 repeat protein Ti 99.8 1.3E-20 2.9E-25 209.7 17.8 252 1042-1377 200-458 (459)
481 KOG0200 Fibroblast/platelet-de 99.8 8E-21 1.7E-25 242.0 18.5 194 2-214 360-578 (609)
482 KOG0264 Nucleosome remodeling 99.8 7.7E-20 1.7E-24 207.2 23.2 278 1051-1380 117-404 (422)
483 KOG0639 Transducin-like enhanc 99.8 4.7E-20 1E-24 208.2 19.8 284 1056-1471 417-701 (705)
484 KOG3653 Transforming growth fa 99.8 6.2E-21 1.3E-25 217.8 12.7 204 1-214 261-502 (534)
485 KOG0301 Phospholipase A2-activ 99.8 2.7E-19 6E-24 210.3 26.0 243 1048-1380 4-249 (745)
486 KOG0641 WD40 repeat protein [G 99.8 1.1E-18 2.5E-23 179.3 27.3 260 1049-1380 80-349 (350)
487 KOG0306 WD40-repeat-containing 99.8 1.8E-19 3.9E-24 212.9 23.7 268 1041-1381 396-665 (888)
488 PLN03224 probable serine/threo 99.8 2.2E-20 4.8E-25 229.6 16.7 202 4-211 237-500 (507)
489 KOG1025 Epidermal growth facto 99.8 6.5E-21 1.4E-25 227.8 11.2 198 1-214 755-956 (1177)
490 KOG0294 WD40 repeat-containing 99.8 4.5E-19 9.7E-24 191.7 24.2 269 1073-1472 4-279 (362)
491 KOG1345 Serine/threonine kinas 99.8 4.7E-21 1E-25 203.8 8.4 189 3-207 80-280 (378)
492 KOG0300 WD40 repeat-containing 99.8 1.2E-19 2.5E-24 194.7 18.9 269 1040-1383 171-479 (481)
493 KOG0294 WD40 repeat-containing 99.8 4.1E-19 8.8E-24 192.1 23.0 244 1050-1382 35-283 (362)
494 KOG0641 WD40 repeat protein [G 99.8 6.2E-18 1.3E-22 174.0 30.3 304 1050-1471 25-346 (350)
495 KOG0646 WD40 repeat protein [G 99.8 7.3E-19 1.6E-23 199.2 23.4 279 1075-1472 12-305 (476)
496 KOG0308 Conserved WD40 repeat- 99.8 3.4E-19 7.3E-24 208.0 20.3 222 1050-1294 65-287 (735)
497 KOG0576 Mitogen-activated prot 99.8 8.1E-21 1.8E-25 223.6 7.0 197 1-211 69-271 (829)
498 KOG0299 U3 snoRNP-associated p 99.8 2.3E-18 4.9E-23 194.8 25.9 267 1051-1384 135-414 (479)
499 KOG0269 WD40 repeat-containing 99.8 3.7E-19 7.9E-24 211.4 19.7 293 1050-1468 34-334 (839)
500 KOG2052 Activin A type IB rece 99.8 9.8E-20 2.1E-24 206.5 14.1 204 1-212 262-500 (513)
No 1
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-211 Score=1892.56 Aligned_cols=1327 Identities=40% Similarity=0.620 Sum_probs=974.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
++|||+++|..+.+++++.|||++|+..+|||+|+.||+|...|++||++||++||..||+.||+|||||.|||||++|+
T Consensus 78 ~~~pn~lPfqk~~~t~kAAylvRqyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWN 157 (1431)
T KOG1240|consen 78 MKAPNCLPFQKVLVTDKAAYLVRQYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWN 157 (1431)
T ss_pred hcCCcccchHHHHHhhHHHHHHHHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeec
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCC-CCccchHHHHHHHHHHHHhC-CC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAP-LKPSMDIFAVGCVIAELFLE-VP 158 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~-~t~~~DIwSlG~il~eLltg-~~ 158 (1472)
|+.|+||+.+||+++|+|+|++|.+||+|++++.||+|||+|....+...+.+... ++++|||||+||+++|||+. .|
T Consensus 158 W~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~P 237 (1431)
T KOG1240|consen 158 WLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRP 237 (1431)
T ss_pred hhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999997664444445555 89999999999999999986 99
Q ss_pred CCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcccCCCCCChhhhhhhhccCCCCC
Q 000470 159 FFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLHS 237 (1472)
Q Consensus 159 pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fp~~f~~~l~~~~~~~~~~~~ 237 (1472)
+|+++++.+|+++ .+.+...+.++.+..+++||..|+++||++|.+|+++|+.+++..||+|||+||++|+.++.++..
T Consensus 238 lF~LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~FP~yFy~FL~~Y~~~~~~~~~ 317 (1431)
T KOG1240|consen 238 LFTLSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVFPEYFYSFLYDYLDRFVPLTT 317 (1431)
T ss_pred cccHHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhccccHHHHHHHHHHHHHhcCCccc
Confidence 9999999999998 555667888999999999999999999999999999999999999999999999999999988763
Q ss_pred cchhhhhccchHHHHHhhhCCCCCCCCCCCCCCCCccCchhhHHHHHHHHhHHHHHHHhhHHHHHhhhcccchhhhcccc
Q 000470 238 DMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSVKESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLLGDI 317 (1472)
Q Consensus 238 ~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (1472)
...+. ...-....++. .++..++-.++ .+.|+
T Consensus 318 ~~p~~-------------~~~~~gs~i~d---------~~~~~~~p~n~--------------------------~~~~~ 349 (1431)
T KOG1240|consen 318 STPIS-------------DNTCTGSTIED---------NVKLLDGPTNK--------------------------IYRDF 349 (1431)
T ss_pred cCccc-------------cccccCccccc---------ccccccCcccc--------------------------hhhhh
Confidence 22211 01111111110 00000000011 22344
Q ss_pred cccccCCCCCCccCCCCCCCCCCCCCcccccccCccccccchhhhhhhhhhhcCCCCcccccccccccccccccCCCCCC
Q 000470 318 STLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDT 397 (1472)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (1472)
..+|+.....-.+. .+. ..+.++.+..+.+....+.+++.......++-.....|++.++.
T Consensus 350 ~~~~h~ln~~~~~~-----------------~~~--~~S~De~~~~~~~al~~~r~~~~~l~~~~dl~~~~q~~~~~~~~ 410 (1431)
T KOG1240|consen 350 SQICHCLNFPLIKD-----------------GGT--ITSSDEIIDSISKALEFSRHLIENLDVIQDLKPEKQLWTARSSP 410 (1431)
T ss_pred hccccccccccccc-----------------ccc--ccCCcHHHHHHHHHHhhhhhhcccchhhhccchHHhcccccCCc
Confidence 44444433211110 000 01122333333333322222222222222221222244443322
Q ss_pred CCCCCCCCCCCCcccccchhhhHHHHhhhcccCCchhHHHHHHHHHHHhccCCcccccccccceeeecccCCcchhHHHH
Q 000470 398 FGMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAA 477 (1472)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~i~ls~i~s~~R~~~~~~sk~~al~ll~~~s~~~~de~~ldrilPy~~~ll~d~~~~Vr~~a 477 (1472)
+ ....+++|++||+++||||||+++.+++|++||+||..||+|++||.||||||||+|+|+.|+.+.|||+|
T Consensus 411 ~--------~~~~~~~ga~l~vs~lts~IR~lk~~~tK~~ALeLl~~lS~~i~de~~LDRVlPY~v~l~~Ds~a~Vra~A 482 (1431)
T KOG1240|consen 411 N--------IKDPKEEGAVLFVSVLTSCIRALKTIQTKLAALELLQELSTYIDDEVKLDRVLPYFVHLLMDSEADVRATA 482 (1431)
T ss_pred c--------cCCccccceeeeHHHHHHHHHhhhcchhHHHHHHHHHHHhhhcchHHHHhhhHHHHHHHhcCchHHHHHHH
Confidence 1 12467899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccccccCCCCCcccccccccccCCCCCC-CCchhhHHHHhhhHHHHHHHHHHHHHHHHhhhcccccccCCCC
Q 000470 478 LETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDD-PEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPH 556 (1472)
Q Consensus 478 l~~lt~~l~~v~~~~~~~~~iF~eYilP~l~~l~~d-~~~~vr~~~A~~l~~La~~a~rfl~~~~~~~~~~~~~~~~~~~ 556 (1472)
|+|||++|.+|+.+||+|+|||||||||.|++|+.| ...+||+|||+||+.||.||.||||.+|.++..|.++..++.
T Consensus 483 l~Tlt~~L~~Vr~~~~~daniF~eYlfP~L~~l~~d~~~~~vRiayAsnla~LA~tA~rFle~~q~~~~~g~~n~~nse- 561 (1431)
T KOG1240|consen 483 LETLTELLALVRDIPPSDANIFPEYLFPHLNHLLNDSSAQIVRIAYASNLAQLAKTAYRFLELTQELRQAGMLNDPNSE- 561 (1431)
T ss_pred HHHHHHHHhhccCCCcccchhhHhhhhhhhHhhhccCccceehhhHHhhHHHHHHHHHHHHHHHHHHHhcccccCcccc-
Confidence 999999999999999999999999999999999999 789999999999999999999999999999988877654321
Q ss_pred CCCCCCCccchhhhccChHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHhcccchhcccCcccccccccccccccccC
Q 000470 557 KSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLND 636 (1472)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~i~~~~~~ll~~~d~~~~vk~all~~i~~Lc~FFG~~ktnd~iL~hlit~LNd 636 (1472)
...+. ++++++++|++.+++.|++||+| +++.||||||++|.+||+||||+|+||+|||||||||||
T Consensus 562 ---------t~~~~--~~~~~~~~L~~~V~~~v~sLlsd--~~~~Vkr~Lle~i~~LC~FFGk~ksND~iLshLiTfLND 628 (1431)
T KOG1240|consen 562 ---------TAPEQ--NYNTELQALHHTVEQMVSSLLSD--SPPIVKRALLESIIPLCVFFGKEKSNDVILSHLITFLND 628 (1431)
T ss_pred ---------ccccc--ccchHHHHHHHHHHHHHHHHHcC--CchHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHhcC
Confidence 11223 34679999999999999999995 679999999999999999999999999999999999999
Q ss_pred CChhHHHHHHhccceeeeeeccchhhHhHHHHHHhhcCCCchHHHHHHHHHHHHHHHcCCCchHHHHHHHHhhccccccC
Q 000470 637 RDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYP 716 (1472)
Q Consensus 637 ~d~~LR~aff~~i~~v~~~vG~~s~e~~ilPll~q~l~D~ee~Vv~~~l~~l~~l~~~gL~~k~~~~~~~~~~~~ll~HP 716 (1472)
|||+||+||||+|+|||.||||+|+|+||||||+|||+|+||+||++||+||+.|||+|||+|+++.|++..|+||||||
T Consensus 629 kDw~LR~aFfdsI~gvsi~VG~rs~seyllPLl~Q~ltD~EE~Viv~aL~~ls~Lik~~ll~K~~v~~i~~~v~PlL~hP 708 (1431)
T KOG1240|consen 629 KDWRLRGAFFDSIVGVSIFVGWRSVSEYLLPLLQQGLTDGEEAVIVSALGSLSILIKLGLLRKPAVKDILQDVLPLLCHP 708 (1431)
T ss_pred ccHHHHHHHHhhccceEEEEeeeeHHHHHHHHHHHhccCcchhhHHHHHHHHHHHHHhcccchHHHHHHHHhhhhheeCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHhcCCccceeEEEeeccccccccCCCccCCHHHHHhccCCCCcHHHHHHHHHHhh-hchHHHHHh
Q 000470 717 SQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENAR-SSDMLERQR 795 (1472)
Q Consensus 717 n~wIR~~~~~~i~~~~~~l~~ad~~c~l~P~l~p~l~~~~~~~~~~~~ll~~l~~p~sr~v~~~~~~~~~-~~~~~~~~~ 795 (1472)
|.|||+++++||++++++|+.|||||+|||+|||||+.++.++.+++.|++||||||||+||+++++|.. ...-..-++
T Consensus 709 N~WIR~~~~~iI~~~~~~ls~advyc~l~P~irpfl~~~v~~i~s~~~LlsclkpPVsRsv~~~l~r~~~ens~f~k~l~ 788 (1431)
T KOG1240|consen 709 NLWIRRAVLGIIAAIARQLSAADVYCKLMPLIRPFLERPVIQIESKEVLLSCLKPPVSRSVFNQLLRWSDENSSFWKKLL 788 (1431)
T ss_pred hHHHHHHHHHHHHHHHhhhhhhhheEEeehhhHHhhhccHhhhcchHHHHHHhcCCCcHHHHHHHHHHhhcchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986 222123334
Q ss_pred hhhcccCCCchhhhhhHhhhcCCCcccccc---------cCCcccCCcCCCCCCCCCCCCCcccCCCcChhhhHhhcccc
Q 000470 796 KIWYNTSSQSKQQETADLLKRGAEDLSSIK---------CWPDKQQSSEGHRPAGDTSKQPEFAQSDDNDGAKLRTLGSL 866 (1472)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~ 866 (1472)
..|+..+.+++.|..++...+..+...+-. ...+++++.++.... + -.+.+++.|+..+++.+
T Consensus 789 ~~~~~s~~~s~d~~~~~~~~k~~g~l~~~e~~~~~~~~~~~~~~i~S~~~~e~~-------e-~~l~~k~~~~~~~r~~~ 860 (1431)
T KOG1240|consen 789 ERHYSSSGNSRDEFIKNYSSKRYGFLPFEEGAGSSKWSNTGFKKIKSEGKTELV-------E-DKLLEKDIFLIRSRKPK 860 (1431)
T ss_pred HHhhhccCccchhhhhcchhhhcccCCccccccchhhhhhhcceeecccccccc-------c-cccchhchhhhcccCCc
Confidence 455555555555443222111111111111 111111111111110 0 01223344444444432
Q ss_pred hhccCccccCCCCCCC-ccccccccccccccccCccccCCCCCCCCcccccccccccCCCCccccccccccccccCCCCC
Q 000470 867 VYNASSMADIRDPLCP-EKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYSFSMDKRAMGNLPVASDSVLQVNSLGIGSSTM 945 (1472)
Q Consensus 867 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1472)
........ -.+...+ +.....++...++.+.+... .+..++..++..|....++...........+.+.+++.+.
T Consensus 861 ~~~s~~~~-l~d~~~~~~~~~~~~v~~~~~n~~~t~~---~P~~~~~~~~~~d~n~~~~~~~~~~~~n~~~~l~~~~~~~ 936 (1431)
T KOG1240|consen 861 SNISNRVL-LDDPAYPRNTNGREGVLTRQVNLVGTII---EPSNIHARVRRKDSNREGNESNMESPQNSKHLLPIGSPNK 936 (1431)
T ss_pred cchhhhhh-hcCcccccccCCceeeeccccccccccc---ccccchhhhhhhhccccCCCccccCCCcchhhccCCCCCc
Confidence 21111110 0111111 11111222222221111111 1222333333333222221111011111112222222111
Q ss_pred CCCCcccCCCC-CCC-CCCCCCCccCCccccCCCCccceeeccCCCCCccc-cccccccCCCCCCCCCcccccccccCCC
Q 000470 946 PWMDTTNQSFS-LAS-SVPPPNLVSGSFSISNGSKQFYRVVHEPEGRENDQ-MASVNCKFPEMGTSGTAKGSSINVEDAS 1022 (1472)
Q Consensus 946 ~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1022 (1472)
.|.+ |.... +.. +.+-...+++++......+..+.+.+...++.+.+ ...+.+...++++...++.......+..
T Consensus 937 ~~~~--~~~~~t~~~~~~~vp~~ts~~~~~~t~~~~~~~~~p~~ns~~~~~~~r~~~~~~dL~~~~~~~~~~~ss~~~s~ 1014 (1431)
T KOG1240|consen 937 LNHT--GSPRSTLLLDGNSVPTLTSSSVRVVTNLKPTKPVMPVPNSTANNQVERSLTCLNDLEMLTVSIPKRPSSESISH 1014 (1431)
T ss_pred cccc--CCCcccccccCCccceeeccceeeeeccCCcccccccCCCCcccchhHHHHHHHhhhhhhhhcccccchhhccc
Confidence 1111 11000 000 00001111222222222222222233333332221 1233444555565555554443333321
Q ss_pred CCCCCCCCCccccccCCCCCCcccccceeeeccccccceeEEEEcCCC-CEEEEEeCCCCEEEEeCCCCccc-cccccce
Q 000470 1023 SPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDH-SFFVSASDDSTVKVWDSRKLEKD-ISFRSRL 1100 (1472)
Q Consensus 1023 ~~~~~~g~~~~~~~~~~~~~~W~p~G~lV~~l~~H~~~V~~lafspd~-~~laSgS~DGtVkvWD~~~~e~~-~~~~~~~ 1100 (1472)
.-.+.+.|..... ..++++|+|+|.+|+||+||+..|+.++.++++ .+|+|||+||+||+||+++.++. .++++++
T Consensus 1015 -p~~~~~ep~~~~~-~~p~~gW~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~l 1092 (1431)
T KOG1240|consen 1015 -PCLLNSEPSAWSV-GSPPPGWNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSEL 1092 (1431)
T ss_pred -hhhhccCCchhhc-CCCCCCCCccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeE
Confidence 1111121222211 356789999999999999999999999998765 89999999999999999998876 8899999
Q ss_pred EEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeec-CCCCcEEEEEEecCCCCCceE
Q 000470 1101 TYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKD-TKEGAIVTLVNYNTDNCASHM 1179 (1472)
Q Consensus 1101 t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~d~~s~~~ 1179 (1472)
+|...++++.++.++++++.+|+++.||.|++.+++.. ...++... ..+..+ ...|..+.+.+|..+.++ ..
T Consensus 1093 tys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~-----~~~~~~~~-~~ri~n~~~~g~vv~m~a~~~~~~S-~~ 1165 (1431)
T KOG1240|consen 1093 TYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHY-----NVSKRVAT-QVRIPNLKKDGVVVSMHAFTAIVQS-HV 1165 (1431)
T ss_pred EEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEcccc-----ccccceee-eeecccccCCCceEEeecccccccc-ee
Confidence 99988889999999999999999999999999999842 12222222 233333 356778889888887654 68
Q ss_pred EEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEE
Q 000470 1180 FMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMC 1259 (1472)
Q Consensus 1180 L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~ 1259 (1472)
++++|..+.|..||+|+...+|++++...+|.|+++|.||.++|+++||+.|.+.+||+||+.++.+|.+++..+|+++.
T Consensus 1166 lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~ 1245 (1431)
T KOG1240|consen 1166 LVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVW 1245 (1431)
T ss_pred EEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecCCCCCccccCCCCEEEEEE-cCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccccc
Q 000470 1260 LFVPPPNAAVSTTARPLIYVAA-GCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQK 1338 (1472)
Q Consensus 1260 ~~~p~~~~~~~~~~~~~l~vas-~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 1338 (1472)
. +|.... ....+.+++ +.++|.+|++++|.|..+++.++. .+.. .+. .|.+.
T Consensus 1246 ~-~~~~~~-----~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~--~p~l---s~~--~Ps~~-------------- 1298 (1431)
T KOG1240|consen 1246 L-CPTYPQ-----ESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDG--APIL---SYA--LPSND-------------- 1298 (1431)
T ss_pred e-eccCCC-----CceEEEecccCCCceeeeecccCcceEEEEcCCC--Ccch---hhh--ccccc--------------
Confidence 8 665430 122344444 678999999999999999997632 1111 111 11110
Q ss_pred ccccccCCCCCCcCCceEeccCCCCcEEEccCCCeEEEEeCCCCCCc-eEEeCCCCCCCCCCcceEEeecCceEEEEeee
Q 000470 1339 YRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRS-YCICGPNLKGVGNDEFYETRSSSGVQVVQERK 1417 (1472)
Q Consensus 1339 ~~~~~l~~~~~~~~~V~sl~~~p~g~llTgg~Dg~IrlWDl~~~~~s-~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 1417 (1472)
....+...++.|....++|+++|||+|++||.||...++.+ +.+.|+.........+|..+..+|.++++|..
T Consensus 1299 ------~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i 1372 (1431)
T KOG1240|consen 1299 ------ARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFI 1372 (1431)
T ss_pred ------CCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhccccccCCCccchhhh
Confidence 00123344677777778889999999999999999999998 77777766555678899999999999999965
Q ss_pred cCCcchhhh----hHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1418 RQPLTSKLT----AKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1418 ~~~~~~~~~----~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
..+.+...+ .....+....++..+|+|.|+|++.+..++.+|+++|+||+|||||
T Consensus 1373 ~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1373 IYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred hhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence 544433332 1222333344566789999999998888899999999999999997
No 2
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=1.8e-42 Score=457.64 Aligned_cols=308 Identities=14% Similarity=0.176 Sum_probs=221.7
Q ss_pred eccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCcccc-c-cccceEEeccCCceEEEEEec-CCCEEEEEeCCCc
Q 000470 1053 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDI-S-FRSRLTYHLEGSRALCTMMLR-HSAQVVVGACDGI 1129 (1472)
Q Consensus 1053 ~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~-~-~~~~~t~~~~~~~I~~v~f~~-~~~~las~s~DG~ 1129 (1472)
.+..|.+.|++++|+|++++|||||.||+|+|||........ . ........ +...+.+++|++ +++.|++++.||+
T Consensus 478 ~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~ 556 (793)
T PLN00181 478 DLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGV 556 (793)
T ss_pred cccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCe
Confidence 355699999999999999999999999999999986432110 0 01122233 345699999987 4789999999999
Q ss_pred EEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCc
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1209 (1472)
Q Consensus 1130 I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~ 1209 (1472)
|++||+.+. ..+. ....|...|.++.|+|.. +.+|++|+.||+|++||++++....++.. .
T Consensus 557 v~lWd~~~~-------------~~~~-~~~~H~~~V~~l~~~p~~--~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~---~ 617 (793)
T PLN00181 557 VQVWDVARS-------------QLVT-EMKEHEKRVWSIDYSSAD--PTLLASGSDDGSVKLWSINQGVSIGTIKT---K 617 (793)
T ss_pred EEEEECCCC-------------eEEE-EecCCCCCEEEEEEcCCC--CCEEEEEcCCCEEEEEECCCCcEEEEEec---C
Confidence 999999731 0112 223456678888999743 56999999999999999999988877764 4
Q ss_pred cceEEEEEc-CCCCEEEEEeCCCcEEEEECCCCc-ccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEE
Q 000470 1210 GYVSSLVTG-PCGNWFVSGSSRGVLTLWDLRFLV-PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1287 (1472)
Q Consensus 1210 g~Itsl~~s-p~g~~LvsGssdG~I~lWDlr~~~-~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~ 1287 (1472)
..+.++.|. ++|.+|++|+.||.|++||++... ++..+. .|...|..+.| .+ +.++++++.|+.|+
T Consensus 618 ~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~-~h~~~V~~v~f-~~----------~~~lvs~s~D~~ik 685 (793)
T PLN00181 618 ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMI-GHSKTVSYVRF-VD----------SSTLVSSSTDNTLK 685 (793)
T ss_pred CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEec-CCCCCEEEEEE-eC----------CCEEEEEECCCEEE
Confidence 679999995 579999999999999999999765 344443 46678888888 32 34789999999999
Q ss_pred EEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEE
Q 000470 1288 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL 1366 (1472)
Q Consensus 1288 VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~ll 1366 (1472)
+||+.++.... . . ..+....+|...+.++.+++++ +++
T Consensus 686 iWd~~~~~~~~-----~---~---------------------------------~~l~~~~gh~~~i~~v~~s~~~~~la 724 (793)
T PLN00181 686 LWDLSMSISGI-----N---E---------------------------------TPLHSFMGHTNVKNFVGLSVSDGYIA 724 (793)
T ss_pred EEeCCCCcccc-----C---C---------------------------------cceEEEcCCCCCeeEEEEcCCCCEEE
Confidence 99987531000 0 0 0000112445567888999877 778
Q ss_pred EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccce
Q 000470 1367 TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSI 1446 (1472)
Q Consensus 1367 Tgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I 1446 (1472)
+|+.|+.|++|+...+.......... .... .......|...|
T Consensus 725 sgs~D~~v~iw~~~~~~~~~s~~~~~--------------~~~~------------------------~~~~~~~~~~~V 766 (793)
T PLN00181 725 TGSETNEVFVYHKAFPMPVLSYKFKT--------------IDPV------------------------SGLEVDDASQFI 766 (793)
T ss_pred EEeCCCEEEEEECCCCCceEEEeccc--------------CCcc------------------------cccccCCCCcEE
Confidence 99999999999987553321111000 0000 000112377889
Q ss_pred eEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1447 LSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1447 ~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.+++ |++++.+|++|+.||.|+||+
T Consensus 767 ~~v~-ws~~~~~lva~~~dG~I~i~~ 791 (793)
T PLN00181 767 SSVC-WRGQSSTLVAANSTGNIKILE 791 (793)
T ss_pred EEEE-EcCCCCeEEEecCCCcEEEEe
Confidence 9995 999999999999999999996
No 3
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-39 Score=362.27 Aligned_cols=196 Identities=29% Similarity=0.326 Sum_probs=175.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+|||||+++++|+.....||||||++ |+|.+++-.++.+.+...+.+++||+.||.|||++||+||||||||||++.+
T Consensus 233 L~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~ 312 (475)
T KOG0615|consen 233 LSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSND 312 (475)
T ss_pred cCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccC
Confidence 689999999999999999999999999 6999999999999999999999999999999999999999999999999877
Q ss_pred ---CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 80 ---NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 80 ---~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
..+||+|||+||... ...++.|.|||+.|.|||++...+.. .+..++|||||||++|-+++|
T Consensus 313 ~e~~llKItDFGlAK~~g--------~~sfm~TlCGTpsYvAPEVl~~kg~~-------~~~~kVDiWSlGcvLfvcLsG 377 (475)
T KOG0615|consen 313 AEDCLLKITDFGLAKVSG--------EGSFMKTLCGTPSYVAPEVLASKGVE-------YYPSKVDIWSLGCVLFVCLSG 377 (475)
T ss_pred CcceEEEecccchhhccc--------cceehhhhcCCccccChhheecCCee-------cccchheeeeccceEEEEecc
Confidence 679999999999763 23467899999999999999755432 345699999999999999999
Q ss_pred CCCCCch-----HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELS-----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~-----~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.|||... -...+.++.|...+..+...+++.++||.+||..||++|||++|+|+|
T Consensus 378 ~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 378 YPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred CCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 9999643 245577888887776777778899999999999999999999999999
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.4e-37 Score=359.93 Aligned_cols=194 Identities=20% Similarity=0.243 Sum_probs=171.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+|||||+|+++||+..++|||.|+|. ++|.++++.++.++|.|++.+++||+.||.|||+++|+|||||..|+|++++
T Consensus 75 L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~ 154 (592)
T KOG0575|consen 75 LKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNEN 154 (592)
T ss_pred cCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCc
Confidence 689999999999999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
.+|||+|||+|.....++.. -.|.||||.|+|||++. ...++..+||||+||++|.|+.|+||
T Consensus 155 ~~VKIgDFGLAt~le~~~Er-------k~TlCGTPNYIAPEVl~----------k~gHsfEvDiWSlGcvmYtLL~G~PP 217 (592)
T KOG0575|consen 155 MNVKIGDFGLATQLEYDGER-------KKTLCGTPNYIAPEVLN----------KSGHSFEVDIWSLGCVMYTLLVGRPP 217 (592)
T ss_pred CcEEecccceeeeecCcccc-------cceecCCCcccChhHhc----------cCCCCCchhhhhhhhHHHhhhhCCCC
Confidence 99999999999877544222 25789999999999886 33568899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|+...+.+..+........+|...+.++++||.+||+.||.+|||++++|.|
T Consensus 218 Fetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 218 FETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 9987665543333333333555778899999999999999999999999998
No 5
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=5.1e-35 Score=319.63 Aligned_cols=341 Identities=15% Similarity=0.217 Sum_probs=251.0
Q ss_pred cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEe
Q 000470 1046 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1125 (1472)
Q Consensus 1046 p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s 1125 (1472)
|--++-+.+.||.++|.+++|+|+|+.+||||.|.|||+||+.+-. +..+..+|...|.|++|+|+|..||+|+
T Consensus 103 pvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeT------p~~t~KgH~~WVlcvawsPDgk~iASG~ 176 (480)
T KOG0271|consen 103 PVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTET------PLFTCKGHKNWVLCVAWSPDGKKIASGS 176 (480)
T ss_pred ccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCC------cceeecCCccEEEEEEECCCcchhhccc
Confidence 4456778899999999999999999999999999999999998754 6678889999999999999999999999
Q ss_pred CCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCC--CCCceEEEEEeCCCeEEEEeCCCCCcccee
Q 000470 1126 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTD--NCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1203 (1472)
Q Consensus 1126 ~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d--~~s~~~L~~at~dg~I~iwDlrt~~~~~~l 1203 (1472)
.||+|++||..+.. .+......|...|++++|.|- ......|++++.||.|+|||+..++++..+
T Consensus 177 ~dg~I~lwdpktg~-------------~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~l 243 (480)
T KOG0271|consen 177 KDGSIRLWDPKTGQ-------------QIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTL 243 (480)
T ss_pred cCCeEEEecCCCCC-------------cccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEe
Confidence 99999999987411 111223356667888888763 111458999999999999999999999888
Q ss_pred ecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEe----------ecCCCCCcc----
Q 000470 1204 KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCL----------FVPPPNAAV---- 1269 (1472)
Q Consensus 1204 ~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~----------~~p~~~~~~---- 1269 (1472)
.+ |...|+|++|.-+| ++.+|+.|++|++|+...+.+.+.++. |...|+.+.. |.|.+....
T Consensus 244 sg--HT~~VTCvrwGG~g-liySgS~DrtIkvw~a~dG~~~r~lkG-HahwvN~lalsTdy~LRtgaf~~t~~~~~~~se 319 (480)
T KOG0271|consen 244 SG--HTASVTCVRWGGEG-LIYSGSQDRTIKVWRALDGKLCRELKG-HAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSE 319 (480)
T ss_pred cc--CccceEEEEEcCCc-eEEecCCCceEEEEEccchhHHHhhcc-cchheeeeeccchhhhhccccccccccCCChHH
Confidence 77 99999999998665 999999999999999999888887764 5567777765 122222100
Q ss_pred ------------ccCCCCEEEEEEcCCeEEEEEcCCCe-EEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccc
Q 000470 1270 ------------STTARPLIYVAAGCNEVSLWNAENGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVN 1336 (1472)
Q Consensus 1270 ------------~~~~~~~l~vas~dg~V~VWDl~t~~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 1336 (1472)
-...+..+++|+.|.++.+|+-...+ ++.....+.. -.+...+++ ..+. .......
T Consensus 320 ~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~----lVn~V~fSP---d~r~----IASaSFD 388 (480)
T KOG0271|consen 320 EQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQA----LVNHVSFSP---DGRY----IASASFD 388 (480)
T ss_pred HHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhh----heeeEEECC---CccE----EEEeecc
Confidence 00112358888888899999864322 3222221111 111111111 1000 0000000
Q ss_pred cccccc------ccCCCCCCcCCceEeccCCCCc-EEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCc
Q 000470 1337 QKYRVD------ELNEPPPRLLGIRSLLPLPGGD-LLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSG 1409 (1472)
Q Consensus 1337 ~~~~~~------~l~~~~~~~~~V~sl~~~p~g~-llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~ 1409 (1472)
...+++ .+..+.+|...|+.++|+.|.+ +++|+.|.++++||+.+.+..+
T Consensus 389 kSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~----------------------- 445 (480)
T KOG0271|consen 389 KSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQ----------------------- 445 (480)
T ss_pred cceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecc-----------------------
Confidence 111221 2334578889999999999984 5599999999999998765533
Q ss_pred eEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1410 VQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1410 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.+.||.|.|.+| .|+++|..++||+.|.++++|+
T Consensus 446 ----------------------------DLpGh~DEVf~v-DwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 446 ----------------------------DLPGHADEVFAV-DWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred ----------------------------cCCCCCceEEEE-EecCCCceeecCCCceEEEeec
Confidence 234599999999 5999999999999999999996
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-36 Score=335.14 Aligned_cols=192 Identities=21% Similarity=0.170 Sum_probs=168.3
Q ss_pred CCCCCcceeeEEEEeCC-eEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDK-AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~-~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~ 77 (1472)
++||+||.||+.|..+. .++|+||||+ |+|.+.++..+.++|.....|+.|+++||.|||+ ++||||||||+|||++
T Consensus 134 ~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvN 213 (364)
T KOG0581|consen 134 CQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVN 213 (364)
T ss_pred CCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeec
Confidence 57999999999999998 5999999999 7999999988889999999999999999999996 9999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+.|.|||||||.++..... ...+..||..|||||++. +..|+.++||||||+.+.|+++|+
T Consensus 214 skGeVKicDFGVS~~lvnS---------~a~tfvGT~~YMsPERi~----------g~~Ys~~sDIWSLGLsllE~a~Gr 274 (364)
T KOG0581|consen 214 SKGEVKICDFGVSGILVNS---------IANTFVGTSAYMSPERIS----------GESYSVKSDIWSLGLSLLELAIGR 274 (364)
T ss_pred cCCCEEeccccccHHhhhh---------hcccccccccccChhhhc----------CCcCCcccceecccHHHHHHhhCC
Confidence 9999999999998866321 346788999999999986 447888999999999999999998
Q ss_pred CCCCch-----HHHH-HHhcCCCCCcccCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELS-----HLLA-YRRGQYDPSQHLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~-----~~~~-~~~~~~~~~~~l~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.||... .... +......+.+.++. ..++++++||..||++||.+|+++.|+++|
T Consensus 275 fP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 275 FPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 888653 2233 33344445666776 489999999999999999999999999998
No 7
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-35 Score=338.35 Aligned_cols=200 Identities=21% Similarity=0.270 Sum_probs=171.5
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||-|++++..|+++..+|+|+||++ |+|.++|++.+.|++..++.++.||+.||+|||++|||||||||||||++.+|
T Consensus 132 ~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm 211 (604)
T KOG0592|consen 132 GHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG 211 (604)
T ss_pred CCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC
Confidence 79999999999999999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCC---C---CceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 81 WLYLSDFASFKPTYIPYDDPS---D---FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~---~---~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
++||+|||.++.......... . ......+.+||..|.+||++. +...++.+|||+||||+|+|+
T Consensus 212 hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~----------~~~~~~~sDiWAlGCilyQml 281 (604)
T KOG0592|consen 212 HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLN----------DSPAGPSSDLWALGCILYQML 281 (604)
T ss_pred cEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhc----------CCCCCcccchHHHHHHHHHHh
Confidence 999999999997643322210 1 111124567999999999876 446788999999999999999
Q ss_pred hCCCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 155 LEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 155 tg~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.|+|||...+...+.+........++...++.+++||.++|.+||.+|++++||.+|
T Consensus 282 aG~PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 282 AGQPPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred cCCCCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 999999876654444444444444666677899999999999999999999999998
No 8
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-35 Score=345.47 Aligned_cols=194 Identities=21% Similarity=0.244 Sum_probs=173.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+.||||+++|+++++..++|+|.||++ |.|++++..++.|++.|+..+++||+.|+.|||..+||||||||||+|++..
T Consensus 69 i~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~ 148 (786)
T KOG0588|consen 69 IEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVK 148 (786)
T ss_pred hcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcc
Confidence 579999999999999999999999999 7999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+++||+|||+|-... ....+.|.||++.|.|||++.+..++ +.++||||+|+|||.|++|+.|
T Consensus 149 ~nIKIADFGMAsLe~--------~gklLeTSCGSPHYA~PEIV~G~pYd---------G~~sDVWSCGVILfALLtG~LP 211 (786)
T KOG0588|consen 149 NNIKIADFGMASLEV--------PGKLLETSCGSPHYAAPEIVSGRPYD---------GRPSDVWSCGVILFALLTGKLP 211 (786)
T ss_pred cCEeeeccceeeccc--------CCccccccCCCcccCCchhhcCCCCC---------CCccccchhHHHHHHHHhCCCC
Confidence 999999999986431 23357899999999999998755433 6789999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|+..++..+.........++|...+.++++||.+||..||++|+|.+|+++|
T Consensus 212 FdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 212 FDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred CCCccHHHHHHHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 9988776554444444445677788999999999999999999999999999
No 9
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-35 Score=311.48 Aligned_cols=199 Identities=22% Similarity=0.223 Sum_probs=173.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+.++++|+++...++|+|.|+ |.|+|++...-.+++.+.+.|++||+.|+.|||.++||||||||||||++++
T Consensus 80 ~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn 159 (411)
T KOG0599|consen 80 MGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDN 159 (411)
T ss_pred cCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccc
Confidence 589999999999999999999999999 9999999999899999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
.+++|+|||+++.....+ -+...||||.|+|||.+.++-++ ....|+..+|+|++|+|+|.|+.|.||
T Consensus 160 ~~i~isDFGFa~~l~~Ge--------kLrelCGTPgYLAPEtikC~m~e----~~pGYs~EVD~Wa~GVImyTLLaGcpP 227 (411)
T KOG0599|consen 160 MNIKISDFGFACQLEPGE--------KLRELCGTPGYLAPETIKCSMYE----NHPGYSKEVDEWACGVIMYTLLAGCPP 227 (411)
T ss_pred cceEEeccceeeccCCch--------hHHHhcCCCcccChhheeeeccc----CCCCccchhhHHHHHHHHHHHHcCCCc
Confidence 999999999998763222 24677899999999999765443 345799999999999999999999887
Q ss_pred CC-chHH---HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FE-LSHL---LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~-~~~~---~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|- ..++ ..+..+.|.....-+...+...++||.+||+.||.+|+|++|+|.|
T Consensus 228 FwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 228 FWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred hhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 74 3343 3355677876554444556679999999999999999999999999
No 10
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.3e-33 Score=313.53 Aligned_cols=283 Identities=17% Similarity=0.239 Sum_probs=242.9
Q ss_pred cccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC--CCEEEEEeCCCcEEE
Q 000470 1055 QEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH--SAQVVVGACDGIIHM 1132 (1472)
Q Consensus 1055 ~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~--~~~las~s~DG~I~v 1132 (1472)
-+-+.+|..+.||+|++.|||||.+|.+|||...++. ..+++.+|.+.|.++.|+|. +..+|+|+.||++++
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~------~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvkl 245 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCN------LLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKL 245 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcc------eeEEEeccccceeeEEEccCCCccceeeeccCCceee
Confidence 3567889999999999999999999999999998875 67889999999999999996 568999999999999
Q ss_pred EEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccce
Q 000470 1133 FSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYV 1212 (1472)
Q Consensus 1133 wdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~I 1212 (1472)
|+++... .+ .-..+|...|.-++|+|+ |++|++++.|.+-++||++++......++ |...|
T Consensus 246 w~~~~e~-------------~l-~~l~gH~~RVs~VafHPs---G~~L~TasfD~tWRlWD~~tk~ElL~QEG--Hs~~v 306 (459)
T KOG0272|consen 246 WKLSQET-------------PL-QDLEGHLARVSRVAFHPS---GKFLGTASFDSTWRLWDLETKSELLLQEG--HSKGV 306 (459)
T ss_pred eccCCCc-------------ch-hhhhcchhhheeeeecCC---CceeeecccccchhhcccccchhhHhhcc--ccccc
Confidence 9998310 11 112356677888899999 89999999999999999999988766665 89999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcC
Q 000470 1213 SSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1292 (1472)
Q Consensus 1213 tsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~ 1292 (1472)
.+++|.|+|..+++|+-|..-++||+|++.++..+.. |..+|..+.| +|++ ..+++|++|++++|||++
T Consensus 307 ~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~g-H~k~I~~V~f-sPNG---------y~lATgs~Dnt~kVWDLR 375 (459)
T KOG0272|consen 307 FSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAG-HIKEILSVAF-SPNG---------YHLATGSSDNTCKVWDLR 375 (459)
T ss_pred ceeEecCCCceeeccCccchhheeecccCcEEEEecc-cccceeeEeE-CCCc---------eEEeecCCCCcEEEeeec
Confidence 9999999999999999999999999999999988876 8889999999 7765 489999999999999999
Q ss_pred CCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCC-CC-cEEEccC
Q 000470 1293 NGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP-GG-DLLTGGT 1370 (1472)
Q Consensus 1293 t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p-~g-~llTgg~ 1370 (1472)
..++..++. +|..-|..+.|.| .| +|+|+|.
T Consensus 376 ~r~~ly~ip-----------------------------------------------AH~nlVS~Vk~~p~~g~fL~Tasy 408 (459)
T KOG0272|consen 376 MRSELYTIP-----------------------------------------------AHSNLVSQVKYSPQEGYFLVTASY 408 (459)
T ss_pred ccccceecc-----------------------------------------------cccchhhheEecccCCeEEEEccc
Confidence 876644332 3444688899998 44 7889999
Q ss_pred CCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEe
Q 000470 1371 DLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLG 1450 (1472)
Q Consensus 1371 Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va 1450 (1472)
|+++++|...+-.....+. ||.+.|.+++
T Consensus 409 D~t~kiWs~~~~~~~ksLa---------------------------------------------------GHe~kV~s~D 437 (459)
T KOG0272|consen 409 DNTVKIWSTRTWSPLKSLA---------------------------------------------------GHEGKVISLD 437 (459)
T ss_pred CcceeeecCCCcccchhhc---------------------------------------------------CCccceEEEE
Confidence 9999999977666554443 4999999995
Q ss_pred eeecCCcEEEEEcCCceEEEcC
Q 000470 1451 SVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1451 ~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+++++.+++|+|.|.+||+|.
T Consensus 438 -is~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 438 -ISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred -eccCCceEEEeccCceeeecc
Confidence 999999999999999999994
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-34 Score=320.53 Aligned_cols=194 Identities=20% Similarity=0.245 Sum_probs=170.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||.||+++..|++.+.+|||+||+. |.|+-.|.+.+.+++..++.++.+|+.||.|||++|||||||||||||++..
T Consensus 82 v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~ 161 (357)
T KOG0598|consen 82 IKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQ 161 (357)
T ss_pred CCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCC
Confidence 589999999999999999999999999 5999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|+++|+|||+++.....++ ...+.|||+.|||||++. +..|+.++|.||||+++|||++|.||
T Consensus 162 GHi~LtDFgL~k~~~~~~~-------~t~tfcGT~eYmAPEil~----------~~gy~~~vDWWsLGillYeML~G~pP 224 (357)
T KOG0598|consen 162 GHIKLTDFGLCKEDLKDGD-------ATRTFCGTPEYMAPEILL----------GKGYDKAVDWWSLGILLYEMLTGKPP 224 (357)
T ss_pred CcEEEeccccchhcccCCC-------ccccccCCccccChHHHh----------cCCCCcccchHhHHHHHHHHhhCCCC
Confidence 9999999999985532222 235679999999999887 34789999999999999999999999
Q ss_pred CCchHHHHHHhcCCCCC-cccCCCCCHHHHHHHHHhcccCcCCCC----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPS-QHLEKIPDSGIRKMILHMIQLEPELRF----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~-~~l~~~~~~~l~~LI~~mL~~dP~~Rp----sa~elL~~ 211 (1472)
|...+..++........ ...+...+.+++++|.++|.+||++|. .++++-+|
T Consensus 225 F~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 225 FYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred CcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence 99888766655444433 556666788999999999999999996 57777766
No 12
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=327.09 Aligned_cols=194 Identities=20% Similarity=0.326 Sum_probs=160.6
Q ss_pred CC-CCCcceeeEEEEeCC-eEEEEecccCCcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MS-STPCVHKKFWQETDK-AAYLLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~-HpNIv~~~~~~~~~~-~~~lV~Ey~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|+ ||||+++.+++.+.. .+|+|||||+.+||++++.|. .+++..++.|++||++||+|+|++|+.|||+||||||+.
T Consensus 65 ln~hpniikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~ 144 (538)
T KOG0661|consen 65 LNPHPNIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS 144 (538)
T ss_pred cCCCCcchhhHHHhhccCceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec
Confidence 46 999999999998766 999999999999999999865 499999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
....+||+|||+|+..... ..+ .....|++|+|||+++.. ..|+.++|||++|||++|+++-+
T Consensus 145 ~~~~iKiaDFGLARev~Sk----pPY----TeYVSTRWYRAPEvLLrs---------~~Ys~pvD~wA~GcI~aEl~sLr 207 (538)
T KOG0661|consen 145 GNDVIKIADFGLAREVRSK----PPY----TEYVSTRWYRAPEVLLRS---------GYYSSPVDMWAVGCIMAELYSLR 207 (538)
T ss_pred ccceeEecccccccccccC----CCc----chhhhcccccchHHhhhc---------cccCCchHHHHHHHHHHHHHHhc
Confidence 9899999999999977432 122 334458899999998743 47899999999999999999999
Q ss_pred CCCCch----HHHHHHhcCCCC--------------------------CcccCCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 000470 158 PFFELS----HLLAYRRGQYDP--------------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAES 207 (1472)
Q Consensus 158 ~pf~~~----~~~~~~~~~~~~--------------------------~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~e 207 (1472)
|+|.+. ++.++......| ...+-...+.++.+||.+|+.+||++||||+|
T Consensus 208 PLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~ 287 (538)
T KOG0661|consen 208 PLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQ 287 (538)
T ss_pred ccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHH
Confidence 999643 333332211110 01122235678999999999999999999999
Q ss_pred HHHH
Q 000470 208 YLQN 211 (1472)
Q Consensus 208 lL~~ 211 (1472)
+|+|
T Consensus 288 al~~ 291 (538)
T KOG0661|consen 288 ALQH 291 (538)
T ss_pred HhcC
Confidence 9998
No 13
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.9e-35 Score=313.64 Aligned_cols=203 Identities=27% Similarity=0.378 Sum_probs=164.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+|||+|.+.++|...+..+||+|||+.++.+-+...+ .++...++.+++|++.|+.|||+++|+||||||||||++..
T Consensus 58 LkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~ 137 (396)
T KOG0593|consen 58 LKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQN 137 (396)
T ss_pred cccchHHHHHHHHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecC
Confidence 68999999999999999999999999988777776644 48999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||||||+|+....|.+.- .....|.+|+|||.+. .+.+|++.+|||++||+++||++|.|.
T Consensus 138 gvvKLCDFGFAR~L~~pgd~Y-------TDYVATRWYRaPELLv---------GDtqYG~pVDiWAiGCv~aEl~~G~pL 201 (396)
T KOG0593|consen 138 GVVKLCDFGFARTLSAPGDNY-------TDYVATRWYRAPELLV---------GDTQYGKPVDIWAIGCVFAELLTGEPL 201 (396)
T ss_pred CcEEeccchhhHhhcCCcchh-------hhhhhhhhccChhhhc---------ccCcCCCcccchhhhHHHHHHhcCCcC
Confidence 999999999999875554432 3345688999999885 346899999999999999999999999
Q ss_pred CCch----HHHHHHhc---------------C-----CCCCc-c---cCC---CCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 160 FELS----HLLAYRRG---------------Q-----YDPSQ-H---LEK---IPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 160 f~~~----~~~~~~~~---------------~-----~~~~~-~---l~~---~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
|.+. ++..+++. . .-|.+ . +.. ..+.-+.+|+.+||+.||++|++.+|+
T Consensus 202 ~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~ql 281 (396)
T KOG0593|consen 202 WPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQL 281 (396)
T ss_pred CCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHH
Confidence 9643 33222211 1 00111 0 111 123467899999999999999999999
Q ss_pred HHHhhcccCCCCCChhhh
Q 000470 209 LQNYAAVVFPTYFSPFLH 226 (1472)
Q Consensus 209 L~~~~~~~fp~~f~~~l~ 226 (1472)
|.| +||..|+.
T Consensus 282 l~H-------~yFd~~~e 292 (396)
T KOG0593|consen 282 LHH-------PYFDGFIE 292 (396)
T ss_pred hcC-------hHHHHHHH
Confidence 999 67755444
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-34 Score=308.83 Aligned_cols=198 Identities=19% Similarity=0.223 Sum_probs=164.9
Q ss_pred CCCCCcceeeE-EEEe-CCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeecCC
Q 000470 1 MSSTPCVHKKF-WQET-DKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHE--KG--ICHGDI 69 (1472)
Q Consensus 1 l~HpNIv~~~~-~~~~-~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~--~g--IvH~DL 69 (1472)
|+|||||+|++ .|.+ ...++||||||. |+|.+.|+. +..+++..++.++.|++.||.+||. .+ |+||||
T Consensus 75 L~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDI 154 (375)
T KOG0591|consen 75 LNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDI 154 (375)
T ss_pred cCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccC
Confidence 69999999998 4444 445999999999 899998853 5569999999999999999999999 55 999999
Q ss_pred CCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
||.||+++.+|.|||+|||+++..... ..+..+..|||.||+||++. ..+|+.++||||+||+
T Consensus 155 KPaNIFl~~~gvvKLGDfGL~r~l~s~-------~tfA~S~VGTPyYMSPE~i~----------~~~Y~~kSDiWslGCl 217 (375)
T KOG0591|consen 155 KPANIFLTANGVVKLGDFGLGRFLSSK-------TTFAHSLVGTPYYMSPERIH----------ESGYNFKSDIWSLGCL 217 (375)
T ss_pred cchheEEcCCCceeeccchhHhHhcch-------hHHHHhhcCCCcccCHHHHh----------cCCCCcchhHHHHHHH
Confidence 999999999999999999999876321 22346778999999999886 4578999999999999
Q ss_pred HHHHHhCCCCCCchHHHHHHhcCCC-CCcccC-CCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcc
Q 000470 150 IAELFLEVPFFELSHLLAYRRGQYD-PSQHLE-KIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 215 (1472)
Q Consensus 150 l~eLltg~~pf~~~~~~~~~~~~~~-~~~~l~-~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 215 (1472)
+|||+.-++||.+.++..+.+.... ..+.+| .+.+.++++||..|+..||+.||+...++.+....
T Consensus 218 lyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~~ 285 (375)
T KOG0591|consen 218 LYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQSE 285 (375)
T ss_pred HHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHHH
Confidence 9999999999998887665443322 122244 67788999999999999999999987777775543
No 15
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=317.59 Aligned_cols=193 Identities=20% Similarity=0.267 Sum_probs=167.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++|||||.++++++.++.+|||||||. |+|.+||++++.+++..++.++.||+.||++||+++||||||||+|||++..
T Consensus 66 l~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~ 145 (429)
T KOG0595|consen 66 LKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTT 145 (429)
T ss_pred cCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccC
Confidence 689999999999999999999999999 7999999999999999999999999999999999999999999999999875
Q ss_pred ------CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHH
Q 000470 80 ------NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 80 ------~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 153 (1472)
-.+||+|||+++... ...+..+.||++.|||||++. ...|+.|+|+||+|+|+|++
T Consensus 146 ~~~~~~~~LKIADFGfAR~L~--------~~~~a~tlcGSplYMAPEV~~----------~~~YdAKADLWSiG~Ilyq~ 207 (429)
T KOG0595|consen 146 ARNDTSPVLKIADFGFARFLQ--------PGSMAETLCGSPLYMAPEVIM----------SQQYDAKADLWSIGTILYQC 207 (429)
T ss_pred CCCCCCceEEecccchhhhCC--------chhHHHHhhCCccccCHHHHH----------hccccchhhHHHHHHHHHHH
Confidence 358999999999763 233557899999999999875 45789999999999999999
Q ss_pred HhCCCCCCchHHHHHH---hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 154 FLEVPFFELSHLLAYR---RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 154 ltg~~pf~~~~~~~~~---~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
++|++||+.....++. +......+.++...+...++|+...|+++|..|.+.++.+.|
T Consensus 208 l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 208 LTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred HhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhh
Confidence 9999999866544433 322333344555666778899999999999999999888876
No 16
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-33 Score=333.10 Aligned_cols=194 Identities=23% Similarity=0.237 Sum_probs=168.2
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC-C
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW-N 80 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~-~ 80 (1472)
||||+++++++++...+|+||||+. |+|++++..++++.+.+++.++.||+.|++|||++||+||||||||||++.+ +
T Consensus 79 HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~ 158 (370)
T KOG0583|consen 79 HPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEG 158 (370)
T ss_pred CCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCC
Confidence 9999999999999999999999999 5999999998899999999999999999999999999999999999999999 9
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+||+|||++.... .......+.+|++.|+|||+|.... ..-+.++||||+|++||.|++|..||
T Consensus 159 ~~Kl~DFG~s~~~~-------~~~~~l~t~cGsp~Y~aPEvl~~~~--------~Y~g~~aDvWS~GViLy~ml~G~~PF 223 (370)
T KOG0583|consen 159 NLKLSDFGLSAISP-------GEDGLLKTFCGSPAYAAPEVLSGKG--------TYSGKAADVWSLGVILYVLLCGRLPF 223 (370)
T ss_pred CEEEeccccccccC-------CCCCcccCCCCCcccCCHHHhCCCC--------CcCCchhhhhhhHHHHHHHHhCCCCC
Confidence 99999999987552 1122457899999999999987432 02258999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCC-CHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIP-DSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~-~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+..+...+.+........++... ++++++||.+||..||.+|+++.++++|
T Consensus 224 ~d~~~~~l~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 224 DDSNVPNLYRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred CCccHHHHHHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 87765554443434344455555 8999999999999999999999999988
No 17
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=5.2e-31 Score=280.49 Aligned_cols=294 Identities=22% Similarity=0.332 Sum_probs=247.8
Q ss_pred eeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcE
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1130 (1472)
Q Consensus 1051 V~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I 1130 (1472)
..+|+||.+.|+++.|++|+++++|+|.||.+.|||.-+..|. .........|..++|+|.|+.+|+|+-|...
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~------haipl~s~WVMtCA~sPSg~~VAcGGLdN~C 121 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKV------HAIPLPSSWVMTCAYSPSGNFVACGGLDNKC 121 (343)
T ss_pred EEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccce------eEEecCceeEEEEEECCCCCeEEecCcCcee
Confidence 3789999999999999999999999999999999999876643 2333456779999999999999999999999
Q ss_pred EEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCcc
Q 000470 1131 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1210 (1472)
Q Consensus 1131 ~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g 1210 (1472)
.||++.+.. . .+...+.+....|..-+.++.|-.| ..|++++.|.++.+||+.+++....+.+ |.|
T Consensus 122 siy~ls~~d-~-------~g~~~v~r~l~gHtgylScC~f~dD----~~ilT~SGD~TCalWDie~g~~~~~f~G--H~g 187 (343)
T KOG0286|consen 122 SIYPLSTRD-A-------EGNVRVSRELAGHTGYLSCCRFLDD----NHILTGSGDMTCALWDIETGQQTQVFHG--HTG 187 (343)
T ss_pred EEEeccccc-c-------cccceeeeeecCccceeEEEEEcCC----CceEecCCCceEEEEEcccceEEEEecC--Ccc
Confidence 999997321 0 1112233334455566777778776 2899999999999999999999988876 999
Q ss_pred ceEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEE
Q 000470 1211 YVSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1289 (1472)
Q Consensus 1211 ~Itsl~~sp-~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VW 1289 (1472)
.|.++.+.| +++++++|+.|+..++||+|.+.++.++.. |.+.|+.+.| +|++. -+++|+.|+.+++|
T Consensus 188 DV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~g-hesDINsv~f-fP~G~---------afatGSDD~tcRly 256 (343)
T KOG0286|consen 188 DVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEG-HESDINSVRF-FPSGD---------AFATGSDDATCRLY 256 (343)
T ss_pred cEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecc-cccccceEEE-ccCCC---------eeeecCCCceeEEE
Confidence 999999999 999999999999999999999999999885 7889999999 88765 68999999999999
Q ss_pred EcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCCcEE-Ec
Q 000470 1290 NAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL-TG 1368 (1472)
Q Consensus 1290 Dl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~ll-Tg 1368 (1472)
|++..+.+.+|.... ...+|++++|+..|+|+ +|
T Consensus 257 DlRaD~~~a~ys~~~---------------------------------------------~~~gitSv~FS~SGRlLfag 291 (343)
T KOG0286|consen 257 DLRADQELAVYSHDS---------------------------------------------IICGITSVAFSKSGRLLFAG 291 (343)
T ss_pred eecCCcEEeeeccCc---------------------------------------------ccCCceeEEEcccccEEEee
Confidence 999988888876211 12379999999999555 88
Q ss_pred cCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeE
Q 000470 1369 GTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILS 1448 (1472)
Q Consensus 1369 g~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ 1448 (1472)
..|..+.+||.-.++...++.| |.+.|++
T Consensus 292 y~d~~c~vWDtlk~e~vg~L~G---------------------------------------------------HeNRvSc 320 (343)
T KOG0286|consen 292 YDDFTCNVWDTLKGERVGVLAG---------------------------------------------------HENRVSC 320 (343)
T ss_pred ecCCceeEeeccccceEEEeec---------------------------------------------------cCCeeEE
Confidence 8999999999887776655544 9999999
Q ss_pred EeeeecCCcEEEEEcCCceEEEcC
Q 000470 1449 LGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1449 va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+. .+++|-.|+|||+|-.+|||-
T Consensus 321 l~-~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 321 LG-VSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred EE-ECCCCcEEEecchhHheeecC
Confidence 96 899999999999999999994
No 18
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.4e-33 Score=305.96 Aligned_cols=195 Identities=21% Similarity=0.224 Sum_probs=167.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
||||||+.+|++|+....+.|||||.. |.|||||+.++.|++.|++.+++||..|+.|||+++++|||||.||||++.+
T Consensus 110 LNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N 189 (668)
T KOG0611|consen 110 LNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQN 189 (668)
T ss_pred cCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCC
Confidence 799999999999999999999999999 7999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+++||+|||++..+. ...++.|.||++.|.+||++.+.. .-++.+|.||||++||.|+.|..|
T Consensus 190 ~NiKIADFGLSNly~--------~~kfLqTFCGSPLYASPEIvNG~P---------Y~GPEVDsWsLGvLLYtLVyGtMP 252 (668)
T KOG0611|consen 190 NNIKIADFGLSNLYA--------DKKFLQTFCGSPLYASPEIVNGTP---------YKGPEVDSWSLGVLLYTLVYGTMP 252 (668)
T ss_pred CCeeeeccchhhhhc--------cccHHHHhcCCcccCCccccCCCC---------CCCCccchhhHHHHHHHHhhcccc
Confidence 999999999976542 123578999999999999875332 236889999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|++.+...+.+........-+.-+ ..+.-||+.||..||++|.|++++..|||
T Consensus 253 FDG~Dhk~lvrQIs~GaYrEP~~P-SdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 253 FDGRDHKRLVRQISRGAYREPETP-SDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred cCCchHHHHHHHhhcccccCCCCC-chHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 998776554433322211122223 36899999999999999999999999987
No 19
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-33 Score=296.98 Aligned_cols=191 Identities=20% Similarity=0.201 Sum_probs=167.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+.||++++++..+.+.+.+||||||++ |.|+.++++.+++++..+++++.||+.||+|||+++|++|||||||||+|+.
T Consensus 101 v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~ 180 (355)
T KOG0616|consen 101 VSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQN 180 (355)
T ss_pred ccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccC
Confidence 369999999999999999999999999 6999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||.+|.... ..-|.||||.|+|||++. ..+|+.++|.||||+++|||+.|.||
T Consensus 181 G~iKitDFGFAK~v~~----------rT~TlCGTPeYLAPEii~----------sk~ynkavDWWalGVLIYEMlaG~pP 240 (355)
T KOG0616|consen 181 GHIKITDFGFAKRVSG----------RTWTLCGTPEYLAPEIIQ----------SKGYNKAVDWWALGVLIYEMLAGYPP 240 (355)
T ss_pred CcEEEEeccceEEecC----------cEEEecCCccccChHHhh----------cCCCCcchhHHHHHHHHHHHHcCCCC
Confidence 9999999999997621 135789999999999875 45789999999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|-..+..++..........+|...+.++++||.++|+.|-.+|. ...++..|
T Consensus 241 F~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H 297 (355)
T KOG0616|consen 241 FYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNH 297 (355)
T ss_pred CcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccC
Confidence 97766555555455555557778889999999999999999994 34566666
No 20
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.98 E-value=7.2e-33 Score=288.83 Aligned_cols=193 Identities=23% Similarity=0.315 Sum_probs=166.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+||||+++++.+.++...|||+|+|.| +|..-|-.+-.+++..+-.++.||++||.|||.+||||||+||+|+|+.+.
T Consensus 67 LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK 146 (355)
T KOG0033|consen 67 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASK 146 (355)
T ss_pred cCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeec
Confidence 6899999999999999999999999995 898888777778999999999999999999999999999999999999765
Q ss_pred C---cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 80 N---WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 80 ~---~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
. -+||+|||+++... +. .......|+|.|||||++. ..+|+..+|||+.|+|||-|+.|
T Consensus 147 ~~~A~vKL~~FGvAi~l~---~g-----~~~~G~~GtP~fmaPEvvr----------kdpy~kpvDiW~cGViLfiLL~G 208 (355)
T KOG0033|consen 147 AKGAAVKLADFGLAIEVN---DG-----EAWHGFAGTPGYLSPEVLK----------KDPYSKPVDIWACGVILYILLVG 208 (355)
T ss_pred cCCCceeecccceEEEeC---Cc-----cccccccCCCcccCHHHhh----------cCCCCCcchhhhhhHHHHHHHhC
Confidence 3 49999999998764 11 1224566899999999765 55899999999999999999999
Q ss_pred CCCCCc-hH---HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFEL-SH---LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~-~~---~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+||.. ++ ++.++++.|+.....+...++++++||++||..||.+|+|+.|+|+|
T Consensus 209 ~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 209 YPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 988866 33 34566788886664555667889999999999999999999999998
No 21
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=2e-32 Score=313.29 Aligned_cols=196 Identities=25% Similarity=0.369 Sum_probs=161.2
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|+||||+++.++..+. ..+|||+|||+.||.-++... -.+++.+++.+++||+.||+|||.+||+|||||..||||+
T Consensus 173 l~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLid 252 (560)
T KOG0600|consen 173 LDHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILID 252 (560)
T ss_pred cCCCcccceeeEEEecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEc
Confidence 6899999999998776 699999999999999999874 4699999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.+|.+||+|||+|+.+......+ +...+-|++|+|||++++ ...|+.++|+||+|||++||++|+
T Consensus 253 n~G~LKiaDFGLAr~y~~~~~~~------~T~rVvTLWYRpPELLLG---------~t~Yg~aVDlWS~GCIl~El~~gk 317 (560)
T KOG0600|consen 253 NNGVLKIADFGLARFYTPSGSAP------YTSRVVTLWYRPPELLLG---------ATSYGTAVDLWSVGCILAELFLGK 317 (560)
T ss_pred CCCCEEeccccceeeccCCCCcc------cccceEEeeccChHHhcC---------CcccccceeehhhhHHHHHHHcCC
Confidence 99999999999998664332221 355667999999999874 347899999999999999999999
Q ss_pred CCCCchH----HHHHHhcCCCCCc------cc-------------------CCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 158 PFFELSH----LLAYRRGQYDPSQ------HL-------------------EKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 158 ~pf~~~~----~~~~~~~~~~~~~------~l-------------------~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
|.|.+.. +..+.+..-.|.. .+ ....+....+|+..||..||++|.||.++
T Consensus 318 PI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~a 397 (560)
T KOG0600|consen 318 PILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSA 397 (560)
T ss_pred CCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHH
Confidence 9997543 3332211111000 01 12335678899999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
|++
T Consensus 398 L~s 400 (560)
T KOG0600|consen 398 LQS 400 (560)
T ss_pred hcC
Confidence 998
No 22
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=5e-33 Score=309.01 Aligned_cols=197 Identities=20% Similarity=0.260 Sum_probs=162.5
Q ss_pred CCCCCcceeeEEEEe-----CCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQET-----DKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~-----~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++|+||+.+.+++.. -+.+|+|+|+|+.+|.+.|+.++.|++..++.+++||++||+|+|+.||+||||||.|+|
T Consensus 78 ~~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll 157 (359)
T KOG0660|consen 78 LRHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLL 157 (359)
T ss_pred hcCCCcceEEeecccccccccceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhhee
Confidence 579999999999965 357999999999999999999988999999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.+..+||+|||+|+..... ....++.....|.+|.|||++.. ...|+.++||||+|||++||++
T Consensus 158 ~n~~c~lKI~DFGLAR~~~~~-----~~~~~mTeYVaTRWYRAPElll~---------~~~Yt~aiDiWSvGCI~AEmL~ 223 (359)
T KOG0660|consen 158 LNADCDLKICDFGLARYLDKF-----FEDGFMTEYVATRWYRAPELLLN---------SSEYTKAIDIWSVGCILAEMLT 223 (359)
T ss_pred eccCCCEEeccccceeecccc-----CcccchhcceeeeeecCHHHHhc---------cccccchhhhhhhhHHHHHHHc
Confidence 999999999999999976432 11223344556889999998853 4579999999999999999999
Q ss_pred CCCCCCchHHH---------------------------HHHhcC-CCCCc---ccCCCCCHHHHHHHHHhcccCcCCCCC
Q 000470 156 EVPFFELSHLL---------------------------AYRRGQ-YDPSQ---HLEKIPDSGIRKMILHMIQLEPELRFS 204 (1472)
Q Consensus 156 g~~pf~~~~~~---------------------------~~~~~~-~~~~~---~l~~~~~~~l~~LI~~mL~~dP~~Rps 204 (1472)
|+|.|.+.+.. .|.+.. ..+.. .+-+..++.+.+|+.+||..||.+|+|
T Consensus 224 gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRit 303 (359)
T KOG0660|consen 224 GKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRIT 303 (359)
T ss_pred CCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCC
Confidence 99999654311 111111 11111 222355788999999999999999999
Q ss_pred HHHHHHH
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~elL~~ 211 (1472)
++|+|+|
T Consensus 304 a~eAL~h 310 (359)
T KOG0660|consen 304 AEEALAH 310 (359)
T ss_pred HHHHhcC
Confidence 9999998
No 23
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.98 E-value=7.7e-33 Score=317.38 Aligned_cols=194 Identities=19% Similarity=0.268 Sum_probs=176.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
|+||||+.++++||+.+++|+|.||+.|+|+.+|...+.++|+.++.+++|++.||.|||+.+|.|||+||.|||+...|
T Consensus 58 lkHpniv~m~esfEt~~~~~vVte~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~ 137 (808)
T KOG0597|consen 58 LKHPNIVEMLESFETSAHLWVVTEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGG 137 (808)
T ss_pred cCCcchhhHHHhhcccceEEEEehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+|+||||+++.... .........|||.|||||.+. +.+|+..+|+||||||+|||+.|+|||
T Consensus 138 ~~KlcdFg~Ar~m~~-------~t~vltsikGtPlYmAPElv~----------e~pyd~~sDlWslGcilYE~~~G~PPF 200 (808)
T KOG0597|consen 138 TLKLCDFGLARAMST-------NTSVLTSIKGTPLYMAPELVE----------EQPYDHTSDLWSLGCILYELYVGQPPF 200 (808)
T ss_pred ceeechhhhhhhccc-------CceeeeeccCcccccCHHHHc----------CCCccchhhHHHHHHHHHHHhcCCCCc
Confidence 999999999986532 344556778999999999764 568999999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
-...+..+.+........++...+..+++|+..+|.+||.+|.+..+++.|
T Consensus 201 ~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 201 YARSITQLVKSILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred hHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 888877776665554455566777899999999999999999999999998
No 24
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=4.9e-32 Score=305.62 Aligned_cols=200 Identities=21% Similarity=0.206 Sum_probs=164.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|+||||++++..|..++.+|+||+||. |++.+.++.. ..++|..+..|++++++||.|||.+|.||||||+.|||++
T Consensus 81 ~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~ 160 (516)
T KOG0582|consen 81 IDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILID 160 (516)
T ss_pred cCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEc
Confidence 689999999999999999999999999 8999999862 3499999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
++|.|||+|||.+.-..... ....+.|.+..|++||||||++. .+...|+.|+||||||++..||.+|.
T Consensus 161 ~dG~VkLadFgvsa~l~~~G---~R~~~rf~tfvgtp~wmAPEvl~--------q~~~GYdfKaDIwSfGITA~ELA~G~ 229 (516)
T KOG0582|consen 161 SDGTVKLADFGVSASLFDSG---DRQVTRFNTFVGTPCWMAPEVLM--------QQLHGYDFKADIWSFGITACELAHGH 229 (516)
T ss_pred CCCcEEEcCceeeeeecccC---ceeeEeeccccCcccccChHHhh--------hcccCccchhhhhhhhHHHHHHhcCC
Confidence 99999999999765554322 22233348889999999999975 33457999999999999999999999
Q ss_pred CCCCchH-HHHHHhcCCC--C-------CcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSH-LLAYRRGQYD--P-------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~-~~~~~~~~~~--~-------~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.||..-. +..+...... + ...-.+..+..++++|..||++||++||||+++|+|
T Consensus 230 aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 230 APFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred CCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 9996332 2222211111 1 111223446689999999999999999999999998
No 25
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.98 E-value=3.6e-32 Score=288.40 Aligned_cols=195 Identities=24% Similarity=0.300 Sum_probs=161.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+||||+.+.++|-....+-||+||++.+|+..|+.+ -.|+..++++++.|+++||+|||++.|+||||||.|+|++++
T Consensus 58 l~h~nIi~LiD~F~~~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~ 137 (318)
T KOG0659|consen 58 LKHPNIIELIDVFPHKSNLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSD 137 (318)
T ss_pred ccCcchhhhhhhccCCCceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCC
Confidence 6899999999999999999999999999999999875 459999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||+++....+.... ....-|.+|+|||.+.+. ..|+..+||||.|||++||+.|.|+
T Consensus 138 g~lKiADFGLAr~f~~p~~~~-------~~~V~TRWYRAPELLfGs---------r~Yg~~VDmWavGCI~AELllr~P~ 201 (318)
T KOG0659|consen 138 GQLKIADFGLARFFGSPNRIQ-------THQVVTRWYRAPELLFGS---------RQYGTGVDMWAVGCIFAELLLRVPF 201 (318)
T ss_pred CcEEeecccchhccCCCCccc-------ccceeeeeccChHHhccc---------hhcCCcchhhhHHHHHHHHHccCCC
Confidence 999999999999875443321 222568899999998743 4789999999999999999999999
Q ss_pred CCch----HHHHH---------------------HhcCCCCCc---ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELS----HLLAY---------------------RRGQYDPSQ---HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~----~~~~~---------------------~~~~~~~~~---~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.+. ++..+ .+..+.|.+ .+-...+.++.||+.+||.+||.+|+++.|+|+|
T Consensus 202 fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 202 FPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 9643 22222 111111111 1222335678999999999999999999999998
No 26
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.8e-32 Score=310.17 Aligned_cols=198 Identities=21% Similarity=0.199 Sum_probs=160.3
Q ss_pred CCCCCcceeeEEEEeCC--eEEEEecccC-CcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETDK--AAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~--~~~lV~Ey~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++|||||++++...... .++++|||+. |+|.+++...+ .|++..++.+..||++||.|||++||+||||||+|||+
T Consensus 71 l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl 150 (313)
T KOG0198|consen 71 LNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILL 150 (313)
T ss_pred CCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEE
Confidence 57999999999855544 6999999999 79999999866 79999999999999999999999999999999999999
Q ss_pred cc-CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 77 TS-WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 77 ~~-~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
+. ++.+||+|||+++..... ...........||+.|||||++.. +....+++||||+||++.||+|
T Consensus 151 ~~~~~~~KlaDFG~a~~~~~~----~~~~~~~~~~~Gtp~~maPEvi~~---------g~~~~~~sDiWSlGCtVvEM~T 217 (313)
T KOG0198|consen 151 DPSNGDVKLADFGLAKKLESK----GTKSDSELSVQGTPNYMAPEVIRN---------GEVARRESDIWSLGCTVVEMLT 217 (313)
T ss_pred eCCCCeEEeccCccccccccc----cccccccccccCCccccCchhhcC---------CCcCCccchhhhcCCEEEeccC
Confidence 99 699999999998765420 011111234568999999998753 1122368999999999999999
Q ss_pred CCCCCCch--HHH-HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELS--HLL-AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~--~~~-~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|++||..- ... .++.+.....+.++...++++++||.+|+.+||++||||+++|+|
T Consensus 218 g~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 218 GKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred CCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 99999751 111 122222223346777788999999999999999999999999998
No 27
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=1.5e-31 Score=297.15 Aligned_cols=258 Identities=18% Similarity=0.204 Sum_probs=226.2
Q ss_pred CCCCCcc-cccceeeeccccccceeEEEEcCC--CCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEe
Q 000470 1039 IPDSGWR-PRGILVAHLQEHCSAVNEIAISHD--HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMML 1115 (1472)
Q Consensus 1039 ~~~~~W~-p~G~lV~~l~~H~~~V~~lafspd--~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~ 1115 (1472)
.....|. |.+.++..|.||.+.|.++.|+|. +.-+||||.||+||+|++..-. ....+.+|..+|..++|+
T Consensus 197 G~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~------~l~~l~gH~~RVs~VafH 270 (459)
T KOG0272|consen 197 GLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET------PLQDLEGHLARVSRVAFH 270 (459)
T ss_pred CceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc------chhhhhcchhhheeeeec
Confidence 3457898 789999999999999999999996 5689999999999999998643 567788999999999999
Q ss_pred cCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCC
Q 000470 1116 RHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTR 1195 (1472)
Q Consensus 1116 ~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlr 1195 (1472)
|+|+.|++++.|.+-++||+.+.. ...+..+|...|..++|+++ |.++++|+.|..-++||+|
T Consensus 271 PsG~~L~TasfD~tWRlWD~~tk~--------------ElL~QEGHs~~v~~iaf~~D---GSL~~tGGlD~~~RvWDlR 333 (459)
T KOG0272|consen 271 PSGKFLGTASFDSTWRLWDLETKS--------------ELLLQEGHSKGVFSIAFQPD---GSLAATGGLDSLGRVWDLR 333 (459)
T ss_pred CCCceeeecccccchhhcccccch--------------hhHhhcccccccceeEecCC---CceeeccCccchhheeecc
Confidence 999999999999999999998521 12234467778999999999 7799999999999999999
Q ss_pred CCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCC
Q 000470 1196 SNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARP 1275 (1472)
Q Consensus 1196 t~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~ 1275 (1472)
+++++-.|.+ |.+.|.++.|+|+|..|+||++|+++++||||-..++..+.. |..-|..++| .|.. |.
T Consensus 334 tgr~im~L~g--H~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipA-H~nlVS~Vk~-~p~~--------g~ 401 (459)
T KOG0272|consen 334 TGRCIMFLAG--HIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPA-HSNLVSQVKY-SPQE--------GY 401 (459)
T ss_pred cCcEEEEecc--cccceeeEeECCCceEEeecCCCCcEEEeeecccccceeccc-ccchhhheEe-cccC--------Ce
Confidence 9999988877 999999999999999999999999999999998888776654 6778899998 7732 56
Q ss_pred EEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCce
Q 000470 1276 LIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIR 1355 (1472)
Q Consensus 1276 ~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~ 1355 (1472)
++++++.|+++++|...+++|.+.+. +|...|.
T Consensus 402 fL~TasyD~t~kiWs~~~~~~~ksLa-----------------------------------------------GHe~kV~ 434 (459)
T KOG0272|consen 402 FLVTASYDNTVKIWSTRTWSPLKSLA-----------------------------------------------GHEGKVI 434 (459)
T ss_pred EEEEcccCcceeeecCCCcccchhhc-----------------------------------------------CCccceE
Confidence 89999999999999999998877765 3444799
Q ss_pred EeccCCCC-cEEEccCCCeEEEEe
Q 000470 1356 SLLPLPGG-DLLTGGTDLKIRRWD 1378 (1472)
Q Consensus 1356 sl~~~p~g-~llTgg~Dg~IrlWD 1378 (1472)
++..++++ .++|++.|++|++|.
T Consensus 435 s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 435 SLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEEeccCCceEEEeccCceeeecc
Confidence 99999999 788999999999995
No 28
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.97 E-value=1.1e-31 Score=310.54 Aligned_cols=199 Identities=22% Similarity=0.257 Sum_probs=162.2
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
.+|.||++|..|++...+||||||++ |++..+|.+.+.|++.++++++.+++.|++.+|+.|+|||||||+|+||+..|
T Consensus 199 ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~G 278 (550)
T KOG0605|consen 199 DSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKG 278 (550)
T ss_pred CCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCC
Confidence 47999999999999999999999999 69999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCC-----------------CCCCCCCce-----------------------eeccCCCCccccCcc
Q 000470 81 WLYLSDFASFKPTYIP-----------------YDDPSDFSF-----------------------FFDTGGKRLCYLAPE 120 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~-----------------~~~~~~~~~-----------------------~~~~~~gt~~Y~APE 120 (1472)
++||+|||+++..... +..+.++.. +.....|||.|||||
T Consensus 279 HiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPE 358 (550)
T KOG0605|consen 279 HIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPE 358 (550)
T ss_pred CEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchH
Confidence 9999999998654321 111222221 112346899999999
Q ss_pred cccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHHHHhcCCCCC----cccCCCCCHHHHHHHHHhcc
Q 000470 121 RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPS----QHLEKIPDSGIRKMILHMIQ 196 (1472)
Q Consensus 121 ~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~----~~l~~~~~~~l~~LI~~mL~ 196 (1472)
+|. +..|+..+|+||||||+|||+.|.|||..+...+..+...... ..-....+++++|||.+||.
T Consensus 359 Vll----------~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~ 428 (550)
T KOG0605|consen 359 VLL----------GKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC 428 (550)
T ss_pred HHh----------cCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc
Confidence 987 3468899999999999999999999998776554333222211 11122345789999999999
Q ss_pred cCcCCCC---CHHHHHHH
Q 000470 197 LEPELRF---SAESYLQN 211 (1472)
Q Consensus 197 ~dP~~Rp---sa~elL~~ 211 (1472)
||++|. +++||-+|
T Consensus 429 -d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 429 -DPENRLGSKGAEEIKKH 445 (550)
T ss_pred -CHHHhcCcccHHHHhcC
Confidence 999999 48999988
No 29
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-31 Score=303.14 Aligned_cols=193 Identities=22% Similarity=0.230 Sum_probs=164.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE-cc
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV-TS 78 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv-~~ 78 (1472)
.|||||++|+++.+...+|||+|+-+ |+|+|||.+. ..+.+..+++++.||+.|+.|||+..+||||||||||.+ ..
T Consensus 75 QHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEK 154 (864)
T KOG4717|consen 75 QHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEK 154 (864)
T ss_pred cCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeee
Confidence 69999999999999999999999999 6999999764 459999999999999999999999999999999999876 45
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
-|-|||+|||++..+. | ...+.+.||++.|-|||++.+..++ .+++||||||+|||.|++|++
T Consensus 155 lGlVKLTDFGFSNkf~-P-------G~kL~TsCGSLAYSAPEILLGDsYD---------APAVDiWSLGVILyMLVCGq~ 217 (864)
T KOG4717|consen 155 LGLVKLTDFGFSNKFQ-P-------GKKLTTSCGSLAYSAPEILLGDSYD---------APAVDIWSLGVILYMLVCGQP 217 (864)
T ss_pred cCceEeeeccccccCC-C-------cchhhcccchhhccCchhhhcCccC---------CcchhhhHHHHHHHHHHhCCC
Confidence 6999999999876542 2 2235789999999999999865544 578999999999999999999
Q ss_pred CCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||+..+--+......+.....|...+.++++||..||++||++|.+.+|+..+
T Consensus 218 PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 218 PFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred ccccccchhhhhhhhcccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 99754433332333333444667778899999999999999999999999987
No 30
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=312.78 Aligned_cols=193 Identities=20% Similarity=0.218 Sum_probs=165.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+.|+|||.|++.|..+..+|+||||++ |+|-|.+.... ++|.++..|+++++.||+|||.+||+|||||.+|||++.+
T Consensus 327 ~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~~-~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~ 405 (550)
T KOG0578|consen 327 LHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKTR-MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMD 405 (550)
T ss_pred ccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhccc-ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccC
Confidence 479999999999999999999999999 69999887654 9999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||++..+..... --.+..||++|||||+.. ...|++++||||||+++.||+-|+||
T Consensus 406 g~vKltDFGFcaqi~~~~~-------KR~TmVGTPYWMAPEVvt----------rk~YG~KVDIWSLGIMaIEMveGEPP 468 (550)
T KOG0578|consen 406 GSVKLTDFGFCAQISEEQS-------KRSTMVGTPYWMAPEVVT----------RKPYGPKVDIWSLGIMAIEMVEGEPP 468 (550)
T ss_pred CcEEEeeeeeeeccccccC-------ccccccCCCCccchhhhh----------hcccCccccchhhhhHHHHHhcCCCC
Confidence 9999999999876643322 225678999999999764 55899999999999999999999888
Q ss_pred CC-chHHHHHHhcC--CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FE-LSHLLAYRRGQ--YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~-~~~~~~~~~~~--~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|- ...+..+.... ..+....+...++.+++|+.+||+.||++|++|.|+|+|
T Consensus 469 YlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 469 YLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred ccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 75 44454444332 334444566778999999999999999999999999998
No 31
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=287.88 Aligned_cols=192 Identities=24% Similarity=0.234 Sum_probs=164.1
Q ss_pred CCCCcceeeEEEEe----CCeEEEEecccC-CcHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 2 SSTPCVHKKFWQET----DKAAYLLRQYFF-NSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~----~~~~~lV~Ey~~-gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
+|||||.++++|+. .+.+.+|||.|+ |.|+.+|..++. ++|.++..|+.||..|+.|||+.+|.||||||||+
T Consensus 113 ~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENL 192 (400)
T KOG0604|consen 113 GHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENL 192 (400)
T ss_pred CCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhhe
Confidence 69999999999975 357889999999 699999998765 99999999999999999999999999999999999
Q ss_pred EEccCC---cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 75 LVTSWN---WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 75 Lv~~~~---~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
|.+..+ .+||+|||++|.... ...+.+.|-|+.|.|||++- ..+|+..+|+||+|+++|
T Consensus 193 Lyt~t~~na~lKLtDfGFAK~t~~--------~~~L~TPc~TPyYvaPevlg----------~eKydkscdmwSlgVimY 254 (400)
T KOG0604|consen 193 LYTTTSPNAPLKLTDFGFAKETQE--------PGDLMTPCFTPYYVAPEVLG----------PEKYDKSCDMWSLGVIMY 254 (400)
T ss_pred eeecCCCCcceEecccccccccCC--------CccccCCcccccccCHHHhC----------chhcCCCCCccchhHHHH
Confidence 997653 699999999997632 22356788899999999764 346899999999999999
Q ss_pred HHHhCCCCCCchH--------HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 152 ELFLEVPFFELSH--------LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 152 eLltg~~pf~~~~--------~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
-|++|.|||-... ...++.+.|.....-+.-.++..+++|+++|..+|.+|.|++|+++|
T Consensus 255 IlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 255 ILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred HhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 9999999994321 23466777875554445567899999999999999999999999998
No 32
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.97 E-value=2.9e-31 Score=288.99 Aligned_cols=195 Identities=23% Similarity=0.304 Sum_probs=159.2
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
+.|||||.+.++.... +.+|||||||+.+|...+.+-+ .+...+++.++.|+++||+|||.+.|+||||||+|+|++
T Consensus 132 ~~H~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~ 211 (419)
T KOG0663|consen 132 ARHPNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS 211 (419)
T ss_pred cCCCCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec
Confidence 5799999999998754 4799999999999999998744 699999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
..|.+||+|||+|+.+..|... +....-|.+|+|||.+.+. ..|+.++|+||+|||++||++++
T Consensus 212 ~~G~lKiaDFGLAR~ygsp~k~-------~T~lVVTLWYRaPELLLG~---------~tyst~iDMWSvGCI~aE~l~~k 275 (419)
T KOG0663|consen 212 HKGILKIADFGLAREYGSPLKP-------YTPLVVTLWYRAPELLLGA---------KTYSTAVDMWSVGCIFAELLTQK 275 (419)
T ss_pred cCCcEEecccchhhhhcCCccc-------CcceEEEeeecCHHHhcCC---------cccCcchhhhhHHHHHHHHHhcC
Confidence 9999999999999988665332 2344568999999998743 46899999999999999999999
Q ss_pred CCCCch----HHHHHHhcCCCC-----------------------C----cccCCC-CCHHHHHHHHHhcccCcCCCCCH
Q 000470 158 PFFELS----HLLAYRRGQYDP-----------------------S----QHLEKI-PDSGIRKMILHMIQLEPELRFSA 205 (1472)
Q Consensus 158 ~pf~~~----~~~~~~~~~~~~-----------------------~----~~l~~~-~~~~l~~LI~~mL~~dP~~Rpsa 205 (1472)
|.|.+. ++.++.+..-.| . ..+... .++...+|+..+|.+||.+|.||
T Consensus 276 Plf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA 355 (419)
T KOG0663|consen 276 PLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITA 355 (419)
T ss_pred CCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccH
Confidence 999653 332221110000 0 001111 34677899999999999999999
Q ss_pred HHHHHH
Q 000470 206 ESYLQN 211 (1472)
Q Consensus 206 ~elL~~ 211 (1472)
+|+|+|
T Consensus 356 ~~~L~h 361 (419)
T KOG0663|consen 356 EDGLKH 361 (419)
T ss_pred HHhhcc
Confidence 999999
No 33
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.97 E-value=7.3e-32 Score=300.27 Aligned_cols=194 Identities=26% Similarity=0.385 Sum_probs=156.5
Q ss_pred CCCCCcceeeEEEEeC--C---eEEEEecccCCcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000470 1 MSSTPCVHKKFWQETD--K---AAYLLRQYFFNSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~---~~~lV~Ey~~gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKp 71 (1472)
+.|||||++..+|... . ...+|||||+.+|+++++. +..++..+++.+.+||++||.|||+.|||||||||
T Consensus 74 l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKP 153 (364)
T KOG0658|consen 74 LDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKP 153 (364)
T ss_pred cCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCCh
Confidence 5899999998888543 2 4567999999999999984 56799999999999999999999999999999999
Q ss_pred CCEEEccC-CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 72 ENVLVTSW-NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 72 eNILv~~~-~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
+|+|++.+ |.+||||||+||.....+.+ .++. .++.|+|||.+.+. ..|+.+.||||+|||+
T Consensus 154 qNlLvD~~tg~LKicDFGSAK~L~~~epn---iSYi-----cSRyYRaPELifga---------~~Yt~~IDiWSaGCV~ 216 (364)
T KOG0658|consen 154 QNLLVDPDTGVLKICDFGSAKVLVKGEPN---ISYI-----CSRYYRAPELIFGA---------TEYTTSIDIWSAGCVM 216 (364)
T ss_pred heEEEcCCCCeEEeccCCcceeeccCCCc---eeEE-----EeccccCHHHHcCc---------cccCceeEEhhhhHHH
Confidence 99999977 89999999999987544433 2322 26779999998743 4789999999999999
Q ss_pred HHHHhCCCCCCchH----HHHHHh--------------cCC-----C---CC---cccCCCCCHHHHHHHHHhcccCcCC
Q 000470 151 AELFLEVPFFELSH----LLAYRR--------------GQY-----D---PS---QHLEKIPDSGIRKMILHMIQLEPEL 201 (1472)
Q Consensus 151 ~eLltg~~pf~~~~----~~~~~~--------------~~~-----~---~~---~~l~~~~~~~l~~LI~~mL~~dP~~ 201 (1472)
+||+.|+|.|.+.. +..+.+ ..+ . .. ..+....++++.+|+.++|+++|.+
T Consensus 217 aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~ 296 (364)
T KOG0658|consen 217 AELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSK 296 (364)
T ss_pred HHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhh
Confidence 99999999997542 222211 110 0 00 0133455788999999999999999
Q ss_pred CCCHHHHHHH
Q 000470 202 RFSAESYLQN 211 (1472)
Q Consensus 202 Rpsa~elL~~ 211 (1472)
|.++.|++.|
T Consensus 297 R~~~~~~l~h 306 (364)
T KOG0658|consen 297 RLSALEALAH 306 (364)
T ss_pred cCCHHHHhcc
Confidence 9999999988
No 34
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=1.2e-29 Score=277.16 Aligned_cols=307 Identities=19% Similarity=0.259 Sum_probs=261.4
Q ss_pred CCCcccccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCE
Q 000470 1041 DSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1120 (1472)
Q Consensus 1041 ~~~W~p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~ 1120 (1472)
+..|-|+-.++..+.+|+.+|+++-|+|+-..+|+||+|+++++||..+++. .....+|...+.++.|...|..
T Consensus 91 ~~~wipRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~------e~~LrGHt~sv~di~~~a~Gk~ 164 (406)
T KOG0295|consen 91 PALWIPRPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGEL------ERSLRGHTDSVFDISFDASGKY 164 (406)
T ss_pred hhhcCCCCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhh------hhhhhccccceeEEEEecCccE
Confidence 5679998889999999999999999999999999999999999999998873 4456688888999999999999
Q ss_pred EEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCcc
Q 000470 1121 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1200 (1472)
Q Consensus 1121 las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~ 1200 (1472)
+|+|+.|-.+++||.+.. -.+++....+...|.++.|-|. |.++++++.|.+|+.||+.++-++
T Consensus 165 l~tcSsDl~~~LWd~~~~-------------~~c~ks~~gh~h~vS~V~f~P~---gd~ilS~srD~tik~We~~tg~cv 228 (406)
T KOG0295|consen 165 LATCSSDLSAKLWDFDTF-------------FRCIKSLIGHEHGVSSVFFLPL---GDHILSCSRDNTIKAWECDTGYCV 228 (406)
T ss_pred EEecCCccchhheeHHHH-------------HHHHHHhcCcccceeeEEEEec---CCeeeecccccceeEEecccceeE
Confidence 999999999999999831 1223344567778899999998 679999999999999999999999
Q ss_pred ceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccc------cCCC
Q 000470 1201 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVS------TTAR 1274 (1472)
Q Consensus 1201 ~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~------~~~~ 1274 (1472)
.++.. |...|..+....||..+++|+.|.+|++|-+.++.+...++. |.-+|.++.| .|....... ...+
T Consensus 229 ~t~~~--h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~-hEh~vEci~w-ap~~~~~~i~~at~~~~~~ 304 (406)
T KOG0295|consen 229 KTFPG--HSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELRE-HEHPVECIAW-APESSYPSISEATGSTNGG 304 (406)
T ss_pred EeccC--chHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhc-cccceEEEEe-cccccCcchhhccCCCCCc
Confidence 99987 778999999999999999999999999999999977666654 5668999988 665432111 1234
Q ss_pred CEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCc
Q 000470 1275 PLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1354 (1472)
Q Consensus 1275 ~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1354 (1472)
..+.+++-|+.|++||+.+|.|+.++.. |..+|
T Consensus 305 ~~l~s~SrDktIk~wdv~tg~cL~tL~g-----------------------------------------------hdnwV 337 (406)
T KOG0295|consen 305 QVLGSGSRDKTIKIWDVSTGMCLFTLVG-----------------------------------------------HDNWV 337 (406)
T ss_pred cEEEeecccceEEEEeccCCeEEEEEec-----------------------------------------------cccee
Confidence 5888999999999999999999988863 44489
Q ss_pred eEeccCCCC-cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhh
Q 000470 1355 RSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAA 1433 (1472)
Q Consensus 1355 ~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 1433 (1472)
+.++|+|+| +|+++.+|+++|+||+++..+..++.
T Consensus 338 r~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~-------------------------------------------- 373 (406)
T KOG0295|consen 338 RGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLE-------------------------------------------- 373 (406)
T ss_pred eeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccC--------------------------------------------
Confidence 999999999 77899999999999999876644332
Q ss_pred hhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1434 AATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1434 ~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.|...|++++ |+.+..|++||+-|..+|||.
T Consensus 374 -------ah~hfvt~lD-fh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 374 -------AHEHFVTSLD-FHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred -------CCcceeEEEe-cCCCCceEEeccccceeeeee
Confidence 2888899994 999999999999999999994
No 35
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.97 E-value=1.8e-29 Score=274.25 Aligned_cols=305 Identities=20% Similarity=0.295 Sum_probs=246.4
Q ss_pred CCCCcccccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC
Q 000470 1040 PDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1040 ~~~~W~p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~ 1119 (1472)
+.+-|...=++-+.+.+|-+.|.+++|.|.+++|+|||.|++++|||+.++. -.++..+|...|..+++++-..
T Consensus 133 ~rPeWHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~------LkltltGhi~~vr~vavS~rHp 206 (460)
T KOG0285|consen 133 PRPEWHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ------LKLTLTGHIETVRGVAVSKRHP 206 (460)
T ss_pred CCccccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCe------EEEeecchhheeeeeeecccCc
Confidence 3456777677889999999999999999999999999999999999999876 6678889999999999999999
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~ 1199 (1472)
++++|+.|+.|+-||++..+ -+|.| ..|=..|.+++.+|. -..|++|+.|.++++||+|+...
T Consensus 207 YlFs~gedk~VKCwDLe~nk-------------vIR~Y-hGHlS~V~~L~lhPT---ldvl~t~grDst~RvWDiRtr~~ 269 (460)
T KOG0285|consen 207 YLFSAGEDKQVKCWDLEYNK-------------VIRHY-HGHLSGVYCLDLHPT---LDVLVTGGRDSTIRVWDIRTRAS 269 (460)
T ss_pred eEEEecCCCeeEEEechhhh-------------hHHHh-ccccceeEEEecccc---ceeEEecCCcceEEEeeecccce
Confidence 99999999999999998411 22222 234457888999987 56999999999999999999999
Q ss_pred cceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEE
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1279 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~v 1279 (1472)
+.++.+ |..+|.++.+.|-...+++|+.|++|++||+|.++-.....+ |...+.+++. +|... .++
T Consensus 270 V~~l~G--H~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~-hkksvral~l-hP~e~----------~fA 335 (460)
T KOG0285|consen 270 VHVLSG--HTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTH-HKKSVRALCL-HPKEN----------LFA 335 (460)
T ss_pred EEEecC--CCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeec-ccceeeEEec-CCchh----------hhh
Confidence 999987 999999999999888999999999999999999998888776 5667889988 88764 344
Q ss_pred EEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEecc
Q 000470 1280 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1359 (1472)
Q Consensus 1280 as~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1359 (1472)
.++.+.|.-|++..|...+-+. +|..-|+++..
T Consensus 336 Sas~dnik~w~~p~g~f~~nls-----------------------------------------------gh~~iintl~~ 368 (460)
T KOG0285|consen 336 SASPDNIKQWKLPEGEFLQNLS-----------------------------------------------GHNAIINTLSV 368 (460)
T ss_pred ccCCccceeccCCccchhhccc-----------------------------------------------cccceeeeeee
Confidence 4445569999998876544332 34446889999
Q ss_pred CCCCcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCC
Q 000470 1360 LPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSA 1439 (1472)
Q Consensus 1360 ~p~g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1439 (1472)
..+|.+++||+.|.+.+||.+++-+-+-..... +...+
T Consensus 369 nsD~v~~~G~dng~~~fwdwksg~nyQ~~~t~v------------------------------------------qpGSl 406 (460)
T KOG0285|consen 369 NSDGVLVSGGDNGSIMFWDWKSGHNYQRGQTIV------------------------------------------QPGSL 406 (460)
T ss_pred ccCceEEEcCCceEEEEEecCcCcccccccccc------------------------------------------cCCcc
Confidence 899999999999999999998764322111000 00000
Q ss_pred CCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1440 GCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1440 ~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
. -...|++. +|...|..|+||..|.+|++||
T Consensus 407 ~-sEagI~as-~fDktg~rlit~eadKtIk~~k 437 (460)
T KOG0285|consen 407 E-SEAGIFAS-CFDKTGSRLITGEADKTIKMYK 437 (460)
T ss_pred c-cccceeEE-eecccCceEEeccCCcceEEEe
Confidence 0 23457777 4888899999999999999997
No 36
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-29 Score=267.05 Aligned_cols=262 Identities=22% Similarity=0.348 Sum_probs=216.3
Q ss_pred cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEe
Q 000470 1046 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1125 (1472)
Q Consensus 1046 p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s 1125 (1472)
..|..+..|.||...|+.++.++||+|++|||.||++++||+.+++ +.+.+.+|...|++++|+++.+.+++|+
T Consensus 51 ~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~------~t~~f~GH~~dVlsva~s~dn~qivSGS 124 (315)
T KOG0279|consen 51 KYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGE------STRRFVGHTKDVLSVAFSTDNRQIVSGS 124 (315)
T ss_pred ccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCc------EEEEEEecCCceEEEEecCCCceeecCC
Confidence 3588999999999999999999999999999999999999999886 6778999999999999999999999999
Q ss_pred CCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeec
Q 000470 1126 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1205 (1472)
Q Consensus 1126 ~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~ 1205 (1472)
.|.+|++|++-... ........+...|.++.|+|+. +..+++.+++|++|++||+++.+....+.+
T Consensus 125 rDkTiklwnt~g~c-------------k~t~~~~~~~~WVscvrfsP~~-~~p~Ivs~s~DktvKvWnl~~~~l~~~~~g 190 (315)
T KOG0279|consen 125 RDKTIKLWNTLGVC-------------KYTIHEDSHREWVSCVRFSPNE-SNPIIVSASWDKTVKVWNLRNCQLRTTFIG 190 (315)
T ss_pred CcceeeeeeecccE-------------EEEEecCCCcCcEEEEEEcCCC-CCcEEEEccCCceEEEEccCCcchhhcccc
Confidence 99999999986210 1111122236799999999984 246999999999999999999888887766
Q ss_pred CCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000470 1206 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1285 (1472)
Q Consensus 1206 ~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~ 1285 (1472)
|.+.++.++++|||...++|+.||.+.|||++.++.+.++. +...|.+++| +|.. ++++.+.+. .
T Consensus 191 --h~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~--a~~~v~sl~f-spnr---------ywL~~at~~-s 255 (315)
T KOG0279|consen 191 --HSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE--AFDIVNSLCF-SPNR---------YWLCAATAT-S 255 (315)
T ss_pred --ccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc--CCCeEeeEEe-cCCc---------eeEeeccCC-c
Confidence 99999999999999999999999999999999999876655 4568999999 7754 355555544 4
Q ss_pred EEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-c
Q 000470 1286 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-D 1364 (1472)
Q Consensus 1286 V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~ 1364 (1472)
|+|||++++.++..++...... ......+...+++|+++| .
T Consensus 256 IkIwdl~~~~~v~~l~~d~~g~--------------------------------------s~~~~~~~clslaws~dG~t 297 (315)
T KOG0279|consen 256 IKIWDLESKAVVEELKLDGIGP--------------------------------------SSKAGDPICLSLAWSADGQT 297 (315)
T ss_pred eEEEeccchhhhhhcccccccc--------------------------------------ccccCCcEEEEEEEcCCCcE
Confidence 9999999999888776322100 001112245678899999 7
Q ss_pred EEEccCCCeEEEEeCC
Q 000470 1365 LLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1365 llTgg~Dg~IrlWDl~ 1380 (1472)
|++|-.|+.||+|.+.
T Consensus 298 Lf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 298 LFAGYTDNVIRVWQVA 313 (315)
T ss_pred EEeeecCCcEEEEEee
Confidence 8899999999999864
No 37
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.97 E-value=1.5e-30 Score=291.20 Aligned_cols=195 Identities=27% Similarity=0.378 Sum_probs=160.1
Q ss_pred CCCCC-cceeeEEEEeCC------eEEEEecccCCcHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 000470 1 MSSTP-CVHKKFWQETDK------AAYLLRQYFFNSLRDRLSTPP----FLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~HpN-Iv~~~~~~~~~~------~~~lV~Ey~~gsL~d~l~~~~----~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DL 69 (1472)
|+|+| |+.+++++.+++ .+|+|+||++.+|.+++...+ .++...++.+++||+.||+|||++||+||||
T Consensus 67 L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDL 146 (323)
T KOG0594|consen 67 LSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDL 146 (323)
T ss_pred hCCCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccC
Confidence 68999 999999999887 899999999999999998755 4888899999999999999999999999999
Q ss_pred CCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
||+|||+++.|.+||+|||+++....|... +....+|.+|.|||++.+. ..|+..+||||+|||
T Consensus 147 KPQNlLi~~~G~lKlaDFGlAra~~ip~~~-------yt~evvTlWYRaPEvLlGs---------~~Ys~~vDiWs~GcI 210 (323)
T KOG0594|consen 147 KPQNLLISSSGVLKLADFGLARAFSIPMRT-------YTPEVVTLWYRAPEVLLGS---------TSYSTSVDIWSLGCI 210 (323)
T ss_pred CcceEEECCCCcEeeeccchHHHhcCCccc-------ccccEEEeeccCHHHhcCC---------CcCCCCcchHhHHHH
Confidence 999999999999999999999977655432 3556679999999998743 358999999999999
Q ss_pred HHHHHhCCCCCCchH----HHHHHhcC----------------CCC-------Cccc---CCCCCHHHHHHHHHhcccCc
Q 000470 150 IAELFLEVPFFELSH----LLAYRRGQ----------------YDP-------SQHL---EKIPDSGIRKMILHMIQLEP 199 (1472)
Q Consensus 150 l~eLltg~~pf~~~~----~~~~~~~~----------------~~~-------~~~l---~~~~~~~l~~LI~~mL~~dP 199 (1472)
++||+++++.|.+.. +..+.+.. +.. ...+ .+..+++..+++.+||+.+|
T Consensus 211 faEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p 290 (323)
T KOG0594|consen 211 FAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDP 290 (323)
T ss_pred HHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCc
Confidence 999999999996542 22221111 110 0000 01113578999999999999
Q ss_pred CCCCCHHHHHHH
Q 000470 200 ELRFSAESYLQN 211 (1472)
Q Consensus 200 ~~Rpsa~elL~~ 211 (1472)
.+|.||+.+|+|
T Consensus 291 ~~R~Sa~~al~h 302 (323)
T KOG0594|consen 291 AKRISAKGALTH 302 (323)
T ss_pred ccCcCHHHHhcC
Confidence 999999999998
No 38
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1e-30 Score=296.26 Aligned_cols=205 Identities=17% Similarity=0.142 Sum_probs=160.7
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|.|||||+++++..+. ..+|||+|||. |.+...=...+-|++.+++.|+..++.||+|||.+||+||||||.|+|++
T Consensus 165 l~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~ 244 (576)
T KOG0585|consen 165 LHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLS 244 (576)
T ss_pred cCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEc
Confidence 6799999999999874 58999999999 66554333344499999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
++|+|||+|||.+...... ........+....|||.|+|||.+.... .....+.+.||||+|++||.|+.|+
T Consensus 245 ~~g~VKIsDFGVs~~~~~~--~~~~~d~~L~~tvGTPAF~APE~c~~~~------~~~~~g~a~DiWalGVTLYCllfG~ 316 (576)
T KOG0585|consen 245 SDGTVKISDFGVSNEFPQG--SDEGSDDQLSRTVGTPAFFAPELCSGGN------SFSYSGFALDIWALGVTLYCLLFGQ 316 (576)
T ss_pred CCCcEEeeccceeeecccC--CccccHHHHhhcCCCccccchHhhcCCC------CccccchhhhhhhhhhhHHHhhhcc
Confidence 9999999999987655332 1122233344577999999999876321 1234577999999999999999997
Q ss_pred CCCCchHHHHHHhcCCCCCcccCC--CCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLLAYRRGQYDPSQHLEK--IPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~~~~~~~l~~--~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.||..+...+...........++. ...+.+++||.+||++||++|++..++..|.+
T Consensus 317 ~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 317 LPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred CCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 777665555444333332222333 34678999999999999999999999998844
No 39
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.97 E-value=4.8e-30 Score=302.22 Aligned_cols=197 Identities=18% Similarity=0.177 Sum_probs=164.8
Q ss_pred CCCCCcceeeEEEEeCC-eEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDK-AAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKG-ICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~-~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~g-IvH~DLKpeNIL 75 (1472)
|+|||||+|++++.... ..++||||++ |+|++++.. +..++...+..++.||++||+|||+++ ||||||||+|||
T Consensus 96 l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiL 175 (362)
T KOG0192|consen 96 LRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNIL 175 (362)
T ss_pred CCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEE
Confidence 68999999999999887 7999999999 799999987 567999999999999999999999999 999999999999
Q ss_pred EccCC-cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 76 VTSWN-WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 76 v~~~~-~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
++..+ ++||+|||+++...... .......||..|||||++... ...|+.++||||||+++|||+
T Consensus 176 v~~~~~~~KI~DFGlsr~~~~~~-------~~~~~~~GT~~wMAPEv~~~~--------~~~~~~K~DvySFgIvlWEl~ 240 (362)
T KOG0192|consen 176 VDLKGKTLKIADFGLSREKVISK-------TSMTSVAGTYRWMAPEVLRGE--------KSPYTEKSDVYSFGIVLWELL 240 (362)
T ss_pred EcCCCCEEEECCCccceeecccc-------ccccCCCCCccccChhhhcCC--------CCcCCccchhhhHHHHHHHHH
Confidence 99998 99999999997653221 111235789999999988622 347999999999999999999
Q ss_pred hCCCCCCchHHHH--HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 155 LEVPFFELSHLLA--YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 155 tg~~pf~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
||+.||....... +........+.++...++.+..|+.+||..||++||++.+++..+
T Consensus 241 t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l 300 (362)
T KOG0192|consen 241 TGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRL 300 (362)
T ss_pred HCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHH
Confidence 9998886544222 222223334445665788999999999999999999999999874
No 40
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.97 E-value=2.2e-30 Score=307.85 Aligned_cols=194 Identities=16% Similarity=0.163 Sum_probs=162.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+||||++ |+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 52 l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~ 131 (323)
T cd05571 52 TRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKD 131 (323)
T ss_pred CCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC
Confidence 579999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....... ......|++.|+|||.+. +..++.++||||+||++|||++|.+|
T Consensus 132 ~~~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~il~elltg~~P 194 (323)
T cd05571 132 GHIKITDFGLCKEGISDGA-------TMKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLP 194 (323)
T ss_pred CCEEEeeCCCCcccccCCC-------cccceecCccccChhhhc----------CCCCCccccCcccchhhhhhhcCCCC
Confidence 9999999999875321111 123446889999999774 34678899999999999999999988
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|...+..............++...++.+++||.+||+.||++|| ++.++++|
T Consensus 195 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 195 FYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 86554433322222222334556678999999999999999999 89999998
No 41
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.1e-30 Score=273.50 Aligned_cols=194 Identities=20% Similarity=0.179 Sum_probs=165.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLS--TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~--~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|+||||+++|++|.++...||++||.. |+|+..|. ....+++.....+++|++.||.|||.++|+||||||||+|++
T Consensus 79 L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg 158 (281)
T KOG0580|consen 79 LRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLG 158 (281)
T ss_pred cCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccC
Confidence 689999999999999999999999999 89999998 456699999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
..|.+||+|||.+..... .--.+.|||..|++||... +..++..+|+|++|++.||++.|.
T Consensus 159 ~~~~lkiAdfGwsV~~p~---------~kR~tlcgt~dyl~pEmv~----------~~~hd~~Vd~w~lgvl~yeflvg~ 219 (281)
T KOG0580|consen 159 SAGELKIADFGWSVHAPS---------NKRKTLCGTLDYLPPEMVE----------GRGHDKFVDLWSLGVLCYEFLVGL 219 (281)
T ss_pred CCCCeeccCCCceeecCC---------CCceeeecccccCCHhhcC----------CCCccchhhHHHHHHHHHHHHhcC
Confidence 999999999998764311 1125778999999999654 557789999999999999999999
Q ss_pred CCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|||......+..+.........+...+..++|||.+||.++|.+|....|+++|++
T Consensus 220 ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw 275 (281)
T KOG0580|consen 220 PPFESQSHSETYKRIRKVDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPW 275 (281)
T ss_pred CchhhhhhHHHHHHHHHccccCCcccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence 99976553332222222223345667789999999999999999999999999954
No 42
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=4e-30 Score=295.96 Aligned_cols=204 Identities=22% Similarity=0.294 Sum_probs=166.9
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~-l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+|.+|+++++|-.+++.+||||||-+.+|...|+++.. ++.-.++.+.+|+|.|+.++|.+||||.||||.|+|+-. |
T Consensus 418 g~~~IIqL~DYEv~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-G 496 (677)
T KOG0596|consen 418 GHDKIIQLYDYEVTDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-G 496 (677)
T ss_pred CCceEEEEeeeeccCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-e
Confidence 57899999999999999999999999999999998754 344589999999999999999999999999999999976 9
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccc-cccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQ-VAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~-~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
.+||+|||+|+.+ .+...+.+-++.+||+.||+||.+........ -...-+++.++||||||||||+|+.|++|
T Consensus 497 ~LKLIDFGIA~aI-----~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktP 571 (677)
T KOG0596|consen 497 RLKLIDFGIANAI-----QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTP 571 (677)
T ss_pred eEEeeeechhccc-----CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCc
Confidence 9999999999876 33445667788999999999999975433200 01233578999999999999999999999
Q ss_pred CCchH-HHHHHhcCCCC--CcccCCCCCHH-HHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH-LLAYRRGQYDP--SQHLEKIPDSG-IRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~-~~~~~~~~~~~--~~~l~~~~~~~-l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|..-. ...-.....+| ..+++.+.+.. +.+++..||.+||++||++.|+|+|
T Consensus 572 f~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 572 FGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred hHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 96432 22222333333 33566666554 9999999999999999999999998
No 43
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.96 E-value=7.8e-30 Score=301.69 Aligned_cols=194 Identities=20% Similarity=0.258 Sum_probs=163.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 50 l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~ 129 (312)
T cd05585 50 VNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQ 129 (312)
T ss_pred CCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCC
Confidence 589999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||+++....... ......|++.|+|||.+. +..++.++||||+||++|||++|.+|
T Consensus 130 ~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslGvil~el~tg~~p 192 (312)
T cd05585 130 GHIALCDFGLCKLNMKDDD-------KTNTFCGTPEYLAPELLL----------GHGYTKAVDWWTLGVLLYEMLTGLPP 192 (312)
T ss_pred CcEEEEECcccccCccCCC-------ccccccCCcccCCHHHHc----------CCCCCCccceechhHHHHHHHhCCCC
Confidence 9999999999874321111 123456889999999875 34678899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC---CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF---SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp---sa~elL~~ 211 (1472)
|.........+........++...++.+++||.+||..||++|| ++.|+++|
T Consensus 193 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 193 FYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred cCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 97655444333333333345566778999999999999999997 58999988
No 44
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5e-30 Score=304.36 Aligned_cols=192 Identities=17% Similarity=0.211 Sum_probs=167.7
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||.++.++..|++..++|+||||+. |++... .....+++..++.|+..|+.||+|||++|||+||||.+|||+|.+|
T Consensus 427 ~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~-~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG 505 (694)
T KOG0694|consen 427 RHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHH-IHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG 505 (694)
T ss_pred cCCeEeecccccccCCeEEEEEEecCCCcEEEE-EecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC
Confidence 59999999999999999999999999 574443 3445699999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
++||+|||++|.....++ ...|.|||+.|||||++. +..|+.++|.||||++||||+.|++||
T Consensus 506 h~kiADFGlcKe~m~~g~-------~TsTfCGTpey~aPEil~----------e~~Yt~aVDWW~lGVLlyeML~Gq~PF 568 (694)
T KOG0694|consen 506 HVKIADFGLCKEGMGQGD-------RTSTFCGTPEFLAPEVLT----------EQSYTRAVDWWGLGVLLYEMLVGESPF 568 (694)
T ss_pred cEEecccccccccCCCCC-------ccccccCChhhcChhhhc----------cCcccchhhHHHHHHHHHHHHcCCCCC
Confidence 999999999986543322 246889999999999875 558999999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
.+++..+.-..........|...+.++.++++++|.+||++|.. ++++.+|
T Consensus 569 ~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 569 PGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred CCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence 98877776666666566677788899999999999999999994 5777777
No 45
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.96 E-value=5.8e-30 Score=299.69 Aligned_cols=191 Identities=20% Similarity=0.201 Sum_probs=161.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||+. |+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 58 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~ 137 (291)
T cd05612 58 VSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKE 137 (291)
T ss_pred CCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC
Confidence 589999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||+++..... ..+..|++.|+|||.+. +..++.++|||||||++|||++|.+|
T Consensus 138 ~~~kl~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~il~~l~~g~~p 197 (291)
T cd05612 138 GHIKLTDFGFAKKLRDR----------TWTLCGTPEYLAPEVIQ----------SKGHNKAVDWWALGILIYEMLVGYPP 197 (291)
T ss_pred CCEEEEecCcchhccCC----------cccccCChhhcCHHHHc----------CCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 99999999998754211 12345788999999874 33568899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
|..................++...++.+++||.+||+.||.+|++ ++|+++|
T Consensus 198 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 198 FFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred CCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 876544332222222223345556789999999999999999995 9999998
No 46
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=2.9e-30 Score=301.07 Aligned_cols=194 Identities=24% Similarity=0.279 Sum_probs=169.4
Q ss_pred CCCCCcceeeEEEEeCCe-EEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETDKA-AYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~-~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
|.|||||.|.+.|+.++. .||||+||+ |+|.+.|... ..+++..+.+++.|++.|++|||+++|+|||||+.||++
T Consensus 60 ~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifl 139 (426)
T KOG0589|consen 60 LLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFL 139 (426)
T ss_pred ccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhc
Confidence 579999999999999887 999999999 6999999764 458999999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++.|+|.|||++|....+. .+..+..||+.||+||++. +.+|+.|+|||||||++|||++-
T Consensus 140 tk~~~VkLgDfGlaK~l~~~~-------~~a~tvvGTp~YmcPEil~----------d~pYn~KSDiWsLGC~~yEm~~l 202 (426)
T KOG0589|consen 140 TKDKKVKLGDFGLAKILNPED-------SLASTVVGTPYYMCPEILS----------DIPYNEKSDIWSLGCCLYEMCTL 202 (426)
T ss_pred cccCceeecchhhhhhcCCch-------hhhheecCCCcccCHHHhC----------CCCCCccCcchhhcchHHHHHhc
Confidence 999999999999999774322 1235678999999999875 56899999999999999999999
Q ss_pred CCCCCchHHHHHHhcCCCC-CcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELSHLLAYRRGQYDP-SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~~~~~-~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+++|...+...+....... ...++...+.+++.||..||..+|..||++.++|.+
T Consensus 203 k~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 203 KPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 9999988766554333322 244677778899999999999999999999999987
No 47
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.96 E-value=3.4e-30 Score=294.94 Aligned_cols=210 Identities=16% Similarity=0.138 Sum_probs=174.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+||||+.|.+++...-.+|||||||. |-|+..|+.+..++......|..+|+.|++|||.++|||||||..||||+.+
T Consensus 169 LkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~ 248 (904)
T KOG4721|consen 169 LKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYD 248 (904)
T ss_pred ccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeecc
Confidence 689999999999999999999999999 8999999998889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
..|||+|||-++.... .+ ..-.++||..|||||++. +.+++.|+||||||+|||||+||..|
T Consensus 249 d~VKIsDFGTS~e~~~-------~S-TkMSFaGTVaWMAPEvIr----------nePcsEKVDIwSfGVVLWEmLT~EiP 310 (904)
T KOG4721|consen 249 DVVKISDFGTSKELSD-------KS-TKMSFAGTVAWMAPEVIR----------NEPCSEKVDIWSFGVVLWEMLTGEIP 310 (904)
T ss_pred ceEEeccccchHhhhh-------hh-hhhhhhhhHhhhCHHHhh----------cCCcccccceehhHHHHHHHHhcCCC
Confidence 9999999998875421 11 112456899999999875 56889999999999999999999999
Q ss_pred CCchHHHHHHhcCCC--CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcccCCCCCChhhhhhh
Q 000470 160 FELSHLLAYRRGQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFY 229 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~--~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fp~~f~~~l~~~~ 229 (1472)
|..-.-..+.-+.-. .....+.-.++.++-||++||+-.|..||++.++|.|| .+.-|+.|..--..|+
T Consensus 311 YkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl-dIa~pell~~tee~yf 381 (904)
T KOG4721|consen 311 YKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL-DIASPELLSTTEETYF 381 (904)
T ss_pred ccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH-hhcCHHHhcccHHHHH
Confidence 975554444433333 23345667778999999999999999999999999995 4444555543233343
No 48
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.96 E-value=1.4e-29 Score=300.52 Aligned_cols=193 Identities=18% Similarity=0.203 Sum_probs=162.4
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++++++++...|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 54 ~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~ 133 (320)
T cd05590 54 NHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG 133 (320)
T ss_pred CCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC
Confidence 69999999999999999999999999 69999998888899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++....... ......|++.|+|||++. +..++.++||||+||++|||++|++||
T Consensus 134 ~~kL~DfG~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~Pf 196 (320)
T cd05590 134 HCKLADFGMCKEGIFNGK-------TTSTFCGTPDYIAPEILQ----------EMLYGPSVDWWAMGVLLYEMLCGHAPF 196 (320)
T ss_pred cEEEeeCCCCeecCcCCC-------cccccccCccccCHHHHc----------CCCCCCccchhhhHHHHHHHhhCCCCC
Confidence 999999999875321111 123456889999999874 346788999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH------HHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA------ESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa------~elL~~ 211 (1472)
.......+...........+...+..+++||.+||+.||++|+++ +++++|
T Consensus 197 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 197 EAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred CCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 766544433333333333455667899999999999999999998 888877
No 49
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.96 E-value=8.7e-30 Score=303.54 Aligned_cols=191 Identities=19% Similarity=0.184 Sum_probs=160.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.++..|+||||+. |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 75 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~ 154 (329)
T PTZ00263 75 LSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNK 154 (329)
T ss_pred CCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCC
Confidence 589999999999999999999999998 6999999988889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++..... . .+..|++.|+|||.+. +..++.++|||||||++|||++|.+|
T Consensus 155 ~~~kl~Dfg~~~~~~~~-----~-----~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~elltg~~p 214 (329)
T PTZ00263 155 GHVKVTDFGFAKKVPDR-----T-----FTLCGTPEYLAPEVIQ----------SKGHGKAVDWWTMGVLLYEFIAGYPP 214 (329)
T ss_pred CCEEEeeccCceEcCCC-----c-----ceecCChhhcCHHHHc----------CCCCCCcceeechHHHHHHHHcCCCC
Confidence 99999999998754211 1 1345789999999875 33568899999999999999999888
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
|..................++...+..+++||.+||+.||.+|++ ++++++|
T Consensus 215 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 215 FFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 865443332222222223355567788999999999999999997 7999988
No 50
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.96 E-value=9.4e-30 Score=304.15 Aligned_cols=191 Identities=17% Similarity=0.200 Sum_probs=160.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.++...|+||||+. |+|.+++..++.+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 88 l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~ 167 (340)
T PTZ00426 88 INHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKD 167 (340)
T ss_pred CCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCC
Confidence 579999999999999999999999998 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||+++..... ..+..|++.|+|||.+. +..++.++||||+||++|||++|.+|
T Consensus 168 ~~ikL~DFG~a~~~~~~----------~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~ell~G~~P 227 (340)
T PTZ00426 168 GFIKMTDFGFAKVVDTR----------TYTLCGTPEYIAPEILL----------NVGHGKAADWWTLGIFIYEILVGCPP 227 (340)
T ss_pred CCEEEecCCCCeecCCC----------cceecCChhhcCHHHHh----------CCCCCccccccchhhHHHHHhcCCCC
Confidence 99999999998754210 12346789999999875 33568899999999999999999988
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|..................++...++.++++|.+||+.||++|+ +++++++|
T Consensus 228 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 228 FYANEPLLIYQKILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 87554333222222222234556678899999999999999996 89999998
No 51
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.96 E-value=1.2e-29 Score=301.74 Aligned_cols=194 Identities=20% Similarity=0.210 Sum_probs=160.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.++.+...|+||||+. |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 53 l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~ 132 (323)
T cd05575 53 VKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQ 132 (323)
T ss_pred CCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC
Confidence 579999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....... ......|++.|+|||.+. +..++.++|||||||++|||++|.+|
T Consensus 133 ~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~ell~g~~p 195 (323)
T cd05575 133 GHVVLTDFGLCKEGIEHSK-------TTSTFCGTPEYLAPEVLR----------KQPYDRTVDWWCLGAVLYEMLYGLPP 195 (323)
T ss_pred CcEEEeccCCCcccccCCC-------ccccccCChhhcChhhhc----------CCCCCccccccccchhhhhhhcCCCC
Confidence 9999999999875321111 112345789999999874 34678899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH----HHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA----ESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa----~elL~~ 211 (1472)
|..................++...++.+.++|.+||+.||++||++ .++++|
T Consensus 196 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 196 FYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence 9765444333222222223344457889999999999999999987 577776
No 52
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.96 E-value=1.8e-29 Score=300.56 Aligned_cols=194 Identities=16% Similarity=0.170 Sum_probs=163.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++.+++.+...|+||||++ |+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 52 l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~ 131 (328)
T cd05593 52 TRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKD 131 (328)
T ss_pred CCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCC
Confidence 579999999999999999999999999 6999999888789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++...... ......+|++.|+|||.+. +..++.++|||||||++|||++|.+|
T Consensus 132 ~~~kL~DfG~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~elltG~~P 194 (328)
T cd05593 132 GHIKITDFGLCKEGITDA-------ATMKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLP 194 (328)
T ss_pred CcEEEecCcCCccCCCcc-------cccccccCCcCccChhhhc----------CCCCCccCCccccchHHHHHhhCCCC
Confidence 999999999987532111 1123456889999999874 33578899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|..................++...++++++||.+||+.||++|+ ++.|+++|
T Consensus 195 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 195 FYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 97655444433333333345566778999999999999999997 89999998
No 53
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.96 E-value=2.6e-29 Score=298.74 Aligned_cols=194 Identities=18% Similarity=0.233 Sum_probs=162.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.++..|+||||+. |+|.+++...+.+.+.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 57 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~ 136 (323)
T cd05584 57 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQ 136 (323)
T ss_pred CCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC
Confidence 589999999999999999999999999 5999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||+++....... ......|++.|+|||.+. +..++.++|||||||++|||++|++|
T Consensus 137 ~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~ell~G~~p 199 (323)
T cd05584 137 GHVKLTDFGLCKESIHEGT-------VTHTFCGTIEYMAPEILM----------RSGHGKAVDWWSLGALMYDMLTGAPP 199 (323)
T ss_pred CCEEEeeCcCCeecccCCC-------cccccCCCccccChhhcc----------CCCCCCcceecccHHHHHHHhcCCCC
Confidence 9999999999874321111 112346789999999875 23567899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|..................++...++.+++||.+||++||++|| +++++++|
T Consensus 200 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 200 FTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 97655443332222223345566678999999999999999999 89999998
No 54
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.96 E-value=2.2e-29 Score=299.29 Aligned_cols=194 Identities=16% Similarity=0.177 Sum_probs=161.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+||||++ |+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 52 l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~ 131 (323)
T cd05595 52 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 131 (323)
T ss_pred CCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCC
Confidence 579999999999999999999999999 6999999888789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....... ......|++.|+|||++. +..++.++|||||||++|||++|+.|
T Consensus 132 ~~~kL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~ell~g~~P 194 (323)
T cd05595 132 GHIKITDFGLCKEGISDGA-------TMKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLP 194 (323)
T ss_pred CCEEecccHHhccccCCCC-------ccccccCCcCcCCccccc----------CCCCCchhchhhhHHHHHHHHhCCCC
Confidence 9999999998774321111 123346789999999874 34678899999999999999999988
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|..................++...++.+++||.+||+.||++|+ ++.++++|
T Consensus 195 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 195 FYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 86554333322222222234556678999999999999999998 89999998
No 55
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.96 E-value=2.7e-29 Score=297.58 Aligned_cols=193 Identities=15% Similarity=0.184 Sum_probs=160.6
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||+++++++++++..|+||||+. |+|.+++..+..+++.++..++.||+.||+|||++||+||||||+|||++.++
T Consensus 54 ~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~ 133 (316)
T cd05620 54 ENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG 133 (316)
T ss_pred CCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC
Confidence 79999999999999999999999999 69999998887899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++....... ......|++.|+|||.+. +..++.++||||+||++|||++|.+||
T Consensus 134 ~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~el~~g~~Pf 196 (316)
T cd05620 134 HIKIADFGMCKENVFGDN-------RASTFCGTPDYIAPEILQ----------GLKYTFSVDWWSFGVLLYEMLIGQSPF 196 (316)
T ss_pred CEEeCccCCCeecccCCC-------ceeccCCCcCccCHHHHc----------CCCCCcccchhhhHHHHHHHHhCCCCC
Confidence 999999998764321111 123456789999999875 346788999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH-HHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA-ESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa-~elL~~ 211 (1472)
..................++...+.++++||.+||+.||++|+++ +++++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 197 HGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGH 248 (316)
T ss_pred CCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 755443333222222334555677899999999999999999997 577777
No 56
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.96 E-value=3.3e-29 Score=292.81 Aligned_cols=195 Identities=23% Similarity=0.347 Sum_probs=156.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.+++..|+||||++|+|.+++... ..+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 60 l~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~ 139 (288)
T cd07871 60 LKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEK 139 (288)
T ss_pred CCCCCEeeEEEEEcCCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC
Confidence 5899999999999999999999999999999998764 357999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....+.. ......+++.|+|||.+.+ ...++.++||||+||++|||++|++|
T Consensus 140 ~~~kl~DfG~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~~l~~l~~g~~p 203 (288)
T cd07871 140 GELKLADFGLARAKSVPTK-------TYSNEVVTLWYRPPDVLLG---------STEYSTPIDMWGVGCILYEMATGRPM 203 (288)
T ss_pred CCEEECcCcceeeccCCCc-------cccCceecccccChHHhcC---------CcccCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999875432211 1123456888999998742 23578899999999999999999999
Q ss_pred CCchHHHH----HHhcCCC--------------------CC------cccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 160 FELSHLLA----YRRGQYD--------------------PS------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 160 f~~~~~~~----~~~~~~~--------------------~~------~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
|....... +.+.... +. .......++++++||.+||+.||.+|||++|++
T Consensus 204 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l 283 (288)
T cd07871 204 FPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAAL 283 (288)
T ss_pred CCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 96543221 1110000 00 001123467899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 284 ~h 285 (288)
T cd07871 284 RH 285 (288)
T ss_pred cC
Confidence 98
No 57
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.96 E-value=1.4e-27 Score=248.93 Aligned_cols=276 Identities=17% Similarity=0.251 Sum_probs=218.9
Q ss_pred CCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCcccccc
Q 000470 1070 HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYS 1149 (1472)
Q Consensus 1070 ~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~ 1149 (1472)
.-+|||+|.|.|||+|...++. +..+.....+.|..+...|+++.||+|+. ..||+||+.+.+
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~------C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~n---------- 72 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGI------CSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNN---------- 72 (311)
T ss_pred ceEEEeccCcceeeeeehhcCe------EEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCC----------
Confidence 3589999999999999999887 45566667778999999999999988885 679999998421
Q ss_pred CcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeC
Q 000470 1150 GISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSS 1229 (1472)
Q Consensus 1150 ~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGss 1229 (1472)
..++..+..+ ..-|..+.|..+ |..+++|+.||++++||+|...+.+.++ |..+|++++.+|++.-|++|..
T Consensus 73 -p~Pv~t~e~h-~kNVtaVgF~~d---grWMyTgseDgt~kIWdlR~~~~qR~~~---~~spVn~vvlhpnQteLis~dq 144 (311)
T KOG0315|consen 73 -PNPVATFEGH-TKNVTAVGFQCD---GRWMYTGSEDGTVKIWDLRSLSCQRNYQ---HNSPVNTVVLHPNQTELISGDQ 144 (311)
T ss_pred -CCceeEEecc-CCceEEEEEeec---CeEEEecCCCceEEEEeccCcccchhcc---CCCCcceEEecCCcceEEeecC
Confidence 1233344433 344677889988 8899999999999999999987777665 4689999999999999999999
Q ss_pred CCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCC
Q 000470 1230 RGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDT 1309 (1472)
Q Consensus 1230 dG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~ 1309 (1472)
+|.|++||++...+...+......+|.++.. +|++. +++++...|...+|++-..+-...+.
T Consensus 145 sg~irvWDl~~~~c~~~liPe~~~~i~sl~v-~~dgs---------ml~a~nnkG~cyvW~l~~~~~~s~l~-------- 206 (311)
T KOG0315|consen 145 SGNIRVWDLGENSCTHELIPEDDTSIQSLTV-MPDGS---------MLAAANNKGNCYVWRLLNHQTASELE-------- 206 (311)
T ss_pred CCcEEEEEccCCccccccCCCCCcceeeEEE-cCCCc---------EEEEecCCccEEEEEccCCCccccce--------
Confidence 9999999999887777666556678999988 77665 78888888999999987633222211
Q ss_pred ccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCCCCCCceEE
Q 000470 1310 EMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCI 1388 (1472)
Q Consensus 1310 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv 1388 (1472)
|..+ ...|...+..+.++|++ +|+|+|+|.++++|+.++- +
T Consensus 207 -----------P~~k----------------------~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~---~-- 248 (311)
T KOG0315|consen 207 -----------PVHK----------------------FQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF---F-- 248 (311)
T ss_pred -----------Ehhh----------------------eecccceEEEEEECCCCcEEEeecCCceEEEEecCCc---e--
Confidence 1111 23455678888999999 6779999999999998754 0
Q ss_pred eCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceE
Q 000470 1389 CGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAI 1468 (1472)
Q Consensus 1389 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~I 1468 (1472)
..| ..+.||+..+++.+ |+.+++||+||+.|+++
T Consensus 249 ------------------------kle---------------------~~l~gh~rWvWdc~-FS~dg~YlvTassd~~~ 282 (311)
T KOG0315|consen 249 ------------------------KLE---------------------LVLTGHQRWVWDCA-FSADGEYLVTASSDHTA 282 (311)
T ss_pred ------------------------eeE---------------------EEeecCCceEEeee-eccCccEEEecCCCCce
Confidence 011 12346999999996 99999999999999999
Q ss_pred EEcC
Q 000470 1469 KVWK 1472 (1472)
Q Consensus 1469 kVWk 1472 (1472)
++|+
T Consensus 283 rlW~ 286 (311)
T KOG0315|consen 283 RLWD 286 (311)
T ss_pred eecc
Confidence 9996
No 58
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=4.7e-29 Score=279.84 Aligned_cols=217 Identities=23% Similarity=0.250 Sum_probs=169.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
+.||.+..+|..|++++..|++||||+ |+|+...++++ .+++..+++++.+++.||+|||-.|||.||||||||||-
T Consensus 134 lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvr 213 (459)
T KOG0610|consen 134 LDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVR 213 (459)
T ss_pred cCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEe
Confidence 589999999999999999999999999 69999988764 599999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccC-C----CCC--------------CCCC------------------------------ceeec
Q 000470 78 SWNWLYLSDFASFKPTYI-P----YDD--------------PSDF------------------------------SFFFD 108 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~-~----~~~--------------~~~~------------------------------~~~~~ 108 (1472)
++|++.|+||.++..... | ... +..| ...-.
T Consensus 214 edGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSn 293 (459)
T KOG0610|consen 214 EDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSN 293 (459)
T ss_pred cCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccc
Confidence 999999999987654321 1 000 0000 01112
Q ss_pred cCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHHHHhcCCCCCcccCC--CCCHH
Q 000470 109 TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK--IPDSG 186 (1472)
Q Consensus 109 ~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~l~~--~~~~~ 186 (1472)
...||-.|+|||++. +...+.++|.|+||+++|||+.|..||.+....+...+.......++. ..+..
T Consensus 294 SFVGThEYlAPEvI~----------G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~ 363 (459)
T KOG0610|consen 294 SFVGTHEYLAPEVIR----------GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSA 363 (459)
T ss_pred ccccccccccceeee----------cCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhH
Confidence 345788899999876 345678999999999999999999999876655443333332222332 34568
Q ss_pred HHHHHHHhcccCcCCCCC----HHHHHHHhhcccCCCCCChhhhhhhhccCC
Q 000470 187 IRKMILHMIQLEPELRFS----AESYLQNYAAVVFPTYFSPFLHNFYCCWNP 234 (1472)
Q Consensus 187 l~~LI~~mL~~dP~~Rps----a~elL~~~~~~~fp~~f~~~l~~~~~~~~~ 234 (1472)
++|||+++|.+||.+|.. |.||-+| ++|...-.+.+.+..|
T Consensus 364 akDLIr~LLvKdP~kRlg~~rGA~eIK~H-------pFF~gVnWaLir~~~P 408 (459)
T KOG0610|consen 364 AKDLIRKLLVKDPSKRLGSKRGAAEIKRH-------PFFEGVNWALIRCARP 408 (459)
T ss_pred HHHHHHHHhccChhhhhccccchHHhhcC-------ccccCCChhheeccCC
Confidence 999999999999999998 9999998 6666555555554443
No 59
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.96 E-value=3.6e-29 Score=297.28 Aligned_cols=193 Identities=17% Similarity=0.194 Sum_probs=161.9
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||+++++++++++..|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 54 ~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~ 133 (321)
T cd05591 54 KHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG 133 (321)
T ss_pred CCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence 79999999999999999999999999 69999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++....... ......|++.|+|||.+. +..++.++|||||||++|||++|++||
T Consensus 134 ~~kL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~tg~~Pf 196 (321)
T cd05591 134 HCKLADFGMCKEGILNGV-------TTTTFCGTPDYIAPEILQ----------ELEYGPSVDWWALGVLMYEMMAGQPPF 196 (321)
T ss_pred CEEEeecccceecccCCc-------cccccccCccccCHHHHc----------CCCCCCccceechhHHHHHHhcCCCCC
Confidence 999999998875322111 123445789999999774 346788999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-------CHHHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-------SAESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-------sa~elL~~ 211 (1472)
...................+...+.++.++|.+||+.||++|+ +++++++|
T Consensus 197 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 197 EADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 7655443333222222334455678999999999999999999 89999988
No 60
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=8.5e-30 Score=274.89 Aligned_cols=205 Identities=20% Similarity=0.201 Sum_probs=169.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+|+||+.++++||++..+|||||-|. |.|...|.++..+++.|+..+..+|+.||.|||.+||.||||||||||..+.+
T Consensus 134 gh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn 213 (463)
T KOG0607|consen 134 GHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPN 213 (463)
T ss_pred CCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCC
Confidence 69999999999999999999999999 69999999999999999999999999999999999999999999999998877
Q ss_pred c---EEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 81 W---LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 81 ~---vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
. +|||||.+........+-.....--+.+.+|+..|||||+..-. +.....|++++|.||||+|+|-|+.|.
T Consensus 214 ~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~f-----v~qA~~YDKrCDlwSLGvIlYImLsGY 288 (463)
T KOG0607|consen 214 KVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVF-----VDQATFYDKRCDLWSLGVILYIMLSGY 288 (463)
T ss_pred CcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhh-----ccccccccccccHHHHHHHHHHHHhCC
Confidence 5 89999976543322222111122234578899999999986422 344567999999999999999999999
Q ss_pred CCCCch------------------H-HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELS------------------H-LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~------------------~-~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|||.+. . ...+..+.|..+..-+...+.+.++||..+|.+|+.+|.++.++++|
T Consensus 289 pPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 289 PPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred CCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 999421 1 23456677775544444556789999999999999999999999988
No 61
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.96 E-value=5.5e-29 Score=294.95 Aligned_cols=193 Identities=16% Similarity=0.201 Sum_probs=160.7
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++++++.+...|+||||++ |+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 54 ~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~ 133 (316)
T cd05592 54 EHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG 133 (316)
T ss_pred CCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC
Confidence 79999999999999999999999998 69999998887899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+||+|||+++...... ......+|++.|+|||.+. +..++.++||||+||++|||++|..||
T Consensus 134 ~~kL~Dfg~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~ell~G~~Pf 196 (316)
T cd05592 134 HIKIADFGMCKENMNGE-------GKASTFCGTPDYIAPEILK----------GQKYNESVDWWSFGVLLYEMLIGQSPF 196 (316)
T ss_pred CEEEccCcCCeECCCCC-------CccccccCCccccCHHHHc----------CCCCCCcccchhHHHHHHHHHhCCCCC
Confidence 99999999987542211 1123456889999999874 345788999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHH-HHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAE-SYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~-elL~~ 211 (1472)
..................++...+.++++||.+||+.||++||++. ++++|
T Consensus 197 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 197 HGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred CCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 7554433322222223345566778899999999999999999864 67776
No 62
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.96 E-value=3.6e-27 Score=250.21 Aligned_cols=303 Identities=20% Similarity=0.263 Sum_probs=238.4
Q ss_pred ceeeeccccccceeEEEEcCC-CCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCC
Q 000470 1049 ILVAHLQEHCSAVNEIAISHD-HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1127 (1472)
Q Consensus 1049 ~lV~~l~~H~~~V~~lafspd-~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~D 1127 (1472)
.+..+|++|.+.|+.++..+. ...++++|.|.++.+|++.+.+. ........+.+|...|..+..+++|+..++++.|
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~-~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD 84 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDI-KYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWD 84 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCcc-ccCceeeeeeccceEecceEEccCCceEEecccc
Confidence 356789999999999999886 45899999999999999987532 1223556788899999999999999999999999
Q ss_pred CcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCC
Q 000470 1128 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207 (1472)
Q Consensus 1128 G~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~ 1207 (1472)
|++++||+.+. ...+....|...|.+++|+++ ...+++|+.|.+|.+|++.. .+..++....
T Consensus 85 ~~lrlWDl~~g--------------~~t~~f~GH~~dVlsva~s~d---n~qivSGSrDkTiklwnt~g-~ck~t~~~~~ 146 (315)
T KOG0279|consen 85 GTLRLWDLATG--------------ESTRRFVGHTKDVLSVAFSTD---NRQIVSGSRDKTIKLWNTLG-VCKYTIHEDS 146 (315)
T ss_pred ceEEEEEecCC--------------cEEEEEEecCCceEEEEecCC---CceeecCCCcceeeeeeecc-cEEEEEecCC
Confidence 99999999841 122334466777888999999 56899999999999999974 5556666555
Q ss_pred CccceEEEEEcCC--CCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000470 1208 EEGYVSSLVTGPC--GNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1285 (1472)
Q Consensus 1208 h~g~Itsl~~sp~--g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~ 1285 (1472)
+.+.|+|++|+|+ ...|++++.|++|++||++..+....+.. |..-++.+.+ +|++. ++++|+.||+
T Consensus 147 ~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~g-h~~~v~t~~v-SpDGs---------lcasGgkdg~ 215 (315)
T KOG0279|consen 147 HREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIG-HSGYVNTVTV-SPDGS---------LCASGGKDGE 215 (315)
T ss_pred CcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhcccc-ccccEEEEEE-CCCCC---------EEecCCCCce
Confidence 5889999999997 68999999999999999998877766553 6667788777 77664 7888888999
Q ss_pred EEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCCcE
Q 000470 1286 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDL 1365 (1472)
Q Consensus 1286 V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~l 1365 (1472)
+.+||+..+++.+.+. +...|++++|+|+.+.
T Consensus 216 ~~LwdL~~~k~lysl~------------------------------------------------a~~~v~sl~fspnryw 247 (315)
T KOG0279|consen 216 AMLWDLNEGKNLYSLE------------------------------------------------AFDIVNSLCFSPNRYW 247 (315)
T ss_pred EEEEEccCCceeEecc------------------------------------------------CCCeEeeEEecCCcee
Confidence 9999999998866654 1126999999999988
Q ss_pred EEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccc
Q 000470 1366 LTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDS 1445 (1472)
Q Consensus 1366 lTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~ 1445 (1472)
++...+..|++||+++......+. .+..++ ..+.-.-.
T Consensus 248 L~~at~~sIkIwdl~~~~~v~~l~---~d~~g~---------------------------------------s~~~~~~~ 285 (315)
T KOG0279|consen 248 LCAATATSIKIWDLESKAVVEELK---LDGIGP---------------------------------------SSKAGDPI 285 (315)
T ss_pred EeeccCCceEEEeccchhhhhhcc---cccccc---------------------------------------ccccCCcE
Confidence 888888889999998765533221 111000 00011223
Q ss_pred eeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1446 ILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1446 I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
..++| |+.+|..|.+|..||.|++|.
T Consensus 286 clsla-ws~dG~tLf~g~td~~irv~q 311 (315)
T KOG0279|consen 286 CLSLA-WSADGQTLFAGYTDNVIRVWQ 311 (315)
T ss_pred EEEEE-EcCCCcEEEeeecCCcEEEEE
Confidence 46676 899999999999999999993
No 63
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.96 E-value=2.4e-29 Score=299.37 Aligned_cols=194 Identities=17% Similarity=0.175 Sum_probs=162.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++.+++.+...|+||||++ |+|.+++.....+++.+++.++.||+.||.|||+ +||+||||||+|||++.
T Consensus 52 ~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~ 131 (325)
T cd05594 52 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 131 (325)
T ss_pred CCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC
Confidence 479999999999999999999999999 6999999887789999999999999999999997 79999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
+|.+||+|||+++....... ......|++.|+|||++. +..++.++|||||||++|||++|..
T Consensus 132 ~~~~kL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~tG~~ 194 (325)
T cd05594 132 DGHIKITDFGLCKEGIKDGA-------TMKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRL 194 (325)
T ss_pred CCCEEEecCCCCeecCCCCc-------ccccccCCcccCCHHHHc----------cCCCCCccccccccceeeeeccCCC
Confidence 99999999999874321111 123446889999999874 3467889999999999999999999
Q ss_pred CCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 159 FFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
||..................++...++++++||.+||+.||++|+ ++.++++|
T Consensus 195 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 195 PFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 986554433333222222334556778999999999999999997 89999998
No 64
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.8e-30 Score=298.63 Aligned_cols=196 Identities=24% Similarity=0.249 Sum_probs=171.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFL--SLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l--~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
|.|.|||+|.+.+..++.+-|+||-++ |+|.+++..+ +++ ++...-++.+||++||.|||++.|||||||-+|+||
T Consensus 629 LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLv 708 (1226)
T KOG4279|consen 629 LRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLV 708 (1226)
T ss_pred HhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEE
Confidence 579999999999999999999999999 6999999764 556 888999999999999999999999999999999999
Q ss_pred c-cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 77 T-SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 77 ~-~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
+ -.|.+||+|||-+|+... .+-...|..||..|||||++. .....|++++|||||||++.||.|
T Consensus 709 NTySGvlKISDFGTsKRLAg-------inP~TETFTGTLQYMAPEvID--------qG~RGYG~aADIWS~GCT~vEMAT 773 (1226)
T KOG4279|consen 709 NTYSGVLKISDFGTSKRLAG-------INPCTETFTGTLQYMAPEVID--------QGPRGYGKAADIWSFGCTMVEMAT 773 (1226)
T ss_pred eeccceEEecccccchhhcc-------CCccccccccchhhhChHhhc--------cCCcCCCchhhhhhccceeEeecc
Confidence 6 468999999999987632 223446777999999999986 334579999999999999999999
Q ss_pred CCCCCC---chHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFE---LSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~---~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|+|||. ..+-..++.+-|...+.+|...+.+++.||.+|+..||.+||+|.++|++
T Consensus 774 GrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 774 GRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 999994 34455567788888788888888999999999999999999999999986
No 65
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.96 E-value=5.9e-27 Score=256.64 Aligned_cols=329 Identities=15% Similarity=0.237 Sum_probs=253.6
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCc
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1129 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~ 1129 (1472)
-+.+|.+|+++|.+++.+|+.+++|||+.|....||++.+++ ......+|+..|+++.|+.+|.+||+|+.+|.
T Consensus 56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge------~~~eltgHKDSVt~~~FshdgtlLATGdmsG~ 129 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE------FAGELTGHKDSVTCCSFSHDGTLLATGDMSGK 129 (399)
T ss_pred ceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCc------ceeEecCCCCceEEEEEccCceEEEecCCCcc
Confidence 467899999999999999999999999999999999999987 44567789999999999999999999999999
Q ss_pred EEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCc
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1209 (1472)
Q Consensus 1130 I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~ 1209 (1472)
|+||++.+.. ...... .+..-+..+.|+|. +.+|++|+.||.+.+|.+..+...+.+.+ |.
T Consensus 130 v~v~~~stg~-------------~~~~~~-~e~~dieWl~WHp~---a~illAG~~DGsvWmw~ip~~~~~kv~~G--h~ 190 (399)
T KOG0296|consen 130 VLVFKVSTGG-------------EQWKLD-QEVEDIEWLKWHPR---AHILLAGSTDGSVWMWQIPSQALCKVMSG--HN 190 (399)
T ss_pred EEEEEcccCc-------------eEEEee-cccCceEEEEeccc---ccEEEeecCCCcEEEEECCCcceeeEecC--CC
Confidence 9999997411 112222 34455667789997 78999999999999999998777777766 89
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEE
Q 000470 1210 GYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1289 (1472)
Q Consensus 1210 g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VW 1289 (1472)
..+++=+|.|+|..+++|..||+|++||+.++.++..........-.++.+ ...+..++.+..++.+.+-
T Consensus 191 ~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~----------~~~~~~~~~g~~e~~~~~~ 260 (399)
T KOG0296|consen 191 SPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISL----------NLAGSTLTKGNSEGVACGV 260 (399)
T ss_pred CCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCcccc----------ccccceeEeccCCccEEEE
Confidence 999999999999999999999999999999999888777544333444433 2234467777778888888
Q ss_pred EcCCCeEEEEEecccCCCC-------CccCCCcccccCCCCCCCCCccccccccccccc-----cccCCCCCCcCCceEe
Q 000470 1290 NAENGSCHQVLRTANYDGD-------TEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRV-----DELNEPPPRLLGIRSL 1357 (1472)
Q Consensus 1290 Dl~t~~~~~~l~~~~~~~~-------~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----~~l~~~~~~~~~V~sl 1357 (1472)
+..+|+.+.+......... .+....++.-..|+.. .+...+.+.+ ..+.....|..+|..+
T Consensus 261 ~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A-------~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l 333 (399)
T KOG0296|consen 261 NNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAA-------CGSVDGTIAIYDLAASTLRHICEHEDGVTKL 333 (399)
T ss_pred ccccceEEEecCCCCccccccchhhhhhhhhcccccccchhh-------cccccceEEEEecccchhheeccCCCceEEE
Confidence 8888887777663111110 1111222222222221 1122222333 3334446677889999
Q ss_pred ccCCCCcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcC
Q 000470 1358 LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATD 1437 (1472)
Q Consensus 1358 ~~~p~g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 1437 (1472)
.|.++.+|+|++.||+||.||.+++...+.+.|
T Consensus 334 ~w~~t~~l~t~c~~g~v~~wDaRtG~l~~~y~G----------------------------------------------- 366 (399)
T KOG0296|consen 334 KWLNTDYLLTACANGKVRQWDARTGQLKFTYTG----------------------------------------------- 366 (399)
T ss_pred EEcCcchheeeccCceEEeeeccccceEEEEec-----------------------------------------------
Confidence 998877999999999999999998877665554
Q ss_pred CCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1438 SAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1438 ~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
|+..|.+++ +.++.++++|+|.|++.+||+
T Consensus 367 ----H~~~Il~f~-ls~~~~~vvT~s~D~~a~VF~ 396 (399)
T KOG0296|consen 367 ----HQMGILDFA-LSPQKRLVVTVSDDNTALVFE 396 (399)
T ss_pred ----CchheeEEE-EcCCCcEEEEecCCCeEEEEe
Confidence 999999996 899999999999999999985
No 66
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.96 E-value=5.6e-29 Score=294.78 Aligned_cols=194 Identities=16% Similarity=0.208 Sum_probs=159.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++++++..|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 53 ~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~ 132 (316)
T cd05619 53 WEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTD 132 (316)
T ss_pred cCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC
Confidence 379999999999999999999999998 6999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||+++....... ......|++.|+|||.+. +..++.++||||+||++|||++|.+|
T Consensus 133 ~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~G~~p 195 (316)
T cd05619 133 GHIKIADFGMCKENMLGDA-------KTCTFCGTPDYIAPEILL----------GQKYNTSVDWWSFGVLLYEMLIGQSP 195 (316)
T ss_pred CCEEEccCCcceECCCCCC-------ceeeecCCccccCHHHHc----------CCCCCchhhhhhHHHHHHHHHhCCCC
Confidence 9999999999875322111 112345788999999874 34678899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHH-HHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAE-SYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~-elL~~ 211 (1472)
|...................+...+..++++|.+||+.||++||++. ++++|
T Consensus 196 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 196 FHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred CCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcC
Confidence 96554333222111112234455678899999999999999999996 78777
No 67
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.96 E-value=6.1e-29 Score=310.54 Aligned_cols=193 Identities=20% Similarity=0.238 Sum_probs=159.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||++++++++.+...||||||++ |+|.+++.. +..+++.++..++.||+.||.|||++||+||||||+|||
T Consensus 122 l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIl 201 (478)
T PTZ00267 122 CDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIF 201 (478)
T ss_pred CCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEE
Confidence 589999999999999999999999998 699887743 456899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.+||+|||+++....... .....+.+||+.|+|||++. +..++.++|||||||++|||++
T Consensus 202 l~~~~~~kL~DFgla~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~Dv~slG~~l~el~t 266 (478)
T PTZ00267 202 LMPTGIIKLGDFGFSKQYSDSVS-----LDVASSFCGTPYYLAPELWE----------RKRYSKKADMWSLGVILYELLT 266 (478)
T ss_pred ECCCCcEEEEeCcCceecCCccc-----cccccccCCCccccCHhHhC----------CCCCCcHHhHHHHHHHHHHHHh
Confidence 99999999999999876522110 11123456899999999764 3467899999999999999999
Q ss_pred CCCCCCchHHHHH----HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|++||........ ..+.+. ..+...+..+++||.+||..||++||++++++.+
T Consensus 267 g~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 267 LHRPFKGPSQREIMQQVLYGKYD---PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCC---CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 9999875443322 222222 2344566789999999999999999999999987
No 68
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.96 E-value=1.1e-28 Score=290.66 Aligned_cols=195 Identities=22% Similarity=0.310 Sum_probs=154.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.++...|+||||++++|.+++... ..+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 60 l~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~ 139 (303)
T cd07869 60 LKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDT 139 (303)
T ss_pred CCCCCcCeEEEEEecCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 5899999999999999999999999999999988764 568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....+. .......+++.|+|||++.. ...++.++||||+||++|||++|.+|
T Consensus 140 ~~~kl~Dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~~l~~g~~p 203 (303)
T cd07869 140 GELKLADFGLARAKSVPS-------HTYSNEVVTLWYRPPDVLLG---------STEYSTCLDMWGVGCIFVEMIQGVAA 203 (303)
T ss_pred CCEEECCCCcceeccCCC-------ccCCCCcccCCCCChHHHcC---------CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 999999999987542211 11234557889999998742 23578899999999999999999999
Q ss_pred CCchH-----HHHHHh--cC--------------CCCC-------cc----cCC-CCCHHHHHHHHHhcccCcCCCCCHH
Q 000470 160 FELSH-----LLAYRR--GQ--------------YDPS-------QH----LEK-IPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 160 f~~~~-----~~~~~~--~~--------------~~~~-------~~----l~~-~~~~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
|.... +..... +. +.+. .. +.. ..++.+++||.+||+.||++|||++
T Consensus 204 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~ 283 (303)
T cd07869 204 FPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQ 283 (303)
T ss_pred CCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHH
Confidence 96421 111111 00 0000 00 000 1235789999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
|+++|
T Consensus 284 ~~l~h 288 (303)
T cd07869 284 AALSH 288 (303)
T ss_pred HHhcC
Confidence 99998
No 69
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.96 E-value=1.7e-28 Score=271.44 Aligned_cols=283 Identities=15% Similarity=0.229 Sum_probs=237.1
Q ss_pred ccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q 000470 1056 EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSV 1135 (1472)
Q Consensus 1056 ~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv 1135 (1472)
.-+-.|+.|.|.|+|+.|+|||..|.+.+|+..... .......|...|.++.|++++.++++|+.+|.|++|+.
T Consensus 94 Kvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fn------FEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqp 167 (464)
T KOG0284|consen 94 KVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFN------FETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQP 167 (464)
T ss_pred ccccceeeEEEcCCCceeEeecccccEEEecCceee------HHHHhhhhcccceeEEEccCCCEEEEcCCCceEEeccc
Confidence 345689999999999999999999999999985432 34455678899999999999999999999999999988
Q ss_pred cccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEE
Q 000470 1136 DHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSL 1215 (1472)
Q Consensus 1136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl 1215 (1472)
.. ..+.....++...|.+++|+|+ ...+++++.||+|++||.+..+....+.+ |.-.|+|+
T Consensus 168 nm--------------nnVk~~~ahh~eaIRdlafSpn---DskF~t~SdDg~ikiWdf~~~kee~vL~G--HgwdVksv 228 (464)
T KOG0284|consen 168 NM--------------NNVKIIQAHHAEAIRDLAFSPN---DSKFLTCSDDGTIKIWDFRMPKEERVLRG--HGWDVKSV 228 (464)
T ss_pred ch--------------hhhHHhhHhhhhhhheeccCCC---CceeEEecCCCeEEEEeccCCchhheecc--CCCCccee
Confidence 62 1233344566678999999997 45999999999999999999998888866 77889999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCe
Q 000470 1216 VTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGS 1295 (1472)
Q Consensus 1216 ~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~ 1295 (1472)
+|+|....+++|+.|..|++||.|++.++.++.. |...|..+.| .|.+ +|+++++.|..++++|+++.+
T Consensus 229 dWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~-HKntVl~~~f-~~n~---------N~Llt~skD~~~kv~DiR~mk 297 (464)
T KOG0284|consen 229 DWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHG-HKNTVLAVKF-NPNG---------NWLLTGSKDQSCKVFDIRTMK 297 (464)
T ss_pred ccCCccceeEEccCCceeEeecCCCcchhhhhhh-ccceEEEEEE-cCCC---------CeeEEccCCceEEEEehhHhH
Confidence 9999999999999999999999999999998765 6677999988 6654 599999999999999999776
Q ss_pred EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC--cEEEccCCCe
Q 000470 1296 CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG--DLLTGGTDLK 1373 (1472)
Q Consensus 1296 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g--~llTgg~Dg~ 1373 (1472)
-+++++ +|...|+++.|+|-. .|.+||.||.
T Consensus 298 El~~~r-----------------------------------------------~Hkkdv~~~~WhP~~~~lftsgg~Dgs 330 (464)
T KOG0284|consen 298 ELFTYR-----------------------------------------------GHKKDVTSLTWHPLNESLFTSGGSDGS 330 (464)
T ss_pred HHHHhh-----------------------------------------------cchhhheeeccccccccceeeccCCCc
Confidence 555554 333478999999854 7789999999
Q ss_pred EEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeee
Q 000470 1374 IRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK 1453 (1472)
Q Consensus 1374 IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~ 1453 (1472)
|.+|.+...+.. .....+|...|++++ ++
T Consensus 331 vvh~~v~~~~p~--------------------------------------------------~~i~~AHd~~iwsl~-~h 359 (464)
T KOG0284|consen 331 VVHWVVGLEEPL--------------------------------------------------GEIPPAHDGEIWSLA-YH 359 (464)
T ss_pred eEEEeccccccc--------------------------------------------------cCCCcccccceeeee-cc
Confidence 999998622221 011234999999996 99
Q ss_pred cCCcEEEEEcCCceEEEcC
Q 000470 1454 LNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1454 ~~~~~LvS~s~DG~IkVWk 1472 (1472)
|-|.+|+|||.|.++++|-
T Consensus 360 PlGhil~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 360 PLGHILATGSNDRTVRFWT 378 (464)
T ss_pred ccceeEeecCCCcceeeec
Confidence 9999999999999999993
No 70
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.96 E-value=4e-29 Score=297.40 Aligned_cols=192 Identities=20% Similarity=0.237 Sum_probs=157.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.++..|+||||++ |+|.+++.....+.+..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 53 ~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~ 132 (325)
T cd05602 53 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ 132 (325)
T ss_pred CCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC
Confidence 579999999999999999999999999 5999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....... ......|++.|+|||++. +..++.++|||||||++|||++|.+|
T Consensus 133 ~~~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~p 195 (325)
T cd05602 133 GHIVLTDFGLCKENIEHNG-------TTSTFCGTPEYLAPEVLH----------KQPYDRTVDWWCLGAVLYEMLYGLPP 195 (325)
T ss_pred CCEEEccCCCCcccccCCC-------CcccccCCccccCHHHHc----------CCCCCCccccccccHHHHHHhcCCCC
Confidence 9999999999875321111 123456889999999775 34678899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
|...................+...+..++++|.+||+.||.+|+++.+.+
T Consensus 196 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 196 FYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 86554333222222222223344567899999999999999999887433
No 71
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-28 Score=293.17 Aligned_cols=190 Identities=26% Similarity=0.293 Sum_probs=166.6
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC--
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW-- 79 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~-- 79 (1472)
||||+.++++|++...+|+|||+|. |.|+++|..+ .+++.++..++.|++.|++|||+.||+||||||||+|+...
T Consensus 95 hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~ 173 (382)
T KOG0032|consen 95 HPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDE 173 (382)
T ss_pred CCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccC
Confidence 9999999999999999999999999 6999999887 49999999999999999999999999999999999999754
Q ss_pred --CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 80 --NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 80 --~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+.+|++|||+++.... ...+.+.+||+.|+|||++. ...|+..+||||+|+++|.|++|.
T Consensus 174 ~~~~ik~~DFGla~~~~~--------~~~~~~~~Gtp~y~APEvl~----------~~~y~~~~DiWS~Gvi~yiLL~G~ 235 (382)
T KOG0032|consen 174 GSGRIKLIDFGLAKFIKP--------GERLHTIVGTPEYVAPEVLG----------GRPYGDEVDVWSIGVILYILLSGV 235 (382)
T ss_pred CCCcEEEeeCCCceEccC--------CceEeeecCCccccCchhhc----------CCCCCcccchhHHHHHHHHHhhCC
Confidence 4799999999986522 23457788999999999764 358899999999999999999999
Q ss_pred CCCCchH----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||...+ ..++.++.+......+...+..++++|.+||..||.+|+++.++|+|
T Consensus 236 ~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 236 PPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 8886543 34566777765555555568899999999999999999999999998
No 72
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.96 E-value=9.8e-29 Score=293.97 Aligned_cols=193 Identities=18% Similarity=0.184 Sum_probs=158.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|..++.. ..+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 59 l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~ 137 (324)
T cd05589 59 ERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTE 137 (324)
T ss_pred cCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCC
Confidence 479999999999999999999999999 599888865 458999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....... ...+..|++.|+|||.+. +..++.++|||||||++|||++|++|
T Consensus 138 ~~~kL~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~G~~p 200 (324)
T cd05589 138 GFVKIADFGLCKEGMGFGD-------RTSTFCGTPEFLAPEVLT----------ETSYTRAVDWWGLGVLIYEMLVGESP 200 (324)
T ss_pred CcEEeCcccCCccCCCCCC-------cccccccCccccCHhHhc----------CCCCCcccchhhHHHHHHHHHhCCCC
Confidence 9999999998764321111 123456789999999774 34578899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|...................+...++.+.++|.+||+.||.+|| ++.++++|
T Consensus 201 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 201 FPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred CCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 97654433322222222234455678899999999999999999 68999988
No 73
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=1.5e-29 Score=297.65 Aligned_cols=196 Identities=22% Similarity=0.242 Sum_probs=176.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+|||||+++.+++++..+|+||||+. |.+++++.+.+.+.+.+++.++.|++.|++|||+++|||||||.+|||++.+
T Consensus 112 l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~ 191 (596)
T KOG0586|consen 112 LNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDEN 191 (596)
T ss_pred cCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccc
Confidence 689999999999999999999999999 7999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
.++||+|||++.... .....++.||++.|.|||+|.+.. ..++++|+||+|+++|.|+.|..|
T Consensus 192 mnikIaDfgfS~~~~--------~~~~lqt~cgsppyAaPEl~~g~~---------y~gpe~D~Wslgvvly~LV~GsLP 254 (596)
T KOG0586|consen 192 MNIKIADFGFSTFFD--------YGLMLQTFCGSPPYAAPELFNGKK---------YDGPEVDIWSLGVVLYALVEGSLP 254 (596)
T ss_pred cceeeeccccceeec--------ccccccccCCCCCccChHhhcCcc---------cCCcceehhhhhhhheeeeecccc
Confidence 999999999886552 334568999999999999997543 347899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|++..+...+.........++...+.++++||++||.++|.+|++.+++.+|.|
T Consensus 255 FDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W 308 (596)
T KOG0586|consen 255 FDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRW 308 (596)
T ss_pred cCCcccccccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhcc
Confidence 999888877665555555566667788999999999999999999999999854
No 74
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=4.1e-30 Score=320.34 Aligned_cols=201 Identities=21% Similarity=0.238 Sum_probs=167.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+|||+|+||++-.+....||.||||+ |+|.+.+....-.++...+++..|++.|+.|||++|||||||||+||+++.+
T Consensus 1291 lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~ 1370 (1509)
T KOG4645|consen 1291 LNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFN 1370 (1509)
T ss_pred ccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecC
Confidence 689999999999999999999999999 7999999887778999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+|+.|||.|+.+..+. .+...-.....||+.|||||+|.+... .....++||||||||+.||+||+.|
T Consensus 1371 g~iK~~DFGsa~ki~~~~---~~~~~el~~~~GT~~YMAPEvit~t~~-------kG~~~A~DiWslGCVVlEM~tGkrP 1440 (1509)
T KOG4645|consen 1371 GLIKYGDFGSAVKIKNNA---QTMPGELQSMMGTPMYMAPEVITGTKG-------KGHGGAADIWSLGCVVLEMATGKRP 1440 (1509)
T ss_pred CcEEeecccceeEecCch---hcCCHHHHhhcCCchhcCchhhccccc-------CCCCcchhhhcccceEEEeecCCCc
Confidence 999999999998764432 112222345678999999999985532 2456789999999999999999888
Q ss_pred CC-chHHHHHH-hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FE-LSHLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~-~~~~~~~~-~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|. .+..+.+. +-.....+.+|...+.+.++||.+||+.||++|.++.|+++|
T Consensus 1441 W~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1441 WAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred hhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 84 44433332 222223345666688899999999999999999999999998
No 75
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.8e-30 Score=290.10 Aligned_cols=194 Identities=19% Similarity=0.142 Sum_probs=165.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+||||.+||+.|..+..++++||||. |++.+.++..+.+.+.++.+++++++.||.|+|.++.+|||||+.|||+...
T Consensus 68 ~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~ 147 (467)
T KOG0201|consen 68 CDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSES 147 (467)
T ss_pred cCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEecc
Confidence 578999999999999999999999999 6999999998888999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||.+...... .....+..||+.|||||++. ...|+.++||||||++.+||++|.||
T Consensus 148 g~vkl~DfgVa~ql~~~-------~~rr~tfvGTPfwMAPEVI~----------~~~Y~~KADIWSLGITaiEla~GePP 210 (467)
T KOG0201|consen 148 GDVKLADFGVAGQLTNT-------VKRRKTFVGTPFWMAPEVIK----------QSGYDTKADIWSLGITAIELAKGEPP 210 (467)
T ss_pred CcEEEEecceeeeeech-------hhccccccccccccchhhhc----------cccccchhhhhhhhHHHHHHhcCCCC
Confidence 99999999988654221 12226778999999999875 34789999999999999999999999
Q ss_pred CCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+..-....+.- .....++.+....++.+++||..||.+||+.||+|.++|+|
T Consensus 211 ~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 211 HSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred CcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 96443322211 11223444566778889999999999999999999999998
No 76
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.3e-28 Score=299.49 Aligned_cols=195 Identities=21% Similarity=0.195 Sum_probs=153.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
|+||||+++++++..+...|+|+|++.++|++++..+..+++.+++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 140 l~HpnIv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~ 219 (391)
T PHA03212 140 INHPSIIQLKGTFTYNKFTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG 219 (391)
T ss_pred CCCCCCCCEeEEEEECCeeEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC
Confidence 68999999999999999999999999999999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC-
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF- 159 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p- 159 (1472)
.+||+|||+++....... .......||+.|+|||++. +..++.++||||+||++|||++|.+|
T Consensus 220 ~vkL~DFG~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~elltg~~p~ 283 (391)
T PHA03212 220 DVCLGDFGAACFPVDINA------NKYYGWAGTIATNAPELLA----------RDPYGPAVDIWSAGIVLFEMATCHDSL 283 (391)
T ss_pred CEEEEeCCcccccccccc------cccccccCccCCCChhhhc----------CCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 999999999864311110 0112346899999999774 34678999999999999999999644
Q ss_pred CCch----------HHHHHHhcC--------------------------CC-C--CcccC--CCCCHHHHHHHHHhcccC
Q 000470 160 FELS----------HLLAYRRGQ--------------------------YD-P--SQHLE--KIPDSGIRKMILHMIQLE 198 (1472)
Q Consensus 160 f~~~----------~~~~~~~~~--------------------------~~-~--~~~l~--~~~~~~l~~LI~~mL~~d 198 (1472)
|... .+..+.... .. + .+.+. ...+.++++||.+||+.|
T Consensus 284 ~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~d 363 (391)
T PHA03212 284 FEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFD 363 (391)
T ss_pred CCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCC
Confidence 4321 111111000 00 0 00000 012457899999999999
Q ss_pred cCCCCCHHHHHHH
Q 000470 199 PELRFSAESYLQN 211 (1472)
Q Consensus 199 P~~Rpsa~elL~~ 211 (1472)
|++||||+|+|+|
T Consensus 364 P~~Rpta~elL~h 376 (391)
T PHA03212 364 AHHRPSAEALLDF 376 (391)
T ss_pred hhhCCCHHHHhcC
Confidence 9999999999998
No 77
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.96 E-value=1.2e-28 Score=293.80 Aligned_cols=193 Identities=18% Similarity=0.207 Sum_probs=157.9
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++++++++...|+||||++ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 54 ~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~ 133 (329)
T cd05618 54 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 133 (329)
T ss_pred CCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC
Confidence 79999999999999999999999999 69999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+||+|||+++....+.. ......|++.|+|||.+. +..++.++|||||||++|||++|.+||
T Consensus 134 ~~kL~DfG~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~Pf 196 (329)
T cd05618 134 HIKLTDYGMCKEGLRPGD-------TTSTFCGTPNYIAPEILR----------GEDYGFSVDWWALGVLMFEMMAGRSPF 196 (329)
T ss_pred CEEEeeCCccccccCCCC-------ccccccCCccccCHHHHc----------CCCCCCccceecccHHHHHHhhCCCCC
Confidence 999999999874322111 112346789999999775 346788999999999999999999998
Q ss_pred Cch---------HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC------HHHHHHH
Q 000470 161 ELS---------HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS------AESYLQN 211 (1472)
Q Consensus 161 ~~~---------~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps------a~elL~~ 211 (1472)
... ...............++...+..+++||.+||+.||++|++ ++++++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 197 DIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred ccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 421 01111111112222355566788999999999999999998 5789888
No 78
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=7.1e-28 Score=266.00 Aligned_cols=292 Identities=19% Similarity=0.240 Sum_probs=229.0
Q ss_pred eeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEE
Q 000470 1052 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1131 (1472)
Q Consensus 1052 ~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~ 1131 (1472)
..|++|++.|+-+.||++|+++||||.|.|+-+|++....+ ++-..+..+|..+|.-+.|+|+.+++++|+.|..+.
T Consensus 218 qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~---~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~ 294 (519)
T KOG0293|consen 218 QILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH---FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLS 294 (519)
T ss_pred hhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc---eeeeeeeecccCceEEEEECCCCCeEEecCchHhee
Confidence 46899999999999999999999999999999999875443 455678888999999999999999999999999999
Q ss_pred EEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccc
Q 000470 1132 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGY 1211 (1472)
Q Consensus 1132 vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~ 1211 (1472)
+||+++.. ....+...++..+.+++|.|| |..+++|+.|++|..||+... .....++ .....
T Consensus 295 lwDv~tgd-------------~~~~y~~~~~~S~~sc~W~pD---g~~~V~Gs~dr~i~~wdlDgn-~~~~W~g-vr~~~ 356 (519)
T KOG0293|consen 295 LWDVDTGD-------------LRHLYPSGLGFSVSSCAWCPD---GFRFVTGSPDRTIIMWDLDGN-ILGNWEG-VRDPK 356 (519)
T ss_pred eccCCcch-------------hhhhcccCcCCCcceeEEccC---CceeEecCCCCcEEEecCCcc-hhhcccc-cccce
Confidence 99998521 122333345777888899999 778999999999999999743 3333332 12356
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEc
Q 000470 1212 VSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNA 1291 (1472)
Q Consensus 1212 Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl 1291 (1472)
|.++++.+||.++++.+.|..+++++........... ...+|++.+. +. +++++++.-.+.++.+||+
T Consensus 357 v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis--e~~~its~~i-S~---------d~k~~LvnL~~qei~LWDl 424 (519)
T KOG0293|consen 357 VHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLIS--EEQPITSFSI-SK---------DGKLALVNLQDQEIHLWDL 424 (519)
T ss_pred eEEEEEcCCCcEEEEEecccceeeechhhhhhhcccc--ccCceeEEEE-cC---------CCcEEEEEcccCeeEEeec
Confidence 9999999999999999999999999998877765443 3458999888 43 4568888888999999999
Q ss_pred CCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCC-CCcEEEccC
Q 000470 1292 ENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP-GGDLLTGGT 1370 (1472)
Q Consensus 1292 ~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p-~g~llTgg~ 1370 (1472)
+....++.+.++.. ++. -|+++.-.. +.++++|++
T Consensus 425 ~e~~lv~kY~Ghkq-------------------------------------------~~f-iIrSCFgg~~~~fiaSGSE 460 (519)
T KOG0293|consen 425 EENKLVRKYFGHKQ-------------------------------------------GHF-IIRSCFGGGNDKFIASGSE 460 (519)
T ss_pred chhhHHHHhhcccc-------------------------------------------cce-EEEeccCCCCcceEEecCC
Confidence 86544444332111 010 234332222 237889999
Q ss_pred CCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEe
Q 000470 1371 DLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLG 1450 (1472)
Q Consensus 1371 Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va 1450 (1472)
|++|++|+..+++...+++| |..+|++|+
T Consensus 461 D~kvyIWhr~sgkll~~LsG---------------------------------------------------Hs~~vNcVs 489 (519)
T KOG0293|consen 461 DSKVYIWHRISGKLLAVLSG---------------------------------------------------HSKTVNCVS 489 (519)
T ss_pred CceEEEEEccCCceeEeecC---------------------------------------------------CcceeeEEe
Confidence 99999999988877665654 899999996
Q ss_pred eeecC-CcEEEEEcCCceEEEcC
Q 000470 1451 SVKLN-QRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1451 ~~~~~-~~~LvS~s~DG~IkVWk 1472 (1472)
|+|. -.|+||||+||+|+||.
T Consensus 490 -wNP~~p~m~ASasDDgtIRIWg 511 (519)
T KOG0293|consen 490 -WNPADPEMFASASDDGTIRIWG 511 (519)
T ss_pred -cCCCCHHHhhccCCCCeEEEec
Confidence 8875 78899999999999995
No 79
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.96 E-value=8.1e-29 Score=296.36 Aligned_cols=199 Identities=21% Similarity=0.297 Sum_probs=156.1
Q ss_pred CCCCCcceeeEEEEeC-----CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETD-----KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~-----~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++... ...|+||||++++|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||
T Consensus 56 l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl 135 (338)
T cd07859 56 LRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNIL 135 (338)
T ss_pred CCCCCEeeecceEeccCCCCCceEEEEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence 5899999999988543 35899999999999999988878999999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.+||+|||+++........ ........|++.|+|||.+... ...++.++|||||||++|||++
T Consensus 136 l~~~~~~kL~Dfg~~~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~--------~~~~~~~~DvwSlGvvl~el~t 203 (338)
T cd07859 136 ANADCKLKICDFGLARVAFNDTPT----AIFWTDYVATRWYRAPELCGSF--------FSKYTPAIDIWSIGCIFAEVLT 203 (338)
T ss_pred ECCCCcEEEccCccccccccccCc----cccccCCCCCCCcCCHHHHhcc--------ccccCchhHHHHHHHHHHHHHc
Confidence 999999999999998754322111 1122345688999999987421 2367889999999999999999
Q ss_pred CCCCCCchHHHHH---------------------------Hh----cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC
Q 000470 156 EVPFFELSHLLAY---------------------------RR----GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS 204 (1472)
Q Consensus 156 g~~pf~~~~~~~~---------------------------~~----~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps 204 (1472)
|++||........ .. ....+........++.+.++|.+||+.||++||+
T Consensus 204 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 283 (338)
T cd07859 204 GKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPT 283 (338)
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCC
Confidence 9999964321110 00 0000000111124567899999999999999999
Q ss_pred HHHHHHH
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~elL~~ 211 (1472)
++|+++|
T Consensus 284 ~~e~l~h 290 (338)
T cd07859 284 AEEALAD 290 (338)
T ss_pred HHHHhcC
Confidence 9999998
No 80
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.96 E-value=1.2e-26 Score=266.03 Aligned_cols=287 Identities=24% Similarity=0.397 Sum_probs=230.4
Q ss_pred eeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcE
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1130 (1472)
Q Consensus 1051 V~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I 1130 (1472)
++.+.+|.++|++++|+|+++++++|+.||.|++||..+.+ .......|...+.++.|+++++.+++++.||.|
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 75 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE------LLRTLKGHTGPVRDVAASADGTYLASGSSDKTI 75 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC------cEEEEecCCcceeEEEECCCCCEEEEEcCCCeE
Confidence 56788999999999999999999999999999999998754 334556677778899999999999999999999
Q ss_pred EEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCcc
Q 000470 1131 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1210 (1472)
Q Consensus 1131 ~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g 1210 (1472)
++|++... .....+. .+...+.++.|+++ +.++++++.+|.|.+||+++++....+.. |.+
T Consensus 76 ~i~~~~~~-------------~~~~~~~-~~~~~i~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~ 136 (289)
T cd00200 76 RLWDLETG-------------ECVRTLT-GHTSYVSSVAFSPD---GRILSSSSRDKTIKVWDVETGKCLTTLRG--HTD 136 (289)
T ss_pred EEEEcCcc-------------cceEEEe-ccCCcEEEEEEcCC---CCEEEEecCCCeEEEEECCCcEEEEEecc--CCC
Confidence 99999731 0111222 34456788889987 56888888899999999998887777764 778
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEE
Q 000470 1211 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1290 (1472)
Q Consensus 1211 ~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWD 1290 (1472)
.+++++|+|++.++++|+.+|.|.+||++.+..+..+.. +...|.++.+ +|++ ..+++++.++.|.+||
T Consensus 137 ~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~-~~~~---------~~l~~~~~~~~i~i~d 205 (289)
T cd00200 137 WVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTG-HTGEVNSVAF-SPDG---------EKLLSSSSDGTIKLWD 205 (289)
T ss_pred cEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEec-CccccceEEE-CCCc---------CEEEEecCCCcEEEEE
Confidence 899999999999999888899999999998888877763 5567888888 6654 3788888899999999
Q ss_pred cCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCCcEE-Ecc
Q 000470 1291 AENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL-TGG 1369 (1472)
Q Consensus 1291 l~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~ll-Tgg 1369 (1472)
+.+++....+. .+...+.++.|++++.++ +++
T Consensus 206 ~~~~~~~~~~~-----------------------------------------------~~~~~i~~~~~~~~~~~~~~~~ 238 (289)
T cd00200 206 LSTGKCLGTLR-----------------------------------------------GHENGVNSVAFSPDGYLLASGS 238 (289)
T ss_pred CCCCceecchh-----------------------------------------------hcCCceEEEEEcCCCcEEEEEc
Confidence 98866544432 122268899999988555 666
Q ss_pred CCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEE
Q 000470 1370 TDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSL 1449 (1472)
Q Consensus 1370 ~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~v 1449 (1472)
.|+.|++||+.+.+....+. .|...|.++
T Consensus 239 ~~~~i~i~~~~~~~~~~~~~---------------------------------------------------~~~~~i~~~ 267 (289)
T cd00200 239 EDGTIRVWDLRTGECVQTLS---------------------------------------------------GHTNSVTSL 267 (289)
T ss_pred CCCcEEEEEcCCceeEEEcc---------------------------------------------------ccCCcEEEE
Confidence 69999999987643322111 277889999
Q ss_pred eeeecCCcEEEEEcCCceEEEcC
Q 000470 1450 GSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1450 a~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+ |++++.+|++++.||.|++|+
T Consensus 268 ~-~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 268 A-WSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred E-ECCCCCEEEEecCCCeEEecC
Confidence 5 899999999999999999997
No 81
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.96 E-value=1.2e-28 Score=293.83 Aligned_cols=193 Identities=17% Similarity=0.205 Sum_probs=158.0
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++++++++...|+||||++ |+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 54 ~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~ 133 (329)
T cd05588 54 NHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG 133 (329)
T ss_pred CCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC
Confidence 69999999999999999999999999 69999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+||+|||+++....+.. ...+..|++.|+|||++. +..++.++||||+||++|||++|++||
T Consensus 134 ~~kL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~~l~el~~g~~Pf 196 (329)
T cd05588 134 HIKLTDYGMCKEGIRPGD-------TTSTFCGTPNYIAPEILR----------GEDYGFSVDWWALGVLMFEMMAGRSPF 196 (329)
T ss_pred CEEECcCccccccccCCC-------ccccccCCccccCHHHHc----------CCCCCCccceechHHHHHHHHHCCCCc
Confidence 999999999874322111 123456789999999875 346788999999999999999999999
Q ss_pred CchH--------HHH-HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC------HHHHHHH
Q 000470 161 ELSH--------LLA-YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS------AESYLQN 211 (1472)
Q Consensus 161 ~~~~--------~~~-~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps------a~elL~~ 211 (1472)
+... ... ...........++...+..+.+||.+||+.||.+|++ ++++++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 197 DIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred ccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 5311 111 1111111122345556788999999999999999997 7899988
No 82
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.96 E-value=4.7e-29 Score=295.93 Aligned_cols=194 Identities=19% Similarity=0.207 Sum_probs=160.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 55 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~ 134 (318)
T cd05582 55 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE 134 (318)
T ss_pred CCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCC
Confidence 589999999999999999999999998 6999999888789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||+++....... ......|++.|+|||.+. ...++.++|||||||++|||++|+.|
T Consensus 135 ~~~kL~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~tg~~p 197 (318)
T cd05582 135 GHIKLTDFGLSKESIDHEK-------KAYSFCGTVEYMAPEVVN----------RRGHTQSADWWSFGVLMFEMLTGSLP 197 (318)
T ss_pred CcEEEeeccCCcccCCCCC-------ceecccCChhhcCHHHHc----------CCCCCCccceeccceEeeeeccCCCC
Confidence 9999999999875422111 112346789999999775 23567899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
|..................++...++.+++||.+||+.||++||+ ++++++|
T Consensus 198 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 198 FQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence 976544333222222223345556789999999999999999999 5667766
No 83
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.96 E-value=7.5e-29 Score=294.59 Aligned_cols=194 Identities=19% Similarity=0.229 Sum_probs=159.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++++++..|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 53 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~ 132 (321)
T cd05603 53 LKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQ 132 (321)
T ss_pred CCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC
Confidence 579999999999999999999999999 6999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||+++....+.. ......|++.|+|||.+. +..++.++|||||||++|||++|.+|
T Consensus 133 ~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~p 195 (321)
T cd05603 133 GHVVLTDFGLCKEGVEPEE-------TTSTFCGTPEYLAPEVLR----------KEPYDRTVDWWCLGAVLYEMLYGLPP 195 (321)
T ss_pred CCEEEccCCCCccCCCCCC-------ccccccCCcccCCHHHhc----------CCCCCCcCcccccchhhhhhhcCCCC
Confidence 9999999998864322111 112346789999999874 34578899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHH----HHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAE----SYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~----elL~~ 211 (1472)
|...+..............++...+..+.++|.+||+.||.+|+++. |+++|
T Consensus 196 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 251 (321)
T cd05603 196 FYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNH 251 (321)
T ss_pred CCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCC
Confidence 97655444333222222334555677899999999999999999764 66665
No 84
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.96 E-value=1.4e-28 Score=291.82 Aligned_cols=193 Identities=18% Similarity=0.227 Sum_probs=161.3
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||+++++++++.+..|+||||++ |+|.+++.....+++.++..++.||+.||.|||++||+||||||+|||++.++
T Consensus 54 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~ 133 (318)
T cd05570 54 KHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG 133 (318)
T ss_pred CCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC
Confidence 69999999999999999999999999 69999998887899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++....... .....+|++.|+|||.+. +..++.++||||+||++|+|++|.+||
T Consensus 134 ~~kl~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslGvil~~l~~G~~pf 196 (318)
T cd05570 134 HIKIADFGMCKEGILGGV-------TTSTFCGTPDYIAPEILS----------YQPYGPAVDWWALGVLLYEMLAGQSPF 196 (318)
T ss_pred cEEecccCCCeecCcCCC-------cccceecCccccCHHHhc----------CCCCCcchhhhhHHHHHHHHhhCCCCC
Confidence 999999998864321111 112345788999999875 346788999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 211 (1472)
...................+...+..+++||.+||+.||++||++ .++++|
T Consensus 197 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 197 EGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 765443333222222233455667899999999999999999999 999988
No 85
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=1.1e-28 Score=294.51 Aligned_cols=195 Identities=20% Similarity=0.236 Sum_probs=160.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++++++.+...|+||||++ |+|.+++..+..+++.+++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~ 142 (332)
T cd05614 63 QSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG 142 (332)
T ss_pred CCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC
Confidence 58999999999999999999999999 69999998888899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+||+|||+++........ ......|++.|+|||.+.. ...++.++|||||||++|||++|.+||
T Consensus 143 ~~kl~DfG~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~---------~~~~~~~~DiwslG~il~elltg~~pf 207 (332)
T cd05614 143 HVVLTDFGLSKEFLSEEKE------RTYSFCGTIEYMAPEIIRG---------KGGHGKAVDWWSLGILIFELLTGASPF 207 (332)
T ss_pred CEEEeeCcCCccccccCCC------ccccccCCccccCHHHhcC---------CCCCCCccccccchhhhhhhhcCCCCC
Confidence 9999999998754221111 1123457899999998742 224678999999999999999999999
Q ss_pred Cch----HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 161 ELS----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 161 ~~~----~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
... ....+..........++...++.+++||.+||+.||++|| +++++++|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 208 TLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 532 1222222222223345556778999999999999999999 88999998
No 86
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.96 E-value=9.3e-29 Score=294.29 Aligned_cols=194 Identities=19% Similarity=0.208 Sum_probs=159.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+||||+. |+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 53 ~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~ 132 (325)
T cd05604 53 VKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQ 132 (325)
T ss_pred CCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC
Confidence 579999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||+++....... ......|++.|+|||.+. +..++.++|||||||++|||++|.+|
T Consensus 133 ~~~kL~DfG~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~G~~p 195 (325)
T cd05604 133 GHVVLTDFGLCKEGIAQSD-------TTTTFCGTPEYLAPEVIR----------KQPYDNTVDWWCLGAVLYEMLYGLPP 195 (325)
T ss_pred CCEEEeecCCcccCCCCCC-------CcccccCChhhCCHHHHc----------CCCCCCcCccccccceehhhhcCCCC
Confidence 9999999999874321111 112446789999999875 34578899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH----HHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA----ESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa----~elL~~ 211 (1472)
|..................+....+..+.++|.+||+.||.+||++ .++++|
T Consensus 196 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h 251 (325)
T cd05604 196 FYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEH 251 (325)
T ss_pred CCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcC
Confidence 9765443332222222222333456789999999999999999987 467766
No 87
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.96 E-value=7.1e-27 Score=250.19 Aligned_cols=290 Identities=16% Similarity=0.239 Sum_probs=230.6
Q ss_pred eeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcE
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1130 (1472)
Q Consensus 1051 V~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I 1130 (1472)
+-.+.+|++.|+.+.|+|+|.+||||+.|..|.+|++...+++ -.+..+|.+.|..+.|..+++.+++||.|.+|
T Consensus 40 ~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN-----~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 40 IMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCEN-----FWVLKGHSGAVMELHGMRDGSHILSCGTDKTV 114 (338)
T ss_pred hhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccc-----eeeeccccceeEeeeeccCCCEEEEecCCceE
Confidence 4457799999999999999999999999999999997654433 23455899999999999999999999999999
Q ss_pred EEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCcc
Q 000470 1131 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1210 (1472)
Q Consensus 1131 ~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g 1210 (1472)
+.||+++.. .+++.. .|...++.+. |...+..++.+++.||++++||+|+...++++++ .-
T Consensus 115 ~~wD~~tG~-------------~~rk~k-~h~~~vNs~~--p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~---ky 175 (338)
T KOG0265|consen 115 RGWDAETGK-------------RIRKHK-GHTSFVNSLD--PSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN---KY 175 (338)
T ss_pred EEEecccce-------------eeehhc-cccceeeecC--ccccCCeEEEecCCCceEEEEeecccchhhcccc---ce
Confidence 999998522 122222 3556667664 4433346888999999999999999999988865 45
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEE
Q 000470 1211 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1290 (1472)
Q Consensus 1211 ~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWD 1290 (1472)
.+++++|...+..+.+|+-|+.|++||+|.......... |..+|+.+.. +|.+. .+.+-+-|+.+.+||
T Consensus 176 qltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsG-h~DtIt~lsl-s~~gs---------~llsnsMd~tvrvwd 244 (338)
T KOG0265|consen 176 QLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSG-HADTITGLSL-SRYGS---------FLLSNSMDNTVRVWD 244 (338)
T ss_pred eEEEEEecccccceeeccccCceeeeccccCcceEEeec-ccCceeeEEe-ccCCC---------ccccccccceEEEEE
Confidence 689999999999999999999999999999888877664 7789999988 77654 677778899999999
Q ss_pred cCC----CeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCCcEE
Q 000470 1291 AEN----GSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL 1366 (1472)
Q Consensus 1291 l~t----~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~ll 1366 (1472)
++- ..|+.++..+.... ....-.++|+|++..+
T Consensus 245 ~rp~~p~~R~v~if~g~~hnf-------------------------------------------eknlL~cswsp~~~~i 281 (338)
T KOG0265|consen 245 VRPFAPSQRCVKIFQGHIHNF-------------------------------------------EKNLLKCSWSPNGTKI 281 (338)
T ss_pred ecccCCCCceEEEeecchhhh-------------------------------------------hhhcceeeccCCCCcc
Confidence 873 33466665322100 0023467899999555
Q ss_pred -EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccc
Q 000470 1367 -TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDS 1445 (1472)
Q Consensus 1367 -Tgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~ 1445 (1472)
+|+.|+.+++||.......+.+. ||.+.
T Consensus 282 ~ags~dr~vyvwd~~~r~~lyklp---------------------------------------------------Gh~gs 310 (338)
T KOG0265|consen 282 TAGSADRFVYVWDTTSRRILYKLP---------------------------------------------------GHYGS 310 (338)
T ss_pred ccccccceEEEeecccccEEEEcC---------------------------------------------------Cccee
Confidence 77779999999987655544443 49999
Q ss_pred eeEEeeeecCCcEEEEEcCCceEEE
Q 000470 1446 ILSLGSVKLNQRLLISSSRDGAIKV 1470 (1472)
Q Consensus 1446 I~~va~~~~~~~~LvS~s~DG~IkV 1470 (1472)
|+.++ |++...+|.||+.|.+|.+
T Consensus 311 vn~~~-Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 311 VNEVD-FHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred EEEee-ecCCCcEEEEeccCceeEe
Confidence 99995 9999999999999999875
No 88
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=9.2e-28 Score=263.02 Aligned_cols=293 Identities=17% Similarity=0.270 Sum_probs=219.6
Q ss_pred ccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCC
Q 000470 1097 RSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCA 1176 (1472)
Q Consensus 1097 ~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s 1176 (1472)
++...+.+|++.|.|+.|+|+|..+|+|+.|-++|+||+++.. ....-..|...|.+++|+||
T Consensus 106 rCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeT--------------p~~t~KgH~~WVlcvawsPD--- 168 (480)
T KOG0271|consen 106 RCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTET--------------PLFTCKGHKNWVLCVAWSPD--- 168 (480)
T ss_pred eeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCC--------------cceeecCCccEEEEEEECCC---
Confidence 4555678899999999999999999999999999999998521 11223467889999999999
Q ss_pred ceEEEEEeCCCeEEEEeCCCCCcc-ceeecCCCccceEEEEEcC-----CCCEEEEEeCCCcEEEEECCCCcccceEecc
Q 000470 1177 SHMFMYSTQNCGIHLWDTRSNSNT-WTLKAIPEEGYVSSLVTGP-----CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYS 1250 (1472)
Q Consensus 1177 ~~~L~~at~dg~I~iwDlrt~~~~-~~l~~~~h~g~Itsl~~sp-----~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~ 1250 (1472)
+..|++|+.||.|++||..+++++ ..|.+ |...|++++|.| ..+.|++++.||.+++||+.-+.++.....
T Consensus 169 gk~iASG~~dg~I~lwdpktg~~~g~~l~g--H~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsg- 245 (480)
T KOG0271|consen 169 GKKIASGSKDGSIRLWDPKTGQQIGRALRG--HKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSG- 245 (480)
T ss_pred cchhhccccCCeEEEecCCCCCcccccccC--cccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEecc-
Confidence 889999999999999999998775 45655 999999999976 457999999999999999999888877664
Q ss_pred ccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCC-cc------CCCcccc--cCC
Q 000470 1251 QVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDT-EM------SDLPWAF--ARP 1321 (1472)
Q Consensus 1251 ~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~-~~------~~~~~~~--~~p 1321 (1472)
|..+|++++| .. ..++++|+.|++|++|+...|.|.+.++.+..--+. .. ..-.+.. ..|
T Consensus 246 HT~~VTCvrw-GG----------~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~ 314 (480)
T KOG0271|consen 246 HTASVTCVRW-GG----------EGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKP 314 (480)
T ss_pred CccceEEEEE-cC----------CceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccC
Confidence 7789999999 32 238999999999999999999988877654321000 00 0000000 000
Q ss_pred C----------CCCCCCcccc--cc--ccccccc--c-------ccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEE
Q 000470 1322 S----------SRSNPKTDLR--RN--VNQKYRV--D-------ELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRW 1377 (1472)
Q Consensus 1322 ~----------~~~~~~~~~~--~~--~~~~~~~--~-------~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlW 1377 (1472)
. +......... +. ..+++.+ + .+...++|..-|+.+.|+||+ ++++++-|..|++|
T Consensus 315 ~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW 394 (480)
T KOG0271|consen 315 KSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLW 394 (480)
T ss_pred CChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeee
Confidence 0 0000000000 00 1122222 1 222457889999999999999 56699999999999
Q ss_pred eCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCc
Q 000470 1378 DHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQR 1457 (1472)
Q Consensus 1378 Dl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~ 1457 (1472)
|..+++-.. .++||-++|+.|| |+.|.+
T Consensus 395 ~g~tGk~la---------------------------------------------------sfRGHv~~VYqva-wsaDsR 422 (480)
T KOG0271|consen 395 DGRTGKFLA---------------------------------------------------SFRGHVAAVYQVA-WSADSR 422 (480)
T ss_pred eCCCcchhh---------------------------------------------------hhhhccceeEEEE-eccCcc
Confidence 988765432 3456999999997 999999
Q ss_pred EEEEEcCCceEEEcC
Q 000470 1458 LLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1458 ~LvS~s~DG~IkVWk 1472 (1472)
+|||||.|.++|||+
T Consensus 423 LlVS~SkDsTLKvw~ 437 (480)
T KOG0271|consen 423 LLVSGSKDSTLKVWD 437 (480)
T ss_pred EEEEcCCCceEEEEE
Confidence 999999999999996
No 89
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.96 E-value=2.7e-28 Score=275.66 Aligned_cols=295 Identities=17% Similarity=0.255 Sum_probs=235.7
Q ss_pred cceeeeccccccceeEEEEcC-CCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeC
Q 000470 1048 GILVAHLQEHCSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1126 (1472)
Q Consensus 1048 G~lV~~l~~H~~~V~~lafsp-d~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~ 1126 (1472)
.+++.++.||+..|+++.|.| .+.+|+|||.|+.|+||++-... +...+|.+|..+|.+++|+.+|..|.++|.
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~-----~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sf 278 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDR-----RCLRTFKGHRKPVRDASFNNCGTSFLSASF 278 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCc-----ceehhhhcchhhhhhhhccccCCeeeeeec
Confidence 467899999999999999999 88999999999999999997622 366789999999999999999999999999
Q ss_pred CCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecC
Q 000470 1127 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1206 (1472)
Q Consensus 1127 DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~ 1206 (1472)
|+.|++||+++ |. .....+.+.+..|+.|+|++ .+++++|+.|+.|+.||+|+++.++.+..
T Consensus 279 D~~lKlwDtET-----G~----------~~~~f~~~~~~~cvkf~pd~--~n~fl~G~sd~ki~~wDiRs~kvvqeYd~- 340 (503)
T KOG0282|consen 279 DRFLKLWDTET-----GQ----------VLSRFHLDKVPTCVKFHPDN--QNIFLVGGSDKKIRQWDIRSGKVVQEYDR- 340 (503)
T ss_pred ceeeeeecccc-----ce----------EEEEEecCCCceeeecCCCC--CcEEEEecCCCcEEEEeccchHHHHHHHh-
Confidence 99999999995 21 11223456788999999996 35999999999999999999999988876
Q ss_pred CCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000470 1207 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1286 (1472)
Q Consensus 1207 ~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V 1286 (1472)
|.+.|.++.|-++|..+++.+.|+.+++|+.+...+++....+.....-++.. +|.+ +++++=+-++.+
T Consensus 341 -hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~-~P~~---------~~~~aQs~dN~i 409 (503)
T KOG0282|consen 341 -HLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTL-HPNG---------KWFAAQSMDNYI 409 (503)
T ss_pred -hhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceec-CCCC---------CeehhhccCceE
Confidence 89999999999999999999999999999999988887766554444455555 6654 477777788888
Q ss_pred EEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCc--CCceEeccCCCC-
Q 000470 1287 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRL--LGIRSLLPLPGG- 1363 (1472)
Q Consensus 1287 ~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~V~sl~~~p~g- 1363 (1472)
.++.+.-.- + ....+.+.+|. +.-..+.|+|||
T Consensus 410 ~ifs~~~~~-----r---------------------------------------~nkkK~feGh~vaGys~~v~fSpDG~ 445 (503)
T KOG0282|consen 410 AIFSTVPPF-----R---------------------------------------LNKKKRFEGHSVAGYSCQVDFSPDGR 445 (503)
T ss_pred EEEeccccc-----c---------------------------------------cCHhhhhcceeccCceeeEEEcCCCC
Confidence 888754211 0 00011112221 123467899999
Q ss_pred cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCc
Q 000470 1364 DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHR 1443 (1472)
Q Consensus 1364 ~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 1443 (1472)
+|++|.+||++.+||.++-+... .+.+|.
T Consensus 446 ~l~SGdsdG~v~~wdwkt~kl~~---------------------------------------------------~lkah~ 474 (503)
T KOG0282|consen 446 TLCSGDSDGKVNFWDWKTTKLVS---------------------------------------------------KLKAHD 474 (503)
T ss_pred eEEeecCCccEEEeechhhhhhh---------------------------------------------------ccccCC
Confidence 77799999999999987544321 234588
Q ss_pred cceeEEeeeecC-CcEEEEEcCCceEEEcC
Q 000470 1444 DSILSLGSVKLN-QRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1444 d~I~~va~~~~~-~~~LvS~s~DG~IkVWk 1472 (1472)
..+..+. |++. ..-+||||.||.||+|+
T Consensus 475 ~~ci~v~-wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 475 QPCIGVD-WHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred cceEEEE-ecCCCcceeEecccCceeEecC
Confidence 8888884 8886 67799999999999996
No 90
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.96 E-value=5.8e-29 Score=296.26 Aligned_cols=188 Identities=24% Similarity=0.292 Sum_probs=152.4
Q ss_pred CCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC-
Q 000470 4 TPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN- 80 (1472)
Q Consensus 4 pNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~- 80 (1472)
-|||+++++|...++.|||+|.+..+||++|+.+.+ |+...++.++.||+.||.+||+.||||+||||||||+...+
T Consensus 248 ~n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r 327 (586)
T KOG0667|consen 248 YNIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKR 327 (586)
T ss_pred eeEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCc
Confidence 589999999999999999999999999999998754 88999999999999999999999999999999999998765
Q ss_pred -cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 81 -WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 81 -~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
.+||+|||++.... ..-+ +..-++.|+|||+|+ +.+|+.+.||||||||++||++|.|+
T Consensus 328 ~~vKVIDFGSSc~~~-----q~vy-----tYiQSRfYRAPEVIL----------GlpY~~~IDmWSLGCIlAEL~tG~PL 387 (586)
T KOG0667|consen 328 SRIKVIDFGSSCFES-----QRVY-----TYIQSRFYRAPEVIL----------GLPYDTAIDMWSLGCILAELFTGEPL 387 (586)
T ss_pred CceeEEecccccccC-----Ccce-----eeeeccccccchhhc----------cCCCCCccceeehhhhHHhHhcCccc
Confidence 69999999987541 1111 344567899999987 56899999999999999999999999
Q ss_pred CCchHHHH----H----------------------Hh------------------------------cCCCCC---c---
Q 000470 160 FELSHLLA----Y----------------------RR------------------------------GQYDPS---Q--- 177 (1472)
Q Consensus 160 f~~~~~~~----~----------------------~~------------------------------~~~~~~---~--- 177 (1472)
|.+++... + .. ..+... .
T Consensus 388 fpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~ 467 (586)
T KOG0667|consen 388 FPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLE 467 (586)
T ss_pred cCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccc
Confidence 96443210 0 00 000000 0
Q ss_pred -ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 178 -HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 178 -~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+....+..+.+||.+||.+||.+|+|+.|+|+|
T Consensus 468 ~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~H 502 (586)
T KOG0667|consen 468 SGLPKADDKLFIDFLKRCLEWDPAERITPAQALNH 502 (586)
T ss_pred hhcccccHHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0111234578999999999999999999999999
No 91
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.96 E-value=1.1e-26 Score=242.26 Aligned_cols=270 Identities=19% Similarity=0.270 Sum_probs=220.1
Q ss_pred CCCCcc-cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCC
Q 000470 1040 PDSGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1040 ~~~~W~-p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~ 1118 (1472)
.-..|. .+|++..+++-..+.||++...||+++||+|+.. .||++|+++...+ +..+|.+|...|+++.|..+|
T Consensus 21 TIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~q-hvRlyD~~S~np~----Pv~t~e~h~kNVtaVgF~~dg 95 (311)
T KOG0315|consen 21 TIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQ-HVRLYDLNSNNPN----PVATFEGHTKNVTAVGFQCDG 95 (311)
T ss_pred eeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCC-eeEEEEccCCCCC----ceeEEeccCCceEEEEEeecC
Confidence 456899 5799999999888999999999999999998874 6999999986632 678999998899999999999
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
+++++||+||+++|||++. +...|. ..+.++|+.+..+|+ +..|++++.+|.|++||++...
T Consensus 96 rWMyTgseDgt~kIWdlR~-------------~~~qR~--~~~~spVn~vvlhpn---QteLis~dqsg~irvWDl~~~~ 157 (311)
T KOG0315|consen 96 RWMYTGSEDGTVKIWDLRS-------------LSCQRN--YQHNSPVNTVVLHPN---QTELISGDQSGNIRVWDLGENS 157 (311)
T ss_pred eEEEecCCCceEEEEeccC-------------cccchh--ccCCCCcceEEecCC---cceEEeecCCCcEEEEEccCCc
Confidence 9999999999999999983 112222 234578899999998 6689999999999999999887
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCc------ccceEeccccCCceeEEeecCCCCCccccC
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV------PVNSWQYSQVCPIEKMCLFVPPPNAAVSTT 1272 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~------~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~ 1272 (1472)
+...+-. ...-.|.++.+.|+|..++.+...|.+.+|++-... ++..++. |..-|.++.+ +|+.+
T Consensus 158 c~~~liP-e~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~a-h~~~il~C~l-SPd~k------ 228 (311)
T KOG0315|consen 158 CTHELIP-EDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQA-HNGHILRCLL-SPDVK------ 228 (311)
T ss_pred cccccCC-CCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheec-ccceEEEEEE-CCCCc------
Confidence 7665542 345689999999999999999999999999987643 3333333 5566777777 77654
Q ss_pred CCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcC
Q 000470 1273 ARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLL 1352 (1472)
Q Consensus 1273 ~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 1352 (1472)
++++++.|.+++||+.++. .+..+. ..+|..
T Consensus 229 ---~lat~ssdktv~iwn~~~~-~kle~~---------------------------------------------l~gh~r 259 (311)
T KOG0315|consen 229 ---YLATCSSDKTVKIWNTDDF-FKLELV---------------------------------------------LTGHQR 259 (311)
T ss_pred ---EEEeecCCceEEEEecCCc-eeeEEE---------------------------------------------eecCCc
Confidence 9999999999999999886 222211 023445
Q ss_pred CceEeccCCCC-cEEEccCCCeEEEEeCCCCCCceEEeC
Q 000470 1353 GIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICG 1390 (1472)
Q Consensus 1353 ~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv~g 1390 (1472)
.++.++|+.+| +|+||+.|+.+|+||+..++......|
T Consensus 260 WvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~g 298 (311)
T KOG0315|consen 260 WVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQG 298 (311)
T ss_pred eEEeeeeccCccEEEecCCCCceeecccccCceeeecCC
Confidence 89999999998 888999999999999998887665555
No 92
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.96 E-value=1.6e-28 Score=287.24 Aligned_cols=193 Identities=24% Similarity=0.257 Sum_probs=153.4
Q ss_pred CCCCCcceeeEEEE-----eCCeEEEEecccCCcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 000470 1 MSSTPCVHKKFWQE-----TDKAAYLLRQYFFNSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73 (1472)
Q Consensus 1 l~HpNIv~~~~~~~-----~~~~~~lV~Ey~~gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeN 73 (1472)
++||||+++++++. .+...|+||||++++|.+++... ..+++.+++.++.||+.||.|||++||+||||||+|
T Consensus 61 ~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~N 140 (290)
T cd07862 61 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN 140 (290)
T ss_pred cCCCCcceEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHH
Confidence 36999999999885 34568999999999999999753 348999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHH
Q 000470 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 74 ILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 153 (1472)
||++.++.+||+|||+++..... .......+++.|+|||.+. ...++.++||||+||++|||
T Consensus 141 il~~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el 202 (290)
T cd07862 141 ILVTSSGQIKLADFGLARIYSFQ--------MALTSVVVTLWYRAPEVLL----------QSSYATPVDLWSVGCIFAEM 202 (290)
T ss_pred EEEcCCCCEEEccccceEeccCC--------cccccccccccccChHHHh----------CCCCCCccchHHHHHHHHHH
Confidence 99999999999999998754211 1123445788999999874 33578899999999999999
Q ss_pred HhCCCCCCchHH----HHHHhcCCCC-----------------------CcccCCCCCHHHHHHHHHhcccCcCCCCCHH
Q 000470 154 FLEVPFFELSHL----LAYRRGQYDP-----------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 154 ltg~~pf~~~~~----~~~~~~~~~~-----------------------~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
++|.+||..... ..+......+ ...+....++.+++||.+||+.||++|||+.
T Consensus 203 ~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~ 282 (290)
T cd07862 203 FRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY 282 (290)
T ss_pred HcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHH
Confidence 999999964322 1111110000 0011123467789999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
|+|+|
T Consensus 283 ~~l~h 287 (290)
T cd07862 283 SALSH 287 (290)
T ss_pred HHhcC
Confidence 99998
No 93
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.95 E-value=2.9e-28 Score=284.43 Aligned_cols=193 Identities=18% Similarity=0.182 Sum_probs=157.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.+++..|+||||++ |+|.+++.. ...+++.++..++.|++.||+|||++||+||||||+|||++
T Consensus 57 l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~ 136 (285)
T cd05631 57 VNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD 136 (285)
T ss_pred cCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC
Confidence 579999999999999999999999999 699888754 34589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+++.++|+|||++...... .......|+..|+|||.+. +..++.++||||+||++|||++|+
T Consensus 137 ~~~~~kl~Dfg~~~~~~~~--------~~~~~~~g~~~y~aPE~~~----------~~~~~~~~DvwslGvil~el~~g~ 198 (285)
T cd05631 137 DRGHIRISDLGLAVQIPEG--------ETVRGRVGTVGYMAPEVIN----------NEKYTFSPDWWGLGCLIYEMIQGQ 198 (285)
T ss_pred CCCCEEEeeCCCcEEcCCC--------CeecCCCCCCCccCHhhhc----------CCCCCcccCchhHHHHHHHHHhCC
Confidence 9999999999998754211 0113345789999999875 346788999999999999999999
Q ss_pred CCCCchH----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 158 PFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
+||.... ...+...........+...++.+.+||.+||+.||++||+ ++++++|
T Consensus 199 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 199 SPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred CCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 9996432 1222222222223344556789999999999999999997 8999998
No 94
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.95 E-value=1.2e-28 Score=294.01 Aligned_cols=194 Identities=22% Similarity=0.245 Sum_probs=159.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++.+++++...|+||||++ |+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 54 ~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~ 133 (330)
T cd05586 54 ESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG 133 (330)
T ss_pred CCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC
Confidence 69999999999999999999999999 69999998888899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++....... .....+|++.|+|||.+.. ...++.++||||+||++|||++|..||
T Consensus 134 ~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~---------~~~~~~~~DvwslGvil~elltG~~Pf 197 (330)
T cd05586 134 HIALCDFGLSKANLTDNK-------TTNTFCGTTEYLAPEVLLD---------EKGYTKHVDFWSLGVLVFEMCCGWSPF 197 (330)
T ss_pred CEEEecCCcCcCCCCCCC-------CccCccCCccccCHHHHcC---------CCCCCCccceeccccEEEEeccCCCCC
Confidence 999999999875322111 1234568999999998742 224688999999999999999998888
Q ss_pred CchHHHHHHhcCCCCCcccC-CCCCHHHHHHHHHhcccCcCCCC----CHHHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLE-KIPDSGIRKMILHMIQLEPELRF----SAESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~-~~~~~~l~~LI~~mL~~dP~~Rp----sa~elL~~ 211 (1472)
.........+........++ ...++.+++||.+||+.||++|| +++++++|
T Consensus 198 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 198 YAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred CCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 76544333222111111122 24578899999999999999998 68999988
No 95
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.95 E-value=2.1e-28 Score=285.67 Aligned_cols=195 Identities=23% Similarity=0.349 Sum_probs=153.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLS-TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~-~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+||||+++++.+.+. ....+++..++.++.||+.||.|||+.||+||||||+||+++.+
T Consensus 57 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~ 136 (287)
T cd07848 57 LKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHN 136 (287)
T ss_pred CCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC
Confidence 57999999999999999999999999975555554 34568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||.++....... .......+++.|+|||.+. +..++.++||||+||++|||++|++|
T Consensus 137 ~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslGvil~el~~g~~p 200 (287)
T cd07848 137 DVLKLCDFGFARNLSEGSN------ANYTEYVATRWYRSPELLL----------GAPYGKAVDMWSVGCILGELSDGQPL 200 (287)
T ss_pred CcEEEeeccCccccccccc------ccccccccccccCCcHHHc----------CCCCCCchhHHhHHHHHHHHHhCCCC
Confidence 9999999999876422111 1112345788999999874 33578899999999999999999999
Q ss_pred CCchHH----HHHHhcC----------------CC----CC--------cccCCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 000470 160 FELSHL----LAYRRGQ----------------YD----PS--------QHLEKIPDSGIRKMILHMIQLEPELRFSAES 207 (1472)
Q Consensus 160 f~~~~~----~~~~~~~----------------~~----~~--------~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~e 207 (1472)
|..... ..+.... .. +. .......+..+++||.+||++||++|||++|
T Consensus 201 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~ 280 (287)
T cd07848 201 FPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQ 280 (287)
T ss_pred CCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHH
Confidence 964321 1111100 00 00 0011234677999999999999999999999
Q ss_pred HHHH
Q 000470 208 YLQN 211 (1472)
Q Consensus 208 lL~~ 211 (1472)
+|+|
T Consensus 281 ~l~h 284 (287)
T cd07848 281 CLNH 284 (287)
T ss_pred HhcC
Confidence 9998
No 96
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.95 E-value=2.8e-28 Score=291.23 Aligned_cols=191 Identities=21% Similarity=0.210 Sum_probs=159.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+||||++ |+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 58 ~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~ 137 (333)
T cd05600 58 TKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDAS 137 (333)
T ss_pred CCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC
Confidence 479999999999999999999999998 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++.... ......|++.|+|||.+. +..++.++|||||||++|||++|.+|
T Consensus 138 ~~~kL~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~ell~g~~p 197 (333)
T cd05600 138 GHIKLTDFGLSKGIVT----------YANSVVGSPDYMAPEVLR----------GKGYDFTVDYWSLGCMLYEFLCGFPP 197 (333)
T ss_pred CCEEEEeCcCCccccc----------ccCCcccCccccChhHhc----------CCCCCCccceecchHHHhhhhhCCCC
Confidence 9999999999875421 123456789999999875 33678899999999999999999999
Q ss_pred CCchHHHHH----HhcCCCC-CcccC---CCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAY----RRGQYDP-SQHLE---KIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~----~~~~~~~-~~~l~---~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|........ ....... .+... ...++++.+||.+||..+|++||+++|+++|
T Consensus 198 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 198 FSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 975543221 1111111 11111 1346789999999999999999999999998
No 97
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.95 E-value=3.6e-28 Score=289.36 Aligned_cols=193 Identities=19% Similarity=0.208 Sum_probs=157.6
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||+++++++++....|+||||++ |+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 54 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~ 133 (327)
T cd05617 54 SNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG 133 (327)
T ss_pred CCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC
Confidence 69999999999999999999999998 69999998777899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+||+|||+++....... ...+.+|++.|+|||.+. +..++.++|||||||++|||++|.+||
T Consensus 134 ~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~ell~g~~pf 196 (327)
T cd05617 134 HIKLTDYGMCKEGLGPGD-------TTSTFCGTPNYIAPEILR----------GEEYGFSVDWWALGVLMFEMMAGRSPF 196 (327)
T ss_pred CEEEeccccceeccCCCC-------ceecccCCcccCCHHHHC----------CCCCCchheeehhHHHHHHHHhCCCCC
Confidence 999999998874322111 123456889999999875 346788999999999999999999999
Q ss_pred Cch-------HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC------HHHHHHH
Q 000470 161 ELS-------HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS------AESYLQN 211 (1472)
Q Consensus 161 ~~~-------~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps------a~elL~~ 211 (1472)
... ...............++...+..+.++|.+||+.||++|++ ++++++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 197 DIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred CccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 521 11111111111222355566788999999999999999998 4688887
No 98
>PHA02988 hypothetical protein; Provisional
Probab=99.95 E-value=4.7e-28 Score=282.27 Aligned_cols=196 Identities=16% Similarity=0.027 Sum_probs=159.3
Q ss_pred CCCCCcceeeEEEEe----CCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQET----DKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~----~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNI 74 (1472)
++||||+++++++.+ ....|+||||++ |+|.+++..++.+++..+..++.|++.||.|||+ .+++||||||+||
T Consensus 75 l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~ni 154 (283)
T PHA02988 75 IDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSF 154 (283)
T ss_pred cCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhE
Confidence 589999999999877 347899999999 6999999988889999999999999999999998 5999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
|++.++.+||+|||+++....+. ....++..|+|||.+... ...++.++|||||||++|||+
T Consensus 155 ll~~~~~~kl~dfg~~~~~~~~~----------~~~~~~~~y~aPE~~~~~--------~~~~~~k~Di~SlGvil~el~ 216 (283)
T PHA02988 155 LVTENYKLKIICHGLEKILSSPP----------FKNVNFMVYFSYKMLNDI--------FSEYTIKDDIYSLGVVLWEIF 216 (283)
T ss_pred EECCCCcEEEcccchHhhhcccc----------ccccCcccccCHHHhhhc--------cccccchhhhhHHHHHHHHHH
Confidence 99999999999999987542110 123467889999987521 246889999999999999999
Q ss_pred hCCCCCCchHHHHHHhcC--CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 155 LEVPFFELSHLLAYRRGQ--YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 155 tg~~pf~~~~~~~~~~~~--~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
+|+.||............ ......++...++.+++|+.+||+.||++|||+.|+++.+..
T Consensus 217 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~ 278 (283)
T PHA02988 217 TGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSL 278 (283)
T ss_pred HCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence 999999755433221111 112223444467889999999999999999999999988653
No 99
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.95 E-value=3.4e-28 Score=289.30 Aligned_cols=192 Identities=17% Similarity=0.171 Sum_probs=158.1
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCc
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW 81 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~ 81 (1472)
|++|+++++++.++...|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.+|.
T Consensus 60 ~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~ 139 (324)
T cd05587 60 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGH 139 (324)
T ss_pred CCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCC
Confidence 3568889999999999999999999 699999988888999999999999999999999999999999999999999999
Q ss_pred EEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 000470 82 LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE 161 (1472)
Q Consensus 82 vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~ 161 (1472)
++|+|||+++....... ......|++.|+|||.+. +..++.++||||+||++|||++|++||.
T Consensus 140 ~kL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~elltG~~pf~ 202 (324)
T cd05587 140 IKIADFGMCKENIFGGK-------TTRTFCGTPDYIAPEIIA----------YQPYGKSVDWWAFGVLLYEMLAGQPPFD 202 (324)
T ss_pred EEEeecCcceecCCCCC-------ceeeecCCccccChhhhc----------CCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence 99999998864321111 123446789999999875 3457889999999999999999999997
Q ss_pred chHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHH
Q 000470 162 LSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 211 (1472)
Q Consensus 162 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 211 (1472)
.................++...++.+.++|.+||..||.+|+++ +++++|
T Consensus 203 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 203 GEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 55433332222222334555677899999999999999999976 788877
No 100
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.95 E-value=1.4e-28 Score=295.83 Aligned_cols=200 Identities=20% Similarity=0.260 Sum_probs=159.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ ++|.+++..+..+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~ 137 (350)
T cd05573 58 ADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDAD 137 (350)
T ss_pred cCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC
Confidence 579999999999999999999999998 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCC----------------------CCCceeeccCCCCccccCcccccccCCccccccCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDP----------------------SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPL 137 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~----------------------~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~ 137 (1472)
+.+||+|||+++......... ...........|++.|+|||.+. +..+
T Consensus 138 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----------~~~~ 207 (350)
T cd05573 138 GHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLR----------GTPY 207 (350)
T ss_pred CCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHc----------CCCC
Confidence 999999999987654322000 00011123456789999999875 3367
Q ss_pred CccchHHHHHHHHHHHHhCCCCCCchHHHHHHhcCCC--CCcccCC--CCCHHHHHHHHHhcccCcCCCCC-HHHHHHH
Q 000470 138 KPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYD--PSQHLEK--IPDSGIRKMILHMIQLEPELRFS-AESYLQN 211 (1472)
Q Consensus 138 t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~--~~~~l~~--~~~~~l~~LI~~mL~~dP~~Rps-a~elL~~ 211 (1472)
+.++|||||||++|||++|++||.............. ....++. ..++.+++||.+||. ||.+|++ ++|+++|
T Consensus 208 ~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 208 GLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 8999999999999999999999865543222111111 1111222 247889999999997 9999999 9999998
No 101
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.95 E-value=2.8e-28 Score=289.91 Aligned_cols=193 Identities=17% Similarity=0.157 Sum_probs=159.7
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
.||+|+++++++++++..|+||||++ |+|.+++.....+++.++..++.||+.||+|||++||+||||||+|||++.++
T Consensus 59 ~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~ 138 (323)
T cd05616 59 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG 138 (323)
T ss_pred CCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC
Confidence 58999999999999999999999999 69999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+||+|||+++...... .......|++.|+|||.+. ...++.++|||||||++|||++|++||
T Consensus 139 ~~kL~DfG~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~elltg~~Pf 201 (323)
T cd05616 139 HIKIADFGMCKENMWDG-------VTTKTFCGTPDYIAPEIIA----------YQPYGKSVDWWAFGVLLYEMLAGQAPF 201 (323)
T ss_pred cEEEccCCCceecCCCC-------CccccCCCChhhcCHHHhc----------CCCCCCccchhchhHHHHHHHhCCCCC
Confidence 99999999987432111 1123456789999999875 346789999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 211 (1472)
..................++...+.++++|+.+||+.||++|+++ .++++|
T Consensus 202 ~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 202 EGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred CCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 765443332222222233455667899999999999999999984 777776
No 102
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.95 E-value=3.9e-28 Score=293.75 Aligned_cols=200 Identities=18% Similarity=0.183 Sum_probs=158.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 58 l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~ 137 (364)
T cd05599 58 ADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAK 137 (364)
T ss_pred CCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC
Confidence 579999999999999999999999998 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCC-------------------------------ceeeccCCCCccccCcccccccCCc
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDF-------------------------------SFFFDTGGKRLCYLAPERFYEHGGE 128 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~-------------------------------~~~~~~~~gt~~Y~APE~~~~~~~~ 128 (1472)
|.++|+|||+++............ .....+..||+.|+|||++.
T Consensus 138 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----- 212 (364)
T cd05599 138 GHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFL----- 212 (364)
T ss_pred CCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHc-----
Confidence 999999999987542211100000 00111345899999999875
Q ss_pred cccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHHH----HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC
Q 000470 129 MQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS 204 (1472)
Q Consensus 129 ~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps 204 (1472)
...++.++|||||||++|||++|.+||........ ...............++.+++||.+||. +|.+|++
T Consensus 213 -----~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~ 286 (364)
T cd05599 213 -----QTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLG 286 (364)
T ss_pred -----CCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCC
Confidence 33578899999999999999999999975443222 1111111111112356789999999996 9999998
Q ss_pred ---HHHHHHH
Q 000470 205 ---AESYLQN 211 (1472)
Q Consensus 205 ---a~elL~~ 211 (1472)
++|+++|
T Consensus 287 ~~~~~~ll~h 296 (364)
T cd05599 287 NNGVNEIKSH 296 (364)
T ss_pred CCCHHHHhcC
Confidence 9999998
No 103
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=5.5e-28 Score=295.00 Aligned_cols=203 Identities=20% Similarity=0.157 Sum_probs=159.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
|+||||+++++++..+...|++|||+.++|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 143 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~ 222 (392)
T PHA03207 143 ISHRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE 222 (392)
T ss_pred cCCCCccceeeeEeeCCEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC
Confidence 68999999999999999999999999999999997777899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++........+ ......|++.|+|||++. ...++.++|||||||++|||++|+.||
T Consensus 223 ~~~l~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslGvil~el~~g~~pf 287 (392)
T PHA03207 223 NAVLGDFGAACKLDAHPDTP-----QCYGWSGTLETNSPELLA----------LDPYCAKTDIWSAGLVLFEMSVKNVTL 287 (392)
T ss_pred CEEEccCccccccCcccccc-----cccccccccCccCHhHhc----------CCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 99999999987553221111 112345789999999875 346788999999999999999997777
Q ss_pred CchH-------HHHHHhc-----------------------CC--CCCcccC-----CCCCHHHHHHHHHhcccCcCCCC
Q 000470 161 ELSH-------LLAYRRG-----------------------QY--DPSQHLE-----KIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 161 ~~~~-------~~~~~~~-----------------------~~--~~~~~l~-----~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
.... +..+.+. .. .+....+ ...+.+++++|.+||..||++||
T Consensus 288 ~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rp 367 (392)
T PHA03207 288 FGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRP 367 (392)
T ss_pred CCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCC
Confidence 4221 1111110 00 0000011 12356789999999999999999
Q ss_pred CHHHHHHHhhcccCC
Q 000470 204 SAESYLQNYAAVVFP 218 (1472)
Q Consensus 204 sa~elL~~~~~~~fp 218 (1472)
++.|+|.|.+....|
T Consensus 368 sa~e~l~~p~f~~~~ 382 (392)
T PHA03207 368 SAQDILSLPLFTKEP 382 (392)
T ss_pred CHHHHhhCchhhccc
Confidence 999999994333333
No 104
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.95 E-value=1.8e-26 Score=284.85 Aligned_cols=297 Identities=21% Similarity=0.325 Sum_probs=239.1
Q ss_pred cceeeecccc-ccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeC
Q 000470 1048 GILVAHLQEH-CSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1126 (1472)
Q Consensus 1048 G~lV~~l~~H-~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~ 1126 (1472)
-.+...+..| ..+|+++.|+++|+++++++.|+.+++|+...... .......+|...|.+++|+|++..+++|+.
T Consensus 148 ~~~~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~----~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~ 223 (456)
T KOG0266|consen 148 FSLEQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS----NLLRELSGHTRGVSDVAFSPDGSYLLSGSD 223 (456)
T ss_pred ceeeeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc----hhhccccccccceeeeEECCCCcEEEEecC
Confidence 3357777776 68999999999999999999999999999965442 122334678888999999999999999999
Q ss_pred CCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecC
Q 000470 1127 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1206 (1472)
Q Consensus 1127 DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~ 1206 (1472)
|++|++||+.... ...+....|...+.+++|+|. ++.+++|+.|++|++||++++++...+..
T Consensus 224 D~tiriwd~~~~~-------------~~~~~l~gH~~~v~~~~f~p~---g~~i~Sgs~D~tvriWd~~~~~~~~~l~~- 286 (456)
T KOG0266|consen 224 DKTLRIWDLKDDG-------------RNLKTLKGHSTYVTSVAFSPD---GNLLVSGSDDGTVRIWDVRTGECVRKLKG- 286 (456)
T ss_pred CceEEEeeccCCC-------------eEEEEecCCCCceEEEEecCC---CCEEEEecCCCcEEEEeccCCeEEEeeec-
Confidence 9999999994210 122233367777899999999 67999999999999999999999999987
Q ss_pred CCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--ccceEeccccC-CceeEEeecCCCCCccccCCCCEEEEEEcC
Q 000470 1207 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV--PVNSWQYSQVC-PIEKMCLFVPPPNAAVSTTARPLIYVAAGC 1283 (1472)
Q Consensus 1207 ~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~--~i~s~~~~~~~-~I~~l~~~~p~~~~~~~~~~~~~l~vas~d 1283 (1472)
|.+.|++++|+++++.|++++.||.|++||+..+. +++........ +++.+.| +|++. ++++++.|
T Consensus 287 -hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~f-sp~~~---------~ll~~~~d 355 (456)
T KOG0266|consen 287 -HSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQF-SPNGK---------YLLSASLD 355 (456)
T ss_pred -cCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEE-CCCCc---------EEEEecCC
Confidence 89999999999999999999999999999999998 55555544433 6788888 77655 89999999
Q ss_pred CeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC
Q 000470 1284 NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG 1363 (1472)
Q Consensus 1284 g~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g 1363 (1472)
+.+.+||+..+.+...+..+... ...+.+....++|
T Consensus 356 ~~~~~w~l~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~ 391 (456)
T KOG0266|consen 356 RTLKLWDLRSGKSVGTYTGHSNL--------------------------------------------VRCIFSPTLSTGG 391 (456)
T ss_pred CeEEEEEccCCcceeeecccCCc--------------------------------------------ceeEecccccCCC
Confidence 99999999999988887643320 0022333334566
Q ss_pred -cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCC
Q 000470 1364 -DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCH 1442 (1472)
Q Consensus 1364 -~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H 1442 (1472)
++++|+.|+.|++||+.++.....+. +|
T Consensus 392 ~~i~sg~~d~~v~~~~~~s~~~~~~l~---------------------------------------------------~h 420 (456)
T KOG0266|consen 392 KLIYSGSEDGSVYVWDSSSGGILQRLE---------------------------------------------------GH 420 (456)
T ss_pred CeEEEEeCCceEEEEeCCccchhhhhc---------------------------------------------------CC
Confidence 77799999999999998755433222 37
Q ss_pred -ccceeEEeeeecCCcEEEEEc--CCceEEEcC
Q 000470 1443 -RDSILSLGSVKLNQRLLISSS--RDGAIKVWK 1472 (1472)
Q Consensus 1443 -~d~I~~va~~~~~~~~LvS~s--~DG~IkVWk 1472 (1472)
...|.+++ +++...++++++ .|+.|++|+
T Consensus 421 ~~~~~~~~~-~~~~~~~~~s~s~~~d~~~~~w~ 452 (456)
T KOG0266|consen 421 SKAAVSDLS-SHPTENLIASSSFEGDGLIRLWK 452 (456)
T ss_pred CCCceeccc-cCCCcCeeeecCcCCCceEEEec
Confidence 77888885 899999999998 799999996
No 105
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.95 E-value=1.2e-28 Score=265.42 Aligned_cols=198 Identities=23% Similarity=0.291 Sum_probs=159.2
Q ss_pred CCCCCcceeeEEEEe-CCeEEEEecccCCcHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQET-DKAAYLLRQYFFNSLRDRLST-----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~-~~~~~lV~Ey~~gsL~d~l~~-----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
|.||||+.+..+|.+ ++.+||++||.+.+|++.|+- ...++...++.|++||+.|+.|||++=|+||||||.||
T Consensus 84 l~h~nvi~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNI 163 (438)
T KOG0666|consen 84 LKHPNVISLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANI 163 (438)
T ss_pred hcCCcchhHHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceE
Confidence 589999999999977 899999999999999999953 23589999999999999999999999999999999999
Q ss_pred EEccC----CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 75 LVTSW----NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 75 Lv~~~----~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
||..+ |.|||+|||+++.+..|...- +-.+...-|.+|+|||.+.+. ..||++.|||+.|||+
T Consensus 164 lvmgdgperG~VKIaDlGlaR~~~~plkpl----~s~d~VVVTiWYRAPELLLGa---------~hYT~AiDvWAiGCIf 230 (438)
T KOG0666|consen 164 LVMGDGPERGRVKIADLGLARLFNNPLKPL----ASLDPVVVTIWYRAPELLLGA---------RHYTKAIDVWAIGCIF 230 (438)
T ss_pred EEeccCCccCeeEeecccHHHHhhcccccc----ccCCceEEEEEecChHHhccc---------ccccchhhhHHHHHHH
Confidence 99988 899999999999876554322 223445568999999998743 4789999999999999
Q ss_pred HHHHhCCCCCCch-------------HHHHHHh----------------------------cCCCCC-----cccCCCCC
Q 000470 151 AELFLEVPFFELS-------------HLLAYRR----------------------------GQYDPS-----QHLEKIPD 184 (1472)
Q Consensus 151 ~eLltg~~pf~~~-------------~~~~~~~----------------------------~~~~~~-----~~l~~~~~ 184 (1472)
+||++-+|.|.+. ++..+.. ..+... ....++.+
T Consensus 231 aElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~ 310 (438)
T KOG0666|consen 231 AELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKD 310 (438)
T ss_pred HHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCC
Confidence 9999988877432 2222111 111110 01122345
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 185 SGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 185 ~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+...+|+.+||.+||.+|+|++|+|+|
T Consensus 311 ~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 311 PSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred chHHHHHHHHhccCchhhccHHHHhcc
Confidence 568899999999999999999999999
No 106
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.95 E-value=6e-28 Score=292.22 Aligned_cols=198 Identities=18% Similarity=0.200 Sum_probs=159.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 100 ~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~ 178 (370)
T cd05596 100 ANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS 178 (370)
T ss_pred CCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCC
Confidence 579999999999999999999999998 6999998765 48999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||.++...... .....+..|++.|+|||.+.... ....++.++|||||||++|||++|.+|
T Consensus 179 ~~~kL~DfG~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~------~~~~~~~~~DiwSlGvilyelltG~~P 246 (370)
T cd05596 179 GHLKLADFGTCMKMDANG------MVRCDTAVGTPDYISPEVLKSQG------GDGYYGRECDWWSVGVFLYEMLVGDTP 246 (370)
T ss_pred CCEEEEeccceeeccCCC------cccCCCCCCCcCeECHHHhccCC------CCCCCCCceeeeehhHHHHHHHhCCCC
Confidence 999999999987542111 11123456899999999886321 133578999999999999999999999
Q ss_pred CCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHH
Q 000470 160 FELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 211 (1472)
|....... +...............+..+++||.+||+.+|++ |++++|+++|
T Consensus 247 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 247 FYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred cCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 97654322 2222211111112245788999999999999988 9999999998
No 107
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.95 E-value=1.1e-27 Score=285.77 Aligned_cols=192 Identities=17% Similarity=0.126 Sum_probs=156.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ |+|.+++.....+++..+..++.|++.||.|||++ +|+||||||+|||++.
T Consensus 60 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~ 139 (331)
T cd06649 60 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS 139 (331)
T ss_pred CCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcC
Confidence 589999999999999999999999999 59999998877899999999999999999999986 6999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||+++..... ......|++.|+|||.+. +..++.++|||||||++|||++|+.
T Consensus 140 ~~~~kl~Dfg~~~~~~~~---------~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~tg~~ 200 (331)
T cd06649 140 RGEIKLCDFGVSGQLIDS---------MANSFVGTRSYMSPERLQ----------GTHYSVQSDIWSMGLSLVELAIGRY 200 (331)
T ss_pred CCcEEEccCccccccccc---------ccccCCCCcCcCCHhHhc----------CCCCCchHhHHHHHHHHHHHHhCCC
Confidence 999999999988754211 112345788999999774 3467889999999999999999999
Q ss_pred CCCchHHHHHHhcCC-----------------------------------------------CCCccc-CCCCCHHHHHH
Q 000470 159 FFELSHLLAYRRGQY-----------------------------------------------DPSQHL-EKIPDSGIRKM 190 (1472)
Q Consensus 159 pf~~~~~~~~~~~~~-----------------------------------------------~~~~~l-~~~~~~~l~~L 190 (1472)
||.......+..... ...+.. ....++++++|
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 280 (331)
T cd06649 201 PIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEF 280 (331)
T ss_pred CCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHH
Confidence 986433222211000 000001 11346789999
Q ss_pred HHHhcccCcCCCCCHHHHHHH
Q 000470 191 ILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 191 I~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.+||++||++||+++|+++|
T Consensus 281 i~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 281 VNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred HHHHccCCcccCCCHHHHhcC
Confidence 999999999999999999998
No 108
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.95 E-value=1.3e-27 Score=288.95 Aligned_cols=200 Identities=21% Similarity=0.225 Sum_probs=155.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.++++...|+||||++ |+|.+++..++.+++.+++.++.|++.||+|||++||+||||||+|||++.+
T Consensus 58 ~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~ 137 (363)
T cd05628 58 ADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSK 137 (363)
T ss_pred CCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCC
Confidence 579999999999999999999999999 6999999988889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCC----------CCCCc------------------eeeccCCCCccccCcccccccCCcccc
Q 000470 80 NWLYLSDFASFKPTYIPYDD----------PSDFS------------------FFFDTGGKRLCYLAPERFYEHGGEMQV 131 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~----------~~~~~------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~ 131 (1472)
+.+||+|||+++........ +.++. ....+.+||+.|+|||++.
T Consensus 138 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~-------- 209 (363)
T cd05628 138 GHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFM-------- 209 (363)
T ss_pred CCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHc--------
Confidence 99999999998754211100 00000 0012346899999999875
Q ss_pred ccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHHHHhcCC--CCCcccCC--CCCHHHHHHHHHhcccCcC---CCCC
Q 000470 132 AQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY--DPSQHLEK--IPDSGIRKMILHMIQLEPE---LRFS 204 (1472)
Q Consensus 132 ~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~--~~~~~l~~--~~~~~l~~LI~~mL~~dP~---~Rps 204 (1472)
+..++.++|||||||++|||++|.+||............. .....++. ..++++++||.+|+. +|+ .||+
T Consensus 210 --~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~ 286 (363)
T cd05628 210 --QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPG 286 (363)
T ss_pred --CCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCC
Confidence 3467889999999999999999999997544332211111 11111121 246789999999875 455 4589
Q ss_pred HHHHHHH
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~elL~~ 211 (1472)
++|+++|
T Consensus 287 ~~ei~~h 293 (363)
T cd05628 287 VEEIKTN 293 (363)
T ss_pred HHHHhCC
Confidence 9999998
No 109
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.95 E-value=7.8e-28 Score=285.30 Aligned_cols=198 Identities=22% Similarity=0.292 Sum_probs=150.2
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccCCcHHHHHhCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFFNSLRDRLSTP---------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~gsL~d~l~~~---------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DL 69 (1472)
++||||+++++++.. +...|++|||++++|.+++... ..+++.+++.++.||+.||+|||++||+||||
T Consensus 55 l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDl 134 (317)
T cd07868 55 LKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDL 134 (317)
T ss_pred cCCCCCcceeeeEecCCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCC
Confidence 589999999999854 5678999999999999987531 24899999999999999999999999999999
Q ss_pred CCCCEEE----ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHH
Q 000470 70 KCENVLV----TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFA 145 (1472)
Q Consensus 70 KpeNILv----~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwS 145 (1472)
||+|||+ +..+.+||+|||+++....+... ........+++.|+|||.+.. ...++.++||||
T Consensus 135 kp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~---------~~~~~~~~Diws 201 (317)
T cd07868 135 KPANILVMGEGPERGRVKIADMGFARLFNSPLKP----LADLDPVVVTFWYRAPELLLG---------ARHYTKAIDIWA 201 (317)
T ss_pred CHHHEEEecCCCCcCcEEEeecCceeccCCCCcc----ccccCCccccccccCCHHHcC---------CCCcCchhhHHH
Confidence 9999999 45578999999998755322111 111234567899999998752 235788999999
Q ss_pred HHHHHHHHHhCCCCCCchH-------------HHHHHhc----------------------------CCCCCc------c
Q 000470 146 VGCVIAELFLEVPFFELSH-------------LLAYRRG----------------------------QYDPSQ------H 178 (1472)
Q Consensus 146 lG~il~eLltg~~pf~~~~-------------~~~~~~~----------------------------~~~~~~------~ 178 (1472)
+||++|||++|++||...+ +..+... ...... .
T Consensus 202 lG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (317)
T cd07868 202 IGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEK 281 (317)
T ss_pred HHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHh
Confidence 9999999999999985321 1111000 000000 0
Q ss_pred cCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 179 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 179 l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.....+..+.+||.+||+.||++|||++|+|+|
T Consensus 282 ~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 282 HKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred cCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 011234578999999999999999999999998
No 110
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.95 E-value=8.8e-28 Score=287.58 Aligned_cols=196 Identities=15% Similarity=0.190 Sum_probs=153.9
Q ss_pred CCCCcceeeEEEEeC-CeEEEEecccC-CcHHHHHhCC------------------------------------------
Q 000470 2 SSTPCVHKKFWQETD-KAAYLLRQYFF-NSLRDRLSTP------------------------------------------ 37 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~-~~~~lV~Ey~~-gsL~d~l~~~------------------------------------------ 37 (1472)
+||||+++++++... ..+|+||||++ |+|.+++...
T Consensus 69 ~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (338)
T cd05102 69 NHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSR 148 (338)
T ss_pred cCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccc
Confidence 799999999988764 46899999999 7999998642
Q ss_pred --------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEEeccccccccCCC
Q 000470 38 --------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 97 (1472)
Q Consensus 38 --------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~ 97 (1472)
..+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~ 228 (338)
T cd05102 149 FQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP 228 (338)
T ss_pred cccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCc
Confidence 237788899999999999999999999999999999999999999999999987542111
Q ss_pred CCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCchHH----HHHHhcC
Q 000470 98 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL----LAYRRGQ 172 (1472)
Q Consensus 98 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~----~~~~~~~ 172 (1472)
. .....+..+++.|+|||.+. +..++.++|||||||++|||++ |.+||..... .......
T Consensus 229 ~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~ 293 (338)
T cd05102 229 D-----YVRKGSARLPLKWMAPESIF----------DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDG 293 (338)
T ss_pred c-----hhcccCCCCCccccCcHHhh----------cCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcC
Confidence 0 01112334567899999774 3467889999999999999997 8999975321 1111111
Q ss_pred CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 173 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 173 ~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.....+...++.+++|+.+||+.||++||++.|+++.++.
T Consensus 294 --~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~ 333 (338)
T cd05102 294 --TRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGD 333 (338)
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1122345667889999999999999999999999987653
No 111
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.95 E-value=1.2e-27 Score=278.57 Aligned_cols=194 Identities=16% Similarity=0.152 Sum_probs=158.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||++++++++.+...|+||||++ |+|.+++. ..+.+++.+++.++.||+.||+|||++||+||||||+||+
T Consensus 50 l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil 129 (280)
T cd05608 50 VHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVL 129 (280)
T ss_pred CCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 579999999999999999999999999 69988774 2356899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||.++....... ......|++.|+|||.+. +..++.++||||+||++|||++
T Consensus 130 i~~~~~~~l~dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~ 192 (280)
T cd05608 130 LDNDGNVRISDLGLAVELKDGQS-------KTKGYAGTPGFMAPELLQ----------GEEYDFSVDYFALGVTLYEMIA 192 (280)
T ss_pred ECCCCCEEEeeCccceecCCCCc-------cccccCCCcCccCHHHhc----------CCCCCccccHHHHHHHHHHHHh
Confidence 99999999999999875422111 112345788999999875 3467889999999999999999
Q ss_pred CCCCCCchH----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 156 EVPFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|+.||.... ...............+...++.+++++.+||+.||++|| +++++++|
T Consensus 193 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 193 ARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 999996432 122222222223334455678899999999999999999 88999998
No 112
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-28 Score=302.90 Aligned_cols=203 Identities=24% Similarity=0.241 Sum_probs=164.1
Q ss_pred CCCCcceeeE-EEEeC------CeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCC
Q 000470 2 SSTPCVHKKF-WQETD------KAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGDI 69 (1472)
Q Consensus 2 ~HpNIv~~~~-~~~~~------~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~g--IvH~DL 69 (1472)
+|||||.|++ ..... ..++|.||||+ |.|.|++.+| ..|++.|+..|++|+++|+.+||..+ ||||||
T Consensus 93 gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDL 172 (738)
T KOG1989|consen 93 GHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDL 172 (738)
T ss_pred CCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhh
Confidence 6999999999 33221 25789999999 6999999853 45999999999999999999999998 999999
Q ss_pred CCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeec--cCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFD--TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~--~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
|-||||++.+|..||||||++.....+.....+..+.-+ ..--|+.|+|||++. +..+.++++|+|||+||
T Consensus 173 KiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMID-------lysg~pI~eKsDIWALG 245 (738)
T KOG1989|consen 173 KIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMID-------LYSGLPIGEKSDIWALG 245 (738)
T ss_pred hhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHh-------hhcCCCCcchhHHHHHH
Confidence 999999999999999999998654433322222221111 112388999999986 34567899999999999
Q ss_pred HHHHHHHhCCCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 148 CVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 148 ~il~eLltg~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|+||-|+....||+......+..+.|...+. ...+..+++||+.||+.||++||++.|++.++.
T Consensus 246 clLYkLCy~t~PFe~sg~laIlng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~ 309 (738)
T KOG1989|consen 246 CLLYKLCYFTTPFEESGKLAILNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF 309 (738)
T ss_pred HHHHHHHHhCCCcCcCcceeEEeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 9999999999999988666777777764432 345578999999999999999999999998853
No 113
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.1e-28 Score=287.27 Aligned_cols=187 Identities=22% Similarity=0.317 Sum_probs=157.5
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE-ccC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV-TSW 79 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv-~~~ 79 (1472)
+||||+++++.++++.+.|+|||++.| -|.+++...+... .++..|+.||+.|+.|||++||+||||||+|||+ ++.
T Consensus 374 ~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~ 452 (612)
T KOG0603|consen 374 DHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSA 452 (612)
T ss_pred CCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCC
Confidence 699999999999999999999999994 7888887776555 8888999999999999999999999999999999 588
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|+++|+|||.++..... ..+.+-|..|.|||++. ...|++++||||||++||+|++|+.|
T Consensus 453 g~lrltyFG~a~~~~~~----------~~tp~~t~~y~APEvl~----------~~~yt~acD~WSLGvlLy~ML~G~tp 512 (612)
T KOG0603|consen 453 GHLRLTYFGFWSELERS----------CDTPALTLQYVAPEVLA----------IQEYTEACDWWSLGVLLYEMLTGRTL 512 (612)
T ss_pred CcEEEEEechhhhCchh----------hcccchhhcccChhhhc----------cCCCCcchhhHHHHHHHHHHHhCCCc
Confidence 99999999998865211 34556688899999764 45799999999999999999999999
Q ss_pred CCchHH-HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHL-LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~-~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|....- .++......+. .....+..+++||.+||+.||.+|+++.+++.|
T Consensus 513 ~~~~P~~~ei~~~i~~~~--~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 513 FAAHPAGIEIHTRIQMPK--FSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred cccCCchHHHHHhhcCCc--cccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 964322 23333222222 226678899999999999999999999999998
No 114
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.95 E-value=1.2e-27 Score=284.55 Aligned_cols=193 Identities=17% Similarity=0.167 Sum_probs=157.4
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
.||+|++++.+++++...|+||||++ |+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 59 ~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~ 138 (323)
T cd05615 59 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG 138 (323)
T ss_pred CCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence 46788899999999999999999999 69999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++....... ......|++.|+|||.+. ...++.++||||+||++|||++|.+||
T Consensus 139 ~ikL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~elltG~~pf 201 (323)
T cd05615 139 HIKIADFGMCKEHMVDGV-------TTRTFCGTPDYIAPEIIA----------YQPYGKSVDWWAYGVLLYEMLAGQPPF 201 (323)
T ss_pred CEEEeccccccccCCCCc-------cccCccCCccccCHHHHc----------CCCCCCccchhhhHHHHHHHHhCCCCC
Confidence 999999999875322111 123445789999999774 335788999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 211 (1472)
...................+...+..+++++.+||++||.+|+++ +++++|
T Consensus 202 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 202 DGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred CCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence 765433322222222223455567889999999999999999974 566665
No 115
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.95 E-value=8.7e-28 Score=289.64 Aligned_cols=191 Identities=23% Similarity=0.339 Sum_probs=150.9
Q ss_pred CCCCCcceeeEEEEeC------CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~------~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++... ...|+||||++++|.+.+.. .+++..++.++.|++.||.|||++||+||||||+||
T Consensus 73 l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Ni 150 (355)
T cd07874 73 VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 150 (355)
T ss_pred hCCCchhceeeeeeccccccccceeEEEhhhhcccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHE
Confidence 5799999999988654 35799999999999988865 378999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
|++.++.+||+|||+++..... .......+++.|+|||.+. +..++.++|||||||++|+|+
T Consensus 151 ll~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~t~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~ 212 (355)
T cd07874 151 VVKSDCTLKILDFGLARTAGTS--------FMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGEMV 212 (355)
T ss_pred EECCCCCEEEeeCcccccCCCc--------cccCCccccCCccCHHHHc----------CCCCCchhhHHHHHHHHHHHH
Confidence 9999999999999998754211 1123445788999999874 335788999999999999999
Q ss_pred hCCCCCCchHHHHH--------------------------HhcC--C--------------CCCcccCCCCCHHHHHHHH
Q 000470 155 LEVPFFELSHLLAY--------------------------RRGQ--Y--------------DPSQHLEKIPDSGIRKMIL 192 (1472)
Q Consensus 155 tg~~pf~~~~~~~~--------------------------~~~~--~--------------~~~~~l~~~~~~~l~~LI~ 192 (1472)
+|+.||........ .... + ..........+..+++||.
T Consensus 213 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 292 (355)
T cd07874 213 RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS 292 (355)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHH
Confidence 99999964331110 0000 0 0000111223467899999
Q ss_pred HhcccCcCCCCCHHHHHHH
Q 000470 193 HMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 193 ~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||+.||++|||++|+|+|
T Consensus 293 ~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 293 KMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhcCCchhcCCHHHHhcC
Confidence 9999999999999999999
No 116
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.95 E-value=1.6e-27 Score=277.54 Aligned_cols=199 Identities=14% Similarity=0.101 Sum_probs=158.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKG 63 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~g 63 (1472)
++||||+++++++..++..|++|||++ ++|.+++... ..+++.++..++.||+.||.|||++|
T Consensus 65 l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~ 144 (283)
T cd05048 65 LQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH 144 (283)
T ss_pred cCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 579999999999999999999999999 6999999653 45788999999999999999999999
Q ss_pred CeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchH
Q 000470 64 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 143 (1472)
Q Consensus 64 IvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DI 143 (1472)
|+||||||+||++++++.++|+|||+++...... .........+++.|+|||.+. ...++.++||
T Consensus 145 i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~sDv 209 (283)
T cd05048 145 FVHRDLAARNCLVGEGLTVKISDFGLSRDIYSAD-----YYRVQSKSLLPVRWMPPEAIL----------YGKFTTESDI 209 (283)
T ss_pred eeccccccceEEEcCCCcEEECCCcceeeccccc-----cccccCCCcccccccCHHHhc----------cCcCchhhhH
Confidence 9999999999999999999999999987653221 111123334577899999764 3357889999
Q ss_pred HHHHHHHHHHHh-CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 144 FAVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 144 wSlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
|||||++|||++ |.+||............ .......+...++++.+|+.+||+.||++||++.|++++++.
T Consensus 210 ~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 210 WSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 999999999998 88777543322222111 111122344567899999999999999999999999998753
No 117
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.95 E-value=1.1e-27 Score=291.59 Aligned_cols=200 Identities=19% Similarity=0.203 Sum_probs=156.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.+.++...|+||||++ |+|.+++.....+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 58 ~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~ 137 (382)
T cd05625 58 ADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 137 (382)
T ss_pred CCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 579999999999999999999999999 6999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCC------------CC----------------------------CceeeccCCCCccccCc
Q 000470 80 NWLYLSDFASFKPTYIPYDDP------------SD----------------------------FSFFFDTGGKRLCYLAP 119 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~------------~~----------------------------~~~~~~~~~gt~~Y~AP 119 (1472)
|.+||+|||++.......... .. ......+.+||+.|+||
T Consensus 138 g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 217 (382)
T cd05625 138 GHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAP 217 (382)
T ss_pred CCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCH
Confidence 999999999875321100000 00 00001234689999999
Q ss_pred ccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhc
Q 000470 120 ERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMI 195 (1472)
Q Consensus 120 E~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL 195 (1472)
|++. +..++.++||||+||++|||++|++||....... ................++++.++|.+|+
T Consensus 218 E~~~----------~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~ 287 (382)
T cd05625 218 EVLL----------RTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC 287 (382)
T ss_pred HHhc----------CCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc
Confidence 9875 3357889999999999999999999997543222 2211111111112345678999999987
Q ss_pred ccCcCCCCC---HHHHHHH
Q 000470 196 QLEPELRFS---AESYLQN 211 (1472)
Q Consensus 196 ~~dP~~Rps---a~elL~~ 211 (1472)
.+|++|++ ++|+++|
T Consensus 288 -~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 288 -RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred -cCHhHcCCCCCHHHHhcC
Confidence 59999997 9999988
No 118
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.95 E-value=1.8e-27 Score=293.95 Aligned_cols=194 Identities=23% Similarity=0.295 Sum_probs=150.6
Q ss_pred CCCCCcceeeEEEEeC--------CeEEEEecccCCcHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Q 000470 1 MSSTPCVHKKFWQETD--------KAAYLLRQYFFNSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGD 68 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--------~~~~lV~Ey~~gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~D 68 (1472)
++||||+++++++... ..+|+||||++++|.+++. ....+++..++.++.||+.||+|||++||+|||
T Consensus 116 l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrD 195 (440)
T PTZ00036 116 LNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRD 195 (440)
T ss_pred cCCCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence 5899999999887432 2578999999999888774 345699999999999999999999999999999
Q ss_pred CCCCCEEEccCC-cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 69 IKCENVLVTSWN-WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 69 LKpeNILv~~~~-~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
|||+|||++..+ .+||+|||+++....... .....+++.|+|||++.+ ...++.++||||||
T Consensus 196 LKp~NILl~~~~~~vkL~DFGla~~~~~~~~--------~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwSlG 258 (440)
T PTZ00036 196 LKPQNLLIDPNTHTLKLCDFGSAKNLLAGQR--------SVSYICSRFYRAPELMLG---------ATNYTTHIDLWSLG 258 (440)
T ss_pred cCHHHEEEcCCCCceeeeccccchhccCCCC--------cccCCCCcCccCHHHhcC---------CCCCCcHHHHHHHH
Confidence 999999999665 699999999985532111 112356888999998742 23578899999999
Q ss_pred HHHHHHHhCCCCCCchH----HHHHHhcC--------------C-----CC------CcccCCCCCHHHHHHHHHhcccC
Q 000470 148 CVIAELFLEVPFFELSH----LLAYRRGQ--------------Y-----DP------SQHLEKIPDSGIRKMILHMIQLE 198 (1472)
Q Consensus 148 ~il~eLltg~~pf~~~~----~~~~~~~~--------------~-----~~------~~~l~~~~~~~l~~LI~~mL~~d 198 (1472)
|++|||++|.+||.... +..+.+.. + .. ...++...++++++||.+||++|
T Consensus 259 vil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~d 338 (440)
T PTZ00036 259 CIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYE 338 (440)
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCC
Confidence 99999999999996532 11111100 0 00 00122334678999999999999
Q ss_pred cCCCCCHHHHHHH
Q 000470 199 PELRFSAESYLQN 211 (1472)
Q Consensus 199 P~~Rpsa~elL~~ 211 (1472)
|.+|||+.|+|+|
T Consensus 339 P~~R~ta~e~l~h 351 (440)
T PTZ00036 339 PLKRLNPIEALAD 351 (440)
T ss_pred hhHCcCHHHHhCC
Confidence 9999999999998
No 119
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.95 E-value=1.1e-27 Score=283.09 Aligned_cols=195 Identities=22% Similarity=0.362 Sum_probs=155.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..++..|+||||++++|.+++... ..+++.+++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 61 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~ 140 (309)
T cd07872 61 LKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINER 140 (309)
T ss_pred CCCCCcceEEEEEeeCCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 5799999999999999999999999999999998764 458999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....+.. ......+++.|+|||.+.. ...++.++||||+||++|||++|++|
T Consensus 141 ~~~kl~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~el~tg~~p 204 (309)
T cd07872 141 GELKLADFGLARAKSVPTK-------TYSNEVVTLWYRPPDVLLG---------SSEYSTQIDMWGVGCIFFEMASGRPL 204 (309)
T ss_pred CCEEECccccceecCCCcc-------ccccccccccccCCHHHhC---------CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999875432211 1123456788999998742 23578899999999999999999999
Q ss_pred CCchHHHH----HHhc---------------------CCC---CCc--ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 160 FELSHLLA----YRRG---------------------QYD---PSQ--HLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 160 f~~~~~~~----~~~~---------------------~~~---~~~--~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
|....... +.+. .+. +.. ......++++++||.+||+.||.+|||++|++
T Consensus 205 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l 284 (309)
T cd07872 205 FPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAM 284 (309)
T ss_pred CCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHh
Confidence 96433211 1110 000 000 01123467899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 285 ~h 286 (309)
T cd07872 285 KH 286 (309)
T ss_pred cC
Confidence 88
No 120
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.95 E-value=1.3e-27 Score=289.13 Aligned_cols=198 Identities=20% Similarity=0.198 Sum_probs=157.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|.+++... .+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 100 ~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~ 178 (370)
T cd05621 100 ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKH 178 (370)
T ss_pred CCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCC
Confidence 579999999999999999999999998 6999999765 48999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++...... .....+..||+.|+|||++.... ....++.++||||+||++|||++|.+|
T Consensus 179 ~~~kL~DFG~a~~~~~~~------~~~~~~~~gt~~Y~aPE~~~~~~------~~~~~~~~~DiwSlG~ilyell~G~~P 246 (370)
T cd05621 179 GHLKLADFGTCMKMDETG------MVRCDTAVGTPDYISPEVLKSQG------GDGYYGRECDWWSVGVFLFEMLVGDTP 246 (370)
T ss_pred CCEEEEecccceecccCC------ceecccCCCCcccCCHHHHhccC------CCCCCCcccCEEeehHHHHHHHhCCCC
Confidence 999999999987642111 11124567899999999886331 123478899999999999999999999
Q ss_pred CCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHH
Q 000470 160 FELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 211 (1472)
|....... +...............+..++++|.+||..++.+ |++++|+++|
T Consensus 247 f~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 247 FYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 97554322 2221111111111234678999999999865543 8899999998
No 121
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.95 E-value=1.2e-27 Score=290.64 Aligned_cols=200 Identities=20% Similarity=0.218 Sum_probs=155.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|.+++.....+++..++.++.|++.||+|||++||+||||||+|||++.+
T Consensus 58 l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~ 137 (377)
T cd05629 58 SDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRG 137 (377)
T ss_pred CCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC
Confidence 589999999999999999999999998 6999999887889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCC----------CCC----C--------------------------ceeeccCCCCccccCc
Q 000470 80 NWLYLSDFASFKPTYIPYDD----------PSD----F--------------------------SFFFDTGGKRLCYLAP 119 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~----------~~~----~--------------------------~~~~~~~~gt~~Y~AP 119 (1472)
+.++|+|||+++........ ... . ........||+.|+||
T Consensus 138 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 217 (377)
T cd05629 138 GHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAP 217 (377)
T ss_pred CCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCH
Confidence 99999999998633111000 000 0 0000124589999999
Q ss_pred ccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHH-HHhcC-CCCCcccCC--CCCHHHHHHHHHhc
Q 000470 120 ERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-YRRGQ-YDPSQHLEK--IPDSGIRKMILHMI 195 (1472)
Q Consensus 120 E~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~~~~~-~~~~~~l~~--~~~~~l~~LI~~mL 195 (1472)
|.+. +..++.++|||||||++|||++|.+||....... +.... ......++. ..+.++++||.+||
T Consensus 218 E~~~----------~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL 287 (377)
T cd05629 218 EIFL----------QQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLI 287 (377)
T ss_pred HHHc----------cCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHh
Confidence 9874 3357889999999999999999999996543322 11111 111111222 35678999999999
Q ss_pred ccCcCCC---CCHHHHHHH
Q 000470 196 QLEPELR---FSAESYLQN 211 (1472)
Q Consensus 196 ~~dP~~R---psa~elL~~ 211 (1472)
. +|.+| +++.|+++|
T Consensus 288 ~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 288 T-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred c-CHhhcCCCCCHHHHhcC
Confidence 7 77775 599999998
No 122
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.95 E-value=1.1e-27 Score=279.64 Aligned_cols=193 Identities=26% Similarity=0.274 Sum_probs=152.2
Q ss_pred CCCCCcceeeEEEEe-----CCeEEEEecccCCcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 000470 1 MSSTPCVHKKFWQET-----DKAAYLLRQYFFNSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~-----~~~~~lV~Ey~~gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeN 73 (1472)
++||||+++++++.. ....|++|||+.++|.+++... +.+++.+++.++.||+.||+|||++||+||||||+|
T Consensus 59 ~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~N 138 (288)
T cd07863 59 FDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPEN 138 (288)
T ss_pred cCCCCeeeeeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 379999999998865 3468999999999999998763 348999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHH
Q 000470 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 74 ILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 153 (1472)
||++.++.+||+|||+++...... ......++..|+|||.+. +..++.++||||+||++|||
T Consensus 139 ili~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslG~~l~~l 200 (288)
T cd07863 139 ILVTSGGQVKLADFGLARIYSCQM--------ALTPVVVTLWYRAPEVLL----------QSTYATPVDMWSVGCIFAEM 200 (288)
T ss_pred EEECCCCCEEECccCccccccCcc--------cCCCccccccccCchHhh----------CCCCCCcchhhhHHHHHHHH
Confidence 999999999999999887542111 112345688899999874 33578899999999999999
Q ss_pred HhCCCCCCchHH----HHHHhcC------------------CCC-----CcccCCCCCHHHHHHHHHhcccCcCCCCCHH
Q 000470 154 FLEVPFFELSHL----LAYRRGQ------------------YDP-----SQHLEKIPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 154 ltg~~pf~~~~~----~~~~~~~------------------~~~-----~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
++|.+||..... .++.... +.+ ........++.+++||.+||+.||++|||+.
T Consensus 201 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 280 (288)
T cd07863 201 FRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAF 280 (288)
T ss_pred HhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHH
Confidence 999999954321 1111100 000 0011123456789999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
|+++|
T Consensus 281 ~~l~h 285 (288)
T cd07863 281 RALQH 285 (288)
T ss_pred HHhcC
Confidence 99998
No 123
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-27 Score=279.62 Aligned_cols=192 Identities=19% Similarity=0.169 Sum_probs=158.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|.|+|||++++++..++.+|||||||. |+|.++|+. +..+...+...++.||++|++||+++++|||||...||||+
T Consensus 258 L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~ 337 (468)
T KOG0197|consen 258 LRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD 337 (468)
T ss_pred CcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec
Confidence 689999999999999999999999999 999999987 56799999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCC--CCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG--KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~--gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
+++.+||+|||+++... + ..|....+ -...|.|||.|. ...++.++||||||++||||+|
T Consensus 338 ~~~~vKIsDFGLAr~~~---d-----~~Y~~~~~~kfPIkWtAPEa~~----------~~~FS~kSDVWSFGVlL~E~fT 399 (468)
T KOG0197|consen 338 EDLVVKISDFGLARLIG---D-----DEYTASEGGKFPIKWTAPEALN----------YGKFSSKSDVWSFGVLLWELFT 399 (468)
T ss_pred cCceEEEcccccccccC---C-----CceeecCCCCCCceecCHHHHh----------hCCcccccceeehhhhHHHHhc
Confidence 99999999999999431 1 11212222 244599999876 4478999999999999999999
Q ss_pred -CCCCCCchHHH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 156 -EVPFFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 156 -g~~pf~~~~~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
|+.||..-... +.....+. -.-|..+++.+.+++..||..+|++|||++.+...+
T Consensus 400 ~G~~py~~msn~ev~~~le~GyR--lp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l 458 (468)
T KOG0197|consen 400 YGRVPYPGMSNEEVLELLERGYR--LPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVL 458 (468)
T ss_pred cCCCCCCCCCHHHHHHHHhccCc--CCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHH
Confidence 58887644332 22222222 224556788999999999999999999999777653
No 124
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=2.3e-27 Score=291.88 Aligned_cols=196 Identities=25% Similarity=0.257 Sum_probs=153.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+||||+++++++..++..|+|||++.++|++++..+ ..+++.+++.|+.||+.||.|||++||+||||||+|||++..
T Consensus 217 L~HpnIv~l~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~ 296 (461)
T PHA03211 217 LSHPAVLALLDVRVVGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGP 296 (461)
T ss_pred CCCCCCCcEEEEEEECCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCC
Confidence 5899999999999999999999999999999998764 459999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC-CC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~ 158 (1472)
+.++|+|||+++....... ........||..|+|||++. +..++.++|||||||++|||++| .+
T Consensus 297 ~~vkL~DFGla~~~~~~~~-----~~~~~~~~GT~~Y~APE~~~----------~~~~~~~sDvwSlGviL~El~~g~~~ 361 (461)
T PHA03211 297 EDICLGDFGAACFARGSWS-----TPFHYGIAGTVDTNAPEVLA----------GDPYTPSVDIWSAGLVIFEAAVHTAS 361 (461)
T ss_pred CCEEEcccCCceecccccc-----cccccccCCCcCCcCHHHHc----------CCCCCchHHHHHHHHHHHHHHHcCCC
Confidence 9999999999875422111 11112346899999999875 34678899999999999999988 45
Q ss_pred CCCch----------HHHHH-HhcCCCC-------------------------C---cccC--CCCCHHHHHHHHHhccc
Q 000470 159 FFELS----------HLLAY-RRGQYDP-------------------------S---QHLE--KIPDSGIRKMILHMIQL 197 (1472)
Q Consensus 159 pf~~~----------~~~~~-~~~~~~~-------------------------~---~~l~--~~~~~~l~~LI~~mL~~ 197 (1472)
+|... ++..+ ....... . ..+. ...+..+++||.+||+.
T Consensus 362 lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~ 441 (461)
T PHA03211 362 LFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTF 441 (461)
T ss_pred cccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHccc
Confidence 55321 11111 1111100 0 0011 02345789999999999
Q ss_pred CcCCCCCHHHHHHH
Q 000470 198 EPELRFSAESYLQN 211 (1472)
Q Consensus 198 dP~~Rpsa~elL~~ 211 (1472)
||.+|||+.|+|+|
T Consensus 442 DP~~RPsa~elL~h 455 (461)
T PHA03211 442 DGARRPSAAELLRL 455 (461)
T ss_pred ChhhCcCHHHHhhC
Confidence 99999999999999
No 125
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.95 E-value=8.6e-28 Score=291.99 Aligned_cols=200 Identities=18% Similarity=0.193 Sum_probs=156.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.+++++.+|+||||++ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 58 l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~ 137 (376)
T cd05598 58 ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRD 137 (376)
T ss_pred CCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCC
Confidence 579999999999999999999999998 6999999988889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCC---------------CC---------------------CCceeeccCCCCccccCccccc
Q 000470 80 NWLYLSDFASFKPTYIPYDD---------------PS---------------------DFSFFFDTGGKRLCYLAPERFY 123 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~---------------~~---------------------~~~~~~~~~~gt~~Y~APE~~~ 123 (1472)
+.++|+|||++.......+. +. ..........||+.|+|||++.
T Consensus 138 ~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 217 (376)
T cd05598 138 GHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL 217 (376)
T ss_pred CCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHc
Confidence 99999999987532110000 00 0000011346899999999875
Q ss_pred ccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHHH----HhcCCCCCcccCCCCCHHHHHHHHHhcccCc
Q 000470 124 EHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEP 199 (1472)
Q Consensus 124 ~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP 199 (1472)
+..++.++|||||||++|||++|++||........ ...............++.+.+||.+|+ .+|
T Consensus 218 ----------~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p 286 (376)
T cd05598 218 ----------RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGA 286 (376)
T ss_pred ----------CCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCH
Confidence 34578899999999999999999999975543222 111111111112245678999999987 599
Q ss_pred CCCC---CHHHHHHH
Q 000470 200 ELRF---SAESYLQN 211 (1472)
Q Consensus 200 ~~Rp---sa~elL~~ 211 (1472)
.+|+ +++|+++|
T Consensus 287 ~~R~~~~t~~ell~h 301 (376)
T cd05598 287 EDRLGKNGADEIKAH 301 (376)
T ss_pred hhcCCCCCHHHHhCC
Confidence 9999 99999998
No 126
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.95 E-value=2.5e-27 Score=255.97 Aligned_cols=293 Identities=20% Similarity=0.321 Sum_probs=228.6
Q ss_pred CCCcccccceeeeccc---cccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC
Q 000470 1041 DSGWRPRGILVAHLQE---HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH 1117 (1472)
Q Consensus 1041 ~~~W~p~G~lV~~l~~---H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~ 1117 (1472)
...|+-..-++..++. ....|+|+.+ |...++||+.|.||+|||..+.+ ......+|.+.|.|+.|+.
T Consensus 177 dsNWr~Gr~~~~rinc~Se~skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~------c~~~L~GHtGSVLCLqyd~- 247 (499)
T KOG0281|consen 177 ESNWRCGRHLLQRINCRSENSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLE------CLKILTGHTGSVLCLQYDE- 247 (499)
T ss_pred hcchhccceeeeeecCCcccCCceEEEEe--cchhhhcccccCceEEeccccHH------HHHhhhcCCCcEEeeeccc-
Confidence 5678866566776664 4578999998 56789999999999999998766 4456678999999999864
Q ss_pred CCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCC
Q 000470 1118 SAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN 1197 (1472)
Q Consensus 1118 ~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~ 1197 (1472)
+.+++|++|.+|+|||+.+.. .+. ...+|-+.|-.+.|+.+ ++++++.|.+|.+||+.+.
T Consensus 248 -rviisGSSDsTvrvWDv~tge-------------~l~-tlihHceaVLhlrf~ng-----~mvtcSkDrsiaVWdm~sp 307 (499)
T KOG0281|consen 248 -RVIVSGSSDSTVRVWDVNTGE-------------PLN-TLIHHCEAVLHLRFSNG-----YMVTCSKDRSIAVWDMASP 307 (499)
T ss_pred -eEEEecCCCceEEEEeccCCc-------------hhh-HHhhhcceeEEEEEeCC-----EEEEecCCceeEEEeccCc
Confidence 599999999999999998511 122 22345555666678776 9999999999999999987
Q ss_pred Ccc---ceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCC
Q 000470 1198 SNT---WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTAR 1274 (1472)
Q Consensus 1198 ~~~---~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~ 1274 (1472)
..+ ..+.+ |...|+.+.|+. .++++++.|.+|++||+.+...++.+.. |..+|-++.+ ++
T Consensus 308 s~it~rrVLvG--HrAaVNvVdfd~--kyIVsASgDRTikvW~~st~efvRtl~g-HkRGIAClQY------------r~ 370 (499)
T KOG0281|consen 308 TDITLRRVLVG--HRAAVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNG-HKRGIACLQY------------RD 370 (499)
T ss_pred hHHHHHHHHhh--hhhheeeecccc--ceEEEecCCceEEEEeccceeeehhhhc-ccccceehhc------------cC
Confidence 643 34444 889999999985 4999999999999999999999988764 6667888776 46
Q ss_pred CEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCc
Q 000470 1275 PLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1354 (1472)
Q Consensus 1275 ~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1354 (1472)
+++++|+.|++|++||++.|.|..++..+. .-|
T Consensus 371 rlvVSGSSDntIRlwdi~~G~cLRvLeGHE-----------------------------------------------eLv 403 (499)
T KOG0281|consen 371 RLVVSGSSDNTIRLWDIECGACLRVLEGHE-----------------------------------------------ELV 403 (499)
T ss_pred eEEEecCCCceEEEEeccccHHHHHHhchH-----------------------------------------------Hhh
Confidence 789999999999999999999988876332 258
Q ss_pred eEeccCCCCcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhh
Q 000470 1355 RSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAA 1434 (1472)
Q Consensus 1355 ~sl~~~p~g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 1434 (1472)
+|+.|. +..+++|+-||+|++||+..+...+..++.-
T Consensus 404 RciRFd-~krIVSGaYDGkikvWdl~aaldpra~~~~~------------------------------------------ 440 (499)
T KOG0281|consen 404 RCIRFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTL------------------------------------------ 440 (499)
T ss_pred hheeec-CceeeeccccceEEEEecccccCCcccccch------------------------------------------
Confidence 888883 5689999999999999998776543222100
Q ss_pred hcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1435 ATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1435 ~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
....+..|.+.|..+. .+...|++++.|.+|-||+
T Consensus 441 Cl~~lv~hsgRVFrLQ---FD~fqIvsssHddtILiWd 475 (499)
T KOG0281|consen 441 CLRTLVEHSGRVFRLQ---FDEFQIISSSHDDTILIWD 475 (499)
T ss_pred HHHhhhhccceeEEEe---ecceEEEeccCCCeEEEEE
Confidence 0011123888888773 4677799999999999996
No 127
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.95 E-value=3.5e-27 Score=276.15 Aligned_cols=202 Identities=14% Similarity=0.111 Sum_probs=159.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKG 63 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~g 63 (1472)
++||||+++++++..+...++||||++ ++|.+++... ..+++..+..++.||+.||+|||++|
T Consensus 64 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 143 (291)
T cd05094 64 LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH 143 (291)
T ss_pred CCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 579999999999999999999999998 6999999653 23789999999999999999999999
Q ss_pred CeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchH
Q 000470 64 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 143 (1472)
Q Consensus 64 IvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DI 143 (1472)
|+||||||+|||++.++.++|+|||.++...... .........++..|+|||.+. ...++.++||
T Consensus 144 i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di 208 (291)
T cd05094 144 FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD-----YYRVGGHTMLPIRWMPPESIM----------YRKFTTESDV 208 (291)
T ss_pred eeecccCcceEEEccCCcEEECCCCcccccCCCc-----eeecCCCCCcceeecChHHhc----------cCCCCchhhH
Confidence 9999999999999999999999999987543221 111112334567899999764 3457889999
Q ss_pred HHHHHHHHHHHh-CCCCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcccC
Q 000470 144 FAVGCVIAELFL-EVPFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVF 217 (1472)
Q Consensus 144 wSlG~il~eLlt-g~~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~f 217 (1472)
|||||++|||++ |.+||........ ...........+...+..+.+++.+||+.||++||++.++++.+.....
T Consensus 209 ~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 209 WSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 999999999998 8888754332222 1111111222344567789999999999999999999999999875533
No 128
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=5.4e-28 Score=278.73 Aligned_cols=199 Identities=17% Similarity=0.144 Sum_probs=161.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
|.||+||++++.|..++.+||+.|||+| -....+-. ...|++.++..+++|++.||.|||+++|||||||..|||++-
T Consensus 86 CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl 165 (1187)
T KOG0579|consen 86 CDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL 165 (1187)
T ss_pred CCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe
Confidence 7899999999999999999999999996 55555443 345999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
+|.++|+|||.+..... ...--++..|||+|||||+..+. ...+.+|++++||||||++|.||.-+.|
T Consensus 166 dGdirLADFGVSAKn~~-------t~qkRDsFIGTPYWMAPEVvmCE-----T~KD~PYDykaDiWSlGITLIEMAqiEP 233 (1187)
T KOG0579|consen 166 DGDIRLADFGVSAKNKS-------TRQKRDSFIGTPYWMAPEVVMCE-----TFKDQPYDYKADIWSLGITLIEMAQIEP 233 (1187)
T ss_pred cCcEeeecccccccchh-------HHhhhccccCCcccccchheeec-----cccCCCchhhhhHHhhhhHHHHHhccCC
Confidence 99999999997643211 11123677899999999998754 3457799999999999999999999998
Q ss_pred CCCchH-HHHHHhc-CCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSH-LLAYRRG-QYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~-~~~~~~~-~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...-+ +..+.+. ... |...-|...+..++||+.+||.+||..||++.++|+|
T Consensus 234 PHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 234 PHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred CccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 885332 2222221 112 2223344556789999999999999999999999998
No 129
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.95 E-value=4.1e-27 Score=270.85 Aligned_cols=197 Identities=20% Similarity=0.219 Sum_probs=161.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+|+||++ ++|.+++...+.+++..++.++.|++.||.|||+.||+||||||+||+++.+
T Consensus 61 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~ 140 (263)
T cd06625 61 LQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSA 140 (263)
T ss_pred CCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence 579999999999999999999999998 5999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++......... .......++..|+|||.+. +..++.++||||+||++|||++|++|
T Consensus 141 ~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~~g~~p 206 (263)
T cd06625 141 GNVKLGDFGASKRLQTICSSG----TGMKSVTGTPYWMSPEVIS----------GEGYGRKADVWSVGCTVVEMLTEKPP 206 (263)
T ss_pred CCEEEeecccceecccccccc----ccccCCCcCccccCcceec----------cCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 999999999987542211111 0112334678899999875 23478899999999999999999988
Q ss_pred CCchHH-HHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHL-LAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~-~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...+. ..+.. ........++...+..+.++|.+||..+|++||++.|+++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 207 WAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 864332 22222 22222334556677899999999999999999999999998
No 130
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.95 E-value=1.9e-27 Score=287.63 Aligned_cols=191 Identities=21% Similarity=0.321 Sum_probs=150.7
Q ss_pred CCCCCcceeeEEEEeC------CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~------~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++... ...|+||||++++|.+.+.. .+++..++.++.|++.||+|||++||+||||||+||
T Consensus 80 l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NI 157 (364)
T cd07875 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157 (364)
T ss_pred cCCCCccccceeecccccccccCeEEEEEeCCCCCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHE
Confidence 5799999999988543 36799999999999998864 378999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
|++.++.+||+|||+++..... .......++..|+|||.+. +..++.++|||||||++|||+
T Consensus 158 ll~~~~~~kL~DfG~a~~~~~~--------~~~~~~~~t~~y~aPE~~~----------~~~~~~~~DiwSlG~il~ell 219 (364)
T cd07875 158 VVKSDCTLKILDFGLARTAGTS--------FMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGEMI 219 (364)
T ss_pred EECCCCcEEEEeCCCccccCCC--------CcccCCcccCCcCCHHHHh----------CCCCCchhhHHhHHHHHHHHH
Confidence 9999999999999998754211 1123446788999999875 346788999999999999999
Q ss_pred hCCCCCCchHHHH----HHh----------------------cC--CC--------------CCcccCCCCCHHHHHHHH
Q 000470 155 LEVPFFELSHLLA----YRR----------------------GQ--YD--------------PSQHLEKIPDSGIRKMIL 192 (1472)
Q Consensus 155 tg~~pf~~~~~~~----~~~----------------------~~--~~--------------~~~~l~~~~~~~l~~LI~ 192 (1472)
+|++||....... +.. .. +. .........+..+++||.
T Consensus 220 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~ 299 (364)
T cd07875 220 KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 299 (364)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHH
Confidence 9999996432111 000 00 00 000111223457899999
Q ss_pred HhcccCcCCCCCHHHHHHH
Q 000470 193 HMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 193 ~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||+.||.+|||++|+|+|
T Consensus 300 ~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 300 KMLVIDASKRISVDEALQH 318 (364)
T ss_pred HhcCcCcccCCCHHHHhcC
Confidence 9999999999999999999
No 131
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.95 E-value=1.6e-27 Score=287.86 Aligned_cols=191 Identities=24% Similarity=0.370 Sum_probs=150.6
Q ss_pred CCCCCcceeeEEEEeCC------eEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETDK------AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~------~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++..++ ..|+||||++++|.+.+.. .+++.++..++.||+.||.|||++||+||||||+||
T Consensus 77 l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NI 154 (359)
T cd07876 77 VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 154 (359)
T ss_pred CCCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHE
Confidence 58999999999986543 5799999999999888754 378999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
|++.+|.+||+|||+++..... .......+++.|+|||.+. +..++.++|||||||++|+|+
T Consensus 155 l~~~~~~~kl~Dfg~a~~~~~~--------~~~~~~~~t~~y~aPE~~~----------~~~~~~~~DiwSlG~il~el~ 216 (359)
T cd07876 155 VVKSDCTLKILDFGLARTACTN--------FMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGELV 216 (359)
T ss_pred EECCCCCEEEecCCCccccccC--------ccCCCCcccCCCCCchhcc----------CCCCCcchhhHHHHHHHHHHH
Confidence 9999999999999998643211 1123345788999999875 346788999999999999999
Q ss_pred hCCCCCCchHHH--------------------------HHHhc--CCCC--------------CcccCCCCCHHHHHHHH
Q 000470 155 LEVPFFELSHLL--------------------------AYRRG--QYDP--------------SQHLEKIPDSGIRKMIL 192 (1472)
Q Consensus 155 tg~~pf~~~~~~--------------------------~~~~~--~~~~--------------~~~l~~~~~~~l~~LI~ 192 (1472)
+|++||...... .+... .+.. ........++.+++||.
T Consensus 217 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 296 (359)
T cd07876 217 KGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLS 296 (359)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHH
Confidence 999999633210 00000 0000 00111234567999999
Q ss_pred HhcccCcCCCCCHHHHHHH
Q 000470 193 HMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 193 ~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||+.||++|||+.|+|+|
T Consensus 297 ~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 297 KMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHhccCcccCCCHHHHhcC
Confidence 9999999999999999998
No 132
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.95 E-value=2.3e-27 Score=288.53 Aligned_cols=201 Identities=17% Similarity=0.173 Sum_probs=155.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 58 l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~ 137 (381)
T cd05626 58 ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLD 137 (381)
T ss_pred cCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCC
Confidence 579999999999999999999999998 6999999887889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCC---------------CC-------------------------CCceeeccCCCCccccCc
Q 000470 80 NWLYLSDFASFKPTYIPYDD---------------PS-------------------------DFSFFFDTGGKRLCYLAP 119 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~---------------~~-------------------------~~~~~~~~~~gt~~Y~AP 119 (1472)
+.+||+|||+++........ +. .......+..||+.|+||
T Consensus 138 ~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 217 (381)
T cd05626 138 GHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAP 217 (381)
T ss_pred CCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCH
Confidence 99999999987533111000 00 000011234689999999
Q ss_pred ccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhc
Q 000470 120 ERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMI 195 (1472)
Q Consensus 120 E~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL 195 (1472)
|++. +..++.++|||||||++|||++|.+||....... +...............++++++||.+|+
T Consensus 218 E~~~----------~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll 287 (381)
T cd05626 218 EVLL----------RKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLC 287 (381)
T ss_pred HHHc----------CCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHc
Confidence 9875 3357889999999999999999999996543222 1111111111112235688999999976
Q ss_pred cc--CcCCCCCHHHHHHH
Q 000470 196 QL--EPELRFSAESYLQN 211 (1472)
Q Consensus 196 ~~--dP~~Rpsa~elL~~ 211 (1472)
.. +|..|++++|+++|
T Consensus 288 ~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 288 CSAEERLGRNGADDIKAH 305 (381)
T ss_pred cCcccccCCCCHHHHhcC
Confidence 54 45559999999998
No 133
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.95 E-value=2.5e-27 Score=285.33 Aligned_cols=195 Identities=21% Similarity=0.211 Sum_probs=153.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.++.+|+||||++ |+|.+. ..+.+..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 129 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 204 (353)
T PLN00034 129 VNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSA 204 (353)
T ss_pred CCCCCcceeeeEeccCCeEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC
Confidence 579999999999999999999999999 577653 335788889999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....... ......|+..|+|||.+.... ..+...+.++|||||||++|||++|+.|
T Consensus 205 ~~~kL~DfG~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~DvwslGvil~el~~g~~p 272 (353)
T PLN00034 205 KNVKIADFGVSRILAQTMD-------PCNSSVGTIAYMSPERINTDL-----NHGAYDGYAGDIWSLGVSILEFYLGRFP 272 (353)
T ss_pred CCEEEcccccceecccccc-------cccccccCccccCcccccccc-----ccCcCCCcchhHHHHHHHHHHHHhCCCC
Confidence 9999999999875532111 113446789999999875321 1233456789999999999999999999
Q ss_pred CCchH---HHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH---LLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~---~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.... .... ...........+...+.++++||.+||+.||++||++.|+++|
T Consensus 273 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 273 FGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 96322 1111 1111222233445567889999999999999999999999998
No 134
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.95 E-value=1.3e-27 Score=285.14 Aligned_cols=200 Identities=19% Similarity=0.148 Sum_probs=159.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++++++++...|+||||++ |+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~ 137 (330)
T cd05601 58 SNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDR 137 (330)
T ss_pred CCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECC
Confidence 479999999999999999999999998 6999999875 67999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
+|.+||+|||+++...... ........|++.|+|||.+..... .....++.++|||||||++|||++|..
T Consensus 138 ~~~~kL~Dfg~a~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~----~~~~~~~~~~DiwslG~il~el~~g~~ 207 (330)
T cd05601 138 TGHIKLADFGSAARLTANK------MVNSKLPVGTPDYIAPEVLTTMNG----DGKGTYGVECDWWSLGVIAYEMIYGRS 207 (330)
T ss_pred CCCEEeccCCCCeECCCCC------ceeeecccCCccccCHHHhccccc----cccCCCCCcceeecccceeeeeccCCC
Confidence 9999999999987542211 112233467899999998763321 124467899999999999999999999
Q ss_pred CCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||....... +...............++.+++||.+||. ||++||+++++++|
T Consensus 208 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 208 PFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 996543222 11111111111122356789999999998 99999999999998
No 135
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.95 E-value=1.2e-27 Score=290.20 Aligned_cols=196 Identities=24% Similarity=0.323 Sum_probs=157.0
Q ss_pred CCCCCcceeeEEEEeCC-----eEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDK-----AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~-----~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||++++++++.+. ..|+||||+.++|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||
T Consensus 56 l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil 135 (372)
T cd07853 56 FKHDNVLSALDILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLL 135 (372)
T ss_pred CCCCCcCCHhheecCCCccccceEEEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEE
Confidence 58999999999998876 8999999999999999988788999999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.+||+|||+++...... ........+++.|+|||.+.+ ...++.++||||+||++|||++
T Consensus 136 i~~~~~~kL~Dfg~a~~~~~~~------~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~el~~ 200 (372)
T cd07853 136 VNSNCVLKICDFGLARVEEPDE------SKHMTQEVVTQYYRAPEILMG---------SRHYTSAVDIWSVGCIFAELLG 200 (372)
T ss_pred ECCCCCEEeccccceeecccCc------cccCCCCCcCCCcCCHHHHcC---------CCCCCcHHHHHhHHHHHHHHHc
Confidence 9999999999999987542211 111233456888999998752 2346889999999999999999
Q ss_pred CCCCCCchHHHH----HH-----------------------hcCCCCCc-----ccCCCCCHHHHHHHHHhcccCcCCCC
Q 000470 156 EVPFFELSHLLA----YR-----------------------RGQYDPSQ-----HLEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 156 g~~pf~~~~~~~----~~-----------------------~~~~~~~~-----~l~~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
|++||....... +. .....+.. .+....++.+.+||.+||+.||++||
T Consensus 201 g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~ 280 (372)
T cd07853 201 RRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRI 280 (372)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCc
Confidence 999996432111 10 00011100 12233467899999999999999999
Q ss_pred CHHHHHHH
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~elL~~ 211 (1472)
|++|+++|
T Consensus 281 t~~e~l~h 288 (372)
T cd07853 281 SAADALAH 288 (372)
T ss_pred CHHHHhcC
Confidence 99999998
No 136
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.95 E-value=1.1e-25 Score=253.35 Aligned_cols=283 Identities=18% Similarity=0.255 Sum_probs=232.5
Q ss_pred cceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEcccc
Q 000470 1059 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHI 1138 (1472)
Q Consensus 1059 ~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~ 1138 (1472)
..||+++|+.+|.+||||+.||.++||+.... ...++..|.++|.++.|...|++|++++-||++.+||..+
T Consensus 236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~-------l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~- 307 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSEDGEARIWNKDGN-------LISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHT- 307 (524)
T ss_pred CCcceEEecCCCCeEEEeecCcEEEEEecCch-------hhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccC-
Confidence 56999999999999999999999999998653 3457788999999999999999999999999999999963
Q ss_pred ccCCCccccccCcccceeecCCCCcE-EEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEE
Q 000470 1139 SRGLGNVEKYSGISDIKKKDTKEGAI-VTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVT 1217 (1472)
Q Consensus 1139 ~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~ 1217 (1472)
+ .+.+...-+..+ +.+. |-.+ ..+++++.||.|+++-+...+++.++.+ |++.|.++.|
T Consensus 308 ----g---------~~~q~f~~~s~~~lDVd-W~~~----~~F~ts~td~~i~V~kv~~~~P~~t~~G--H~g~V~alk~ 367 (524)
T KOG0273|consen 308 ----G---------TVKQQFEFHSAPALDVD-WQSN----DEFATSSTDGCIHVCKVGEDRPVKTFIG--HHGEVNALKW 367 (524)
T ss_pred ----c---------eEEEeeeeccCCccceE-EecC----ceEeecCCCceEEEEEecCCCcceeeec--ccCceEEEEE
Confidence 1 112222222222 3333 4332 2899999999999999999999999988 9999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEE
Q 000470 1218 GPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCH 1297 (1472)
Q Consensus 1218 sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~ 1297 (1472)
+|.|..|++++.||++++|.+....+...+.. |...|..+.| +|.+........+-.+++++.|+.|++||++.|.|.
T Consensus 368 n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~-Hskei~t~~w-sp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i 445 (524)
T KOG0273|consen 368 NPTGSLLASCSDDGTLKIWSMGQSNSVHDLQA-HSKEIYTIKW-SPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPI 445 (524)
T ss_pred CCCCceEEEecCCCeeEeeecCCCcchhhhhh-hccceeeEee-cCCCCccCCCcCCceEEEeecCCeEEEEEccCCcee
Confidence 99999999999999999999988888887765 6667888988 888765444455667889999999999999999998
Q ss_pred EEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEE
Q 000470 1298 QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRR 1376 (1472)
Q Consensus 1298 ~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~Irl 1376 (1472)
.+|- .|..+|++++|+|+| ++++|+.||.|.+
T Consensus 446 ~~f~-----------------------------------------------kH~~pVysvafS~~g~ylAsGs~dg~V~i 478 (524)
T KOG0273|consen 446 HTLM-----------------------------------------------KHQEPVYSVAFSPNGRYLASGSLDGCVHI 478 (524)
T ss_pred Eeec-----------------------------------------------cCCCceEEEEecCCCcEEEecCCCCeeEe
Confidence 8874 233479999999999 7779999999999
Q ss_pred EeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCC
Q 000470 1377 WDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQ 1456 (1472)
Q Consensus 1377 WDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~ 1456 (1472)
|+...++..+... -.+.|..| .|+.+|
T Consensus 479 ws~~~~~l~~s~~----------------------------------------------------~~~~Ifel-~Wn~~G 505 (524)
T KOG0273|consen 479 WSTKTGKLVKSYQ----------------------------------------------------GTGGIFEL-CWNAAG 505 (524)
T ss_pred ccccchheeEeec----------------------------------------------------CCCeEEEE-EEcCCC
Confidence 9998776543332 24568999 699999
Q ss_pred cEEEEEcCCceEEEc
Q 000470 1457 RLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1457 ~~LvS~s~DG~IkVW 1471 (1472)
..|..+-.||.|.|-
T Consensus 506 ~kl~~~~sd~~vcvl 520 (524)
T KOG0273|consen 506 DKLGACASDGSVCVL 520 (524)
T ss_pred CEEEEEecCCCceEE
Confidence 999988889998874
No 137
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.95 E-value=3e-27 Score=281.61 Aligned_cols=203 Identities=19% Similarity=0.196 Sum_probs=152.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..++..|+||||++ |+|.+++.. ...+++.++++++.|++.||+|||++||+||||||+|||++
T Consensus 56 l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~ 135 (327)
T cd08227 56 FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS 135 (327)
T ss_pred cCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe
Confidence 589999999999999999999999999 699999965 34589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++++||+.................+.....++..|+|||.+... ...++.++||||+||++|||++|.
T Consensus 136 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~DiwslG~il~el~~g~ 207 (327)
T cd08227 136 VDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQN--------LQGYDAKSDIYSVGITACELANGH 207 (327)
T ss_pred cCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcc--------cCCCCchhhHHHHHHHHHHHHHCC
Confidence 999999999986543321111100000011223456779999987521 235788999999999999999999
Q ss_pred CCCCchHHHH----HHhcCCC----------------C--------------------------CcccCCCCCHHHHHHH
Q 000470 158 PFFELSHLLA----YRRGQYD----------------P--------------------------SQHLEKIPDSGIRKMI 191 (1472)
Q Consensus 158 ~pf~~~~~~~----~~~~~~~----------------~--------------------------~~~l~~~~~~~l~~LI 191 (1472)
+||....... ...+... + ........++.+++||
T Consensus 208 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 287 (327)
T cd08227 208 VPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFV 287 (327)
T ss_pred CCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHH
Confidence 9986322111 0000000 0 0001112356799999
Q ss_pred HHhcccCcCCCCCHHHHHHH
Q 000470 192 LHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 192 ~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+||+.||++|||++|+++|
T Consensus 288 ~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 288 EQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred HHHHhhCchhcCCHHHHhcC
Confidence 99999999999999999998
No 138
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=2.5e-27 Score=285.60 Aligned_cols=193 Identities=19% Similarity=0.243 Sum_probs=151.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||+.++|++++.. ...+++.+++.|+.||+.||.|||++||+||||||+|||++..
T Consensus 114 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~ 193 (357)
T PHA03209 114 VNHPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDV 193 (357)
T ss_pred CCCCCCcChhheEEeCCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 589999999999999999999999999999999865 3568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC-CC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~ 158 (1472)
+.++|+|||.++..... + ......|++.|+|||.+. +..++.++|||||||++|||+++ .+
T Consensus 194 ~~~kl~DfG~a~~~~~~---~-----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvvl~ell~~~~~ 255 (357)
T PHA03209 194 DQVCIGDLGAAQFPVVA---P-----AFLGLAGTVETNAPEVLA----------RDKYNSKADIWSAGIVLFEMLAYPST 255 (357)
T ss_pred CCEEEecCccccccccC---c-----ccccccccccccCCeecC----------CCCCCchhhHHHHHHHHHHHHHcCCc
Confidence 99999999988643211 1 112345788999999875 34678899999999999999986 66
Q ss_pred CCCch-------------HHHHHHhc-CCCCCc-------------------------c---c-CCCCCHHHHHHHHHhc
Q 000470 159 FFELS-------------HLLAYRRG-QYDPSQ-------------------------H---L-EKIPDSGIRKMILHMI 195 (1472)
Q Consensus 159 pf~~~-------------~~~~~~~~-~~~~~~-------------------------~---l-~~~~~~~l~~LI~~mL 195 (1472)
+|... .+..+... ...+.. . + ....+..+.+||.+||
T Consensus 256 ~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL 335 (357)
T PHA03209 256 IFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKML 335 (357)
T ss_pred cccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHH
Confidence 65421 11111110 000000 0 0 0123456788999999
Q ss_pred ccCcCCCCCHHHHHHH
Q 000470 196 QLEPELRFSAESYLQN 211 (1472)
Q Consensus 196 ~~dP~~Rpsa~elL~~ 211 (1472)
+.||++|||+.|+|+|
T Consensus 336 ~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 336 TFDAAMRPSAEEILNY 351 (357)
T ss_pred cCCcccCcCHHHHhcC
Confidence 9999999999999998
No 139
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.95 E-value=5.4e-27 Score=272.56 Aligned_cols=193 Identities=18% Similarity=0.171 Sum_probs=152.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||++++++++.+...|+||||++ ++|.+++.... .+++..+..++.||+.||+|||++||+||||||+||+++
T Consensus 50 l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~ 129 (277)
T cd05607 50 VNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD 129 (277)
T ss_pred cCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc
Confidence 589999999999999999999999998 69998886533 488999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||++....... ......|+..|+|||.+. +..++.++||||+||++|||++|.
T Consensus 130 ~~~~~~l~Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslGv~l~el~~g~ 191 (277)
T cd05607 130 DQGNCRLSDLGLAVELKDGK--------TITQRAGTNGYMAPEILK----------EEPYSYPVDWFAMGCSIYEMVAGR 191 (277)
T ss_pred CCCCEEEeeceeeeecCCCc--------eeeccCCCCCccCHHHHc----------cCCCCCchhHHHHHHHHHHHHhCC
Confidence 99999999999886542111 112345788999999874 234788999999999999999999
Q ss_pred CCCCchH----HHHHHhcCCCCC-cccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSH----LLAYRRGQYDPS-QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~----~~~~~~~~~~~~-~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||.... .....+...... .......++++++||.+||+.||++||++.|++++
T Consensus 192 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 192 TPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred CCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 9986421 111212111111 11123457789999999999999999999666544
No 140
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.3e-28 Score=279.70 Aligned_cols=193 Identities=21% Similarity=0.259 Sum_probs=162.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++|||++.|.++|..+...|||||||-|+-.|++.- ++.+.+.++..|+.+.+.||.|||+++.||||||..|||++..
T Consensus 83 l~HPntieYkgCyLre~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~ 162 (948)
T KOG0577|consen 83 LRHPNTIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEP 162 (948)
T ss_pred ccCCCcccccceeeccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCC
Confidence 589999999999999999999999999988777743 4459999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC-C
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV-P 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~-~ 158 (1472)
|.|||+|||++.... | ..++.|||.|||||++.. ...+.|+-++||||||+++.||...+ |
T Consensus 163 g~VKLaDFGSAsi~~-----P------AnsFvGTPywMAPEVILA-------MDEGqYdgkvDvWSLGITCIELAERkPP 224 (948)
T KOG0577|consen 163 GLVKLADFGSASIMA-----P------ANSFVGTPYWMAPEVILA-------MDEGQYDGKVDVWSLGITCIELAERKPP 224 (948)
T ss_pred CeeeeccccchhhcC-----c------hhcccCCccccchhHhee-------ccccccCCccceeeccchhhhhhhcCCC
Confidence 999999999876441 1 256789999999999973 34568999999999999999999995 5
Q ss_pred CCCchHHHHHHhcCCCCCcccCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLAYRRGQYDPSQHLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~~~~~~~~~~~~l~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+|+.+-...+........+.+.. -.+..++.||..||++-|.+|||.+++|+|
T Consensus 225 lFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 225 LFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred ccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 56666555544433333333333 345789999999999999999999999998
No 141
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.95 E-value=3.7e-28 Score=255.57 Aligned_cols=204 Identities=23% Similarity=0.310 Sum_probs=156.8
Q ss_pred CCCCCcceeeEEEEeC-----CeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecC
Q 000470 1 MSSTPCVHKKFWQETD-----KAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGD 68 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~-----~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~g--IvH~D 68 (1472)
++||||++++++...+ ...||+++|.. |+|.|.|.. ..++++.++.+|+.+|++||++||+.. +.|||
T Consensus 75 f~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~D 154 (302)
T KOG2345|consen 75 FNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRD 154 (302)
T ss_pred hCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccC
Confidence 4799999998876443 35999999999 899998864 347999999999999999999999998 99999
Q ss_pred CCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceee--ccCCCCccccCcccccccCCccccccCCCCCccchHHHH
Q 000470 69 IKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFF--DTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 146 (1472)
Q Consensus 69 LKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~--~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSl 146 (1472)
|||.|||+++.+.++|.|||++......-.+..+....- .....|..|+|||.|.- ......+.++|||||
T Consensus 155 iKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~v-------k~~~ti~ertDIWSL 227 (302)
T KOG2345|consen 155 IKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNV-------KSHCTITERTDIWSL 227 (302)
T ss_pred CCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheec-------ccCcccccccchhhh
Confidence 999999999999999999999876543322221111110 12234778999999973 335578999999999
Q ss_pred HHHHHHHHhCCCCCCchHH------HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 147 GCVIAELFLEVPFFELSHL------LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 147 G~il~eLltg~~pf~~~~~------~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
||++|+|+.|..||+..-. .....+.+..+ -....++.+.++|..||+.||.+||++.+++.++.
T Consensus 228 GCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P--~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 228 GCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIP--NSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred hHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccC--CCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 9999999999999973211 01111122211 12246789999999999999999999999998853
No 142
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.95 E-value=3.5e-27 Score=279.62 Aligned_cols=198 Identities=23% Similarity=0.313 Sum_probs=150.1
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccCCcHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFFNSLRDRLST---------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~gsL~d~l~~---------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DL 69 (1472)
++||||+++++++.. +...|+||||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||
T Consensus 55 l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dl 134 (317)
T cd07867 55 LKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDL 134 (317)
T ss_pred CCCCCeeeEEEEEeccCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCC
Confidence 589999999998854 568899999999999998752 124889999999999999999999999999999
Q ss_pred CCCCEEE----ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHH
Q 000470 70 KCENVLV----TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFA 145 (1472)
Q Consensus 70 KpeNILv----~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwS 145 (1472)
||+|||+ +..+.+||+|||+++....+.... .......+++.|+|||.+.. ...++.++||||
T Consensus 135 kp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwS 201 (317)
T cd07867 135 KPANILVMGEGPERGRVKIADMGFARLFNSPLKPL----ADLDPVVVTFWYRAPELLLG---------ARHYTKAIDIWA 201 (317)
T ss_pred CHHHEEEccCCCCCCcEEEeeccceeccCCCcccc----cccCcceecccccCcHHhcC---------CCccCcHHHHHh
Confidence 9999999 456789999999987653322111 11234457888999998752 235788999999
Q ss_pred HHHHHHHHHhCCCCCCchHH-------------HHHHh----------------------------cCCCCC------cc
Q 000470 146 VGCVIAELFLEVPFFELSHL-------------LAYRR----------------------------GQYDPS------QH 178 (1472)
Q Consensus 146 lG~il~eLltg~~pf~~~~~-------------~~~~~----------------------------~~~~~~------~~ 178 (1472)
+||++|||++|++||..... ..+.. ..+... ..
T Consensus 202 lG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (317)
T cd07867 202 IGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEK 281 (317)
T ss_pred HHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhc
Confidence 99999999999999853211 00000 000000 00
Q ss_pred cCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 179 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 179 l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.....+..+.+||.+||+.||.+|||++|+|+|
T Consensus 282 ~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 282 HKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred ccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 011234568899999999999999999999998
No 143
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.95 E-value=3.5e-27 Score=285.55 Aligned_cols=198 Identities=18% Similarity=0.203 Sum_probs=156.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.++++...|+||||++ |+|.+++... .+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 100 ~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~ 178 (371)
T cd05622 100 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS 178 (371)
T ss_pred CCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCC
Confidence 579999999999999999999999998 6999999765 48999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||+++...... .....+..||+.|+|||++.... ....++.++|||||||++|||++|.+|
T Consensus 179 ~~ikL~DfG~a~~~~~~~------~~~~~~~~gt~~y~aPE~l~~~~------~~~~~~~~~DiwSlGvilyell~G~~P 246 (371)
T cd05622 179 GHLKLADFGTCMKMNKEG------MVRCDTAVGTPDYISPEVLKSQG------GDGYYGRECDWWSVGVFLYEMLVGDTP 246 (371)
T ss_pred CCEEEEeCCceeEcCcCC------cccccCcccCccccCHHHHhccC------CCccCCCccceeehhHHHHHHHhCCCC
Confidence 999999999987552111 11123556899999999885321 123478899999999999999999999
Q ss_pred CCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHH
Q 000470 160 FELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 211 (1472)
|....... +...............+..+++||.+||..++.+ |++++|+++|
T Consensus 247 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 247 FYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 97654332 2222211111122345778999999999844433 7799999998
No 144
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.95 E-value=5.8e-27 Score=279.69 Aligned_cols=192 Identities=16% Similarity=0.120 Sum_probs=154.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.+++..|+||||+. |+|.+++...+.+++..+..++.|++.||.|||++ +|+||||||+|||++.
T Consensus 60 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~ 139 (333)
T cd06650 60 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 139 (333)
T ss_pred CCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC
Confidence 589999999999999999999999998 69999998877899999999999999999999985 7999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.+||+|||++....... .....++..|+|||.+. +..++.++|||||||++|||++|+.
T Consensus 140 ~~~~kL~Dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~il~~l~~g~~ 200 (333)
T cd06650 140 RGEIKLCDFGVSGQLIDSM---------ANSFVGTRSYMSPERLQ----------GTHYSVQSDIWSMGLSLVEMAIGRY 200 (333)
T ss_pred CCCEEEeeCCcchhhhhhc---------cccCCCCccccCHHHhc----------CCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 9999999999886542110 12335788999999774 3357889999999999999999988
Q ss_pred CCCchHHHHHHhc---------------------------------------------CCCCCcccC-CCCCHHHHHHHH
Q 000470 159 FFELSHLLAYRRG---------------------------------------------QYDPSQHLE-KIPDSGIRKMIL 192 (1472)
Q Consensus 159 pf~~~~~~~~~~~---------------------------------------------~~~~~~~l~-~~~~~~l~~LI~ 192 (1472)
||........... .....+.++ ...+.++++||.
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 280 (333)
T cd06650 201 PIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVN 280 (333)
T ss_pred CCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHH
Confidence 8864322211100 000000111 124578999999
Q ss_pred HhcccCcCCCCCHHHHHHH
Q 000470 193 HMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 193 ~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||++||++||+++|+++|
T Consensus 281 ~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 281 KCLIKNPAERADLKQLMVH 299 (333)
T ss_pred HhccCCcccCcCHHHHhhC
Confidence 9999999999999999988
No 145
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.94 E-value=4.2e-27 Score=276.88 Aligned_cols=195 Identities=23% Similarity=0.337 Sum_probs=155.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.++..|+||||++++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+||+++.+
T Consensus 61 l~h~nI~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~ 140 (301)
T cd07873 61 LKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINER 140 (301)
T ss_pred cCCCCcceEEEEEecCCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCC
Confidence 579999999999999999999999999999999876 3468999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++....+.. ......+++.|+|||.+.. ...++.++|||||||++|||++|++|
T Consensus 141 ~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~~l~el~tg~~~ 204 (301)
T cd07873 141 GELKLADFGLARAKSIPTK-------TYSNEVVTLWYRPPDILLG---------STDYSTQIDMWGVGCIFYEMSTGRPL 204 (301)
T ss_pred CcEEECcCcchhccCCCCC-------cccccceeecccCcHHHhC---------CCCCccHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999875432211 1123345788999997642 23567899999999999999999999
Q ss_pred CCchHHHHH----HhcCC-------------------CCC-------cccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 160 FELSHLLAY----RRGQY-------------------DPS-------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 160 f~~~~~~~~----~~~~~-------------------~~~-------~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
|......+. ..... ... .......++.+++||.+||+.||.+|||++|++
T Consensus 205 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil 284 (301)
T cd07873 205 FPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAM 284 (301)
T ss_pred CCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 965432111 11000 000 011123467899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 285 ~h 286 (301)
T cd07873 285 KH 286 (301)
T ss_pred cC
Confidence 98
No 146
>PTZ00284 protein kinase; Provisional
Probab=99.94 E-value=2.1e-27 Score=296.58 Aligned_cols=190 Identities=17% Similarity=0.220 Sum_probs=149.4
Q ss_pred CCCCcceeeEEEEeC-CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEccC
Q 000470 2 SSTPCVHKKFWQETD-KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~-~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~~~ 79 (1472)
.|++++++++++..+ .++|+|||++.++|.+++..++.+++.+++.|++||+.||+|||+ .||+||||||+|||++..
T Consensus 189 ~~~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 189 DRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETS 268 (467)
T ss_pred cCcceeeeEEEEEcCCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecC
Confidence 467799999998765 589999999999999999888889999999999999999999998 599999999999999876
Q ss_pred C----------------cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchH
Q 000470 80 N----------------WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 143 (1472)
Q Consensus 80 ~----------------~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DI 143 (1472)
+ .+||+|||.+..... ......||+.|+|||++. +..++.++||
T Consensus 269 ~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~----------~~~~~~gt~~Y~APE~~~----------~~~~~~~~Di 328 (467)
T PTZ00284 269 DTVVDPVTNRALPPDPCRVRICDLGGCCDERH----------SRTAIVSTRHYRSPEVVL----------GLGWMYSTDM 328 (467)
T ss_pred CcccccccccccCCCCceEEECCCCccccCcc----------ccccccCCccccCcHHhh----------cCCCCcHHHH
Confidence 5 499999997653211 112446789999999875 3467889999
Q ss_pred HHHHHHHHHHHhCCCCCCchHHHH----HHhcC--C-----------------------CCC-------------cccCC
Q 000470 144 FAVGCVIAELFLEVPFFELSHLLA----YRRGQ--Y-----------------------DPS-------------QHLEK 181 (1472)
Q Consensus 144 wSlG~il~eLltg~~pf~~~~~~~----~~~~~--~-----------------------~~~-------------~~l~~ 181 (1472)
|||||++|||++|++||....... +.... . .+. .....
T Consensus 329 wSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (467)
T PTZ00284 329 WSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREV 408 (467)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhh
Confidence 999999999999999996432111 10000 0 000 00001
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 182 IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 182 ~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+.++.+.+||.+||++||++|||++|+|+|
T Consensus 409 ~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 409 IRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred hchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 234567899999999999999999999999
No 147
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.94 E-value=7.3e-27 Score=273.04 Aligned_cols=195 Identities=14% Similarity=0.140 Sum_probs=157.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-------------CCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-------------FLSLVEKKWLAFQLLLAVKQCHEKGICH 66 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-------------~l~~~~~~~i~~Qll~aL~~LH~~gIvH 66 (1472)
++||||+++++++..+...|+||||++ ++|.+++...+ .+++.++..++.||+.||+|||++|++|
T Consensus 64 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H 143 (288)
T cd05093 64 LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVH 143 (288)
T ss_pred CCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 579999999999999999999999999 69999996432 4899999999999999999999999999
Q ss_pred cCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHH
Q 000470 67 GDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 146 (1472)
Q Consensus 67 ~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSl 146 (1472)
|||||+|||+++++.++|+|||.++...... .........++..|+|||.+. ...++.++|||||
T Consensus 144 ~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~sDiwsl 208 (288)
T cd05093 144 RDLATRNCLVGENLLVKIGDFGMSRDVYSTD-----YYRVGGHTMLPIRWMPPESIM----------YRKFTTESDVWSL 208 (288)
T ss_pred cccCcceEEEccCCcEEeccCCccccccCCc-----eeecCCCCCccccccCHHHhc----------cCCCCchhhHHHH
Confidence 9999999999999999999999987553211 111112333467799999764 3457889999999
Q ss_pred HHHHHHHHh-CCCCCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 147 GCVIAELFL-EVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 147 G~il~eLlt-g~~pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
||++|||++ |.+||....... +..+.. ...+...+..+.+|+.+||+.||.+||++.|+++.+.
T Consensus 209 G~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~ 277 (288)
T cd05093 209 GVVLWEIFTYGKQPWYQLSNNEVIECITQGRV---LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQ 277 (288)
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 999999998 788886443222 222221 2234456788999999999999999999999987754
No 148
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.94 E-value=3.7e-27 Score=284.64 Aligned_cols=200 Identities=21% Similarity=0.257 Sum_probs=156.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.+++++..|+||||++ |+|.+++..++.+++..++.++.|++.||+|||++||+||||||+|||++.+
T Consensus 58 l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~ 137 (360)
T cd05627 58 ADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAK 137 (360)
T ss_pred CCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCC
Confidence 579999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCC----------CCCCCc------------------eeeccCCCCccccCcccccccCCcccc
Q 000470 80 NWLYLSDFASFKPTYIPYD----------DPSDFS------------------FFFDTGGKRLCYLAPERFYEHGGEMQV 131 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~----------~~~~~~------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~ 131 (1472)
|.++|+|||+++....... .+..+. ....+..||+.|+|||++.
T Consensus 138 ~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-------- 209 (360)
T cd05627 138 GHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFM-------- 209 (360)
T ss_pred CCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHc--------
Confidence 9999999999864421100 000000 0011346899999999875
Q ss_pred ccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHHHHhcCC--CCCcccC--CCCCHHHHHHHHHhcccCcCCCC---C
Q 000470 132 AQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY--DPSQHLE--KIPDSGIRKMILHMIQLEPELRF---S 204 (1472)
Q Consensus 132 ~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~--~~~~~l~--~~~~~~l~~LI~~mL~~dP~~Rp---s 204 (1472)
+..++.++|||||||++|||++|++||............. .....++ ...++.+++||.+|+. ||.+|+ +
T Consensus 210 --~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~ 286 (360)
T cd05627 210 --QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNG 286 (360)
T ss_pred --CCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCC
Confidence 3467889999999999999999999996554332211111 1111112 1256789999999874 999998 4
Q ss_pred HHHHHHH
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~elL~~ 211 (1472)
++|+++|
T Consensus 287 ~~ei~~h 293 (360)
T cd05627 287 VEEIKSH 293 (360)
T ss_pred HHHHhcC
Confidence 7999988
No 149
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.94 E-value=6.7e-27 Score=272.59 Aligned_cols=195 Identities=21% Similarity=0.310 Sum_probs=154.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|+||||++++|.+++... ..+++.+++.++.||+.||+|||++||+||||||+||+++
T Consensus 56 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~ 135 (285)
T cd07861 56 LQHPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID 135 (285)
T ss_pred cCCCCEeeeEEEEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc
Confidence 5799999999999999999999999999999988653 4589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||+++....+.. ......+++.|+|||.+.. ...++.++|||||||++|+|++|+
T Consensus 136 ~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~~l~tg~ 199 (285)
T cd07861 136 NKGVIKLADFGLARAFGIPVR-------VYTHEVVTLWYRAPEVLLG---------SPRYSTPVDIWSIGTIFAEMATKK 199 (285)
T ss_pred CCCcEEECcccceeecCCCcc-------cccCCcccccccChHHhcC---------CCCcCcHHHHHHHHHHHHHHHHCC
Confidence 999999999999875532211 1123345788999997642 234678999999999999999999
Q ss_pred CCCCchHHHH----H---------------------HhcCCC----CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 158 PFFELSHLLA----Y---------------------RRGQYD----PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 158 ~pf~~~~~~~----~---------------------~~~~~~----~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
+||....... + +..... .........+++++++|.+||+.||++|||+.++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~l 279 (285)
T cd07861 200 PLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKA 279 (285)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence 9996432111 0 000000 0001122356789999999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
++|
T Consensus 280 l~~ 282 (285)
T cd07861 280 LNH 282 (285)
T ss_pred hcC
Confidence 988
No 150
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=1.3e-27 Score=250.35 Aligned_cols=199 Identities=23% Similarity=0.322 Sum_probs=159.7
Q ss_pred CCCCCcceeeEEEEeC--------CeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000470 1 MSSTPCVHKKFWQETD--------KAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--------~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKp 71 (1472)
|+|+|++.+++++.+. ..+|+||.+|+.+|..+++.+ .+++..+++.++.+++.||.|+|...|+|||+|+
T Consensus 73 lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKa 152 (376)
T KOG0669|consen 73 LKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKA 152 (376)
T ss_pred hcchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccH
Confidence 6899999998877432 258999999999999999986 5799999999999999999999999999999999
Q ss_pred CCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 72 eNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
+|+|++.+|.+||+|||+++....+.+..... +....-|.+|++||.+.+ ...|++++|||..|||++
T Consensus 153 aNvLIt~dgilklADFGlar~fs~~~n~~kpr---ytnrvvTLwYrppEllLG---------~r~yg~~iDiWgAgCima 220 (376)
T KOG0669|consen 153 ANVLITKDGILKLADFGLARAFSTSKNVVKPR---YTNRVVTLWYRPPELLLG---------DREYGPPIDIWGAGCIMA 220 (376)
T ss_pred hhEEEcCCceEEeeccccccceecccccCCCC---cccceeeeecCCHHHhhc---------ccccCCcchhHhHHHHHH
Confidence 99999999999999999998876654432211 244556999999998863 357899999999999999
Q ss_pred HHHhCCCCCCchHHHH-------------------------HHhcCCCCCcc----------cCCCCCHHHHHHHHHhcc
Q 000470 152 ELFLEVPFFELSHLLA-------------------------YRRGQYDPSQH----------LEKIPDSGIRKMILHMIQ 196 (1472)
Q Consensus 152 eLltg~~pf~~~~~~~-------------------------~~~~~~~~~~~----------l~~~~~~~l~~LI~~mL~ 196 (1472)
||+++.|.|....... |......|.+. -+...+++..+|+.+||.
T Consensus 221 eMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~ 300 (376)
T KOG0669|consen 221 EMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLK 300 (376)
T ss_pred HHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhc
Confidence 9999999996543211 11111111000 011235678899999999
Q ss_pred cCcCCCCCHHHHHHH
Q 000470 197 LEPELRFSAESYLQN 211 (1472)
Q Consensus 197 ~dP~~Rpsa~elL~~ 211 (1472)
.||.+|+.++++++|
T Consensus 301 ~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 301 LDPTKRIDADQALNH 315 (376)
T ss_pred cCcccCcchHhhhch
Confidence 999999999999998
No 151
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.94 E-value=9.9e-27 Score=274.15 Aligned_cols=197 Identities=14% Similarity=0.105 Sum_probs=152.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-------------------CCCCHHHHHHHHHHHHHHHHHHH
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-------------------PFLSLVEKKWLAFQLLLAVKQCH 60 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-------------------~~l~~~~~~~i~~Qll~aL~~LH 60 (1472)
++||||+++++++..+...|+||||++ |+|.+++... ..+++.++..++.||+.||.|||
T Consensus 76 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH 155 (304)
T cd05096 76 LKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS 155 (304)
T ss_pred cCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999999998 6999998653 23677889999999999999999
Q ss_pred HCCCeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCcc
Q 000470 61 EKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPS 140 (1472)
Q Consensus 61 ~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~ 140 (1472)
++||+||||||+|||++.++.+||+|||.++...... .........++..|+|||.+. ...++.+
T Consensus 156 ~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~ 220 (304)
T cd05096 156 SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGD-----YYRIQGRAVLPIRWMAWECIL----------MGKFTTA 220 (304)
T ss_pred HCCccccCcchhheEEcCCccEEECCCccceecccCc-----eeEecCcCCCCccccCHHHHh----------cCCCCch
Confidence 9999999999999999999999999999987552211 111123344577899999764 3357889
Q ss_pred chHHHHHHHHHHHHhC--CCCCCchHHHHH--------HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHH
Q 000470 141 MDIFAVGCVIAELFLE--VPFFELSHLLAY--------RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210 (1472)
Q Consensus 141 ~DIwSlG~il~eLltg--~~pf~~~~~~~~--------~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~ 210 (1472)
+|||||||++|||+++ ..||........ ...........+...+..+.+|+.+||+.||++|||++|+.+
T Consensus 221 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 221 SDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred hhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 9999999999999874 567753221111 111111111223345678999999999999999999999987
Q ss_pred Hh
Q 000470 211 NY 212 (1472)
Q Consensus 211 ~~ 212 (1472)
.+
T Consensus 301 ~l 302 (304)
T cd05096 301 FL 302 (304)
T ss_pred HH
Confidence 64
No 152
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.94 E-value=1.1e-26 Score=270.66 Aligned_cols=198 Identities=13% Similarity=0.091 Sum_probs=157.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-----------------CCCCHHHHHHHHHHHHHHHHHHHHC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-----------------PFLSLVEKKWLAFQLLLAVKQCHEK 62 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-----------------~~l~~~~~~~i~~Qll~aL~~LH~~ 62 (1472)
+.||||+++++++..+...|++|||++ ++|.+++..+ ..+++.++..++.|++.||.|||++
T Consensus 64 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~ 143 (283)
T cd05090 64 LHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH 143 (283)
T ss_pred CCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc
Confidence 579999999999999999999999999 6999998532 2478889999999999999999999
Q ss_pred CCeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccch
Q 000470 63 GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMD 142 (1472)
Q Consensus 63 gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~D 142 (1472)
||+||||||+|||++.++.++|+|||+++...... .........++..|+|||.+. +..++.++|
T Consensus 144 ~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~D 208 (283)
T cd05090 144 FFVHKDLAARNILIGEQLHVKISDLGLSREIYSAD-----YYRVQPKSLLPIRWMPPEAIM----------YGKFSSDSD 208 (283)
T ss_pred CeehhccccceEEEcCCCcEEeccccccccccCCc-----ceecccCCCccceecChHHhc----------cCCCCchhh
Confidence 99999999999999999999999999987653211 111223344567799999764 335788999
Q ss_pred HHHHHHHHHHHHh-CCCCCCchHHHHHH-hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 143 IFAVGCVIAELFL-EVPFFELSHLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 143 IwSlG~il~eLlt-g~~pf~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
||||||++|||++ |.+||......... ..........+...++.+++++.+||+.||++||++.+++++++
T Consensus 209 v~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 209 IWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred hHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 9999999999998 88888543222211 11111122244566788999999999999999999999999864
No 153
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.94 E-value=9.2e-27 Score=270.91 Aligned_cols=192 Identities=17% Similarity=0.206 Sum_probs=159.0
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||+.+++++..++..|+||||+. |+|.+++..++.+++..+..++.|++.||+|||++||+||||||+|||++.++
T Consensus 55 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~ 134 (279)
T cd05633 55 DCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHG 134 (279)
T ss_pred CCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCC
Confidence 68999999999999999999999999 69999998888899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||++....... .....|+..|+|||.+.. +..++.++||||+||++|||++|..||
T Consensus 135 ~~~l~dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~~g~~pf 196 (279)
T cd05633 135 HVRISDLGLACDFSKKK---------PHASVGTHGYMAPEVLQK---------GTAYDSSADWFSLGCMLFKLLRGHSPF 196 (279)
T ss_pred CEEEccCCcceeccccC---------ccCcCCCcCccCHHHhcC---------CCCCCchhhhHHHHHHHHHHHhCCCCc
Confidence 99999999876442110 122357889999997641 235788999999999999999998888
Q ss_pred Cch---HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 161 ELS---HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 161 ~~~---~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
... ...............++...+..++++|.+||+.||++|+ ++.|+++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 197 RQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 532 2222223333333345556678999999999999999999 69999998
No 154
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.94 E-value=4.5e-25 Score=259.71 Aligned_cols=346 Identities=17% Similarity=0.252 Sum_probs=261.5
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCc
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1129 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~ 1129 (1472)
+..++.+|-+.|++|.|+.|.++|++||.|-++|||+++..+.. ....+.+|...|.++-|..+...+.+.+.||.
T Consensus 137 l~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~----~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~ 212 (893)
T KOG0291|consen 137 LHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNL----FTYALNGHKDYVVACFFGANSLDLYTVSKDGA 212 (893)
T ss_pred EeeeecCCccceeEEEeccCCceEEeccccceEEEEEecccccc----ceEeccCCCcceEEEEeccCcceEEEEecCce
Confidence 45678899999999999999999999999999999999876632 23466789999999999999999999999999
Q ss_pred EEEEEccccccCCCc-------------c-ccccCcc------cceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeE
Q 000470 1130 IHMFSVDHISRGLGN-------------V-EKYSGIS------DIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGI 1189 (1472)
Q Consensus 1130 I~vwdv~~~~~~~~~-------------~-~~~~~~~------~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I 1189 (1472)
+.+|..+........ . ....+.. ..+.+....+..+++.+|++. .++|++|=..|..
T Consensus 213 l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~---t~~lvvgFssG~f 289 (893)
T KOG0291|consen 213 LFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKG---TNLLVVGFSSGEF 289 (893)
T ss_pred EEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCC---ceEEEEEecCCee
Confidence 999988721000000 0 0000000 112223344578899999998 6799999999999
Q ss_pred EEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCC-CcEEEEECCCCcccceEeccccCCceeEEeecCCCCCc
Q 000470 1190 HLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSR-GVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAA 1268 (1472)
Q Consensus 1190 ~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssd-G~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~ 1268 (1472)
.++++..-.+++.+.. ....|.+++|+..|.||+.|++. |.+-+|+.+...-+-.-+ +|...++++.+ +|+++
T Consensus 290 ~LyelP~f~lih~LSi--s~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQ-gH~~~i~~l~Y-SpDgq-- 363 (893)
T KOG0291|consen 290 GLYELPDFNLIHSLSI--SDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQ-GHSDRITSLAY-SPDGQ-- 363 (893)
T ss_pred EEEecCCceEEEEeec--ccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeecc-ccccceeeEEE-CCCCc--
Confidence 9999999888888876 45689999999999999999876 899999998776665533 46678999998 88776
Q ss_pred cccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCC
Q 000470 1269 VSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPP 1348 (1472)
Q Consensus 1269 ~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1348 (1472)
++++|+.||.|+|||..+|-|..+|..
T Consensus 364 -------~iaTG~eDgKVKvWn~~SgfC~vTFte---------------------------------------------- 390 (893)
T KOG0291|consen 364 -------LIATGAEDGKVKVWNTQSGFCFVTFTE---------------------------------------------- 390 (893)
T ss_pred -------EEEeccCCCcEEEEeccCceEEEEecc----------------------------------------------
Confidence 899999999999999999999888862
Q ss_pred CCcCCceEeccCCCC-cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecC--ceEEEEeeecCCcchhh
Q 000470 1349 PRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSS--GVQVVQERKRQPLTSKL 1425 (1472)
Q Consensus 1349 ~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~--~~~~~~e~~~~~~~~~~ 1425 (1472)
|..+|+++.|+..| .+++.+-||+||.||+.+..+-+.+.+|+. .++....++ |-.+....... -..
T Consensus 391 -Hts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p------~QfscvavD~sGelV~AG~~d~---F~I 460 (893)
T KOG0291|consen 391 -HTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEP------IQFSCVAVDPSGELVCAGAQDS---FEI 460 (893)
T ss_pred -CCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCc------eeeeEEEEcCCCCEEEeeccce---EEE
Confidence 44489999999888 677999999999999999888888877642 233333332 32222211000 000
Q ss_pred hhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1426 TAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1426 ~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
-........-.+.+.||.++|.++ .|++.+..|+|+|+|.+||+|+
T Consensus 461 fvWS~qTGqllDiLsGHEgPVs~l-~f~~~~~~LaS~SWDkTVRiW~ 506 (893)
T KOG0291|consen 461 FVWSVQTGQLLDILSGHEGPVSGL-SFSPDGSLLASGSWDKTVRIWD 506 (893)
T ss_pred EEEEeecCeeeehhcCCCCcceee-EEccccCeEEeccccceEEEEE
Confidence 000001111345677999999999 4999999999999999999996
No 155
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.94 E-value=1.6e-26 Score=275.98 Aligned_cols=211 Identities=19% Similarity=0.331 Sum_probs=185.9
Q ss_pred ceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCC
Q 000470 1049 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1128 (1472)
Q Consensus 1049 ~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG 1128 (1472)
.....|-||.++|.++.|+|+.+||+|||.|++||+|.+.+.. ....|.+|..+|+++.|+|.|.+||+||.|+
T Consensus 442 ~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s------~~V~y~GH~~PVwdV~F~P~GyYFatas~D~ 515 (707)
T KOG0263|consen 442 GTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWS------CLVIYKGHLAPVWDVQFAPRGYYFATASHDQ 515 (707)
T ss_pred ceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccce------eEEEecCCCcceeeEEecCCceEEEecCCCc
Confidence 3456699999999999999999999999999999999998754 6678889999999999999999999999999
Q ss_pred cEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCC
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1208 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h 1208 (1472)
+-++|..+.. .+.|. ...|-.-+.|+.|+|+ .+++++|+.|.+|++||+.+|..++.+.+ |
T Consensus 516 tArLWs~d~~-------------~PlRi-faghlsDV~cv~FHPN---s~Y~aTGSsD~tVRlWDv~~G~~VRiF~G--H 576 (707)
T KOG0263|consen 516 TARLWSTDHN-------------KPLRI-FAGHLSDVDCVSFHPN---SNYVATGSSDRTVRLWDVSTGNSVRIFTG--H 576 (707)
T ss_pred eeeeeecccC-------------Cchhh-hcccccccceEEECCc---ccccccCCCCceEEEEEcCCCcEEEEecC--C
Confidence 9999998841 12232 3345556788999999 67999999999999999999999999977 9
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEE
Q 000470 1209 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSL 1288 (1472)
Q Consensus 1209 ~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~V 1288 (1472)
.++|++++|+|+|.+|++|+.||.|++||+..+.++..+.. |.+.|.++.| +.++ ..+++|++|+.|++
T Consensus 577 ~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~-Ht~ti~SlsF-S~dg---------~vLasgg~DnsV~l 645 (707)
T KOG0263|consen 577 KGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKG-HTGTIYSLSF-SRDG---------NVLASGGADNSVRL 645 (707)
T ss_pred CCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhc-ccCceeEEEE-ecCC---------CEEEecCCCCeEEE
Confidence 99999999999999999999999999999999999988775 5778999998 6554 48999999999999
Q ss_pred EEcCCCe
Q 000470 1289 WNAENGS 1295 (1472)
Q Consensus 1289 WDl~t~~ 1295 (1472)
||+.+..
T Consensus 646 WD~~~~~ 652 (707)
T KOG0263|consen 646 WDLTKVI 652 (707)
T ss_pred EEchhhc
Confidence 9997643
No 156
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.94 E-value=3.6e-27 Score=235.21 Aligned_cols=201 Identities=25% Similarity=0.355 Sum_probs=163.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+|.|||+++++...++.+-+|+|||..+|..+... ++.++.+.++.++.|+++||.+||++++.||||||.|+|++.+
T Consensus 58 lkhknivrl~dvlhsdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~n 137 (292)
T KOG0662|consen 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRN 137 (292)
T ss_pred hhhcceeehhhhhccCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccC
Confidence 589999999999999999999999999999999865 6789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVP 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~ 158 (1472)
|.+||+|||+++....|-. ++....-|.+|.+|.++.+. .-|+...|+||.|||++|+.. |.|
T Consensus 138 gelkladfglarafgipvr-------cysaevvtlwyrppdvlfga---------kly~tsidmwsagcifaelanagrp 201 (292)
T KOG0662|consen 138 GELKLADFGLARAFGIPVR-------CYSAEVVTLWYRPPDVLFGA---------KLYSTSIDMWSAGCIFAELANAGRP 201 (292)
T ss_pred CcEEecccchhhhcCCceE-------eeeceeeeeeccCcceeeee---------ehhccchHhhhcchHHHHHhhcCCC
Confidence 9999999999998765532 33445568999999998743 357889999999999999986 599
Q ss_pred CCCchHHH----HHHhcC----------------CCCCcccCC---------CCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 159 FFELSHLL----AYRRGQ----------------YDPSQHLEK---------IPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 159 pf~~~~~~----~~~~~~----------------~~~~~~l~~---------~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
.|.+.+.. .+.+.. |.+.+..+. ..+..-++|++++|.-+|.+|++|++++
T Consensus 202 lfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaal 281 (292)
T KOG0662|consen 202 LFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAAL 281 (292)
T ss_pred CCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHh
Confidence 99765432 221111 111111110 1123568999999999999999999999
Q ss_pred HHhhcccCCCCCChh
Q 000470 210 QNYAAVVFPTYFSPF 224 (1472)
Q Consensus 210 ~~~~~~~fp~~f~~~ 224 (1472)
+| +||..|
T Consensus 282 qh-------pyf~d~ 289 (292)
T KOG0662|consen 282 QH-------PYFSDF 289 (292)
T ss_pred cC-------cccccc
Confidence 98 666553
No 157
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.94 E-value=1e-26 Score=271.33 Aligned_cols=193 Identities=18% Similarity=0.222 Sum_probs=157.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++.++++...|+||||++ |+|.+++... ..+++.++..++.|++.||.|||+.||+||||||+||+++
T Consensus 57 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~ 136 (285)
T cd05605 57 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD 136 (285)
T ss_pred cCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEEC
Confidence 579999999999999999999999999 6999887543 4589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+++.++|+|||+++..... . ......|++.|+|||.+. +..++.++||||+||++|||++|.
T Consensus 137 ~~~~~~l~Dfg~~~~~~~~--~------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Diws~G~~l~el~~g~ 198 (285)
T cd05605 137 DYGHIRISDLGLAVEIPEG--E------TIRGRVGTVGYMAPEVVK----------NERYTFSPDWWGLGCLIYEMIEGK 198 (285)
T ss_pred CCCCEEEeeCCCceecCCC--C------ccccccCCCCccCcHHhc----------CCCCCccccchhHHHHHHHHHHCC
Confidence 9999999999988754211 0 112345788999999774 335788999999999999999999
Q ss_pred CCCCchHH----HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 158 PFFELSHL----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
+||..... ..+...........+...+..+++||.+||+.||++|| +++++++|
T Consensus 199 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 199 SPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred CCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 99975432 11222222222234445678899999999999999999 89999998
No 158
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.94 E-value=9.9e-27 Score=281.86 Aligned_cols=196 Identities=16% Similarity=0.151 Sum_probs=155.9
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-------------------------------------------
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP------------------------------------------- 37 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~------------------------------------------- 37 (1472)
+||||+++++++......|+||||+. |+|.+++...
T Consensus 100 ~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (374)
T cd05106 100 QHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSD 179 (374)
T ss_pred cCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccc
Confidence 79999999999999999999999999 7999988532
Q ss_pred ---------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEEecccc
Q 000470 38 ---------------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASF 90 (1472)
Q Consensus 38 ---------------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a 90 (1472)
..+++.++..++.||+.||.|||++||+||||||+|||++.++.++|+|||++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla 259 (374)
T cd05106 180 TYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLA 259 (374)
T ss_pred cccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceee
Confidence 13678889999999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCchH----H
Q 000470 91 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----L 165 (1472)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~----~ 165 (1472)
+...... .. ....+..++..|+|||.+. ...++.++||||+||++|||++ |++||.... .
T Consensus 260 ~~~~~~~----~~-~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~ 324 (374)
T cd05106 260 RDIMNDS----NY-VVKGNARLPVKWMAPESIF----------DCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKF 324 (374)
T ss_pred eeccCCc----ce-eeccCCCCccceeCHHHhc----------CCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHH
Confidence 7542211 11 1122334456799999764 3467889999999999999997 898986432 2
Q ss_pred HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 166 LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 166 ~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
......... ...+...+++++++|.+||+.||++||+++++++.++.
T Consensus 325 ~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 325 YKMVKRGYQ--MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred HHHHHcccC--ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 222222222 22344456889999999999999999999999988653
No 159
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=8.3e-28 Score=259.50 Aligned_cols=194 Identities=18% Similarity=0.189 Sum_probs=166.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+.||.+..+...|++..++|+||||+. |.|+-.++....+++...+++...|+.||.|||+++||.||||.||+|++.+
T Consensus 225 ~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkD 304 (516)
T KOG0690|consen 225 CRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKD 304 (516)
T ss_pred ccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccC
Confidence 579999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|++||+|||++|... .+.....+.||||.|+|||++. +..|+.++|.|.+|+++|||++|+.|
T Consensus 305 GHIKitDFGLCKE~I-------~~g~t~kTFCGTPEYLAPEVle----------DnDYgraVDWWG~GVVMYEMmCGRLP 367 (516)
T KOG0690|consen 305 GHIKITDFGLCKEEI-------KYGDTTKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGVGVVMYEMMCGRLP 367 (516)
T ss_pred CceEeeecccchhcc-------cccceeccccCChhhcCchhhc----------cccccceeehhhhhHHHHHHHhccCc
Confidence 999999999998542 2233457889999999999775 55789999999999999999999888
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|...+..++..-..-....+|...+++++.|+..+|.+||.+|. .|.|+.+|
T Consensus 368 Fyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 368 FYNKDHEKLFELILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred ccccchhHHHHHHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 86554443333233333446777788999999999999999998 46777777
No 160
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.94 E-value=1.7e-26 Score=266.49 Aligned_cols=200 Identities=18% Similarity=0.166 Sum_probs=160.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|++|||++ ++|.+++...+.+++..++.++.|++.||+|||++|++||||||+||+++++
T Consensus 63 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~ 142 (267)
T cd06628 63 LQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNK 142 (267)
T ss_pred cCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCC
Confidence 579999999999999999999999998 5999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++......... ..........++..|+|||.+. +..++.++|+||+||++|+|++|+.|
T Consensus 143 ~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p 211 (267)
T cd06628 143 GGIKISDFGISKKLEANSLST-KTNGARPSLQGSVFWMAPEVVK----------QTSYTRKADIWSLGCLVVEMLTGKHP 211 (267)
T ss_pred CCEEecccCCCcccccccccC-CccccccccCCCcCccChhHhc----------cCCCCchhhhHHHHHHHHHHhhCCCC
Confidence 999999999987653211110 0111112334678899999764 33567889999999999999999888
Q ss_pred CCchH-HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH-LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~-~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.... ...+........+.++...+..++++|.+||+.||.+||++.|+++|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 212 FPDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred CCCccHHHHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 86432 22222221222233455567889999999999999999999999998
No 161
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.94 E-value=1.3e-26 Score=265.66 Aligned_cols=197 Identities=19% Similarity=0.172 Sum_probs=160.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP---------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 70 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~---------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLK 70 (1472)
++||||+++++++..+...|+||||++ ++|.+++... ..+++.++..++.|++.||.|||++||+|||||
T Consensus 53 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~ 132 (262)
T cd00192 53 LGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLA 132 (262)
T ss_pred cCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccC
Confidence 579999999999999999999999997 7999999875 679999999999999999999999999999999
Q ss_pred CCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 71 CENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 71 peNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
|+||+++.++.++|+|||.+........ ........++..|+|||.+. ...++.++||||+||++
T Consensus 133 p~nili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il 197 (262)
T cd00192 133 ARNCLVGEDLVVKISDFGLSRDVYDDDY-----YRKKTGGKLPIRWMAPESLK----------DGIFTSKSDVWSFGVLL 197 (262)
T ss_pred cceEEECCCCcEEEcccccccccccccc-----cccccCCCcCccccCHHHhc----------cCCcchhhccHHHHHHH
Confidence 9999999999999999999876543211 01112334577899999764 23678899999999999
Q ss_pred HHHHh-CCCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 151 AELFL-EVPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 151 ~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
|||++ |.+||.......+..... ......+...+..+.+++.+||..||++||+++|+++++
T Consensus 198 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 198 WEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 99999 599987554332221111 222234445578899999999999999999999999885
No 162
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=7.8e-27 Score=291.76 Aligned_cols=196 Identities=22% Similarity=0.225 Sum_probs=157.8
Q ss_pred CCCCCcceeeEEEEeCC--------eEEEEecccC-CcHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 000470 1 MSSTPCVHKKFWQETDK--------AAYLLRQYFF-NSLRDRLSTP----PFLSLVEKKWLAFQLLLAVKQCHEKGICHG 67 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~--------~~~lV~Ey~~-gsL~d~l~~~----~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~ 67 (1472)
++|+||++++..+.... .+++||||+. |+|.+++..+ ..+++.++..++.|++.||.|||++||+||
T Consensus 88 ~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHr 167 (496)
T PTZ00283 88 CDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHR 167 (496)
T ss_pred CCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence 57999999988775432 4789999999 7999998653 458999999999999999999999999999
Q ss_pred CCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 68 DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
||||+|||++.++.+||+|||+++........ ....+.+|++.|+|||.+. +..++.++||||||
T Consensus 168 DLKP~NILl~~~~~vkL~DFGls~~~~~~~~~-----~~~~~~~Gt~~Y~aPE~~~----------~~~~s~k~DVwSlG 232 (496)
T PTZ00283 168 DIKSANILLCSNGLVKLGDFGFSKMYAATVSD-----DVGRTFCGTPYYVAPEIWR----------RKPYSKKADMFSLG 232 (496)
T ss_pred CCCHHHEEEeCCCCEEEEecccCeeccccccc-----cccccccCCcceeCHHHhC----------CCCCCcHHHHHHHH
Confidence 99999999999999999999998755322111 1123456899999999875 34678999999999
Q ss_pred HHHHHHHhCCCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 148 CVIAELFLEVPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 148 ~il~eLltg~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|++|||++|++||............. .....++...++.+++++.+||+.||++||++.++++|
T Consensus 233 vilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 233 VLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 99999999999997655443322111 11223455667899999999999999999999999998
No 163
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.94 E-value=1.2e-26 Score=256.99 Aligned_cols=264 Identities=20% Similarity=0.304 Sum_probs=212.8
Q ss_pred CCCCccccc-ceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCC
Q 000470 1040 PDSGWRPRG-ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1040 ~~~~W~p~G-~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~ 1118 (1472)
...+|+-.+ ..-..+++|..+|.++.|++++.+++||+.||.||+|+..-.. ....+..|...|.+++|+|+.
T Consensus 119 EFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn------Vk~~~ahh~eaIRdlafSpnD 192 (464)
T KOG0284|consen 119 EFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN------VKIIQAHHAEAIRDLAFSPND 192 (464)
T ss_pred cEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh------hHHhhHhhhhhhheeccCCCC
Confidence 456787533 2335678999999999999999999999999999999976422 111223454789999999999
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
..|++|++||+|+|||....+ .-+ ....||.-+.++.|+|. ...+++++.|..|++||.|+++
T Consensus 193 skF~t~SdDg~ikiWdf~~~k-------------ee~-vL~GHgwdVksvdWHP~---kgLiasgskDnlVKlWDprSg~ 255 (464)
T KOG0284|consen 193 SKFLTCSDDGTIKIWDFRMPK-------------EER-VLRGHGWDVKSVDWHPT---KGLIASGSKDNLVKLWDPRSGS 255 (464)
T ss_pred ceeEEecCCCeEEEEeccCCc-------------hhh-eeccCCCCcceeccCCc---cceeEEccCCceeEeecCCCcc
Confidence 999999999999999986311 111 12578888999999998 5599999999999999999999
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEE
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1278 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~ 1278 (1472)
++.++.. |...|+.+.|.|+++||++++.|..++++|+|..+.+..++. |...++++.| +|... .++.
T Consensus 256 cl~tlh~--HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~-Hkkdv~~~~W-hP~~~--------~lft 323 (464)
T KOG0284|consen 256 CLATLHG--HKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRG-HKKDVTSLTW-HPLNE--------SLFT 323 (464)
T ss_pred hhhhhhh--ccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhc-chhhheeecc-ccccc--------ccee
Confidence 9999876 889999999999999999999999999999998877777664 6678999999 88653 4788
Q ss_pred EEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEec
Q 000470 1279 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1358 (1472)
Q Consensus 1279 vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1358 (1472)
+|+.||.|..|.+...+.+.. ...+|...|++++
T Consensus 324 sgg~Dgsvvh~~v~~~~p~~~----------------------------------------------i~~AHd~~iwsl~ 357 (464)
T KOG0284|consen 324 SGGSDGSVVHWVVGLEEPLGE----------------------------------------------IPPAHDGEIWSLA 357 (464)
T ss_pred eccCCCceEEEeccccccccC----------------------------------------------CCcccccceeeee
Confidence 888999999999862111100 1245677999999
Q ss_pred cCCCCc-EEEccCCCeEEEEeCCCCCC
Q 000470 1359 PLPGGD-LLTGGTDLKIRRWDHCSPGR 1384 (1472)
Q Consensus 1359 ~~p~g~-llTgg~Dg~IrlWDl~~~~~ 1384 (1472)
|+|=|. |+||+.|+++|||.-..+..
T Consensus 358 ~hPlGhil~tgsnd~t~rfw~r~rp~d 384 (464)
T KOG0284|consen 358 YHPLGHILATGSNDRTVRFWTRNRPGD 384 (464)
T ss_pred ccccceeEeecCCCcceeeeccCCCCC
Confidence 999995 55999999999998766543
No 164
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.94 E-value=1.6e-26 Score=264.36 Aligned_cols=198 Identities=16% Similarity=0.113 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ ++|.+++... +.+++.+++.++.|++.||.|||++||+||||||+||+++.
T Consensus 50 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~ 129 (252)
T cd05084 50 YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTE 129 (252)
T ss_pred CCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcC
Confidence 589999999999999999999999998 6999999764 46899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.+..... ............+..|+|||.+. ...++.++|||||||++|||++ |.
T Consensus 130 ~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~e~~~~~~ 194 (252)
T cd05084 130 KNVLKISDFGMSREEED-----GVYASTGGMKQIPVKWTAPEALN----------YGRYSSESDVWSFGILLWEAFSLGA 194 (252)
T ss_pred CCcEEECccccCccccc-----ccccccCCCCCCceeecCchhhc----------CCCCChHHHHHHHHHHHHHHHhCCC
Confidence 99999999998764321 11111111112245699999764 3357889999999999999998 78
Q ss_pred CCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+||.......... .........+...+..+.+|+.+||+.||++||++.++++.+.
T Consensus 195 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 195 VPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 8885332222111 1111122344556788999999999999999999999998753
No 165
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.94 E-value=1.3e-26 Score=272.22 Aligned_cols=194 Identities=14% Similarity=0.057 Sum_probs=153.3
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
+||||+++++++......|++|||++ ++|.+++...+ .+++..++.++.|++.||+|||++||
T Consensus 61 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~i 140 (297)
T cd05089 61 HHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQF 140 (297)
T ss_pred CCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 69999999999999999999999998 79999996532 47889999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||++.++.+||+|||++...... ........+..|+|||.+. ...++.++|||
T Consensus 141 vH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dvw 202 (297)
T cd05089 141 IHRDLAARNVLVGENLASKIADFGLSRGEEVY--------VKKTMGRLPVRWMAIESLN----------YSVYTTKSDVW 202 (297)
T ss_pred ccCcCCcceEEECCCCeEEECCcCCCccccce--------eccCCCCcCccccCchhhc----------cCCCCchhhHH
Confidence 99999999999999999999999987532110 0001112245699999764 33578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
||||++|||++ |.+||........ ...........+...+..+++||.+||+.+|.+||+++++++.+.
T Consensus 203 SlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 273 (297)
T cd05089 203 SFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLS 273 (297)
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 99999999997 8888865433222 111111122244556788999999999999999999999987754
No 166
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.94 E-value=2.4e-27 Score=251.45 Aligned_cols=194 Identities=14% Similarity=0.116 Sum_probs=156.0
Q ss_pred CCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEccCC
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~~~~ 80 (1472)
+|.||+.+++|.++...++.||.|..-+..+++. .+.++|.-+-.+...+++||.||-+ +||+|||+||+|||++..|
T Consensus 150 cpyIV~c~GyFi~n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G 229 (391)
T KOG0983|consen 150 CPYIVQCFGYFITNTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG 229 (391)
T ss_pred CCeeeeeeeEEeeCchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC
Confidence 6999999999999999999999998655555543 3458999999999999999999996 6999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
++||||||++..... +.....+.|.+.|||||++... ....|+-++||||||++++||.||+.||
T Consensus 230 niKlCDFGIsGrlvd--------SkAhtrsAGC~~YMaPERidp~-------~~~kYDiRaDVWSlGITlveLaTg~yPy 294 (391)
T KOG0983|consen 230 NIKLCDFGISGRLVD--------SKAHTRSAGCAAYMAPERIDPP-------DKPKYDIRADVWSLGITLVELATGQYPY 294 (391)
T ss_pred CEEeecccccceeec--------ccccccccCCccccCccccCCC-------CCCccchhhhhhhhccchhhhhcccCCC
Confidence 999999999865521 1122445678899999998632 2457899999999999999999999999
Q ss_pred Cch--HHHHHHhcCCCCCcccCC--CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 161 ELS--HLLAYRRGQYDPSQHLEK--IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 161 ~~~--~~~~~~~~~~~~~~~l~~--~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+. ++..+.+......+.++. ..++.+++|+..||.+|+.+||...++|+|
T Consensus 295 ~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 295 KGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 763 222222211121122332 478999999999999999999999999998
No 167
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.94 E-value=1.3e-26 Score=265.40 Aligned_cols=194 Identities=19% Similarity=0.160 Sum_probs=158.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..++..|+||||++ ++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++
T Consensus 56 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~ 135 (256)
T cd08529 56 LDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD 135 (256)
T ss_pred cCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe
Confidence 579999999999999999999999998 6999999763 5689999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||+++...... .......+++.|+|||.+. ...++.++|+|||||++++|++|+
T Consensus 136 ~~~~~~l~df~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~~l~~g~ 198 (256)
T cd08529 136 AYDNVKIGDLGVAKLLSDNT-------NFANTIVGTPYYLSPELCE----------DKPYNEKSDVWALGVVLYECCTGK 198 (256)
T ss_pred CCCCEEEcccccceeccCcc-------chhhccccCccccCHHHhc----------CCCCCCccchHHHHHHHHHHHhCC
Confidence 99999999999887553211 1123445778899999765 335678999999999999999999
Q ss_pred CCCCchHHHHHH-hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSHLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.||......... ..........+...+..+.++|.+||+.+|++||++.++++|
T Consensus 199 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 199 HPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 898655432221 111111222333567889999999999999999999999987
No 168
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.94 E-value=1.6e-26 Score=266.71 Aligned_cols=198 Identities=21% Similarity=0.166 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||++ ++|.+++..+..+++.++..++.|++.||+|||++||+||||||+||+++.+
T Consensus 63 ~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~ 142 (267)
T cd06646 63 CKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDN 142 (267)
T ss_pred cCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC
Confidence 479999999999999999999999999 6999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||+++........ .....++..|+|||.+... ....++.++|+||+||++|||++|.+|
T Consensus 143 ~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~-------~~~~~~~~~Dvws~G~il~el~~g~~p 208 (267)
T cd06646 143 GDVKLADFGVAAKITATIAK-------RKSFIGTPYWMAPEVAAVE-------KNGGYNQLCDIWAVGITAIELAELQPP 208 (267)
T ss_pred CCEEECcCccceeecccccc-------cCccccCccccCHhHcccc-------cCCCCcchhhHHHHHHHHHHHHhCCCC
Confidence 99999999998755211100 1123467789999977421 133567899999999999999999877
Q ss_pred CCchH-HHHHH---hcCCCCC-cccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 160 FELSH-LLAYR---RGQYDPS-QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 160 f~~~~-~~~~~---~~~~~~~-~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
|.... ..... .....+. .......+..+++||.+||..||++||+++++++|+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 209 MFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 74322 21111 1111111 111123467899999999999999999999999884
No 169
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.94 E-value=1.6e-26 Score=268.73 Aligned_cols=192 Identities=17% Similarity=0.209 Sum_probs=159.9
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++++++.+...|+||||+. |+|.+++...+.+++.+++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 55 ~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~ 134 (278)
T cd05606 55 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 134 (278)
T ss_pred CCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCC
Confidence 69999999999999999999999999 69999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||.++...... .....|+..|+|||.+.. +..++.++||||+||++|||++|..||
T Consensus 135 ~~kl~dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~s~G~~l~~l~~g~~p~ 196 (278)
T cd05606 135 HVRISDLGLACDFSKKK---------PHASVGTHGYMAPEVLQK---------GVAYDSSADWFSLGCMLFKLLRGHSPF 196 (278)
T ss_pred CEEEccCcCccccCccC---------CcCcCCCcCCcCcHHhcC---------CCCCCcccchHhHHHHHHHHHhCCCCC
Confidence 99999999886542111 123457889999997641 235788999999999999999999898
Q ss_pred Cch---HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 161 ELS---HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 161 ~~~---~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
... ...............++...+..+.++|.+||..+|.+|| ++.++++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 197 RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 644 2222222222223345556678999999999999999999 99999988
No 170
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.94 E-value=1.5e-26 Score=267.00 Aligned_cols=197 Identities=19% Similarity=0.159 Sum_probs=156.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.+..+...|++|||++ ++|.+++...+.+++.+++.++.|++.||+|||++||+|+||||+||+++.+
T Consensus 63 l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~ 142 (267)
T cd06645 63 CKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDN 142 (267)
T ss_pred CCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 579999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+......... .....|+..|+|||.+... ....++.++|+||+||++|+|++|.+|
T Consensus 143 ~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~-------~~~~~~~~~DvwSlG~il~~l~~~~~p 208 (267)
T cd06645 143 GHVKLADFGVSAQITATIAK-------RKSFIGTPYWMAPEVAAVE-------RKGGYNQLCDIWAVGITAIELAELQPP 208 (267)
T ss_pred CCEEECcceeeeEccCcccc-------cccccCcccccChhhhccc-------cCCCCCchhhhHHHHHHHHHHhcCCCC
Confidence 99999999987654211110 1223467889999987421 234578899999999999999999777
Q ss_pred CCc-hHHH---HHHhcCCCCCccc-CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FEL-SHLL---AYRRGQYDPSQHL-EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~-~~~~---~~~~~~~~~~~~l-~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.. .... ........+.... ....+..++++|.+||..||++||+++++++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 209 MFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred cccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 743 2211 1222222221111 11245679999999999999999999999988
No 171
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.94 E-value=2.3e-26 Score=267.69 Aligned_cols=198 Identities=15% Similarity=0.099 Sum_probs=155.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP---------------PFLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~---------------~~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
++||||+++++++..+...|++|||++ ++|.+++... ..+++..+..++.||+.||+|||++||
T Consensus 64 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i 143 (280)
T cd05092 64 LQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHF 143 (280)
T ss_pred CCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 579999999999999999999999999 6999998753 247899999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||+++++.++|+|||+++...... .........+++.|+|||.+. +..++.++|||
T Consensus 144 ~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~ 208 (280)
T cd05092 144 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-----YYRVGGRTMLPIRWMPPESIL----------YRKFTTESDIW 208 (280)
T ss_pred ecccccHhhEEEcCCCCEEECCCCceeEcCCCc-----eeecCCCccccccccCHHHhc----------cCCcCchhhHH
Confidence 999999999999999999999999887542111 111112223457799999764 34578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchH-HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 145 AVGCVIAELFL-EVPFFELSH-LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~-~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
||||++|||++ |.+||.... ...+...........+...++.+.+||.+||+.||.+||+++|+++.+.
T Consensus 209 slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 209 SFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 99999999998 788885332 2222111111112233455678999999999999999999999998753
No 172
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.94 E-value=1.9e-26 Score=266.32 Aligned_cols=197 Identities=14% Similarity=0.057 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ |+|.+++... ..+++.+++.++.||+.||+|||++|++||||||+|||++.
T Consensus 63 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~ 142 (266)
T cd05064 63 FDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNS 142 (266)
T ss_pred CCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcC
Confidence 579999999999999999999999999 6999998764 56899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++++|||.+...... .........++..|+|||.+. ...++.++||||+||++||+++ |.
T Consensus 143 ~~~~~l~dfg~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~ell~~g~ 206 (266)
T cd05064 143 DLVCKISGFRRLQEDKSE------AIYTTMSGKSPVLWAAPEAIQ----------YHHFSSASDVWSFGIVMWEVMSYGE 206 (266)
T ss_pred CCcEEECCCccccccccc------chhcccCCCCceeecCHHHHh----------hCCccchhHHHHHHHHHHHHhcCCC
Confidence 999999999976542110 001111233456799999764 3467889999999999999875 88
Q ss_pred CCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+||.......... .........+...+..+.+++.+||+.+|++||+++|+++.+.
T Consensus 207 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~ 263 (266)
T cd05064 207 RPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILS 263 (266)
T ss_pred CCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHH
Confidence 8886433222111 1111112234556778999999999999999999999998754
No 173
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.94 E-value=1.6e-26 Score=280.18 Aligned_cols=196 Identities=13% Similarity=0.149 Sum_probs=155.6
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC------------------------------------------
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP------------------------------------------ 38 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~------------------------------------------ 38 (1472)
.||||+++++++..+...|+||||++ |+|.+++..+.
T Consensus 97 ~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (375)
T cd05104 97 NHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVS 176 (375)
T ss_pred CCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcc
Confidence 69999999999999999999999999 79999986421
Q ss_pred ---------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEE
Q 000470 39 ---------------------------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLS 85 (1472)
Q Consensus 39 ---------------------------------~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~ 85 (1472)
.+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~ 256 (375)
T cd05104 177 YVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKIC 256 (375)
T ss_pred cccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEe
Confidence 36788899999999999999999999999999999999999999999
Q ss_pred eccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCch-
Q 000470 86 DFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELS- 163 (1472)
Q Consensus 86 DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~- 163 (1472)
|||+++....... . ....+..++..|+|||.+. +..++.++|||||||++|||++ |.+||...
T Consensus 257 DfG~a~~~~~~~~----~-~~~~~~~~~~~y~aPE~~~----------~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~ 321 (375)
T cd05104 257 DFGLARDIRNDSN----Y-VVKGNARLPVKWMAPESIF----------NCVYTFESDVWSYGILLWEIFSLGSSPYPGMP 321 (375)
T ss_pred cCccceeccCccc----c-cccCCCCCCcceeChhHhc----------CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence 9999875422110 0 1112233456799999764 3467889999999999999998 78888542
Q ss_pred ---HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 164 ---HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 164 ---~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
...+....... ...+...+.++++||.+||+.||++||++.|+++.++.
T Consensus 322 ~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 322 VDSKFYKMIKEGYR--MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred chHHHHHHHHhCcc--CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 22223222222 12334556789999999999999999999999998653
No 174
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.94 E-value=1.8e-26 Score=268.76 Aligned_cols=198 Identities=14% Similarity=0.098 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKG 63 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~g 63 (1472)
++||||+++++++.+....++++||+. ++|.+++..+ ..+++.++..++.|++.||+|||++|
T Consensus 65 l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g 144 (283)
T cd05091 65 LQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH 144 (283)
T ss_pred CCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999 6999998532 34788899999999999999999999
Q ss_pred CeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchH
Q 000470 64 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 143 (1472)
Q Consensus 64 IvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DI 143 (1472)
|+||||||+||+++.++.+||+|||+++...... .........+++.|+|||.+. ...++.++||
T Consensus 145 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv 209 (283)
T cd05091 145 VVHKDLATRNVLVFDKLNVKISDLGLFREVYAAD-----YYKLMGNSLLPIRWMSPEAIM----------YGKFSIDSDI 209 (283)
T ss_pred ccccccchhheEecCCCceEecccccccccccch-----heeeccCccCCccccCHHHHh----------cCCCCcchhH
Confidence 9999999999999999999999999887543211 111223444577899999764 2357889999
Q ss_pred HHHHHHHHHHHh-CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 144 FAVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 144 wSlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|||||++|||++ |.+||............ .......+...+..+.+|+.+||+.+|++||++.+++..++
T Consensus 210 ~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 210 WSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 999999999998 78888643332222111 11112234456678999999999999999999999998864
No 175
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.94 E-value=1.7e-26 Score=270.23 Aligned_cols=191 Identities=20% Similarity=0.209 Sum_probs=159.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||+. ++|.+++.....+++.++..++.||+.||.|||++||+||||||+||+++.+
T Consensus 58 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~ 137 (290)
T cd05580 58 IRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSD 137 (290)
T ss_pred CCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCC
Confidence 479999999999999999999999996 7999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||+++..... .....+++.|+|||.+. ....+.++||||||+++|+|++|.+|
T Consensus 138 ~~~kl~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p 197 (290)
T cd05580 138 GYIKITDFGFAKRVKGR----------TYTLCGTPEYLAPEIIL----------SKGYGKAVDWWALGILIYEMLAGYPP 197 (290)
T ss_pred CCEEEeeCCCccccCCC----------CCCCCCCccccChhhhc----------CCCCCccccHHHHHHHHHHHHhCCCC
Confidence 99999999998765221 12335678899999764 23567889999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|..................++...+..++++|.+||..||.+|+ +++|+++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 198 FFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred CCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 86554332222111222334555678999999999999999999 89999988
No 176
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.94 E-value=2.7e-26 Score=266.75 Aligned_cols=198 Identities=14% Similarity=0.091 Sum_probs=155.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--------------PFLSLVEKKWLAFQLLLAVKQCHEKGIC 65 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--------------~~l~~~~~~~i~~Qll~aL~~LH~~gIv 65 (1472)
++||||+++++++..+...|+||||++ ++|.+++... ..+++.++..++.|++.||+|||++|++
T Consensus 65 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~ 144 (280)
T cd05049 65 FQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFV 144 (280)
T ss_pred cCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCee
Confidence 579999999999999999999999999 6999999653 3478899999999999999999999999
Q ss_pred ecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHH
Q 000470 66 HGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFA 145 (1472)
Q Consensus 66 H~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwS 145 (1472)
||||||+||+++.++.++|+|||.++....... ...-....++..|+|||.+. ...++.++||||
T Consensus 145 h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~s 209 (280)
T cd05049 145 HRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDY-----YRVGGHTMLPIRWMPPESIM----------YRKFTTESDVWS 209 (280)
T ss_pred ccccccceEEEcCCCeEEECCcccceecccCcc-----eecCCCCcccceecChhhhc----------cCCcchhhhHHH
Confidence 999999999999999999999999875422111 00112223467799999774 346788999999
Q ss_pred HHHHHHHHHh-CCCCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 146 VGCVIAELFL-EVPFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 146 lG~il~eLlt-g~~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|||++|||++ |..||........ ...........+...+..+++++.+||+.||++||++.|+++.+.
T Consensus 210 lG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 210 FGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 9999999998 8888743322221 111111111233456678999999999999999999999998753
No 177
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.94 E-value=2e-26 Score=267.66 Aligned_cols=198 Identities=13% Similarity=0.065 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DL 69 (1472)
++||||+++++++..+...|+||||++ |+|.+++... ..++...+..++.|++.||.|||+.|++||||
T Consensus 66 l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dl 145 (277)
T cd05062 66 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDL 145 (277)
T ss_pred CCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCc
Confidence 579999999999999999999999999 6999998652 12567888999999999999999999999999
Q ss_pred CCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
||+||++++++.++|+|||+++....... ........++..|+|||.+. ...++.++|||||||+
T Consensus 146 kp~Nil~~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~ 210 (277)
T cd05062 146 AARNCMVAEDFTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMSPESLK----------DGVFTTYSDVWSFGVV 210 (277)
T ss_pred chheEEEcCCCCEEECCCCCccccCCcce-----eecCCCCccCHhhcChhHhh----------cCCcCchhHHHHHHHH
Confidence 99999999999999999998875422110 00011223466799999764 3457889999999999
Q ss_pred HHHHHh-CCCCCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 150 IAELFL-EVPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 150 l~eLlt-g~~pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+|||++ |.+||........... ........+...+..+++++.+||+.||++||++.|+++++.
T Consensus 211 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 211 LWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 999999 5888865443332211 111112234455678999999999999999999999998854
No 178
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.94 E-value=3.9e-27 Score=277.43 Aligned_cols=190 Identities=17% Similarity=0.223 Sum_probs=160.5
Q ss_pred CCCCCcceeeEEEEeCC--eEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDK--AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~--~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~g--IvH~DLKpeNIL 75 (1472)
|+||||++||.++.+.. .+.+|+|++. |+|..|+++.+.++...++.|++|||+||.|||++. |+|||||.+||+
T Consensus 98 L~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIF 177 (632)
T KOG0584|consen 98 LKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIF 177 (632)
T ss_pred CCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEE
Confidence 78999999999998755 5899999999 899999999889999999999999999999999985 999999999999
Q ss_pred EccC-CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 76 VTSW-NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 76 v~~~-~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
|+.. |.|||+|+|+|...... ......|||.|||||++. ..|+..+||||||+++.||+
T Consensus 178 inG~~G~VKIGDLGLAtl~r~s---------~aksvIGTPEFMAPEmYE-----------E~YnE~VDVYaFGMCmLEMv 237 (632)
T KOG0584|consen 178 VNGNLGEVKIGDLGLATLLRKS---------HAKSVIGTPEFMAPEMYE-----------ENYNELVDVYAFGMCMLEMV 237 (632)
T ss_pred EcCCcCceeecchhHHHHhhcc---------ccceeccCccccChHHHh-----------hhcchhhhhhhhhHHHHHHH
Confidence 9864 89999999999765321 113357999999999763 47899999999999999999
Q ss_pred hCCCCCCc-hHH-HHHHhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 155 LEVPFFEL-SHL-LAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 155 tg~~pf~~-~~~-~~~~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|+..||.. ... .-|++-... .+..+.++.++++++||.+||.. .++|+|+.|+|+|
T Consensus 238 T~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 238 TSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred hccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 99888853 222 233332222 23357788899999999999999 9999999999998
No 179
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.94 E-value=2.3e-26 Score=264.98 Aligned_cols=198 Identities=15% Similarity=0.109 Sum_probs=157.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|++|||++ ++|.+++... ..+++..+++++.|++.||.|||++|++||||||+||+++
T Consensus 59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~ 138 (263)
T cd05052 59 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 138 (263)
T ss_pred CCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc
Confidence 579999999999999999999999998 6999998653 3589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
+++.+||+|||.+........ . .......+..|+|||.+. +..++.++|||||||++|||++ |
T Consensus 139 ~~~~~kl~df~~~~~~~~~~~-----~-~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~t~g 202 (263)
T cd05052 139 ENHLVKVADFGLSRLMTGDTY-----T-AHAGAKFPIKWTAPESLA----------YNKFSIKSDVWAFGVLLWEIATYG 202 (263)
T ss_pred CCCcEEeCCCcccccccccee-----e-ccCCCCCccccCCHHHhc----------cCCCCchhHHHHHHHHHHHHHcCC
Confidence 999999999999875422110 0 001122345699999764 3467889999999999999998 8
Q ss_pred CCCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 157 VPFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.+||.......... .........+...+..+.++|.+||+.||++||++.++++.+..
T Consensus 203 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 203 MSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 88886544332211 11112223445567889999999999999999999999988643
No 180
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.94 E-value=1.8e-25 Score=263.46 Aligned_cols=298 Identities=15% Similarity=0.265 Sum_probs=239.9
Q ss_pred cccceeeeccccccceeEEEE-cCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEE
Q 000470 1046 PRGILVAHLQEHCSAVNEIAI-SHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVG 1124 (1472)
Q Consensus 1046 p~G~lV~~l~~H~~~V~~laf-spd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~ 1124 (1472)
-+++++.++-|..+.|..++| .|+.+++|.|++.+.+|++++.++.+ ..+.+|...|.++.....|..|++|
T Consensus 311 ~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c-------~ii~GH~e~vlSL~~~~~g~llat~ 383 (775)
T KOG0319|consen 311 DELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYC-------QIIPGHTEAVLSLDVWSSGDLLATG 383 (775)
T ss_pred cccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCce-------EEEeCchhheeeeeecccCcEEEEe
Confidence 357888999999999999998 56778999999999999999988762 3788999999999966677899999
Q ss_pred eCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccc---
Q 000470 1125 ACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW--- 1201 (1472)
Q Consensus 1125 s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~--- 1201 (1472)
|+|.++++|+++... .....+.. ...|...+.+++++....+ +|++++.|+++++|+++..+...
T Consensus 384 sKD~svilWr~~~~~---------~~~~~~a~-~~gH~~svgava~~~~~as--ffvsvS~D~tlK~W~l~~s~~~~~~~ 451 (775)
T KOG0319|consen 384 SKDKSVILWRLNNNC---------SKSLCVAQ-ANGHTNSVGAVAGSKLGAS--FFVSVSQDCTLKLWDLPKSKETAFPI 451 (775)
T ss_pred cCCceEEEEEecCCc---------chhhhhhh-hcccccccceeeecccCcc--EEEEecCCceEEEecCCCcccccccc
Confidence 999999999995211 11111222 2234555666677666544 99999999999999998722111
Q ss_pred ee----ecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEE
Q 000470 1202 TL----KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLI 1277 (1472)
Q Consensus 1202 ~l----~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l 1277 (1472)
.+ ....|...|+|++++|+...++|||.|.+.++|++........+. +|..++.++.| +|..+ .+
T Consensus 452 ~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLs-GH~RGvw~V~F-s~~dq---------~l 520 (775)
T KOG0319|consen 452 VLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLS-GHTRGVWCVSF-SKNDQ---------LL 520 (775)
T ss_pred eehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEee-CCccceEEEEe-ccccc---------ee
Confidence 11 223488899999999999999999999999999999666666655 47788999999 77655 79
Q ss_pred EEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEe
Q 000470 1278 YVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1357 (1472)
Q Consensus 1278 ~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl 1357 (1472)
+++++|.+|+||.++++.|.++|.. |...|-.+
T Consensus 521 aT~SgD~TvKIW~is~fSClkT~eG-----------------------------------------------H~~aVlra 553 (775)
T KOG0319|consen 521 ATCSGDKTVKIWSISTFSCLKTFEG-----------------------------------------------HTSAVLRA 553 (775)
T ss_pred EeccCCceEEEEEeccceeeeeecC-----------------------------------------------ccceeEee
Confidence 9999999999999999999999863 33356666
Q ss_pred ccCCCC-cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhc
Q 000470 1358 LPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAAT 1436 (1472)
Q Consensus 1358 ~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 1436 (1472)
.|-.+| .|++||.||-|++|++++.++...+
T Consensus 554 ~F~~~~~qliS~~adGliKlWnikt~eC~~tl------------------------------------------------ 585 (775)
T KOG0319|consen 554 SFIRNGKQLISAGADGLIKLWNIKTNECEMTL------------------------------------------------ 585 (775)
T ss_pred eeeeCCcEEEeccCCCcEEEEeccchhhhhhh------------------------------------------------
Confidence 776666 8999999999999999988775422
Q ss_pred CCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1437 DSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1437 ~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
..|.|.|++++ .++...|++||+.||.|.+|+
T Consensus 586 ---D~H~DrvWaL~-~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 586 ---DAHNDRVWALS-VSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred ---hhccceeEEEe-ecCccceeEecCCCeEEEEee
Confidence 24999999996 788888999999999999996
No 181
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.94 E-value=2.6e-26 Score=263.55 Aligned_cols=196 Identities=14% Similarity=0.076 Sum_probs=155.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++. ...++||||++ |+|.+++.....+++..+..++.|++.||+|||++||+||||||.||+++.+
T Consensus 53 l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~ 131 (257)
T cd05116 53 LDNPYIVRMIGICEA-ESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQ 131 (257)
T ss_pred CCCCCcceEEEEEcC-CCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCC
Confidence 579999999998864 56799999999 6999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVP 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~ 158 (1472)
+.++|+|||.++....... .........++..|+|||.+. ...++.++|||||||++|||++ |.+
T Consensus 132 ~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~t~g~~ 197 (257)
T cd05116 132 HYAKISDFGLSKALGADEN----YYKAKTHGKWPVKWYAPECMN----------YYKFSSKSDVWSFGVLMWEAFSYGQK 197 (257)
T ss_pred CeEEECCCccccccCCCCC----eeeecCCCCCCccccCHhHhc----------cCCcCchhHHHHHHHHHHHHHhCCCC
Confidence 9999999999876532211 000111223356799999764 2357789999999999999998 898
Q ss_pred CCCchHH---HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 159 FFELSHL---LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 159 pf~~~~~---~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
||..... ....... .....+...+++++++|.+||+.||++||+++++.+.++
T Consensus 198 p~~~~~~~~~~~~i~~~--~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~ 253 (257)
T cd05116 198 PYKGMKGNEVTQMIESG--ERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLR 253 (257)
T ss_pred CCCCCCHHHHHHHHHCC--CCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHh
Confidence 9864322 2222211 122345566789999999999999999999999998864
No 182
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.94 E-value=6.1e-27 Score=272.85 Aligned_cols=195 Identities=25% Similarity=0.335 Sum_probs=153.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.++...|+|+||++++|.+++.. ++.+++..++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 56 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~ 135 (284)
T cd07839 56 LKHKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKN 135 (284)
T ss_pred cCCCCeeeHHHHhccCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCC
Confidence 579999999999999999999999999999998864 5669999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC-C
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV-P 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~-~ 158 (1472)
+.++|+|||.++....+.. .+....++..|+|||.+.+ ...++.++||||+||++|||++|. |
T Consensus 136 ~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~~l~tg~~p 199 (284)
T cd07839 136 GELKLADFGLARAFGIPVR-------CYSAEVVTLWYRPPDVLFG---------AKLYSTSIDMWSAGCIFAELANAGRP 199 (284)
T ss_pred CcEEECccchhhccCCCCC-------CcCCCccccCCcChHHHhC---------CcccCcHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999875532211 1123346788999998742 234688999999999999999985 4
Q ss_pred CCCchHHHHH----Hhc----------------CCCCCc---------ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 159 FFELSHLLAY----RRG----------------QYDPSQ---------HLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 159 pf~~~~~~~~----~~~----------------~~~~~~---------~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
+|......+. .+. .+.... ......++.+++||.+||+.||.+|||++|++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il 279 (284)
T cd07839 200 LFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEAL 279 (284)
T ss_pred CcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHh
Confidence 4543322111 000 000000 01123467899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 280 ~h 281 (284)
T cd07839 280 QH 281 (284)
T ss_pred cC
Confidence 98
No 183
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.94 E-value=1.6e-26 Score=270.67 Aligned_cols=198 Identities=15% Similarity=0.151 Sum_probs=156.2
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----------------PPFLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~----------------~~~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
+||||+++++++..+...|++|||+. |+|.+++.. ...+++.++..++.|++.||+|||++||
T Consensus 74 ~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i 153 (293)
T cd05053 74 KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKC 153 (293)
T ss_pred CCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 79999999999999999999999998 699999853 2358899999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+||+++.++.++|+|||.++...... .........++..|+|||.+. +..++.++|||
T Consensus 154 vH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~ 218 (293)
T cd05053 154 IHRDLAARNVLVTEDHVMKIADFGLARDIHHID-----YYRKTTNGRLPVKWMAPEALF----------DRVYTHQSDVW 218 (293)
T ss_pred cccccceeeEEEcCCCeEEeCcccccccccccc-----ceeccCCCCCCccccCHHHhc----------cCCcCccccee
Confidence 999999999999999999999999987653211 111111223456799999764 34578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||||++|||++ |..||........... ........+...+..+.+|+.+||..||++|||+.|+++++..
T Consensus 219 slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~ 290 (293)
T cd05053 219 SFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290 (293)
T ss_pred ehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence 99999999997 7888865433222211 1111122334456789999999999999999999999998654
No 184
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.5e-27 Score=271.04 Aligned_cols=204 Identities=20% Similarity=0.165 Sum_probs=172.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+..|.||++|..|.+++.+|+.||-|- |.|+..++.++.+++..+++++..+++|++|||++|||.|||||||++++.+
T Consensus 477 ~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~ 556 (732)
T KOG0614|consen 477 CRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNR 556 (732)
T ss_pred cCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccC
Confidence 457899999999999999999999998 6999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|++||.|||++|.+..... ..|.|||+.|.|||++.+. ..+.++|.||||+++|||++|.||
T Consensus 557 Gy~KLVDFGFAKki~~g~K--------TwTFcGTpEYVAPEIILnK----------GHD~avDyWaLGIli~ELL~G~pP 618 (732)
T KOG0614|consen 557 GYLKLVDFGFAKKIGSGRK--------TWTFCGTPEYVAPEIILNK----------GHDRAVDYWALGILIYELLTGSPP 618 (732)
T ss_pred CceEEeehhhHHHhccCCc--------eeeecCCcccccchhhhcc----------CcchhhHHHHHHHHHHHHHcCCCC
Confidence 9999999999998743322 3578999999999998854 346789999999999999999999
Q ss_pred CCchHHHHHHhcCCC--CCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHHhhcccCCCCCChhhhhhh
Q 000470 160 FELSHLLAYRRGQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQNYAAVVFPTYFSPFLHNFY 229 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~--~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~~~~~~fp~~f~~~l~~~~ 229 (1472)
|...+..+....... ....+|........+||+++...+|.+|.. +.++-+| .||..|-..-+
T Consensus 619 Fs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH-------~Wf~gfdwegl 688 (732)
T KOG0614|consen 619 FSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH-------RWFEGFDWEGL 688 (732)
T ss_pred CCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh-------hhhhcCChhhh
Confidence 987665443322222 223466777788999999999999999985 7888888 45555444433
No 185
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.94 E-value=1.8e-26 Score=275.26 Aligned_cols=200 Identities=17% Similarity=0.194 Sum_probs=155.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++++++++...|+||||+. |+|.+++.. ...+++.+++.++.||+.||+|||++||+||||||+|||++.
T Consensus 58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~ 137 (331)
T cd05597 58 GDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK 137 (331)
T ss_pred CCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC
Confidence 479999999999999999999999998 699999976 456999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.+||+|||++........ .......|++.|+|||++..... ....++.++||||+||++|||++|+.
T Consensus 138 ~~~~kl~Dfg~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~-----~~~~~~~~~DiwslG~~l~el~~g~~ 206 (331)
T cd05597 138 NGHIRLADFGSCLRLLADGT------VQSNVAVGTPDYISPEILQAMED-----GKGRYGPECDWWSLGVCMYEMLYGET 206 (331)
T ss_pred CCCEEEEECCceeecCCCCC------ccccceeccccccCHHHHhhccc-----cccCCCCcceeehhhhHHHHHhhCCC
Confidence 99999999998865422111 01122357889999998853211 12457889999999999999999998
Q ss_pred CCCchHHHHH----HhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHH
Q 000470 159 FFELSHLLAY----RRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~~----~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 211 (1472)
||........ ...... ..+......++.+++||.+||..++++ |++++++++|
T Consensus 207 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 207 PFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 9865443221 111111 111112235678999999999764443 7899999999
No 186
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.94 E-value=3.1e-26 Score=264.69 Aligned_cols=188 Identities=24% Similarity=0.284 Sum_probs=156.8
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||+++++.+..+...|+||||++ ++|.+++..+..+++.+++.++.|++.||.|||+.|++||||||+||+++.++
T Consensus 67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~ 146 (267)
T PHA03390 67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK 146 (267)
T ss_pred cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC
Confidence 69999999999999999999999998 69999998877899999999999999999999999999999999999999998
Q ss_pred -cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 81 -WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 81 -~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
.++|+|||.++..... ....++..|+|||.+. +..++.++||||+||++|||++|..|
T Consensus 147 ~~~~l~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~il~~l~~g~~p 205 (267)
T PHA03390 147 DRIYLCDYGLCKIIGTP-----------SCYDGTLDYFSPEKIK----------GHNYDVSFDWWAVGVLTYELLTGKHP 205 (267)
T ss_pred CeEEEecCccceecCCC-----------ccCCCCCcccChhhhc----------CCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 9999999987654211 1224678899999774 33567899999999999999999989
Q ss_pred CCchH-----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-HHHHHHH
Q 000470 160 FELSH-----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-AESYLQN 211 (1472)
Q Consensus 160 f~~~~-----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-a~elL~~ 211 (1472)
|.... ...+.... .......+..++.+++||.+||+.||.+|++ ++|+|+|
T Consensus 206 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 206 FKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred CCCCCcchhhHHHHHHhh-cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 86332 12222222 2222344467789999999999999999996 6999998
No 187
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=7.3e-25 Score=231.82 Aligned_cols=296 Identities=13% Similarity=0.203 Sum_probs=224.6
Q ss_pred eeeeccccccceeEEEEcCC-CCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCC
Q 000470 1050 LVAHLQEHCSAVNEIAISHD-HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1128 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd-~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG 1128 (1472)
++..+++|++.|..++|+|. |..|||||.|..|+||+...+. ..+.+.. .-.+|...|.+++|+|.|++||+||.|.
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~-s~~ck~v-ld~~hkrsVRsvAwsp~g~~La~aSFD~ 83 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGD-SWTCKTV-LDDGHKRSVRSVAWSPHGRYLASASFDA 83 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCC-cEEEEEe-ccccchheeeeeeecCCCcEEEEeeccc
Confidence 56889999999999999998 8899999999999999987522 2222221 1235778899999999999999999999
Q ss_pred cEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC---ccceeec
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS---NTWTLKA 1205 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~---~~~~l~~ 1205 (1472)
++-||.-.. ... .+......|...|.+++|+++ |++|++++.|..|.+|.+..+. +...|+.
T Consensus 84 t~~Iw~k~~-----------~ef-ecv~~lEGHEnEVK~Vaws~s---G~~LATCSRDKSVWiWe~deddEfec~aVL~~ 148 (312)
T KOG0645|consen 84 TVVIWKKED-----------GEF-ECVATLEGHENEVKCVAWSAS---GNYLATCSRDKSVWIWEIDEDDEFECIAVLQE 148 (312)
T ss_pred eEEEeecCC-----------Cce-eEEeeeeccccceeEEEEcCC---CCEEEEeeCCCeEEEEEecCCCcEEEEeeecc
Confidence 999996541 111 122233456778999999998 8899999999999999998543 4455655
Q ss_pred CCCccceEEEEEcCCCCEEEEEeCCCcEEEEECC---CCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEc
Q 000470 1206 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLR---FLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG 1282 (1472)
Q Consensus 1206 ~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr---~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~ 1282 (1472)
|...|.-+.|+|....|++++.|.+|++|+-. ...++.++.. +...+.++.| +|.+. .+++++.
T Consensus 149 --HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g-~~~TVW~~~F-~~~G~---------rl~s~sd 215 (312)
T KOG0645|consen 149 --HTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDG-HENTVWSLAF-DNIGS---------RLVSCSD 215 (312)
T ss_pred --ccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecC-ccceEEEEEe-cCCCc---------eEEEecC
Confidence 88899999999999999999999999999865 2345566554 4457888888 66554 7899999
Q ss_pred CCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCC
Q 000470 1283 CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG 1362 (1472)
Q Consensus 1283 dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~ 1362 (1472)
|+.|+||-..+. +. .-|...++.+.|. +
T Consensus 216 D~tv~Iw~~~~~-----~~----------------------------------------------~~~sr~~Y~v~W~-~ 243 (312)
T KOG0645|consen 216 DGTVSIWRLYTD-----LS----------------------------------------------GMHSRALYDVPWD-N 243 (312)
T ss_pred CcceEeeeeccC-----cc----------------------------------------------hhcccceEeeeec-c
Confidence 999999986521 00 1122368888997 8
Q ss_pred CcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCC
Q 000470 1363 GDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCH 1442 (1472)
Q Consensus 1363 g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H 1442 (1472)
|.|+|||.|+.||++--.. ++. .+.|. + .......|
T Consensus 244 ~~IaS~ggD~~i~lf~~s~--------~~d------~p~~~------l------------------------~~~~~~aH 279 (312)
T KOG0645|consen 244 GVIASGGGDDAIRLFKESD--------SPD------EPSWN------L------------------------LAKKEGAH 279 (312)
T ss_pred cceEeccCCCEEEEEEecC--------CCC------CchHH------H------------------------HHhhhccc
Confidence 8999999999999997431 110 11110 0 00112359
Q ss_pred ccceeEEeeeecC-CcEEEEEcCCceEEEcC
Q 000470 1443 RDSILSLGSVKLN-QRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1443 ~d~I~~va~~~~~-~~~LvS~s~DG~IkVWk 1472 (1472)
...|++|+ |++. ...|+|||+||+|++|+
T Consensus 280 e~dVNsV~-w~p~~~~~L~s~~DDG~v~~W~ 309 (312)
T KOG0645|consen 280 EVDVNSVQ-WNPKVSNRLASGGDDGIVNFWE 309 (312)
T ss_pred ccccceEE-EcCCCCCceeecCCCceEEEEE
Confidence 99999996 8885 78899999999999995
No 188
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.94 E-value=1.9e-26 Score=265.35 Aligned_cols=193 Identities=21% Similarity=0.240 Sum_probs=158.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+++||++ ++|.+++.....+++..++.++.||+.||+|||++|++|+||||+||+++.+
T Consensus 50 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~ 129 (262)
T cd05572 50 CNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSN 129 (262)
T ss_pred CCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCC
Confidence 589999999999999999999999998 6999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++....... .....++..|+|||.+. ...++.++|+||+||++|+|++|.+|
T Consensus 130 ~~~~l~df~~~~~~~~~~~--------~~~~~~~~~~~~PE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p 191 (262)
T cd05572 130 GYVKLVDFGFAKKLKSGQK--------TWTFCGTPEYVAPEIIL----------NKGYDFSVDYWSLGILLYELLTGRPP 191 (262)
T ss_pred CCEEEeeCCcccccCcccc--------cccccCCcCccChhHhc----------CCCCCChhhhhhhHHHHHHHHhCCCC
Confidence 9999999999876532210 11234577899999764 23567899999999999999999989
Q ss_pred CCchH--HHH-HHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 160 FELSH--LLA-YRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 160 f~~~~--~~~-~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
|.... ... +..... ......+...++.++++|.+||+.||++||+ ++|+++|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 192 FGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred cCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence 86544 222 222111 1122334444788999999999999999999 9999998
No 189
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.94 E-value=3.2e-26 Score=267.61 Aligned_cols=204 Identities=14% Similarity=0.108 Sum_probs=158.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DL 69 (1472)
++||||+++++++......|+||||++ |+|.+++... +.++...+..++.||+.||.|||++||+||||
T Consensus 66 l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~di 145 (288)
T cd05061 66 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 145 (288)
T ss_pred CCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCC
Confidence 579999999999999999999999999 7999999642 33567788999999999999999999999999
Q ss_pred CCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
||+||+++.++.++|+|||+++....... ........++..|+|||.+. ...++.++||||+||+
T Consensus 146 kp~nili~~~~~~~L~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~pE~~~----------~~~~~~~~DvwslG~~ 210 (288)
T cd05061 146 AARNCMVAHDFTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLK----------DGVFTTSSDMWSFGVV 210 (288)
T ss_pred ChheEEEcCCCcEEECcCCcccccccccc-----ccccCCCcccccccCHHHhc----------cCCCChHhHHHHHHHH
Confidence 99999999999999999998875432111 00111223456799999764 3357889999999999
Q ss_pred HHHHHh-CCCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcccCCC
Q 000470 150 IAELFL-EVPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPT 219 (1472)
Q Consensus 150 l~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fp~ 219 (1472)
+|||++ |.+||.......+..... ......+...++.+++++.+||+.||++||++.++++.++....|.
T Consensus 211 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~ 282 (288)
T cd05061 211 LWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPS 282 (288)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCC
Confidence 999998 588886544333322111 1112233445678999999999999999999999999877665553
No 190
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.94 E-value=2.8e-26 Score=271.86 Aligned_cols=198 Identities=13% Similarity=0.102 Sum_probs=157.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+ ..++++||+. |+|.+++... ..++...+..++.||+.||+|||++||+||||||+|||++.
T Consensus 66 l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~ 144 (316)
T cd05108 66 VDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKT 144 (316)
T ss_pred CCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecC
Confidence 5799999999998765 5678999999 7999999874 45889999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.+||+|||+++....... .........+..|+|||.+. ...++.++|||||||++|||++ |.
T Consensus 145 ~~~~kl~DfG~a~~~~~~~~-----~~~~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slGv~l~el~t~g~ 209 (316)
T cd05108 145 PQHVKITDFGLAKLLGADEK-----EYHAEGGKVPIKWMALESIL----------HRIYTHQSDVWSYGVTVWELMTFGS 209 (316)
T ss_pred CCcEEEccccccccccCCCc-----ceeccCCccceeecChHHhc----------cCCCCchhhhHHHHHHHHHHHcCCC
Confidence 99999999999886532211 11112233466799999764 3467889999999999999997 89
Q ss_pred CCCCchHHHH---HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhccc
Q 000470 158 PFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVV 216 (1472)
Q Consensus 158 ~pf~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~ 216 (1472)
+||....... ...... ....+...+..+.+++.+||+.||++||++.+++.++....
T Consensus 210 ~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 210 KPYDGIPASEISSILEKGE--RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred CCCCCCCHHHHHHHHhCCC--CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 9997543322 222221 11233456678999999999999999999999999866543
No 191
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.94 E-value=1.9e-26 Score=275.26 Aligned_cols=200 Identities=17% Similarity=0.201 Sum_probs=156.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++++++++...|+||||++ |+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 58 ~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~ 137 (332)
T cd05623 58 GDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM 137 (332)
T ss_pred CCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC
Confidence 479999999999999999999999998 799999976 456899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||+++...... ........|++.|+|||++.... .....++.++|||||||++|||++|++
T Consensus 138 ~~~~kL~DfG~a~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~DvwSlGvil~ell~g~~ 206 (332)
T cd05623 138 NGHIRLADFGSCLKLMEDG------TVQSSVAVGTPDYISPEILQAME-----DGKGKYGPECDWWSLGVCMYEMLYGET 206 (332)
T ss_pred CCCEEEeecchheecccCC------cceecccccCccccCHHHHhccc-----cCCCCCCCcCCEEeeHHHHHHHhcCCC
Confidence 9999999999886542111 11123346899999999875321 123467889999999999999999999
Q ss_pred CCCchHHHH-HHh---cCCC-CCcccCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHH
Q 000470 159 FFELSHLLA-YRR---GQYD-PSQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~-~~~---~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 211 (1472)
||....... +.+ .... ..+......++.+++||.+||..++++ |++++|+++|
T Consensus 207 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 207 PFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 986544322 221 1111 111112345788999999999765554 6899999998
No 192
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.94 E-value=3.2e-26 Score=266.03 Aligned_cols=198 Identities=16% Similarity=0.114 Sum_probs=154.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-------~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpe 72 (1472)
++||||+++++++.+....|+||||++ ++|.+++.... .+++..+..++.||+.||+|||++|++||||||+
T Consensus 66 l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~ 145 (277)
T cd05036 66 FNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAAR 145 (277)
T ss_pred CCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchh
Confidence 579999999999999889999999998 69999986532 4889999999999999999999999999999999
Q ss_pred CEEEccCC---cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 73 NVLVTSWN---WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 73 NILv~~~~---~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
||+++..+ .+||+|||+++....... .........+..|+|||.+. +..++.++|||||||+
T Consensus 146 nil~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslG~i 210 (277)
T cd05036 146 NCLLTCKGPGRVAKIADFGMARDIYRASY-----YRKGGRAMLPIKWMPPEAFL----------DGIFTSKTDVWSFGVL 210 (277)
T ss_pred eEEEeccCCCcceEeccCccccccCCccc-----eecCCCCCccHhhCCHHHHh----------cCCcCchhHHHHHHHH
Confidence 99998765 599999999876521110 00011112245799999874 3457899999999999
Q ss_pred HHHHHh-CCCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 150 IAELFL-EVPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 150 l~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+|||++ |..||............. ......+...+..+.+++.+||+.+|++||++.++++|+.
T Consensus 211 l~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 211 LWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 999997 899997544333221111 1122234455678999999999999999999999999863
No 193
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.94 E-value=5.4e-26 Score=264.75 Aligned_cols=198 Identities=17% Similarity=0.154 Sum_probs=157.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+|+||++ ++|.+++.. ...+++.++..++.|++.||.|||+.||+||||||+||+++.
T Consensus 59 l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~ 138 (282)
T cd06643 59 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTL 138 (282)
T ss_pred CCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcc
Confidence 579999999999999999999999999 588887754 456899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||++....... .......++..|+|||.+.... .....++.++||||+||++|||++|.+
T Consensus 139 ~~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slGvil~el~~g~~ 206 (282)
T cd06643 139 DGDIKLADFGVSAKNTRTI-------QRRDSFIGTPYWMAPEVVMCET-----SKDRPYDYKADVWSLGITLIEMAQIEP 206 (282)
T ss_pred CCCEEEccccccccccccc-------cccccccccccccCHhhccccC-----CCCCCCCccchhhhHHHHHHHHccCCC
Confidence 9999999999876432111 1112345678899999875221 124467889999999999999999999
Q ss_pred CCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||....... ...... +....+...+..+++||.+||+.||.+||+++++++|
T Consensus 207 p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 207 PHHELNPMRVLLKIAKSEP-PTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred CccccCHHHHHHHHhhcCC-CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 986433221 212211 1222344456789999999999999999999999988
No 194
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=3.7e-27 Score=256.62 Aligned_cols=197 Identities=24% Similarity=0.360 Sum_probs=155.6
Q ss_pred CCCCCcceeeEEEEeC------CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~------~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++|+||++++.+|.-. ..+|+|||||..+|.+.+.. .++...++.|++|+++|++|||+.||+||||||+||
T Consensus 72 v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~~--elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsni 149 (369)
T KOG0665|consen 72 VNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVILM--ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNI 149 (369)
T ss_pred hcccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHHH--hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccc
Confidence 5899999999999544 36899999999999999884 378899999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
++..++.+||.|||+++.... .+.......+..|.|||++.+ ..|.+.+||||+||+++||+
T Consensus 150 vv~~~~~lKi~dfg~ar~e~~--------~~~mtpyVvtRyyrapevil~----------~~~ke~vdiwSvGci~gEli 211 (369)
T KOG0665|consen 150 VVNSDCTLKILDFGLARTEDT--------DFMMTPYVVTRYYRAPEVILG----------MGYKENVDIWSVGCIMGELI 211 (369)
T ss_pred eecchhheeeccchhhcccCc--------ccccCchhheeeccCchheec----------cCCcccchhhhhhhHHHHHh
Confidence 999999999999999875421 133345566888999998873 34788999999999999999
Q ss_pred hCCCCCCchHHH----------------------H----HHhc--C---CC-----CCc------ccCCCCCHHHHHHHH
Q 000470 155 LEVPFFELSHLL----------------------A----YRRG--Q---YD-----PSQ------HLEKIPDSGIRKMIL 192 (1472)
Q Consensus 155 tg~~pf~~~~~~----------------------~----~~~~--~---~~-----~~~------~l~~~~~~~l~~LI~ 192 (1472)
+|+..|.+.... . |.+. . .. +.. +-++.....+++|+.
T Consensus 212 ~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~ 291 (369)
T KOG0665|consen 212 LGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLS 291 (369)
T ss_pred hceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHH
Confidence 999888643210 0 0000 0 00 000 111233456899999
Q ss_pred HhcccCcCCCCCHHHHHHHhhcccCCCCCChh
Q 000470 193 HMIQLEPELRFSAESYLQNYAAVVFPTYFSPF 224 (1472)
Q Consensus 193 ~mL~~dP~~Rpsa~elL~~~~~~~fp~~f~~~ 224 (1472)
+||..||++|.+++++|+| +|+.-|
T Consensus 292 ~MLvi~pe~Risv~daL~H-------PY~~vw 316 (369)
T KOG0665|consen 292 KMLVIDPEKRISVDDALRH-------PYIKVW 316 (369)
T ss_pred HhhccChhhcccHHHHhcC-------Ceeeee
Confidence 9999999999999999999 666543
No 195
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.94 E-value=4.7e-26 Score=261.40 Aligned_cols=197 Identities=17% Similarity=0.120 Sum_probs=155.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++. ...|+||||+. |+|.+++...+.+++.++..++.|++.||+|||++|++||||||+|||++.+
T Consensus 53 l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~ 131 (257)
T cd05060 53 LDHPCIVRLIGVCKG-EPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNR 131 (257)
T ss_pred cCCCCeeeEEEEEcC-CceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCC
Confidence 579999999998764 46899999998 6999999888789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVP 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~ 158 (1472)
+.++|+|||.++....... .........++..|+|||.+. ...++.++|||||||++|||++ |.+
T Consensus 132 ~~~kl~df~~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~~~~~~g~~ 197 (257)
T cd05060 132 HQAKISDFGMSRALGAGSD----YYRATTAGRWPLKWYAPECIN----------YGKFSSKSDVWSYGVTLWEAFSYGAK 197 (257)
T ss_pred CcEEeccccccceeecCCc----ccccccCccccccccCHHHhc----------CCCCCccchHHHHHHHHHHHHcCCCC
Confidence 9999999999876532111 000011122345799999764 3357889999999999999998 899
Q ss_pred CCCchHHH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 159 FFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 159 pf~~~~~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||...... ....... ....+...+..++++|.+||..||++||++.++++.++.
T Consensus 198 p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 198 PYGEMKGAEVIAMLESGE--RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred CcccCCHHHHHHHHHcCC--cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 98643322 2222211 112334556789999999999999999999999988654
No 196
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.94 E-value=3.6e-26 Score=262.66 Aligned_cols=191 Identities=19% Similarity=0.188 Sum_probs=152.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
+.||||+++++++..+...|+||||++ |+|.+++..+ ..+++..++.++.||+.||+|||++||+||||||+||+++.
T Consensus 56 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~ 135 (258)
T cd05078 56 LSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIR 135 (258)
T ss_pred CCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEec
Confidence 579999999999999999999999999 6999999764 45899999999999999999999999999999999999987
Q ss_pred CCc--------EEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 79 WNW--------LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 79 ~~~--------vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
++. ++++|||.+..... .....++..|+|||.+.. ...++.++|||||||++
T Consensus 136 ~~~~~~~~~~~~~l~d~g~~~~~~~-----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~~l 195 (258)
T cd05078 136 EEDRKTGNPPFIKLSDPGISITVLP-----------KEILLERIPWVPPECIEN---------PQNLSLAADKWSFGTTL 195 (258)
T ss_pred ccccccCCCceEEecccccccccCC-----------chhccccCCccCchhccC---------CCCCCchhhHHHHHHHH
Confidence 764 69999998754321 122346778999997742 23468899999999999
Q ss_pred HHHHhC-CCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 151 AELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 151 ~eLltg-~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
|||++| .+||........... ......++...+.++.+||.+||+.||++|||++++++.+
T Consensus 196 ~~l~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 196 WEIFSGGDKPLSALDSQKKLQF-YEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHHHcCCCCChhhccHHHHHHH-HHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 999999 677754433221110 1111224444557899999999999999999999999874
No 197
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.94 E-value=6.3e-27 Score=273.35 Aligned_cols=199 Identities=17% Similarity=0.143 Sum_probs=162.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
.|.||+-|.+++..+.. .||+++|+| +||.+|+-. ..|.....+.|+.||++|+.|||.++|||||||..||++.++
T Consensus 446 RH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~ 524 (678)
T KOG0193|consen 446 RHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHED 524 (678)
T ss_pred chhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccC
Confidence 59999999999988877 899999997 999999863 458999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.|||+|||++.....- . -...+....|..+|||||++.. ....+|++.+||||||||+|||++|..|
T Consensus 525 ~kVkIgDFGLatvk~~w-~----g~~q~~qp~gsilwmAPEvIRm-------qd~nPfS~qSDVYaFGiV~YELltg~lP 592 (678)
T KOG0193|consen 525 LKVKIGDFGLATVKTRW-S----GEQQLEQPHGSLLWMAPEVIRM-------QDDNPFSFQSDVYAFGIVWYELLTGELP 592 (678)
T ss_pred CcEEEecccceeeeeee-c----cccccCCCccchhhhcHHHHhh-------cccCCCCcccchhhhhHHHHHHHhCcCC
Confidence 99999999997543211 1 1112355668899999999973 2367999999999999999999999999
Q ss_pred CCchHHHHH----HhcCCCCCc-ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 160 FELSHLLAY----RRGQYDPSQ-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 160 f~~~~~~~~----~~~~~~~~~-~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|.......+ -++...+.. .......+++++|+..||.+++++||.+.++|..++
T Consensus 593 ysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~ 651 (678)
T KOG0193|consen 593 YSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE 651 (678)
T ss_pred cCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence 985443332 233222322 223345569999999999999999999999998754
No 198
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.94 E-value=2.4e-26 Score=270.78 Aligned_cols=195 Identities=15% Similarity=0.068 Sum_probs=153.6
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
+||||++++++++.++..|+||||++ |+|.+++... +.+++.+++.++.||+.||+|||++||
T Consensus 66 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi 145 (303)
T cd05088 66 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF 145 (303)
T ss_pred CCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 79999999999999999999999998 6999999643 257899999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||++.++.++|+|||+++....... ......+..|+|||.+. ...++.++|||
T Consensus 146 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~ 207 (303)
T cd05088 146 IHRDLAARNILVGENYVAKIADFGLSRGQEVYVK--------KTMGRLPVRWMAIESLN----------YSVYTTNSDVW 207 (303)
T ss_pred cccccchheEEecCCCcEEeCccccCcccchhhh--------cccCCCcccccCHHHHh----------ccCCcccccch
Confidence 9999999999999999999999998763211000 01112245699999764 33578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHHHHH-hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||||++|||++ |.+||......... ..........+...++.+.+||.+||+.+|++||+++++++++..
T Consensus 208 slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~ 279 (303)
T cd05088 208 SYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 279 (303)
T ss_pred hhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 99999999998 88888644332222 111111222333456789999999999999999999999998643
No 199
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.94 E-value=3.6e-26 Score=265.24 Aligned_cols=195 Identities=14% Similarity=0.105 Sum_probs=155.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DL 69 (1472)
++||||+++++++..+...|+||||++ |+|.+++... ..+++..+..++.|++.||.|||+.||+||||
T Consensus 66 ~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di 145 (277)
T cd05032 66 FNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDL 145 (277)
T ss_pred CCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence 579999999999999999999999998 7999998642 23678899999999999999999999999999
Q ss_pred CCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
||+||+++.++.+||+|||.++....... ........++..|+|||.+. ...++.++|||||||+
T Consensus 146 ~p~nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~i 210 (277)
T cd05032 146 AARNCMVAEDLTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLK----------DGVFTTKSDVWSFGVV 210 (277)
T ss_pred ChheEEEcCCCCEEECCcccchhhccCcc-----cccCCCCCccccccCHHHHh----------cCCCCcccchHHHHHH
Confidence 99999999999999999999875532111 01112334567899999764 3357889999999999
Q ss_pred HHHHHh-CCCCCCchHHH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 150 IAELFL-EVPFFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 150 l~eLlt-g~~pf~~~~~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+|||++ |.+||...... ++.... .....+...+..+.++|.+||+.+|++|||+.++++.+
T Consensus 211 l~el~t~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l 275 (277)
T cd05032 211 LWEMATLAEQPYQGLSNEEVLKFVIDG--GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSL 275 (277)
T ss_pred HHHhhccCCCCCccCCHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHh
Confidence 999998 88898644322 222211 12223444578899999999999999999999999875
No 200
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.94 E-value=1.2e-26 Score=278.51 Aligned_cols=191 Identities=23% Similarity=0.257 Sum_probs=150.5
Q ss_pred CCCCCcceeeEEEEeC------CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~------~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++... ...|++++++.++|.+++..+ .+++.+++.++.||+.||.|||++||+||||||+||
T Consensus 71 l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Ni 149 (343)
T cd07878 71 MKHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKCQ-KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNV 149 (343)
T ss_pred cCCCchhhhhhhhcccccccccCcEEEEeecCCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhE
Confidence 5899999999988643 357999999999999888654 589999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
|++.++.+||+|||+++..... .....+++.|+|||.+.. ...++.++|||||||++|+|+
T Consensus 150 l~~~~~~~kl~Dfg~~~~~~~~----------~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwslG~il~el~ 210 (343)
T cd07878 150 AVNEDCELRILDFGLARQADDE----------MTGYVATRWYRAPEIMLN---------WMHYNQTVDIWSVGCIMAELL 210 (343)
T ss_pred EECCCCCEEEcCCccceecCCC----------cCCccccccccCchHhcC---------CccCCchhhhHhHHHHHHHHH
Confidence 9999999999999998754211 123357889999998752 235788999999999999999
Q ss_pred hCCCCCCchHHH----HHHhcCCC------------------------CCc---ccCCCCCHHHHHHHHHhcccCcCCCC
Q 000470 155 LEVPFFELSHLL----AYRRGQYD------------------------PSQ---HLEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 155 tg~~pf~~~~~~----~~~~~~~~------------------------~~~---~l~~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
+|++||...... .+...... +.. ......++.+.+||.+||+.||++||
T Consensus 211 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~ 290 (343)
T cd07878 211 KGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRI 290 (343)
T ss_pred HCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCC
Confidence 999999643221 11110000 000 00112345689999999999999999
Q ss_pred CHHHHHHH
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~elL~~ 211 (1472)
|+.|+++|
T Consensus 291 s~~ell~h 298 (343)
T cd07878 291 SASEALAH 298 (343)
T ss_pred CHHHHhcC
Confidence 99999998
No 201
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.94 E-value=4.2e-26 Score=262.97 Aligned_cols=200 Identities=18% Similarity=0.135 Sum_probs=160.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.++...|+++||++ ++|.+++.....+++..+..++.|++.||+|||+.||+|+||||+||+++++
T Consensus 59 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~ 138 (265)
T cd06631 59 LKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPN 138 (265)
T ss_pred cCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCC
Confidence 579999999999999999999999998 5999999887778999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++........ ...........++..|+|||.+. +..++.++|+||+||++|+|++|.+|
T Consensus 139 ~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~slG~~~~~l~~g~~p 207 (265)
T cd06631 139 GIIKLIDFGCARRLAWVGLH-GTHSNMLKSMHGTPYWMAPEVIN----------ESGYGRKSDIWSIGCTVFEMATGKPP 207 (265)
T ss_pred CeEEeccchhhHhhhhcccc-ccccccccccCCCccccChhhhc----------CCCCcchhhHHHHHHHHHHHHhCCCc
Confidence 99999999988754221111 01111223345788899999764 33567899999999999999999988
Q ss_pred CCchHHH-HHHh-cCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLL-AYRR-GQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~-~~~~-~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...+.. .... ... ...+.++...+..+.++|.+||+.+|++||++.|+++|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 208 LASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred cccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 8643322 1111 111 12233555667889999999999999999999999988
No 202
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.94 E-value=5.9e-26 Score=260.40 Aligned_cols=196 Identities=16% Similarity=0.099 Sum_probs=155.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++++++.+...|+||||++ |+|.+++.. .+.+++..++.++.|++.||+|||++||+||||||+||+++.
T Consensus 56 l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~ 135 (256)
T cd05114 56 LSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSS 135 (256)
T ss_pred CCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcC
Confidence 579999999999999999999999998 699999975 356899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.++........ ......++..|+|||.+. ...++.++||||+||++|||++ |+
T Consensus 136 ~~~~kl~d~g~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~s~G~~l~el~~~g~ 199 (256)
T cd05114 136 TGVVKVSDFGMTRYVLDDEYT------SSSGAKFPVKWSPPEVFN----------FSKYSSKSDVWSFGVLMWEVFTEGK 199 (256)
T ss_pred CCeEEECCCCCccccCCCcee------ccCCCCCchhhCChhhcc----------cCccchhhhhHHHHHHHHHHHcCCC
Confidence 999999999987654211100 001122345799999764 2357889999999999999999 79
Q ss_pred CCCCchHHHHHH-hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 158 PFFELSHLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 158 ~pf~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+||......... ..........+...+..+.+++.+||+.||++||+++++++.+
T Consensus 200 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 200 MPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 999654332221 1111111223445667899999999999999999999999763
No 203
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.94 E-value=3.4e-26 Score=262.15 Aligned_cols=191 Identities=25% Similarity=0.313 Sum_probs=156.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++.++++...|++|||++ ++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||+++
T Consensus 55 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~ 134 (255)
T cd08219 55 MKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT 134 (255)
T ss_pred CCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC
Confidence 589999999999999999999999998 699998864 23589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+++.++|+|||.+.....+.. ......+++.|+|||.+. ...++.++|+||+||++|+|++|.
T Consensus 135 ~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~~~aPE~~~----------~~~~~~~~Dv~slG~i~~~l~~g~ 197 (255)
T cd08219 135 QNGKVKLGDFGSARLLTSPGA-------YACTYVGTPYYVPPEIWE----------NMPYNNKSDIWSLGCILYELCTLK 197 (255)
T ss_pred CCCcEEEcccCcceeeccccc-------ccccccCCccccCHHHHc----------cCCcCchhhhhhhchhheehhhcc
Confidence 999999999998765422111 112345678899999764 335788999999999999999999
Q ss_pred CCCCchHHHHH----HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||........ ..+... .++...+..+++||.+||+.||++||++.+++..
T Consensus 198 ~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 198 HPFQANSWKNLILKVCQGSYK---PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCCCHHHHHHHHhcCCCC---CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 89875543322 222222 2344566789999999999999999999999975
No 204
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.94 E-value=4.3e-26 Score=261.58 Aligned_cols=193 Identities=18% Similarity=0.147 Sum_probs=154.4
Q ss_pred CCCCCcceeeEEE-EeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQ-ETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~-~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||+++++++ ..+...|++|||++ ++|.+++..++ .+++..+..++.|++.||+|||++||+||||||+||++
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~ 135 (256)
T cd05082 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV 135 (256)
T ss_pred CCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE
Confidence 5799999999875 45668999999999 69999997643 48899999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL- 155 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt- 155 (1472)
+.++.+||+|||+++...... ....++..|+|||.+. ...++.++|||||||++|||++
T Consensus 136 ~~~~~~kl~dfg~~~~~~~~~----------~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~i~~~l~~~ 195 (256)
T cd05082 136 SEDNVAKVSDFGLTKEASSTQ----------DTGKLPVKWTAPEALR----------EKKFSTKSDVWSFGILLWEIYSF 195 (256)
T ss_pred cCCCcEEecCCccceeccccC----------CCCccceeecCHHHHc----------cCCCCchhhhHHHHHHHHHHHhC
Confidence 999999999999887542211 1223355799999764 3357889999999999999997
Q ss_pred CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 156 EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 156 g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|++||............ .......+...++.+++++.+||+.+|++||++.++++.+.
T Consensus 196 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 254 (256)
T cd05082 196 GRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLE 254 (256)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHh
Confidence 88888654443322111 11122344556788999999999999999999999998864
No 205
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.94 E-value=5.3e-26 Score=260.66 Aligned_cols=194 Identities=22% Similarity=0.249 Sum_probs=155.7
Q ss_pred CCCCCcceeeEEEEe-CCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQET-DKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~-~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||+++++.+.. +...|++|||++ ++|.+++.. ...+++.+++.++.|++.||.+||++||+||||||+||++
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~ 135 (257)
T cd08223 56 LKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL 135 (257)
T ss_pred CCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEE
Confidence 579999999998865 457899999998 699999976 3458999999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++.++|+|||.++....... ......+++.|+|||.+. +..++.++|+||+||++++|++|
T Consensus 136 ~~~~~~~l~df~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~~l~~g 198 (257)
T cd08223 136 TRTNIIKVGDLGIARVLENQCD-------MASTLIGTPYYMSPELFS----------NKPYNYKSDVWALGCCVYEMATL 198 (257)
T ss_pred ecCCcEEEecccceEEecccCC-------ccccccCCcCccChhHhc----------CCCCCchhhhHHHHHHHHHHHcC
Confidence 9999999999999875532211 112345678899999764 34577899999999999999999
Q ss_pred CCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
++||...+........ ....+..+...++.+.++|.+||+.||++||++.++++|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 199 KHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 8888754433221110 111122344567889999999999999999999999998
No 206
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.94 E-value=5.3e-26 Score=260.89 Aligned_cols=196 Identities=15% Similarity=0.108 Sum_probs=155.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++......|+||||++ ++|.+++..+ ..+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 56 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~ 135 (256)
T cd05059 56 LSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGE 135 (256)
T ss_pred CCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECC
Confidence 579999999999999999999999998 5999999763 46899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.+||+|||.++....+.. . ......++..|+|||.+. ...++.++||||+||++|||++ |.
T Consensus 136 ~~~~kl~dfg~~~~~~~~~~-----~-~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Di~slG~il~~l~~~g~ 199 (256)
T cd05059 136 DNVVKVSDFGLARYVLDDQY-----T-SSQGTKFPVKWAPPEVFD----------YSRFSSKSDVWSFGVLMWEVFSEGK 199 (256)
T ss_pred CCcEEECCcccceecccccc-----c-ccCCCCCCccccCHHHhc----------cCCCCchhhHHHHHHHHHHHhccCC
Confidence 99999999998875421110 0 001112345699999764 3357889999999999999999 68
Q ss_pred CCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 158 PFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 158 ~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+||........ ...........+...+..+.+++.+||..+|++||++.|+++.+
T Consensus 200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 200 MPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 88864332221 11111122234455678999999999999999999999999864
No 207
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.94 E-value=5.9e-26 Score=264.14 Aligned_cols=196 Identities=13% Similarity=0.121 Sum_probs=155.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.. ...++++||++ |+|.+++.. .+.+++..+..++.||+.||.|||++|++||||||+|||++.
T Consensus 66 l~h~~iv~~~~~~~~-~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~ 144 (279)
T cd05111 66 LDHAYIVRLLGICPG-ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKS 144 (279)
T ss_pred CCCCCcceEEEEECC-CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC
Confidence 479999999998754 55788999999 799999976 456899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.+||+|||.++..... ..........++..|+|||.+. ...++.++|||||||++|||++ |.
T Consensus 145 ~~~~kl~Dfg~~~~~~~~-----~~~~~~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~el~t~g~ 209 (279)
T cd05111 145 DSIVQIADFGVADLLYPD-----DKKYFYSEHKTPIKWMALESIL----------FGRYTHQSDVWSYGVTVWEMMSYGA 209 (279)
T ss_pred CCcEEEcCCccceeccCC-----CcccccCCCCCcccccCHHHhc----------cCCcCchhhHHHHHHHHHHHHcCCC
Confidence 999999999998754211 1112223445667899999764 3467899999999999999998 88
Q ss_pred CCCCchHHHH---HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 158 PFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~pf~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
+||....... ..... .....+...+..+.+++.+||..||++||++.|+++.+..
T Consensus 210 ~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~ 267 (279)
T cd05111 210 EPYAGMRPHEVPDLLEKG--ERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTR 267 (279)
T ss_pred CCCCCCCHHHHHHHHHCC--CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 8886543322 22211 1112334556789999999999999999999999998654
No 208
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.94 E-value=5.6e-26 Score=268.33 Aligned_cols=192 Identities=16% Similarity=0.128 Sum_probs=154.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.++...|+||||++ ++|.+++...+.+++..++.++.||+.||.|||+ .+++||||||+|||++.
T Consensus 56 l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~ 135 (308)
T cd06615 56 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNS 135 (308)
T ss_pred CCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEec
Confidence 589999999999999999999999999 5999999887789999999999999999999997 69999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||++...... ......++..|+|||.+. +..++.++|+||+||++|+|++|.+
T Consensus 136 ~~~~~l~dfg~~~~~~~~---------~~~~~~~~~~~~aPE~~~----------~~~~~~~~DiwslG~~l~~l~~g~~ 196 (308)
T cd06615 136 RGEIKLCDFGVSGQLIDS---------MANSFVGTRSYMSPERLQ----------GTHYTVQSDIWSLGLSLVEMAIGRY 196 (308)
T ss_pred CCcEEEccCCCccccccc---------ccccCCCCcCccChhHhc----------CCCCCccchHHHHHHHHHHHHhCCC
Confidence 999999999987643211 112345678899999763 3357889999999999999999988
Q ss_pred CCCchHHHHHHh---cCC----------------------------------CCCcccC-CCCCHHHHHHHHHhcccCcC
Q 000470 159 FFELSHLLAYRR---GQY----------------------------------DPSQHLE-KIPDSGIRKMILHMIQLEPE 200 (1472)
Q Consensus 159 pf~~~~~~~~~~---~~~----------------------------------~~~~~l~-~~~~~~l~~LI~~mL~~dP~ 200 (1472)
||.......... ... ...+.++ ...+.++++||.+||..||+
T Consensus 197 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 276 (308)
T cd06615 197 PIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPK 276 (308)
T ss_pred CCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChh
Confidence 885433221110 000 0000111 12466899999999999999
Q ss_pred CCCCHHHHHHH
Q 000470 201 LRFSAESYLQN 211 (1472)
Q Consensus 201 ~Rpsa~elL~~ 211 (1472)
+||++.|+++|
T Consensus 277 ~Rpt~~~ll~~ 287 (308)
T cd06615 277 ERADLKELTKH 287 (308)
T ss_pred hCcCHHHHhcC
Confidence 99999999998
No 209
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.94 E-value=5.1e-26 Score=261.08 Aligned_cols=196 Identities=13% Similarity=0.104 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|++|||+. |+|.+++... ..+++.++..++.||+.||.|||++|++|+||||+||+++.
T Consensus 56 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~ 135 (256)
T cd05113 56 LSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDD 135 (256)
T ss_pred CCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC
Confidence 579999999999999889999999998 6999999763 46899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.+||+|||.++....+. ... .....++..|+|||.+. ...++.++|||||||++|||++ |.
T Consensus 136 ~~~~kl~d~g~~~~~~~~~-----~~~-~~~~~~~~~y~~pe~~~----------~~~~~~~~Di~slG~~l~~l~~~g~ 199 (256)
T cd05113 136 QGCVKVSDFGLSRYVLDDE-----YTS-SVGSKFPVRWSPPEVLL----------YSKFSSKSDVWAFGVLMWEVYSLGK 199 (256)
T ss_pred CCCEEECCCccceecCCCc-----eee-cCCCccChhhCCHHHHh----------cCcccchhHHHHHHHHHHHHhcCCC
Confidence 9999999999887542211 100 11122456799999764 3357889999999999999998 88
Q ss_pred CCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 158 PFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 158 ~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
.||........ ...........+...+..+++++.+||+.||++||++.++++++
T Consensus 200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 200 MPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 88864332211 11111111223445678899999999999999999999999874
No 210
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.94 E-value=1.5e-27 Score=254.89 Aligned_cols=194 Identities=20% Similarity=0.112 Sum_probs=160.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
|+.|+||+||+.|-....+|+|||||. |+..|.++. ++.|++.|+..++...++||+|||...-+|||||..|||++.
T Consensus 85 C~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT 164 (502)
T KOG0574|consen 85 CKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNT 164 (502)
T ss_pred cCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcc
Confidence 678999999999999999999999999 999999976 466999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
+|+.||+|||.+.... +...-..+..||+.|||||++.. -.|+.++||||||++..||..|+|
T Consensus 165 ~G~AKLADFGVAGQLT-------DTMAKRNTVIGTPFWMAPEVI~E----------IGY~~~ADIWSLGITaIEMAEG~P 227 (502)
T KOG0574|consen 165 DGIAKLADFGVAGQLT-------DTMAKRNTVIGTPFWMAPEVIEE----------IGYDTKADIWSLGITAIEMAEGRP 227 (502)
T ss_pred cchhhhhhccccchhh-------hhHHhhCccccCcccccHHHHHH----------hccchhhhHhhhcchhhhhhcCCC
Confidence 9999999999886542 11122356779999999998763 357789999999999999999999
Q ss_pred CCCchHH-HHHHhcCCCCCcc--cCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHL-LAYRRGQYDPSQH--LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~-~~~~~~~~~~~~~--l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||..-.. ..+.-....|.+. -+...+.++.++|++||.++|++|-||-++++|
T Consensus 228 PYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 228 PYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 9963221 1111112222222 233456789999999999999999999999998
No 211
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.94 E-value=5.8e-26 Score=269.14 Aligned_cols=201 Identities=21% Similarity=0.183 Sum_probs=156.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++.++.+...|+||||+. ++|.+++... ..+++..++.++.|++.||.|||++|++||||||+||+++
T Consensus 58 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~ 137 (316)
T cd05574 58 LDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH 137 (316)
T ss_pred CCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc
Confidence 579999999999999999999999998 5999998764 4689999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCC----------------------CceeeccCCCCccccCcccccccCCccccccCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSD----------------------FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDA 135 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~----------------------~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~ 135 (1472)
.++.++|+|||++............ .........|+..|+|||.+. +.
T Consensus 138 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~----------~~ 207 (316)
T cd05574 138 ESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS----------GD 207 (316)
T ss_pred CCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHc----------CC
Confidence 9999999999987654321110000 000112234678899999764 33
Q ss_pred CCCccchHHHHHHHHHHHHhCCCCCCchHHHH-HHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCC----HHHHH
Q 000470 136 PLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-YRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFS----AESYL 209 (1472)
Q Consensus 136 ~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps----a~elL 209 (1472)
.++.++|||||||++|+|++|..||....... +..... ..........++.++++|.+||+.||++||+ ++|++
T Consensus 208 ~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll 287 (316)
T cd05574 208 GHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIK 287 (316)
T ss_pred CCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHH
Confidence 56889999999999999999998886543322 211111 1111111225788999999999999999999 99999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 288 ~~ 289 (316)
T cd05574 288 QH 289 (316)
T ss_pred cC
Confidence 98
No 212
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.94 E-value=6e-26 Score=267.64 Aligned_cols=201 Identities=18% Similarity=0.169 Sum_probs=156.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.++++...|+||||++ ++|.+++...+.+++..+..++.|++.||+|||++||+||||||+||+++.+
T Consensus 58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~ 137 (305)
T cd05609 58 AENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSM 137 (305)
T ss_pred CCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCC
Confidence 479999999999999999999999999 5999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCC--------CCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 80 NWLYLSDFASFKPTYIPYDD--------PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~--------~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
+.++|+|||.++........ ............++..|+|||.+. ...++.++|||||||++|
T Consensus 138 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~vl~ 207 (305)
T cd05609 138 GHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVIL----------RQGYGKPVDWWAMGIILY 207 (305)
T ss_pred CCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhcc----------CCCCCchhhHHHHHHHHH
Confidence 99999999988642111100 000011112345678899999775 235788999999999999
Q ss_pred HHHhCCCCCCchHHHHHHh---cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC---HHHHHHH
Q 000470 152 ELFLEVPFFELSHLLAYRR---GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS---AESYLQN 211 (1472)
Q Consensus 152 eLltg~~pf~~~~~~~~~~---~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps---a~elL~~ 211 (1472)
||++|..||......+... ......+......+..++++|.+||+.||++||+ +.++++|
T Consensus 208 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 208 EFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 9999988886543332221 1111111222345678999999999999999997 6888877
No 213
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.94 E-value=5.9e-26 Score=261.60 Aligned_cols=188 Identities=18% Similarity=0.145 Sum_probs=150.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ |+|..++.. ...+++.+++.++.||+.||+|||++||+||||||+|||++.
T Consensus 61 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~ 140 (262)
T cd05077 61 VSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAR 140 (262)
T ss_pred CCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEec
Confidence 579999999999999999999999999 688888865 356899999999999999999999999999999999999987
Q ss_pred CCc-------EEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 79 WNW-------LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 79 ~~~-------vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
++. ++++|||.+...... ....++..|+|||.+. ....++.++|||||||++|
T Consensus 141 ~~~~~~~~~~~~l~d~g~~~~~~~~-----------~~~~~~~~y~aPE~~~---------~~~~~~~~~DiwslG~~l~ 200 (262)
T cd05077 141 EGIDGECGPFIKLSDPGIPITVLSR-----------QECVERIPWIAPECVE---------DSKNLSIAADKWSFGTTLW 200 (262)
T ss_pred CCccCCCCceeEeCCCCCCccccCc-----------ccccccccccChhhhc---------CCCCCCchhHHHHHHHHHH
Confidence 664 899999987644211 1233567799999763 1345788999999999999
Q ss_pred HHH-hCCCCCCchHHHHHH---hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 152 ELF-LEVPFFELSHLLAYR---RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 152 eLl-tg~~pf~~~~~~~~~---~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
||+ .|.+||......... ..... .....++++++||.+||+.||++||++.++++++
T Consensus 201 el~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 201 EICYNGEIPLKDKTLAEKERFYEGQCM----LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHhCCCCCCCCcchhHHHHHHhcCcc----CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 997 478888654433222 22211 1122346799999999999999999999999874
No 214
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94 E-value=5.9e-26 Score=267.56 Aligned_cols=198 Identities=15% Similarity=0.136 Sum_probs=156.6
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
+||||+++++++..+...|+||||++ |+|.+++..+ ..++..++..++.||+.||.|||++||
T Consensus 79 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~gi 158 (304)
T cd05101 79 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKC 158 (304)
T ss_pred cCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCe
Confidence 69999999999999999999999999 6999999753 246788899999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+||+++.++.++|+|||.++....... ........++..|+|||.+. +..++.++|||
T Consensus 159 vH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~ 223 (304)
T cd05101 159 IHRDLAARNVLVTENNVMKIADFGLARDVNNIDY-----YKKTTNGRLPVKWMAPEALF----------DRVYTHQSDVW 223 (304)
T ss_pred eecccccceEEEcCCCcEEECCCccceecccccc-----cccccCCCCCceeeCchhhc----------cCCCCchhhHH
Confidence 9999999999999999999999999875522111 11112233456799999764 34578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||||++|||++ |.+||............ .......+...+..+++||.+||..+|++||++.|+++.++.
T Consensus 224 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~ 295 (304)
T cd05101 224 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR 295 (304)
T ss_pred HHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 99999999998 68888654443332211 111122334566889999999999999999999999998653
No 215
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.94 E-value=7.4e-26 Score=259.97 Aligned_cols=200 Identities=16% Similarity=0.068 Sum_probs=154.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++++++. ...|+||||++ ++|.+++.. +..+++.++..++.||+.||.|||++|++||||||+|||++.
T Consensus 52 l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~ 130 (257)
T cd05115 52 LDNPYIVRMIGVCEA-EALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVN 130 (257)
T ss_pred cCCCCeEEEEEEEcC-CCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcC
Confidence 579999999999864 47899999998 699999975 456899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.++....... .........++..|+|||.+. ...++.++|||||||++|||++ |.
T Consensus 131 ~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~g~ 196 (257)
T cd05115 131 QHYAKISDFGLSKALGADDS----YYKARSAGKWPLKWYAPECIN----------FRKFSSRSDVWSYGITMWEAFSYGQ 196 (257)
T ss_pred CCcEEeccCCccccccCCcc----ceeccCCCCCCcccCCHHHHc----------cCCCCchhhHHHHHHHHHHHhcCCC
Confidence 99999999998875422111 000011122346799999764 3357889999999999999996 88
Q ss_pred CCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcc
Q 000470 158 PFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 215 (1472)
Q Consensus 158 ~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 215 (1472)
+||.......... .........+...++++.++|.+||..||++||++.++.+.++..
T Consensus 197 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 197 KPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 8886433222111 111112234455678999999999999999999999999986543
No 216
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.94 E-value=1e-25 Score=259.95 Aligned_cols=197 Identities=14% Similarity=0.096 Sum_probs=157.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..++..|++|||++ ++|.+++.. .+.+++.++..++.|++.||.|||++||+||||||+||+++.
T Consensus 62 l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~ 141 (266)
T cd05033 62 FDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNS 141 (266)
T ss_pred CCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC
Confidence 579999999999999999999999998 599999976 346899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.++....... ........++..|+|||.+. ...++.++|||||||++|+|++ |.
T Consensus 142 ~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Dv~slG~~l~~l~~~g~ 206 (266)
T cd05033 142 NLVCKVSDFGLSRRLEDSEA-----TYTTKGGKIPIRWTAPEAIA----------YRKFTSASDVWSFGIVMWEVMSYGE 206 (266)
T ss_pred CCCEEECccchhhccccccc-----ceeccCCCCCccccChhhhc----------cCCCccccchHHHHHHHHHHHccCC
Confidence 99999999999886631111 11111233456799999764 3357889999999999999998 88
Q ss_pred CCCCchHHHH---HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 158 PFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~pf~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.||....... .....+.. ..+...++.+.+++.+||+.+|++||+++|+++++..
T Consensus 207 ~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 207 RPYWDMSNQDVIKAVEDGYRL--PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred CCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 7874322221 12222111 2234556889999999999999999999999998653
No 217
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.94 E-value=1.4e-25 Score=240.17 Aligned_cols=292 Identities=20% Similarity=0.324 Sum_probs=234.0
Q ss_pred cccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCc--cccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q 000470 1057 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE--KDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFS 1134 (1472)
Q Consensus 1057 H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e--~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwd 1134 (1472)
.+.-+-|..|||||+|++|||.||-+.|||..+++ +...+...-.+-.+...|.|+.|+.++..+|+|+.||.|+||+
T Consensus 212 ~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWr 291 (508)
T KOG0275|consen 212 QKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWR 291 (508)
T ss_pred cccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEE
Confidence 44567788999999999999999999999988765 4444555555556778899999999999999999999999999
Q ss_pred ccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEE
Q 000470 1135 VDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSS 1214 (1472)
Q Consensus 1135 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Its 1214 (1472)
+.+. .++|.++..|...|+++.|+.| +..+++++.|.++++-.+++|++...+.+ |...|+.
T Consensus 292 i~tG-------------~ClRrFdrAHtkGvt~l~FSrD---~SqiLS~sfD~tvRiHGlKSGK~LKEfrG--HsSyvn~ 353 (508)
T KOG0275|consen 292 IETG-------------QCLRRFDRAHTKGVTCLSFSRD---NSQILSASFDQTVRIHGLKSGKCLKEFRG--HSSYVNE 353 (508)
T ss_pred Eecc-------------hHHHHhhhhhccCeeEEEEccC---cchhhcccccceEEEeccccchhHHHhcC--ccccccc
Confidence 9852 2567777788888999999998 55899999999999999999999999987 9999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccc-cCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCC
Q 000470 1215 LVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ-VCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAEN 1293 (1472)
Q Consensus 1215 l~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~-~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t 1293 (1472)
..|.++|+.++++++||+|++|+..+..|+.+++... ..+|+.+.. .|.. ...++++.-.++|.|-++.
T Consensus 354 a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~-~PKn--------peh~iVCNrsntv~imn~q- 423 (508)
T KOG0275|consen 354 ATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVIL-LPKN--------PEHFIVCNRSNTVYIMNMQ- 423 (508)
T ss_pred eEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEE-cCCC--------CceEEEEcCCCeEEEEecc-
Confidence 9999999999999999999999999999999998754 457777766 3422 2367888888999998886
Q ss_pred CeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCC
Q 000470 1294 GSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDL 1372 (1472)
Q Consensus 1294 ~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg 1372 (1472)
|+.++.|......+ +..-+.+.+|.| ++.+.|+|+
T Consensus 424 GQvVrsfsSGkREg--------------------------------------------GdFi~~~lSpkGewiYcigED~ 459 (508)
T KOG0275|consen 424 GQVVRSFSSGKREG--------------------------------------------GDFINAILSPKGEWIYCIGEDG 459 (508)
T ss_pred ceEEeeeccCCccC--------------------------------------------CceEEEEecCCCcEEEEEccCc
Confidence 67776665322100 012344455766 788999999
Q ss_pred eEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeee
Q 000470 1373 KIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSV 1452 (1472)
Q Consensus 1373 ~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~ 1452 (1472)
.++.+...+++.-..+. -|..-|-.++ -
T Consensus 460 vlYCF~~~sG~LE~tl~---------------------------------------------------VhEkdvIGl~-H 487 (508)
T KOG0275|consen 460 VLYCFSVLSGKLERTLP---------------------------------------------------VHEKDVIGLT-H 487 (508)
T ss_pred EEEEEEeecCceeeeee---------------------------------------------------cccccccccc-c
Confidence 99999877665432221 1555555664 6
Q ss_pred ecCCcEEEEEcCCceEEEcC
Q 000470 1453 KLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1453 ~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+|..+.|+|-+.||.+|+||
T Consensus 488 HPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 488 HPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred CcccchhhhhcccchhhhcC
Confidence 78899999999999999997
No 218
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.94 E-value=3.4e-26 Score=293.00 Aligned_cols=194 Identities=19% Similarity=0.217 Sum_probs=150.7
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHC-------CCee
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEK-------GICH 66 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~-------gIvH 66 (1472)
|+||||++++++|.. ...+||||||++ |+|.++|.. ...+++..++.|+.||+.||.|||+. +|+|
T Consensus 69 L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVH 148 (1021)
T PTZ00266 69 LKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLH 148 (1021)
T ss_pred cCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCcee
Confidence 589999999998854 457999999999 699999865 24699999999999999999999995 4999
Q ss_pred cCCCCCCEEEccC-----------------CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCcc
Q 000470 67 GDIKCENVLVTSW-----------------NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129 (1472)
Q Consensus 67 ~DLKpeNILv~~~-----------------~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~ 129 (1472)
|||||+|||++.. +.+||+|||+++...... ......|++.|+|||++..
T Consensus 149 RDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--------~~~s~vGTp~YmAPEvL~g----- 215 (1021)
T PTZ00266 149 RDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES--------MAHSCVGTPYYWSPELLLH----- 215 (1021)
T ss_pred ccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc--------cccccCCCccccCHHHHhc-----
Confidence 9999999999642 348999999987542111 1134467999999998752
Q ss_pred ccccCCCCCccchHHHHHHHHHHHHhCCCCCCchH-HHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 000470 130 QVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAES 207 (1472)
Q Consensus 130 ~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~e 207 (1472)
....++.++|||||||++|||++|.+||.... ...+.... ..+...+ ...+..+.+||.+||..+|.+||++.|
T Consensus 216 ---e~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi-~~~S~eL~dLI~~~L~~dPeeRPSa~Q 291 (1021)
T PTZ00266 216 ---ETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPI-KGKSKELNILIKNLLNLSAKERPSALQ 291 (1021)
T ss_pred ---cCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCc-CCCCHHHHHHHHHHhcCChhHCcCHHH
Confidence 13357889999999999999999998985332 22221111 1111111 234678999999999999999999999
Q ss_pred HHHH
Q 000470 208 YLQN 211 (1472)
Q Consensus 208 lL~~ 211 (1472)
+|.|
T Consensus 292 lL~h 295 (1021)
T PTZ00266 292 CLGY 295 (1021)
T ss_pred Hhcc
Confidence 9986
No 219
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.94 E-value=2.8e-26 Score=274.11 Aligned_cols=199 Identities=20% Similarity=0.296 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEe----CCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQET----DKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~----~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||++++++++. ....|+||||+.++|.+++.....+++.+++.++.||+.||.|||++||+||||||+||++
T Consensus 61 l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~ 140 (334)
T cd07855 61 FKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV 140 (334)
T ss_pred cCCCCccCHHHhccccCCCCceEEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence 579999999998863 3578999999999999999887779999999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++.+||+|||.++........ ...+.....++..|+|||.+.. ...++.++||||+||++|||++|
T Consensus 141 ~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Di~slG~~l~el~~g 208 (334)
T cd07855 141 NEDCELRIGDFGMARGLSSSPTE---HKYFMTEYVATRWYRAPELLLS---------LPEYTTAIDMWSVGCIFAEMLGR 208 (334)
T ss_pred cCCCcEEecccccceeecccCcC---CCcccccccccccccChHHhcC---------CcccccccchHHHHHHHHHHHcC
Confidence 99999999999998755332211 1222234467888999998742 23578899999999999999999
Q ss_pred CCCCCchHHHH----HHh--c--------------------CCCCCc-----ccCCCCCHHHHHHHHHhcccCcCCCCCH
Q 000470 157 VPFFELSHLLA----YRR--G--------------------QYDPSQ-----HLEKIPDSGIRKMILHMIQLEPELRFSA 205 (1472)
Q Consensus 157 ~~pf~~~~~~~----~~~--~--------------------~~~~~~-----~l~~~~~~~l~~LI~~mL~~dP~~Rpsa 205 (1472)
++||....... +.. + ...... .+....++.++++|.+||+.||++||++
T Consensus 209 ~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~ 288 (334)
T cd07855 209 RQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITV 288 (334)
T ss_pred CCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCH
Confidence 99996432110 000 0 000000 1112346789999999999999999999
Q ss_pred HHHHHH
Q 000470 206 ESYLQN 211 (1472)
Q Consensus 206 ~elL~~ 211 (1472)
++++.|
T Consensus 289 ~~~l~~ 294 (334)
T cd07855 289 EQALQH 294 (334)
T ss_pred HHHHhC
Confidence 999998
No 220
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.94 E-value=5.5e-26 Score=262.66 Aligned_cols=203 Identities=16% Similarity=0.133 Sum_probs=153.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-----FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-----~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++.+......|+||||++ |+|.+++.... ..++.....++.||+.||+|||++||+||||||+||
T Consensus 52 l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Ni 131 (269)
T cd05042 52 LNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNC 131 (269)
T ss_pred CCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhhe
Confidence 579999999999999999999999999 69999997632 246778899999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
|++.++.+||+|||++....... .........++..|+|||.+...... .....++.++||||+||++|||+
T Consensus 132 ll~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~~~~~~~~DiwslG~~l~el~ 203 (269)
T cd05042 132 QLTADLSVKIGDYGLALEQYPED-----YYITKDCHAVPLRWLAPELVEIRGQD---LLPKDQTKKSNIWSLGVTMWELF 203 (269)
T ss_pred EecCCCcEEEeccccccccccch-----heeccCCCCCcccccCHHHHhhcccc---ccccccchhhHHHHHHHHHHHHH
Confidence 99999999999999876432110 00001222345679999987532211 12346788999999999999999
Q ss_pred h-CCCCCCchH-HH---HHHh-cCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 155 L-EVPFFELSH-LL---AYRR-GQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 155 t-g~~pf~~~~-~~---~~~~-~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+ |.+||.... .. .... .... +.+.++...++.+.+++..|+ .||++||+++|+++.+
T Consensus 204 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 204 TAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred hCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 9 688885432 11 1111 1111 223345566778899999998 5999999999999763
No 221
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.93 E-value=5.4e-26 Score=263.04 Aligned_cols=195 Identities=15% Similarity=0.060 Sum_probs=153.7
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
+||||+++++++..+...|++|||++ |+|.+++..+. .+++.++++++.|++.||+|||++|+
T Consensus 54 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i 133 (270)
T cd05047 54 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF 133 (270)
T ss_pred cCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 69999999999999999999999998 79999996532 47899999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||++.++.++|+|||++...... .. ......+..|+|||.+. ...++.++|||
T Consensus 134 ~H~dikp~nili~~~~~~kl~dfgl~~~~~~~---~~-----~~~~~~~~~y~apE~~~----------~~~~~~~~Di~ 195 (270)
T cd05047 134 IHRDLAARNILVGENYVAKIADFGLSRGQEVY---VK-----KTMGRLPVRWMAIESLN----------YSVYTTNSDVW 195 (270)
T ss_pred eecccccceEEEcCCCeEEECCCCCccccchh---hh-----ccCCCCccccCChHHHc----------cCCCCchhhHH
Confidence 99999999999999999999999987532110 00 01122345699999764 34578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||||++|||++ |.+||.......... .........+...+..+.+|+.+||..||.+||++.++++.+..
T Consensus 196 slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~ 267 (270)
T cd05047 196 SYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 267 (270)
T ss_pred HHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 99999999997 888886443322211 11111222334456789999999999999999999999998653
No 222
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.93 E-value=6.8e-26 Score=262.90 Aligned_cols=191 Identities=17% Similarity=0.180 Sum_probs=150.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ |+|.+++.. ++.+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 73 l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~ 152 (274)
T cd05076 73 VSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLAR 152 (274)
T ss_pred CCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEec
Confidence 589999999999999999999999999 689988865 567899999999999999999999999999999999999986
Q ss_pred CC-------cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 79 WN-------WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 79 ~~-------~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
.+ .++++|||.+...... ....++..|+|||.+.. ...++.++|||||||++|
T Consensus 153 ~~~~~~~~~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~---------~~~~~~~~Dv~slG~~l~ 212 (274)
T cd05076 153 LGLAEGTSPFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPG---------GNSLSTAADKWSFGTTLL 212 (274)
T ss_pred cCcccCccceeeecCCccccccccc-----------cccccCCcccCchhhcC---------CCCCCcHHHHHHHHHHHH
Confidence 54 3899999987543211 12235677999997742 245788999999999999
Q ss_pred HHH-hCCCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 152 ELF-LEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 152 eLl-tg~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
||+ +|.+||........... +......+....+.+.++|.+||+.+|++||++.++++++
T Consensus 213 el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 213 EICFDGEVPLKERTPSEKERF-YEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHhCCCCCccccChHHHHHH-HHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 995 67888864322211110 0011112233346799999999999999999999999875
No 223
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.93 E-value=9e-26 Score=259.66 Aligned_cols=195 Identities=14% Similarity=0.102 Sum_probs=155.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..++..|++|||++ ++|.+++.... .+++.++..++.|++.||.+||++||+||||||+||+++
T Consensus 58 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~ 137 (261)
T cd05068 58 LRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG 137 (261)
T ss_pred CCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc
Confidence 579999999999999999999999996 79999997654 689999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
.++.++|+|||+++........ .......+..|+|||.+. ...++.++|||||||++|||++ |
T Consensus 138 ~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~t~g 201 (261)
T cd05068 138 ENNICKVADFGLARVIKEDIYE------AREGAKFPIKWTAPEAAL----------YNRFSIKSDVWSFGILLTEIVTYG 201 (261)
T ss_pred CCCCEEECCcceEEEccCCccc------ccCCCcCceeccCccccc----------cCCCCchhhHHHHHHHHHHHHhcC
Confidence 9999999999998766311100 001111235699999764 3457889999999999999999 8
Q ss_pred CCCCCchHHHH---HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
++||....... ....... ...+...+..+.+++.+||+.+|++||+++++++.++
T Consensus 202 ~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~ 259 (261)
T cd05068 202 RMPYPGMTNAEVLQQVDQGYR--MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLE 259 (261)
T ss_pred CCCCCCCCHHHHHHHHHcCCC--CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 99996533222 1122221 1233445678999999999999999999999998754
No 224
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.93 E-value=2.7e-26 Score=260.20 Aligned_cols=186 Identities=17% Similarity=0.200 Sum_probs=153.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
.||||+++++++..+...|+||||++ |+|.+++...+.+++.++..++.|++.||+|||++||+||||||+||+++.++
T Consensus 43 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~ 122 (237)
T cd05576 43 CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRG 122 (237)
T ss_pred CCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC
Confidence 58999999999999999999999999 69999998877799999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||.+...... .....++..|+|||.+. ...++.++|+||+||++|||++|.++|
T Consensus 123 ~~~l~df~~~~~~~~~----------~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~g~~~~ 182 (237)
T cd05576 123 HIQLTYFSRWSEVEDS----------CDGEAVENMYCAPEVGG----------ISEETEACDWWSLGAILFELLTGKTLV 182 (237)
T ss_pred CEEEecccchhccccc----------cccCCcCccccCCcccC----------CCCCCchhhHHHHHHHHHHHHHCcchh
Confidence 9999999977544211 12233466799999653 335688999999999999999998877
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 211 (1472)
....... .......++...++.++++|.+||+.||++|+++ +++++|
T Consensus 183 ~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 234 (237)
T cd05576 183 ECHPSGI----NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSH 234 (237)
T ss_pred hcCchhc----ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcC
Confidence 6432110 0011123445567889999999999999999986 888887
No 225
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.93 E-value=4.6e-26 Score=265.01 Aligned_cols=192 Identities=24% Similarity=0.314 Sum_probs=152.6
Q ss_pred CCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 2 SSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
+||||+++++++.++ +..|+||||++++|.+.+..+ ..+++.++..++.|++.||+|||++||+||||||+||+++.
T Consensus 56 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~ 135 (282)
T cd07831 56 PHPNILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD 135 (282)
T ss_pred CCCCccceEEEEecCCCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC
Confidence 599999999999987 899999999999999998763 56899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
+.++|+|||.++....... . ....++..|+|||.+.. ...++.++||||+||++|||++|.+
T Consensus 136 -~~~kl~dfg~~~~~~~~~~----~----~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slGv~l~el~~~~~ 197 (282)
T cd07831 136 -DILKLADFGSCRGIYSKPP----Y----TEYISTRWYRAPECLLT---------DGYYGPKMDIWAVGCVFFEILSLFP 197 (282)
T ss_pred -CCeEEEecccccccccCCC----c----CCCCCCcccCChhHhhc---------CCCCCcchhHHHHHHHHHHHHcCCc
Confidence 9999999999875532111 1 12345788999997642 2356789999999999999999999
Q ss_pred CCCchHHHH----HHhc------------------CCCCCc-------ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 159 FFELSHLLA----YRRG------------------QYDPSQ-------HLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 159 pf~~~~~~~----~~~~------------------~~~~~~-------~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
||...+... .... .+.... .+....+..+++||.+||++||++||++++++
T Consensus 198 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l 277 (282)
T cd07831 198 LFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQAL 277 (282)
T ss_pred CCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHh
Confidence 996443211 1000 000000 01123467899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 278 ~~ 279 (282)
T cd07831 278 RH 279 (282)
T ss_pred hC
Confidence 98
No 226
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.93 E-value=4.1e-26 Score=266.33 Aligned_cols=193 Identities=17% Similarity=0.177 Sum_probs=155.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++|+||+++++.+.++...|+||||+. ++|.+++... ..+++.++..++.|++.||.|||++||+||||||+||+++
T Consensus 57 l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~ 136 (285)
T cd05630 57 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD 136 (285)
T ss_pred CCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC
Confidence 579999999999999999999999998 6999988543 3489999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
..+.++|+|||++....... ......|+..|+|||.+. +..++.++||||+||++|+|++|.
T Consensus 137 ~~~~~~l~Dfg~~~~~~~~~--------~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~~l~~l~~g~ 198 (285)
T cd05630 137 DHGHIRISDLGLAVHVPEGQ--------TIKGRVGTVGYMAPEVVK----------NERYTFSPDWWALGCLLYEMIAGQ 198 (285)
T ss_pred CCCCEEEeeccceeecCCCc--------cccCCCCCccccChHHHc----------CCCCCCccccHHHHHHHHHHHhCC
Confidence 99999999999876432110 112335788999999774 345788999999999999999999
Q ss_pred CCCCchHH----HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 158 PFFELSHL----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
+||..... ..............+...++.+++||.+||+.||++||+ ++|+++|
T Consensus 199 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 199 SPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred CCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 99974321 111111111122244456788999999999999999999 9999998
No 227
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.93 E-value=6.7e-26 Score=265.54 Aligned_cols=195 Identities=23% Similarity=0.335 Sum_probs=154.7
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+ ...|+||||++++|.+++... ..+++.+++.++.||+.||+|||++||+||||||+||+++
T Consensus 61 l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~ 140 (293)
T cd07843 61 LQHPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN 140 (293)
T ss_pred cCCCCEEEEEEEEEecCCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC
Confidence 5799999999999887 899999999999999998764 3589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.+.....+... .....+++.|+|||.+.. ...++.++||||+||++|||++|.
T Consensus 141 ~~~~~~l~d~g~~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~~g~ 204 (293)
T cd07843 141 NRGILKICDFGLAREYGSPLKP-------YTQLVVTLWYRAPELLLG---------AKEYSTAIDMWSVGCIFAELLTKK 204 (293)
T ss_pred CCCcEEEeecCceeeccCCccc-------cccccccccccCchhhcC---------CccccchhhHHHHHHHHHHHHhCC
Confidence 9999999999988765432211 122335778999998742 224678999999999999999999
Q ss_pred CCCCchHHHH----HHhcC--------------------------CC-CCcccCCC-CCHHHHHHHHHhcccCcCCCCCH
Q 000470 158 PFFELSHLLA----YRRGQ--------------------------YD-PSQHLEKI-PDSGIRKMILHMIQLEPELRFSA 205 (1472)
Q Consensus 158 ~pf~~~~~~~----~~~~~--------------------------~~-~~~~l~~~-~~~~l~~LI~~mL~~dP~~Rpsa 205 (1472)
+||....... +.... +. ....++.. .++.++++|.+||+.||++|||+
T Consensus 205 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~ 284 (293)
T cd07843 205 PLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISA 284 (293)
T ss_pred CCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCH
Confidence 9996432111 10000 00 01112222 46789999999999999999999
Q ss_pred HHHHHH
Q 000470 206 ESYLQN 211 (1472)
Q Consensus 206 ~elL~~ 211 (1472)
+|+++|
T Consensus 285 ~ell~~ 290 (293)
T cd07843 285 EDALKH 290 (293)
T ss_pred HHHhcC
Confidence 999998
No 228
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2e-26 Score=259.66 Aligned_cols=192 Identities=19% Similarity=0.251 Sum_probs=162.6
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
+.|.||.+-..|++..++|+|+..|. |+|.-.|..- +.+++..+++++.||++||++||+++||.|||||+|||+|+
T Consensus 243 ~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd 322 (591)
T KOG0986|consen 243 SSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDD 322 (591)
T ss_pred ccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeecc
Confidence 57899999999999999999999999 6998888663 47999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
.|++.|+|+|+|..+. +..+ .....||..|||||++. +..|+...|.|||||+||||+.|+.
T Consensus 323 ~GhvRISDLGLAvei~--~g~~------~~~rvGT~GYMAPEvl~----------ne~Y~~s~Dwf~lGCllYemi~G~s 384 (591)
T KOG0986|consen 323 HGHVRISDLGLAVEIP--EGKP------IRGRVGTVGYMAPEVLQ----------NEVYDFSPDWFSLGCLLYEMIAGHS 384 (591)
T ss_pred CCCeEeeccceEEecC--CCCc------cccccCcccccCHHHHc----------CCcccCCccHHHHHhHHHHHHcccC
Confidence 9999999999997552 2222 24457899999999875 4469999999999999999999999
Q ss_pred CCCchH----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 159 FFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 159 pf~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
||.... ..+..+........++...++++++|.+.+|.+||.+|. .++++.+|
T Consensus 385 PFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 385 PFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred chhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence 996432 223444444445567788899999999999999999998 46788888
No 229
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.93 E-value=5.8e-26 Score=284.77 Aligned_cols=195 Identities=17% Similarity=0.145 Sum_probs=149.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-----~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||++++++++.+...|+|+|++.++|++++... ......+++.|+.||+.||+|||++||+||||||+|||
T Consensus 220 l~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NIL 299 (501)
T PHA03210 220 LNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIF 299 (501)
T ss_pred CCCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 5899999999999999999999999999999987543 22346678889999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.+||+|||+++....... .......|+..|+|||.+. +..++.++|||||||++|||++
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~ell~ 363 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKERE------AFDYGWVGTVATNSPEILA----------GDGYCEITDIWSCGLILLDMLS 363 (501)
T ss_pred ECCCCCEEEEeCCCceecCcccc------cccccccCCcCCCCchhhc----------CCCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999876532111 1112346789999999875 3467889999999999999999
Q ss_pred CC-CCCCch------HHHHHHhcCCCCC-----------------------ccc-----CCCCCHHHHHHHHHhcccCcC
Q 000470 156 EV-PFFELS------HLLAYRRGQYDPS-----------------------QHL-----EKIPDSGIRKMILHMIQLEPE 200 (1472)
Q Consensus 156 g~-~pf~~~------~~~~~~~~~~~~~-----------------------~~l-----~~~~~~~l~~LI~~mL~~dP~ 200 (1472)
|. +||... ++.+......... ..+ ....+..+.++|.+||++||+
T Consensus 364 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~ 443 (501)
T PHA03210 364 HDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWH 443 (501)
T ss_pred CCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcc
Confidence 84 455321 1111111000000 000 012345678899999999999
Q ss_pred CCCCHHHHHHH
Q 000470 201 LRFSAESYLQN 211 (1472)
Q Consensus 201 ~Rpsa~elL~~ 211 (1472)
+|||+.|+|+|
T Consensus 444 ~Rpsa~elL~h 454 (501)
T PHA03210 444 LRPGAAELLAL 454 (501)
T ss_pred cCcCHHHHhhC
Confidence 99999999988
No 230
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.93 E-value=4.5e-26 Score=269.79 Aligned_cols=203 Identities=19% Similarity=0.167 Sum_probs=156.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|++|||++ |+|.+++... ..+++..++.+++|++.||+|||++||+||||||+||+++
T Consensus 56 l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~ 135 (314)
T cd08216 56 LQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS 135 (314)
T ss_pred cCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe
Confidence 589999999999999999999999999 6999998753 3589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.+.....................++..|+|||.+... ...++.++||||+||++|||++|+
T Consensus 136 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~Diws~G~il~el~~g~ 207 (314)
T cd08216 136 GDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQN--------LQGYNEKSDIYSVGITACELANGH 207 (314)
T ss_pred cCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCC--------CCCCCcchhHHHHHHHHHHHHhCC
Confidence 999999999998876533222211222223444567789999987521 234788999999999999999999
Q ss_pred CCCCchHHH----HHHhcCCC------------------------------CCcccCCCCCHHHHHHHHHhcccCcCCCC
Q 000470 158 PFFELSHLL----AYRRGQYD------------------------------PSQHLEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 158 ~pf~~~~~~----~~~~~~~~------------------------------~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
+||...... ....+... .........+..+.+|+.+||+.||++||
T Consensus 208 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 287 (314)
T cd08216 208 VPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRP 287 (314)
T ss_pred CCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCc
Confidence 888643211 11111100 00001111235788999999999999999
Q ss_pred CHHHHHHH
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~elL~~ 211 (1472)
+++|+|+|
T Consensus 288 t~~~ll~~ 295 (314)
T cd08216 288 SASQLLNH 295 (314)
T ss_pred CHHHHhcC
Confidence 99999998
No 231
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.1e-26 Score=284.26 Aligned_cols=197 Identities=20% Similarity=0.232 Sum_probs=161.7
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCc
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW 81 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~ 81 (1472)
.+=|+.++..|++++++|+||||++ |+|..++++-..+++..+++++..|+-||.-+|+.|+|||||||+|||++..|+
T Consensus 134 s~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GH 213 (1317)
T KOG0612|consen 134 SEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGH 213 (1317)
T ss_pred cHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCc
Confidence 4557888999999999999999999 699999999888999999999999999999999999999999999999999999
Q ss_pred EEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 000470 82 LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE 161 (1472)
Q Consensus 82 vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~ 161 (1472)
+||+|||.+-.... +-.....+..|||.|++||++...+.+ .+.|++.+|.||+|+++|||+.|..||.
T Consensus 214 ikLADFGsClkm~~------dG~V~s~~aVGTPDYISPEvLqs~~~~-----~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 214 IKLADFGSCLKMDA------DGTVRSSVAVGTPDYISPEVLQSQGDG-----KGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred EeeccchhHHhcCC------CCcEEeccccCCCCccCHHHHHhhcCC-----ccccCCccchhhhHHHHHHHHcCCCcch
Confidence 99999998765521 223445677899999999999755432 4789999999999999999999977776
Q ss_pred chHHHHHHhcCCC--CCcccC--CCCCHHHHHHHHHhcccCcCCCCC---HHHHHHH
Q 000470 162 LSHLLAYRRGQYD--PSQHLE--KIPDSGIRKMILHMIQLEPELRFS---AESYLQN 211 (1472)
Q Consensus 162 ~~~~~~~~~~~~~--~~~~l~--~~~~~~l~~LI~~mL~~dP~~Rps---a~elL~~ 211 (1472)
...+......... ....+| ...++.+++||.++|. +|+.|.. ++++-.|
T Consensus 283 adslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 283 ADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred HHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 5554432211111 111222 2367899999999984 5889998 9999999
No 232
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.93 E-value=6.7e-26 Score=261.60 Aligned_cols=196 Identities=20% Similarity=0.218 Sum_probs=155.3
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.. +...|+++||++ ++|.+++.....+++.+++.++.|++.||.|||++||+||||||+||+++
T Consensus 61 l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~ 140 (266)
T cd06651 61 LQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD 140 (266)
T ss_pred cCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC
Confidence 589999999999876 367899999998 59999998877799999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||+++.......... ......++..|+|||.+. +..++.++||||+||++|||++|+
T Consensus 141 ~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~i~~el~~g~ 206 (266)
T cd06651 141 SAGNVKLGDFGASKRLQTICMSGT----GIRSVTGTPYWMSPEVIS----------GEGYGRKADVWSLGCTVVEMLTEK 206 (266)
T ss_pred CCCCEEEccCCCccccccccccCC----ccccCCccccccCHHHhC----------CCCCCchhhhHHHHHHHHHHHHCC
Confidence 999999999999875422111110 112234677899999764 335688999999999999999999
Q ss_pred CCCCchH-HHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSH-LLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~-~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||.... ........ ....+.++...++.++++| +||..+|++||+++|+++|
T Consensus 207 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 207 PPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred CCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 9996443 22222211 1122344556678899999 6777899999999999998
No 233
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.93 E-value=8.2e-26 Score=258.79 Aligned_cols=194 Identities=19% Similarity=0.132 Sum_probs=156.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.+++..|+++||+. ++|.+++.. ...+++.+++.++.|++.||.|||+.||+||||+|+||+++.
T Consensus 55 l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~ 134 (256)
T cd06612 55 CDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNE 134 (256)
T ss_pred CCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECC
Confidence 489999999999999999999999999 599999865 456899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.+......... .....++..|+|||.+. +..++.++||||+||++|+|++|++
T Consensus 135 ~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~s~G~il~~l~~g~~ 197 (256)
T cd06612 135 EGQAKLADFGVSGQLTDTMAK-------RNTVIGTPFWMAPEVIQ----------EIGYNNKADIWSLGITAIEMAEGKP 197 (256)
T ss_pred CCcEEEcccccchhcccCccc-------cccccCCccccCHHHHh----------cCCCCchhhHHHHHHHHHHHHhCCC
Confidence 999999999998765322110 11233577899999764 2357889999999999999999998
Q ss_pred CCCchHHHHHHhcC---CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLAYRRGQ---YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~~~~~~---~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||............ .......+...+..+.++|.+||+.||++||++.|+++|
T Consensus 198 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 198 PYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 88644322211111 111112233456789999999999999999999999988
No 234
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=7.7e-26 Score=267.88 Aligned_cols=196 Identities=16% Similarity=0.144 Sum_probs=155.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
.||||+++++++..+...|++|||+. |+|.+++..+ ..++..++..++.||+.||.|||++||
T Consensus 76 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi 155 (314)
T cd05099 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRC 155 (314)
T ss_pred CCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 59999999999999999999999999 6999999653 247889999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||++.++.+||+|||.++....... ........++..|+|||.+. +..++.++|||
T Consensus 156 ~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Diw 220 (314)
T cd05099 156 IHRDLAARNVLVTEDNVMKIADFGLARGVHDIDY-----YKKTSNGRLPVKWMAPEALF----------DRVYTHQSDVW 220 (314)
T ss_pred eeccccceeEEEcCCCcEEEcccccccccccccc-----ccccccCCCCccccCHHHHc----------cCCcCccchhh
Confidence 9999999999999999999999999875421110 00011122345799999764 33578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 145 AVGCVIAELFL-EVPFFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||||++|||++ |..||...... ....... ....+...+..++++|.+||..||++||++.|+++.+..
T Consensus 221 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~ 292 (314)
T cd05099 221 SFGILMWEIFTLGGSPYPGIPVEELFKLLREGH--RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDK 292 (314)
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 99999999999 78888654332 2222221 112334456789999999999999999999999988654
No 235
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.93 E-value=3.9e-26 Score=272.39 Aligned_cols=200 Identities=17% Similarity=0.164 Sum_probs=155.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++++++..|+||||+. |+|.+++.. ...+++..++.++.|++.||+|||++||+||||||+|||++.
T Consensus 58 ~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~ 137 (331)
T cd05624 58 GDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM 137 (331)
T ss_pred CCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC
Confidence 479999999999999999999999998 699999986 467899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.+||+|||+++...... ........|++.|+|||++.... .....++.++||||+||++|||++|++
T Consensus 138 ~~~~kl~DfG~a~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~DiwSlGvil~ell~g~~ 206 (331)
T cd05624 138 NGHIRLADFGSCLKMNQDG------TVQSSVAVGTPDYISPEILQAME-----DGMGKYGPECDWWSLGVCMYEMLYGET 206 (331)
T ss_pred CCCEEEEeccceeeccCCC------ceeeccccCCcccCCHHHHhccc-----cCCCCCCCcccEEeeehhhhhhhhCCC
Confidence 9999999999987542211 11112346889999999875321 112357889999999999999999999
Q ss_pred CCCchHHHHH-H---hcCCCC-CcccCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHH
Q 000470 159 FFELSHLLAY-R---RGQYDP-SQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~~-~---~~~~~~-~~~l~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 211 (1472)
||........ . ...... .+......++.++++|.+||..++++ |++++++++|
T Consensus 207 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 207 PFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 9865443222 1 111111 11111234678999999999876654 4689999988
No 236
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.93 E-value=2.2e-25 Score=266.31 Aligned_cols=259 Identities=20% Similarity=0.225 Sum_probs=217.0
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCc-----------cc--------------cccccceEEec
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE-----------KD--------------ISFRSRLTYHL 1104 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e-----------~~--------------~~~~~~~t~~~ 1104 (1472)
+..++..-...|+|..|++|++.+|.|-.|.+|++|.+...+ +. ...-...++.+
T Consensus 370 c~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~G 449 (707)
T KOG0263|consen 370 CMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYG 449 (707)
T ss_pred EEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeec
Confidence 344444444679999999999999999999999999987210 00 00112345779
Q ss_pred cCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEe
Q 000470 1105 EGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYST 1184 (1472)
Q Consensus 1105 ~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at 1184 (1472)
|.++|..+.|+|+.+.|++||.|++||+|.+++-. .+.. ...|-.+|..+.|+|. |-++++|+
T Consensus 450 H~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s-------------~~V~-y~GH~~PVwdV~F~P~---GyYFatas 512 (707)
T KOG0263|consen 450 HSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWS-------------CLVI-YKGHLAPVWDVQFAPR---GYYFATAS 512 (707)
T ss_pred CCCceeeeeecccccceeeccCCcceeeeecccce-------------eEEE-ecCCCcceeeEEecCC---ceEEEecC
Confidence 99999999999999999999999999999998511 2222 2367789999999998 78999999
Q ss_pred CCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCC
Q 000470 1185 QNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPP 1264 (1472)
Q Consensus 1185 ~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~ 1264 (1472)
.|++-++|........+.+.+ |.+.|.|+.|+|+.+++++||+|.+|++||..++..++.+.. |.++|+.+.+ +|+
T Consensus 513 ~D~tArLWs~d~~~PlRifag--hlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~G-H~~~V~al~~-Sp~ 588 (707)
T KOG0263|consen 513 HDQTARLWSTDHNKPLRIFAG--HLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTG-HKGPVTALAF-SPC 588 (707)
T ss_pred CCceeeeeecccCCchhhhcc--cccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecC-CCCceEEEEE-cCC
Confidence 999999999999988888877 999999999999999999999999999999999999999975 8899999999 776
Q ss_pred CCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccccccccccc
Q 000470 1265 PNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDEL 1344 (1472)
Q Consensus 1265 ~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 1344 (1472)
+ +++++|+.+|.|.+||+.+|..+..+.
T Consensus 589 G---------r~LaSg~ed~~I~iWDl~~~~~v~~l~------------------------------------------- 616 (707)
T KOG0263|consen 589 G---------RYLASGDEDGLIKIWDLANGSLVKQLK------------------------------------------- 616 (707)
T ss_pred C---------ceEeecccCCcEEEEEcCCCcchhhhh-------------------------------------------
Confidence 5 599999999999999999987765554
Q ss_pred CCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCCCCCCc
Q 000470 1345 NEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRS 1385 (1472)
Q Consensus 1345 ~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s 1385 (1472)
+|...|.++.|+.+| .|++||.|+.|++||+......
T Consensus 617 ----~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~ 654 (707)
T KOG0263|consen 617 ----GHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIEL 654 (707)
T ss_pred ----cccCceeEEEEecCCCEEEecCCCCeEEEEEchhhccc
Confidence 233478999999988 7779999999999999876554
No 237
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.93 E-value=1.1e-26 Score=266.63 Aligned_cols=195 Identities=28% Similarity=0.292 Sum_probs=157.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||+.+ +|.+++...+.+++.++..++.||+.||.+||++||+|+||||+||+++.+
T Consensus 55 l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~ 134 (260)
T PF00069_consen 55 LRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDEN 134 (260)
T ss_dssp HTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999999999999999996 999999976779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+.... ..........++..|+|||.+. ....++.++|||||||++|+|++|..|
T Consensus 135 ~~~~l~Dfg~~~~~~-------~~~~~~~~~~~~~~y~aPE~~~---------~~~~~~~~~Di~slG~il~~l~~~~~p 198 (260)
T PF00069_consen 135 GEVKLIDFGSSVKLS-------ENNENFNPFVGTPEYMAPEVLQ---------QGKKYTRKSDIWSLGIILYELLTGKLP 198 (260)
T ss_dssp SEEEESSGTTTEEST-------STTSEBSSSSSSGGGSCHHHHT---------TTSSBSTHHHHHHHHHHHHHHHHSSSS
T ss_pred ccccccccccccccc-------cccccccccccccccccccccc---------ccccccccccccccccccccccccccc
Confidence 999999999987531 1112334556788999999764 134678999999999999999999888
Q ss_pred CCch----HHHHHHhcCCC-CCcccC--CCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELS----HLLAYRRGQYD-PSQHLE--KIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~----~~~~~~~~~~~-~~~~l~--~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|... ....+.+.... ...... ....+.++++|.+||+.||++||++.++++|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 199 FEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp STTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred cccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 8654 22222211111 000111 1113789999999999999999999999998
No 238
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.93 E-value=9.5e-26 Score=258.62 Aligned_cols=193 Identities=18% Similarity=0.197 Sum_probs=157.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|+||||++ ++|.+++..+. .+++..++.++.|++.||.|||++||+||||||+||+++
T Consensus 57 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~ 136 (256)
T cd05039 57 LRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS 136 (256)
T ss_pred cCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe
Confidence 579999999999999999999999999 69999997755 689999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
.++.++|+|||.++...... .....+..|+|||.+. ...++.++||||+||++|||++ |
T Consensus 137 ~~~~~~l~d~g~~~~~~~~~----------~~~~~~~~~~ape~~~----------~~~~~~~~Di~slG~il~~l~~~g 196 (256)
T cd05039 137 EDLVAKVSDFGLAKEASQGQ----------DSGKLPVKWTAPEALR----------EKKFSTKSDVWSFGILLWEIYSFG 196 (256)
T ss_pred CCCCEEEccccccccccccc----------ccCCCcccccCchhhc----------CCcCCcHHHHHHHHHHHHHHHhcC
Confidence 99999999999987652111 1222355799999764 3356789999999999999997 8
Q ss_pred CCCCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
..||........... ........+...++.+.++|.+||..+|++||+++|+++.+.
T Consensus 197 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 254 (256)
T cd05039 197 RVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254 (256)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHh
Confidence 888865443332211 111122334456788999999999999999999999998864
No 239
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.93 E-value=1.3e-25 Score=259.99 Aligned_cols=198 Identities=16% Similarity=0.087 Sum_probs=154.7
Q ss_pred CCCCcceeeEEEEeC------CeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000470 2 SSTPCVHKKFWQETD------KAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~------~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpe 72 (1472)
+||||+++++++... ...|++|||++ ++|.+++... ..+++..++.++.|++.||.|||++||+||||||+
T Consensus 61 ~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~ 140 (272)
T cd06637 61 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQ 140 (272)
T ss_pred CCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHH
Confidence 699999999998753 46899999999 6999998763 35899999999999999999999999999999999
Q ss_pred CEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHH
Q 000470 73 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 152 (1472)
Q Consensus 73 NILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~e 152 (1472)
||+++.++.++|+|||+++....... ......|+..|+|||.+.... .....++.++||||+||++||
T Consensus 141 nili~~~~~~~l~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slGv~l~e 208 (272)
T cd06637 141 NVLLTENAEVKLVDFGVSAQLDRTVG-------RRNTFIGTPYWMAPEVIACDE-----NPDATYDFKSDLWSLGITAIE 208 (272)
T ss_pred HEEECCCCCEEEccCCCceecccccc-------cCCcccccccccCHhHhcccc-----CcCCCCCchhhHHHHHHHHHH
Confidence 99999999999999999875421110 112345788899999875321 123467889999999999999
Q ss_pred HHhCCCCCCch-HHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 153 LFLEVPFFELS-HLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 153 Lltg~~pf~~~-~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|++|.+||... ......... ...........+..+++|+.+||..||.+||+++|+++|
T Consensus 209 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 209 MAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred HHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 99998888532 222221111 111112233456789999999999999999999999998
No 240
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.93 E-value=5.4e-26 Score=266.28 Aligned_cols=193 Identities=21% Similarity=0.252 Sum_probs=154.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.+..+...|+||||++ ++|.+++.. +.+++.++..++.||+.||.|||++||+||||||+||+++.+
T Consensus 76 l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~ 154 (292)
T cd06658 76 YHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD 154 (292)
T ss_pred CCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC
Confidence 579999999999999999999999999 588888755 458999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++........ . .....++..|+|||.+. ...++.++||||+||++|||++|+.|
T Consensus 155 ~~~kL~dfg~~~~~~~~~~---~----~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slGvil~el~~g~~p 217 (292)
T cd06658 155 GRIKLSDFGFCAQVSKEVP---K----RKSLVGTPYWMAPEVIS----------RLPYGTEVDIWSLGIMVIEMIDGEPP 217 (292)
T ss_pred CCEEEccCcchhhcccccc---c----CceeecCccccCHHHHc----------cCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999998764421111 0 12234678899999764 33567899999999999999999888
Q ss_pred CCchHHHH-HH--hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLA-YR--RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~-~~--~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|....... +. .....+........+..+++++.+||..||.+||+++|+++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 218 YFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 86433221 11 112222222223456789999999999999999999999998
No 241
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.93 E-value=8.5e-26 Score=261.30 Aligned_cols=199 Identities=11% Similarity=0.040 Sum_probs=154.4
Q ss_pred CCCCCcceeeEEEEeCCe------EEEEecccC-CcHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 000470 1 MSSTPCVHKKFWQETDKA------AYLLRQYFF-NSLRDRLST------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHG 67 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~------~~lV~Ey~~-gsL~d~l~~------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~ 67 (1472)
++||||+++++++..... .|+++||++ |+|.+++.. ...+++..+..++.|++.||.|||++||+||
T Consensus 58 l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~ 137 (273)
T cd05035 58 FDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHR 137 (273)
T ss_pred CCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 579999999998866544 899999999 699998843 2358999999999999999999999999999
Q ss_pred CCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 68 DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
||||+||++++++.+||+|||.++........ .......++..|+|||.+. ...++.++||||+|
T Consensus 138 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~SlG 202 (273)
T cd05035 138 DLAARNCMLREDMTVCVADFGLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLA----------DRVYTSKSDVWAFG 202 (273)
T ss_pred ccchheEEECCCCeEEECCccceeeccccccc-----cccccccCCccccCHhhcc----------cCCCCcccchHHHH
Confidence 99999999999999999999998765322110 0111223356799999763 34578899999999
Q ss_pred HHHHHHHh-CCCCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 148 CVIAELFL-EVPFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 148 ~il~eLlt-g~~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
|++|||++ |.+||.......... .........+...+..+.+++.+||+.||++||++.|+++++..
T Consensus 203 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 203 VTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 99999999 788886543222211 11111223445567889999999999999999999999998653
No 242
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.93 E-value=8.9e-26 Score=262.49 Aligned_cols=195 Identities=15% Similarity=0.131 Sum_probs=154.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++... ..++++||++ |+|.+++..+ +.+++.++..++.|++.||+|||++||+||||||+|||++.
T Consensus 66 ~~~~~i~~~~~~~~~~-~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~ 144 (279)
T cd05109 66 VGSPYVCRLLGICLTS-TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKS 144 (279)
T ss_pred cCCCCCceEEEEEcCC-CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 4799999999988754 5789999999 7999999764 56899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.+||+|||+++....... ........++..|+|||.+. ...++.++|||||||++|||++ |.
T Consensus 145 ~~~~kL~dfG~~~~~~~~~~-----~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~el~t~g~ 209 (279)
T cd05109 145 PNHVKITDFGLARLLDIDET-----EYHADGGKVPIKWMALESIL----------HRRFTHQSDVWSYGVTVWELMTFGA 209 (279)
T ss_pred CCcEEECCCCceeecccccc-----eeecCCCccchhhCCHHHhc----------cCCCCchhHHHHHHHHHHHHHcCCC
Confidence 99999999999876532211 11112223456799999764 3357889999999999999998 78
Q ss_pred CCCCchHHH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+||...... ........ ...+...+..+.++|.+||..||++||++.++++.+.
T Consensus 210 ~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~ 266 (279)
T cd05109 210 KPYDGIPAREIPDLLEKGER--LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFS 266 (279)
T ss_pred CCCCCCCHHHHHHHHHCCCc--CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 898653322 22222111 1223446678999999999999999999999998754
No 243
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.93 E-value=1.2e-25 Score=263.43 Aligned_cols=199 Identities=19% Similarity=0.141 Sum_probs=156.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++.+..+...|+||||++ ++|..++.. ...+++.++..++.||+.||.|||++||+||||||+||+++.
T Consensus 66 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~ 145 (292)
T cd06644 66 CNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTL 145 (292)
T ss_pred CCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcC
Confidence 589999999999999999999999999 588877754 456899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.+........ ......++..|+|||.+.... .....++.++|+|||||++|||++|.+
T Consensus 146 ~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slG~il~el~~g~~ 213 (292)
T cd06644 146 DGDIKLADFGVSAKNVKTLQ-------RRDSFIGTPYWMAPEVVMCET-----MKDTPYDYKADIWSLGITLIEMAQIEP 213 (292)
T ss_pred CCCEEEccCccceecccccc-------ccceecCCccccCceeecccc-----ccCCCCCchhhhHhHHHHHHHHhcCCC
Confidence 99999999998764321110 012234577899999875321 123457889999999999999999998
Q ss_pred CCCchHHH-HHHhcC--CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLL-AYRRGQ--YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~-~~~~~~--~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||...... .+.+.. ..+....+...+..+.++|.+||+.||++||+++++++|
T Consensus 214 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 214 PHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 88643322 121111 111222334456789999999999999999999999988
No 244
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.93 E-value=7.2e-25 Score=246.76 Aligned_cols=289 Identities=17% Similarity=0.235 Sum_probs=230.5
Q ss_pred eeccccccceeEEEEcCCCC-EEEEEeCCCCEEEEeCCC----CccccccccceEEecc----CCceEEEEEecCCCEEE
Q 000470 1052 AHLQEHCSAVNEIAISHDHS-FFVSASDDSTVKVWDSRK----LEKDISFRSRLTYHLE----GSRALCTMMLRHSAQVV 1122 (1472)
Q Consensus 1052 ~~l~~H~~~V~~lafspd~~-~laSgS~DGtVkvWD~~~----~e~~~~~~~~~t~~~~----~~~I~~v~f~~~~~~la 1122 (1472)
..+. |+..|.+.+|+|-.. .+++|+.|-+.++|++.. ++....+|....+.++ ...|++++|+.+|..||
T Consensus 173 kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~La 251 (524)
T KOG0273|consen 173 KVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLA 251 (524)
T ss_pred eecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEE
Confidence 3444 999999999999665 999999999999999874 1121223332222222 24699999999999999
Q ss_pred EEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccce
Q 000470 1123 VGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWT 1202 (1472)
Q Consensus 1123 s~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~ 1202 (1472)
+|+.||.+++|+.+. . +......|..+|..+.|+-. |.+|++++.||++.+||..+++....
T Consensus 252 tG~~~G~~riw~~~G------~---------l~~tl~~HkgPI~slKWnk~---G~yilS~~vD~ttilwd~~~g~~~q~ 313 (524)
T KOG0273|consen 252 TGSEDGEARIWNKDG------N---------LISTLGQHKGPIFSLKWNKK---GTYILSGGVDGTTILWDAHTGTVKQQ 313 (524)
T ss_pred EeecCcEEEEEecCc------h---------hhhhhhccCCceEEEEEcCC---CCEEEeccCCccEEEEeccCceEEEe
Confidence 999999999999872 1 11122356778888999988 78999999999999999999988877
Q ss_pred eecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEc
Q 000470 1203 LKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG 1282 (1472)
Q Consensus 1203 l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~ 1282 (1472)
+.. |..+-..+.|-. ..-+++.+.||.|+++-+.-..+++++.. |..+|..+.| .|.+. ++++++.
T Consensus 314 f~~--~s~~~lDVdW~~-~~~F~ts~td~~i~V~kv~~~~P~~t~~G-H~g~V~alk~-n~tg~---------LLaS~Sd 379 (524)
T KOG0273|consen 314 FEF--HSAPALDVDWQS-NDEFATSSTDGCIHVCKVGEDRPVKTFIG-HHGEVNALKW-NPTGS---------LLASCSD 379 (524)
T ss_pred eee--ccCCccceEEec-CceEeecCCCceEEEEEecCCCcceeeec-ccCceEEEEE-CCCCc---------eEEEecC
Confidence 765 555546677753 45788999999999999999999999998 8889999999 77655 8999999
Q ss_pred CCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCC
Q 000470 1283 CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG 1362 (1472)
Q Consensus 1283 dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~ 1362 (1472)
|+++++|......|..-+..+ ...|+.+.|+|.
T Consensus 380 D~TlkiWs~~~~~~~~~l~~H-----------------------------------------------skei~t~~wsp~ 412 (524)
T KOG0273|consen 380 DGTLKIWSMGQSNSVHDLQAH-----------------------------------------------SKEIYTIKWSPT 412 (524)
T ss_pred CCeeEeeecCCCcchhhhhhh-----------------------------------------------ccceeeEeecCC
Confidence 999999998877665555432 225666777665
Q ss_pred C----------cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHh
Q 000470 1363 G----------DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLA 1432 (1472)
Q Consensus 1363 g----------~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 1432 (1472)
| .+++++.|++|++||+..+...+.+.
T Consensus 413 g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~------------------------------------------- 449 (524)
T KOG0273|consen 413 GPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLM------------------------------------------- 449 (524)
T ss_pred CCccCCCcCCceEEEeecCCeEEEEEccCCceeEeec-------------------------------------------
Confidence 4 58899999999999998876654432
Q ss_pred hhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1433 AAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1433 ~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.|++.|.+|+ |+++|++++||+.||.|.||.
T Consensus 450 --------kH~~pVysva-fS~~g~ylAsGs~dg~V~iws 480 (524)
T KOG0273|consen 450 --------KHQEPVYSVA-FSPNGRYLASGSLDGCVHIWS 480 (524)
T ss_pred --------cCCCceEEEE-ecCCCcEEEecCCCCeeEecc
Confidence 2999999996 999999999999999999994
No 245
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.93 E-value=7.2e-26 Score=263.33 Aligned_cols=199 Identities=18% Similarity=0.148 Sum_probs=158.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ ++|.+++.. ...+++.+++.++.|++.||.|||++||+||||||+||+++.
T Consensus 59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~ 138 (280)
T cd06611 59 CKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTL 138 (280)
T ss_pred CCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECC
Confidence 579999999999999999999999999 599999876 346999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.+........ ......++..|+|||.+.... .....++.++|+||+||++|||++|++
T Consensus 139 ~~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~-----~~~~~~~~~sDi~slG~il~~l~~g~~ 206 (280)
T cd06611 139 DGDVKLADFGVSAKNKSTLQ-------KRDTFIGTPYWMAPEVVACET-----FKDNPYDYKADIWSLGITLIELAQMEP 206 (280)
T ss_pred CCCEEEccCccchhhccccc-------ccceeecchhhcCHHHHhhcc-----cCCCCCCccccHHHHHHHHHHHHhCCC
Confidence 99999999998764321111 012234678899999875321 123467889999999999999999999
Q ss_pred CCCchHHHH-HHhcCCC--CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLA-YRRGQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~-~~~~~~~--~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||....... +...... +....+...+..+.++|.+||+.||.+||+++++++|
T Consensus 207 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 207 PHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 996543222 1111111 1112234556789999999999999999999999988
No 246
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=7.6e-26 Score=267.03 Aligned_cols=199 Identities=17% Similarity=0.153 Sum_probs=157.0
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
+||||+++++++..+...|+||||++ |+|.+++..+. .++..++..++.|++.||+|||++|+
T Consensus 82 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi 161 (307)
T cd05098 82 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKC 161 (307)
T ss_pred CCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 69999999999999999999999999 69999997532 47889999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+||+++.++.++|+|||.++....... ........++..|+|||.+. +..++.++|||
T Consensus 162 ~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dvw 226 (307)
T cd05098 162 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-----YKKTTNGRLPVKWMAPEALF----------DRIYTHQSDVW 226 (307)
T ss_pred ccccccHHheEEcCCCcEEECCCcccccccccch-----hhccccCCCccceeChHHhc----------cCCCCcHHHHH
Confidence 9999999999999999999999998875421110 00001122345799999764 34578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcc
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 215 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 215 (1472)
|+||++|||++ |.+||........... ........+...+..+.+||.+||..+|++||++.++++++...
T Consensus 227 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 227 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred HHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 99999999998 7888875544332211 11112233445677899999999999999999999999986543
No 247
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.93 E-value=1.1e-25 Score=264.13 Aligned_cols=193 Identities=19% Similarity=0.174 Sum_probs=155.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.+..+...|+||||++ ++|.+++... .+++.++..++.|++.||.|||++||+||||||+||+++.+
T Consensus 74 ~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~ 152 (296)
T cd06654 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD 152 (296)
T ss_pred CCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC
Confidence 479999999999999999999999999 6999998754 48999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+........ ......+++.|+|||.+. ...++.++||||+||++|+|++|++|
T Consensus 153 ~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~s~Gvil~~l~~g~~p 215 (296)
T cd06654 153 GSVKLTDFGFCAQITPEQS-------KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMIEGEPP 215 (296)
T ss_pred CCEEECccccchhcccccc-------ccCcccCCccccCHHHHc----------CCCCCccchHHHHHHHHHHHHhCCCC
Confidence 9999999998775421111 112234678899999764 23567899999999999999999999
Q ss_pred CCchHHHH-H-Hh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLA-Y-RR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~-~-~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|....... . .. ....+....+...+..+.++|.+||..||++||+++++++|
T Consensus 216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 216 YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 86543211 1 11 11111212334456789999999999999999999999987
No 248
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.93 E-value=9.1e-26 Score=264.64 Aligned_cols=198 Identities=14% Similarity=0.084 Sum_probs=156.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-----------FLSLVEKKWLAFQLLLAVKQCHEKGICHGD 68 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-----------~l~~~~~~~i~~Qll~aL~~LH~~gIvH~D 68 (1472)
++||||+++++++..+...|++|||+. ++|.+++.... .+++..++.++.|++.||.|||++||+|||
T Consensus 76 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~d 155 (296)
T cd05051 76 LSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRD 155 (296)
T ss_pred cCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 579999999999999999999999999 69999997654 689999999999999999999999999999
Q ss_pred CCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHH
Q 000470 69 IKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGC 148 (1472)
Q Consensus 69 LKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~ 148 (1472)
|||+||+++.++.++|+|||.++...... .........++..|+|||.+. ...++.++|||||||
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~ 220 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSD-----YYRVQGRAPLPIRWMAWESVL----------LGKFTTKSDVWAFGV 220 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCc-----ceeecCcCCCCceecCHHHhh----------cCCCCccchhhhhHH
Confidence 99999999999999999999887543221 111122334567899999764 235788999999999
Q ss_pred HHHHHHh--CCCCCCchHHHHH-H--hcC-----CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 149 VIAELFL--EVPFFELSHLLAY-R--RGQ-----YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 149 il~eLlt--g~~pf~~~~~~~~-~--~~~-----~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
++|||++ +.+||........ . ... .......+...+.++.+++.+||+.||++||++.|+++.+.
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 221 TLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 9999998 5777754322111 1 111 11111223345678999999999999999999999998753
No 249
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.93 E-value=9.7e-26 Score=259.16 Aligned_cols=197 Identities=20% Similarity=0.167 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|++|||++ ++|.+++... ..+++.++..++.|++.||.|||++||+||||||+||+++.
T Consensus 57 ~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~ 136 (262)
T cd06613 57 CRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTE 136 (262)
T ss_pred CCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECC
Confidence 589999999999999999999999999 5999998765 67999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.+........ ......++..|+|||.+... ....++.++|+||+||++|||++|.+
T Consensus 137 ~~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~y~~Pe~~~~~-------~~~~~~~~~Di~slG~~l~~~~tg~~ 202 (262)
T cd06613 137 DGDVKLADFGVSAQLTATIA-------KRKSFIGTPYWMAPEVAAVE-------RKGGYDGKCDIWALGITAIELAELQP 202 (262)
T ss_pred CCCEEECccccchhhhhhhh-------ccccccCCccccCchhhccc-------ccCCcCchhhhHHHHHHHHHHHhCCC
Confidence 99999999998765422110 01223467789999987522 11367889999999999999999988
Q ss_pred CCCchH----HHHHHhcCCCCCc-ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSH----LLAYRRGQYDPSQ-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~----~~~~~~~~~~~~~-~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||.... ........+.+.. ......+.+++++|.+||..||.+||++.+++.|
T Consensus 203 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 203 PMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred CCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 885432 2222233222211 1222345679999999999999999999999987
No 250
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.93 E-value=1.2e-25 Score=264.76 Aligned_cols=196 Identities=15% Similarity=0.169 Sum_probs=156.5
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
+||||+++++++...+..|++|||+. |+|.+++... ..+++.++..++.|++.||+|||++||+|+||||+|||++.
T Consensus 97 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~ 176 (302)
T cd05055 97 NHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTH 176 (302)
T ss_pred CCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcC
Confidence 69999999999999999999999999 7999999753 23899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.++....... ........++..|+|||.+. ...++.++||||+||++|||++ |.
T Consensus 177 ~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslGvil~el~t~g~ 241 (302)
T cd05055 177 GKIVKICDFGLARDIMNDSN-----YVVKGNARLPVKWMAPESIF----------NCVYTFESDVWSYGILLWEIFSLGS 241 (302)
T ss_pred CCeEEECCCcccccccCCCc-----eeecCCCCcccccCCHhhhc----------cCCCCcHhHHHHHHHHHHHHHhCCC
Confidence 99999999999875422110 11122334567899999764 3357889999999999999998 88
Q ss_pred CCCCchHH----HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 158 PFFELSHL----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~pf~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
+||..... .+....... ...+...++.+++++.+||..+|++||++.|+++.+..
T Consensus 242 ~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 242 NPYPGMPVDSKFYKLIKEGYR--MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CCcCCCCchHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 88854321 122222211 12334456789999999999999999999999988643
No 251
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.93 E-value=1.6e-25 Score=258.75 Aligned_cols=203 Identities=20% Similarity=0.162 Sum_probs=153.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++.+......|+||||++ |+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 52 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil 131 (268)
T cd05086 52 LQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCF 131 (268)
T ss_pred cCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEE
Confidence 579999999999999999999999999 6999999753 33667788899999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||++...... ..........++..|+|||.+...... .....++.++|||||||++|||++
T Consensus 132 ~~~~~~~~l~Dfg~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~~~~~~~~DiwslG~~l~el~~ 203 (268)
T cd05086 132 LTSDLTVKVGDYGIGPSRYKE-----DYIETEDDKCVPLRWLAPELVGEFHGG---LITAEQTKPSNVWALGVTLWELFE 203 (268)
T ss_pred EcCCccEEecccccccccCcc-----hhhhcccCCcCcccccCchhcccccCc---cccCCCCCcchhHHHHHHHHHHHh
Confidence 999999999999987532111 000111234567889999987532211 123356889999999999999997
Q ss_pred C-CCCCCchHHH-HHH---hc-CCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 156 E-VPFFELSHLL-AYR---RG-QYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 156 g-~~pf~~~~~~-~~~---~~-~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+ .+||...... .+. +. ... +.+.+....++.+.+++..|+ .+|++||+++|+++.+
T Consensus 204 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 204 NAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred CCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 5 7788533221 111 11 111 223344456778999999999 6799999999998764
No 252
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.93 E-value=1.1e-25 Score=257.89 Aligned_cols=192 Identities=24% Similarity=0.335 Sum_probs=158.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.++...+++|||++ ++|.+++..+ ..+++.++..++.|++.||.|||+.|++||||||+||+++
T Consensus 56 ~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~ 135 (256)
T cd08221 56 LQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT 135 (256)
T ss_pred CCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe
Confidence 579999999999999999999999999 6999999764 4589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.+||+|||.++....... ......+++.|+|||.+. +..++.++|+||+||++|||++|.
T Consensus 136 ~~~~~kl~d~~~~~~~~~~~~-------~~~~~~~~~~y~ape~~~----------~~~~~~~~Dv~slG~i~~~l~~g~ 198 (256)
T cd08221 136 KAGLIKLGDFGISKILGSEYS-------MAETVVGTPYYMSPELCQ----------GVKYNFKSDIWALGCVLYELLTLK 198 (256)
T ss_pred CCCCEEECcCcceEEcccccc-------cccccCCCccccCHhhcC----------CCCCCCcchhHHHHHHHHHHHHCC
Confidence 999999999998875422111 123345788999999764 234678899999999999999999
Q ss_pred CCCCchHHHHH----HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 158 PFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 158 ~pf~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
.||........ ..+... ..+...+..+.++|.+||..+|++||+++++++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 199 RTFDATNPLNLVVKIVQGNYT---PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CCCCCCCHHHHHHHHHcCCCC---CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 89876543332 222222 12345567899999999999999999999999883
No 253
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.93 E-value=7.7e-26 Score=262.80 Aligned_cols=193 Identities=20% Similarity=0.211 Sum_probs=157.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||++++++++.++..|+||||++ ++|.+++.... .+++.+++.++.|++.||.|||++|++||||||+||+++
T Consensus 50 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~ 129 (277)
T cd05577 50 VSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLD 129 (277)
T ss_pred CCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC
Confidence 579999999999999999999999999 69999997654 689999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.+...... .......++..|+|||.+. +..++.++||||+||++|+|++|+
T Consensus 130 ~~~~~~l~dfg~~~~~~~~--------~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~il~~l~~g~ 191 (277)
T cd05577 130 DHGNVRISDLGLAVELKGG--------KKIKGRAGTPGYMAPEVLQ----------GEVYDFSVDWFALGCTLYEMIAGR 191 (277)
T ss_pred CCCCEEEccCcchhhhccC--------CccccccCCCCcCCHHHhc----------CCCCCchhhhHHHHHHHHHHhhCC
Confidence 9999999999987654211 0112334577899999764 234788999999999999999999
Q ss_pred CCCCchH----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 158 PFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
.||.... ...............+...++.++++|.+||+.||++|| ++.++++|
T Consensus 192 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 192 SPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred CCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 9986432 222333323223334555678999999999999999999 88889987
No 254
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.93 E-value=7.3e-26 Score=265.82 Aligned_cols=195 Identities=20% Similarity=0.275 Sum_probs=155.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.++...|+||||+.|+|.+++.... .+++.+++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 59 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~ 138 (298)
T cd07841 59 LKHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASD 138 (298)
T ss_pred cCCCCChhhhheeecCCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCC
Confidence 57999999999999999999999999889999998765 79999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||+++........ .....+++.|+|||.+.. ...++.++||||+||++|||++|.++
T Consensus 139 ~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~e~~~g~~~ 202 (298)
T cd07841 139 GVLKLADFGLARSFGSPNRK-------MTHQVVTRWYRAPELLFG---------ARHYGVGVDMWSVGCIFAELLLRVPF 202 (298)
T ss_pred CCEEEccceeeeeccCCCcc-------ccccccceeeeCHHHHhC---------CCCCCcHHHHHHHHHHHHHHHcCCcc
Confidence 99999999998765332211 112234677999997742 23568899999999999999999888
Q ss_pred CCchHHH----HHHhcCCCC------------------------CcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLL----AYRRGQYDP------------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~----~~~~~~~~~------------------------~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...... ........+ ........+..+.++|.+||+.||++||++.|+++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 203 LPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 8643211 111100000 000112335689999999999999999999999998
No 255
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.93 E-value=1.2e-25 Score=260.24 Aligned_cols=197 Identities=13% Similarity=0.068 Sum_probs=151.4
Q ss_pred CCCCCcceeeEEEEeC------CeEEEEecccC-CcHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFF-NSLRDRLST------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHG 67 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~------~~~~lV~Ey~~-gsL~d~l~~------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~ 67 (1472)
++||||+++++++... ...+++|||+. |+|.+++.. ...+++..+..++.||+.||+|||++||+||
T Consensus 57 l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 136 (272)
T cd05075 57 FDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHR 136 (272)
T ss_pred CCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 5899999999876432 25789999999 799988732 2348899999999999999999999999999
Q ss_pred CCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 68 DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
||||+|||++.++.++|+|||.++....... ........+++.|+|||.+. ...++.++||||||
T Consensus 137 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~----------~~~~~~~~Di~slG 201 (272)
T cd05075 137 DLAARNCMLNENMNVCVADFGLSKKIYNGDY-----YRQGRIAKMPVKWIAIESLA----------DRVYTTKSDVWSFG 201 (272)
T ss_pred ccchhheEEcCCCCEEECCCCcccccCcccc-----eecCCcccCCcccCCHHHcc----------CCCcChHHHHHHHH
Confidence 9999999999999999999999876532111 00112223466799999764 34678899999999
Q ss_pred HHHHHHHh-CCCCCCchHHH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 148 CVIAELFL-EVPFFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 148 ~il~eLlt-g~~pf~~~~~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
|++|||++ |.+||...... .+..... ....+...+..++++|.+||+.||++|||++++++++..
T Consensus 202 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 202 VTMWEIATRGQTPYPGVENSEIYDYLRQGN--RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred HHHHHHHcCCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 99999999 68888643322 2222111 112233456789999999999999999999999998653
No 256
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.93 E-value=7.9e-26 Score=270.27 Aligned_cols=196 Identities=16% Similarity=0.183 Sum_probs=153.6
Q ss_pred CCCCcceeeEEEEe-CCeEEEEecccC-CcHHHHHhCC------------------------------------------
Q 000470 2 SSTPCVHKKFWQET-DKAAYLLRQYFF-NSLRDRLSTP------------------------------------------ 37 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~-~~~~~lV~Ey~~-gsL~d~l~~~------------------------------------------ 37 (1472)
+||||+++++++.. +..+|++|||++ ++|.+++...
T Consensus 69 ~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (337)
T cd05054 69 HHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFI 148 (337)
T ss_pred cCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccc
Confidence 69999999998765 467899999999 6999998532
Q ss_pred -------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEEeccccccccCCCC
Q 000470 38 -------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 98 (1472)
Q Consensus 38 -------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~ 98 (1472)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~ 228 (337)
T cd05054 149 EDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD 228 (337)
T ss_pred cCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc
Confidence 1478899999999999999999999999999999999999999999999999876522110
Q ss_pred CCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCchH----HHHHHhcCC
Q 000470 99 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----LLAYRRGQY 173 (1472)
Q Consensus 99 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~----~~~~~~~~~ 173 (1472)
........++..|+|||.+. +..++.++||||+||++|||++ |.+||.... +........
T Consensus 229 -----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~ 293 (337)
T cd05054 229 -----YVRKGDARLPLKWMAPESIF----------DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGT 293 (337)
T ss_pred -----hhhccCCCCCccccCcHHhc----------CCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccC
Confidence 11112334456799999764 3468889999999999999998 898986422 111111111
Q ss_pred CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 174 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 174 ~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
....+...++++.+++.+||+.+|++||+++|+++++..
T Consensus 294 --~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~ 332 (337)
T cd05054 294 --RMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGD 332 (337)
T ss_pred --CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 112334556789999999999999999999999999764
No 257
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.93 E-value=8.4e-26 Score=260.71 Aligned_cols=198 Identities=21% Similarity=0.241 Sum_probs=158.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++......++|+||++ ++|.+++...+.+++..+..++.||+.||.|||++|++|+||||+||+++.+
T Consensus 60 l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~ 139 (268)
T cd06630 60 LNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDST 139 (268)
T ss_pred cCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence 579999999999999999999999999 5999999887779999999999999999999999999999999999999877
Q ss_pred C-cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 80 N-WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 80 ~-~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
+ .++|+|||.+.......... ..+.....++..|+|||.+. +..++.++|+||+||++|+|++|.+
T Consensus 140 ~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~~~~~~PE~~~----------~~~~~~~~Dv~slG~~l~~l~~g~~ 206 (268)
T cd06630 140 GQRLRIADFGAAARLAAKGTGA---GEFQGQLLGTIAFMAPEVLR----------GEQYGRSCDVWSVGCVIIEMATAKP 206 (268)
T ss_pred CCEEEEcccccccccccccccC---CccccccccccceeCHhHhc----------cCCCCcccchHHHHHHHHHHHhCCC
Confidence 6 69999999987553321111 11122345678899999764 2356789999999999999999998
Q ss_pred CCCchHH----HHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHL----LAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~----~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||..... ..+ ...........+...++.+.+++.+||..+|++||++.++++|
T Consensus 207 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 207 PWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred CCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 8863321 111 1111122233455567889999999999999999999999998
No 258
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.93 E-value=8.6e-26 Score=263.28 Aligned_cols=196 Identities=22% Similarity=0.271 Sum_probs=155.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||+.++|.+++.. ...+++.+++.++.||+.||+|||++||+|+||||+||+++.+
T Consensus 56 ~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~ 135 (286)
T cd07832 56 CQHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISAD 135 (286)
T ss_pred CCCCCCcceeeEEecCCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCC
Confidence 579999999999999999999999997799999865 4568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+.....+.. .......++..|+|||.+.. ...++.++||||+||++|||++|.++
T Consensus 136 ~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~tg~~~ 200 (286)
T cd07832 136 GVLKIADFGLARLFSEEEP------RLYSHQVATRWYRAPELLYG---------ARKYDPGVDLWAVGCIFAELLNGSPL 200 (286)
T ss_pred CcEEEeeeeecccccCCCC------CccccccCcccccCceeeec---------cccCCchhHHHHHHHHHHHHHcCCcC
Confidence 9999999998876533211 11223457888999997742 23468899999999999999999888
Q ss_pred CCchHHHH----HHh---------------------cCCCCC-----cccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 160 FELSHLLA----YRR---------------------GQYDPS-----QHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 160 f~~~~~~~----~~~---------------------~~~~~~-----~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
|....... ... ..+... .......+..+.+||.+||..||++||++++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l 280 (286)
T cd07832 201 FPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEAL 280 (286)
T ss_pred cCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHh
Confidence 85432111 000 000000 001122357899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 281 ~h 282 (286)
T cd07832 281 RH 282 (286)
T ss_pred hC
Confidence 98
No 259
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.93 E-value=1.2e-25 Score=263.14 Aligned_cols=195 Identities=24% Similarity=0.361 Sum_probs=152.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.++...|+||||+.++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 60 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~ 139 (291)
T cd07844 60 LKHANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISER 139 (291)
T ss_pred CCCcceeeEEEEEecCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCC
Confidence 5799999999999999999999999999999998753 468999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++....+... .....++..|+|||.+.. ...++.++||||+||++|+|++|.+|
T Consensus 140 ~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Dv~slG~il~~l~~g~~~ 203 (291)
T cd07844 140 GELKLADFGLARAKSVPSKT-------YSNEVVTLWYRPPDVLLG---------STEYSTSLDMWGVGCIFYEMATGRPL 203 (291)
T ss_pred CCEEECccccccccCCCCcc-------ccccccccccCCcHHhhc---------CcccCcHHHHHHHHHHHHHHHhCCCC
Confidence 99999999988754322111 112234678999997642 23467899999999999999999999
Q ss_pred CCchH-----HHHHHhcCCC------------------------CCc--ccCCCCC--HHHHHHHHHhcccCcCCCCCHH
Q 000470 160 FELSH-----LLAYRRGQYD------------------------PSQ--HLEKIPD--SGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 160 f~~~~-----~~~~~~~~~~------------------------~~~--~l~~~~~--~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
|.... ...+.+.... ... ......+ ..+.++|.+||+.||++||++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~ 283 (291)
T cd07844 204 FPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAA 283 (291)
T ss_pred CCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHH
Confidence 95332 1111000000 000 0001122 6788999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
|+++|
T Consensus 284 e~l~~ 288 (291)
T cd07844 284 EAMKH 288 (291)
T ss_pred HHhcC
Confidence 99988
No 260
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.93 E-value=2.1e-24 Score=230.36 Aligned_cols=260 Identities=18% Similarity=0.263 Sum_probs=216.5
Q ss_pred Ccc-cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEE
Q 000470 1043 GWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1121 (1472)
Q Consensus 1043 ~W~-p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~l 1121 (1472)
.|+ .++.-++.+.-....|-.++|+|.|+++|+|+-|..+.|+++...+.....+-...+.+|.+.+.|+.|.+ ..+|
T Consensus 81 vWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~i 159 (343)
T KOG0286|consen 81 VWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHI 159 (343)
T ss_pred EEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCce
Confidence 587 35666777777789999999999999999999999999999986644444455567889999999999987 5678
Q ss_pred EEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccc
Q 000470 1122 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW 1201 (1472)
Q Consensus 1122 as~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~ 1201 (1472)
+++|.|.+.-+||+++.. .+..+. .|..-|..+.+.|.+ ++.+++|+-|+..++||+|.+.+.+
T Consensus 160 lT~SGD~TCalWDie~g~-------------~~~~f~-GH~gDV~slsl~p~~--~ntFvSg~cD~~aklWD~R~~~c~q 223 (343)
T KOG0286|consen 160 LTGSGDMTCALWDIETGQ-------------QTQVFH-GHTGDVMSLSLSPSD--GNTFVSGGCDKSAKLWDVRSGQCVQ 223 (343)
T ss_pred EecCCCceEEEEEcccce-------------EEEEec-CCcccEEEEecCCCC--CCeEEecccccceeeeeccCcceeE
Confidence 899999999999998421 223333 444456677788853 6799999999999999999999999
Q ss_pred eeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccc-cCCceeEEeecCCCCCccccCCCCEEEEE
Q 000470 1202 TLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ-VCPIEKMCLFVPPPNAAVSTTARPLIYVA 1280 (1472)
Q Consensus 1202 ~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~-~~~I~~l~~~~p~~~~~~~~~~~~~l~va 1280 (1472)
++.+ |.+.|++++|.|+|.-+++|+.|++.++||+|....+..+.+.. ..+|+++.| +- .|+++++|
T Consensus 224 tF~g--hesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~F-S~---------SGRlLfag 291 (343)
T KOG0286|consen 224 TFEG--HESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAF-SK---------SGRLLFAG 291 (343)
T ss_pred eecc--cccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEE-cc---------cccEEEee
Confidence 9987 99999999999999999999999999999999988888877543 457888887 43 36699999
Q ss_pred EcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccC
Q 000470 1281 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1360 (1472)
Q Consensus 1281 s~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~ 1360 (1472)
..|..+.|||.-+++...++. +|...|.|+..+
T Consensus 292 y~d~~c~vWDtlk~e~vg~L~-----------------------------------------------GHeNRvScl~~s 324 (343)
T KOG0286|consen 292 YDDFTCNVWDTLKGERVGVLA-----------------------------------------------GHENRVSCLGVS 324 (343)
T ss_pred ecCCceeEeeccccceEEEee-----------------------------------------------ccCCeeEEEEEC
Confidence 999999999998888777765 344479999999
Q ss_pred CCC-cEEEccCCCeEEEEe
Q 000470 1361 PGG-DLLTGGTDLKIRRWD 1378 (1472)
Q Consensus 1361 p~g-~llTgg~Dg~IrlWD 1378 (1472)
|+| .+.||++|..+|+|.
T Consensus 325 ~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 325 PDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred CCCcEEEecchhHheeecC
Confidence 999 566999999999994
No 261
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.93 E-value=1.2e-25 Score=262.14 Aligned_cols=199 Identities=17% Similarity=0.144 Sum_probs=154.9
Q ss_pred CCCCcceeeEEEE-----eCCeEEEEecccC-CcHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000470 2 SSTPCVHKKFWQE-----TDKAAYLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 2 ~HpNIv~~~~~~~-----~~~~~~lV~Ey~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKp 71 (1472)
+||||+++++++. .+...|+||||++ ++|.+++. ....+++..++.++.|++.||.|||+++|+||||||
T Consensus 73 ~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp 152 (286)
T cd06638 73 DHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKG 152 (286)
T ss_pred cCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCH
Confidence 6999999999873 4467999999998 69998875 235688999999999999999999999999999999
Q ss_pred CCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 72 eNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
+||+++.++.++|+|||.++...... .......|++.|+|||.+.... .....++.++||||+||++|
T Consensus 153 ~nili~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slGvi~~ 220 (286)
T cd06638 153 NNILLTTEGGVKLVDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQ-----QLDSTYDARCDVWSLGITAI 220 (286)
T ss_pred HhEEECCCCCEEEccCCceeecccCC-------CccccccCCCcccChhhhchhh-----hccccccchhhhhhHHHHHH
Confidence 99999999999999999987542111 0113345788999999875221 12345788999999999999
Q ss_pred HHHhCCCCCCchHH-HHHHhcCCC--CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 152 ELFLEVPFFELSHL-LAYRRGQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 152 eLltg~~pf~~~~~-~~~~~~~~~--~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
||++|++||..... ..+...... +....+...+..++++|.+||+.||++||++.|+++|.
T Consensus 221 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 221 ELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred HHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 99999888754332 222221111 12223444567899999999999999999999999983
No 262
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.93 E-value=1e-25 Score=258.96 Aligned_cols=190 Identities=22% Similarity=0.249 Sum_probs=156.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+|+||++ ++|.+++.....+++.++..++.||+.||.|||+.|++||||||+||+++.+
T Consensus 54 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~ 133 (260)
T cd05611 54 GESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQT 133 (260)
T ss_pred CCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC
Confidence 379999999999999999999999998 6999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++.... .....++..|+|||.+. +..++.++||||+|+++|+|++|.+|
T Consensus 134 ~~~~l~dfg~~~~~~~-----------~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p 192 (260)
T cd05611 134 GHLKLTDFGLSRNGLE-----------NKKFVGTPDYLAPETIL----------GVGDDKMSDWWSLGCVIFEFLFGYPP 192 (260)
T ss_pred CcEEEeecccceeccc-----------cccCCCCcCccChhhhc----------CCCCcchhhhHHHHHHHHHHHHCCCC
Confidence 9999999998765321 11233567799999764 22468899999999999999999999
Q ss_pred CCchHHHHH----HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH---HHHHHH
Q 000470 160 FELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA---ESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa---~elL~~ 211 (1472)
|........ ...............++.+.++|.+||+.||++||++ +|++.|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 193 FHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH 251 (260)
T ss_pred CCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence 965443322 2222222223344567889999999999999999955 788877
No 263
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.93 E-value=1.3e-25 Score=258.18 Aligned_cols=196 Identities=16% Similarity=0.139 Sum_probs=157.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++......|+||||++ ++|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+++
T Consensus 59 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~ 138 (261)
T cd05148 59 LRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG 138 (261)
T ss_pred CCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc
Confidence 589999999999999999999999999 5999999763 3589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
.++.++|+|||.+...... ........++..|+|||.+. ...++.++|||||||++|+|++ |
T Consensus 139 ~~~~~kl~d~g~~~~~~~~-------~~~~~~~~~~~~~~~PE~~~----------~~~~~~~~DiwslG~~l~~l~~~g 201 (261)
T cd05148 139 EDLVCKVADFGLARLIKED-------VYLSSDKKIPYKWTAPEAAS----------HGTFSTKSDVWSFGILLYEMFTYG 201 (261)
T ss_pred CCceEEEccccchhhcCCc-------cccccCCCCceEecCHHHHc----------cCCCCchhhHHHHHHHHHHHHcCC
Confidence 9999999999988654211 11112333566799999764 3357789999999999999998 7
Q ss_pred CCCCCchHHHH-HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLA-YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+.||....... +...........+...++.+.+++.+||+.||++|||+.++++.+.
T Consensus 202 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 202 QVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred CCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 88986543221 1111111122234556788999999999999999999999998864
No 264
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.93 E-value=1.5e-25 Score=256.92 Aligned_cols=197 Identities=14% Similarity=0.108 Sum_probs=155.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
+.||||+++++++.. ...|++|||++ ++|.+++..+. .+++..+..++.|++.||+|||++|++||||||+||+++
T Consensus 53 l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~ 131 (257)
T cd05040 53 LDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA 131 (257)
T ss_pred cCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe
Confidence 579999999999988 89999999998 79999997754 589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
.++.+||+|||.++....... .........++..|+|||.+. ...++.++|||||||++|||++ |
T Consensus 132 ~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~~y~~pE~~~----------~~~~~~~~Di~slG~~l~el~t~g 197 (257)
T cd05040 132 SDDKVKIGDFGLMRALPQNED----HYVMEEHLKVPFAWCAPESLR----------TRTFSHASDVWMFGVTLWEMFTYG 197 (257)
T ss_pred cCCEEEecccccccccccccc----ceecccCCCCCceecCHHHhc----------ccCcCchhhhHHHHHHHHHHHhCC
Confidence 999999999999876532211 111112334567899999764 3357889999999999999998 9
Q ss_pred CCCCCchHHHHH-HhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFELSHLLAY-RRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~~~~~~~~-~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
.+||........ .... .......+...+..+.+++.+||+.+|++||++.++++.+
T Consensus 198 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 255 (257)
T cd05040 198 EEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFL 255 (257)
T ss_pred CCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHh
Confidence 989853322211 1111 1111223334567899999999999999999999999875
No 265
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.93 E-value=1.5e-25 Score=258.96 Aligned_cols=197 Identities=14% Similarity=0.145 Sum_probs=155.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpe 72 (1472)
++||||+++++++..+...|+||||++ ++|.+++.. ...+++.++..++.||+.||+|||++|++|+||||+
T Consensus 56 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~ 135 (269)
T cd05044 56 FNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAAR 135 (269)
T ss_pred cCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChh
Confidence 579999999999999999999999999 699999864 234788999999999999999999999999999999
Q ss_pred CEEEccCC-----cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 73 NVLVTSWN-----WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 73 NILv~~~~-----~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
||+++.++ .++|+|||+++........ .......++..|+|||.+. +..++.++||||||
T Consensus 136 nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG 200 (269)
T cd05044 136 NCLVSEKGYDADRVVKIGDFGLARDIYKSDYY-----RKEGEGLLPVRWMAPESLL----------DGKFTTQSDVWSFG 200 (269)
T ss_pred eEEEecCCCCCCcceEECCccccccccccccc-----ccCcccCCCccccCHHHHc----------cCCcccchhHHHHH
Confidence 99999888 8999999998765322110 0112233467799999764 34578899999999
Q ss_pred HHHHHHHh-CCCCCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 148 CVIAELFL-EVPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 148 ~il~eLlt-g~~pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
|++|||++ |.+||........... ........+...+..+.++|.+||..+|.+||+++++++.+
T Consensus 201 ~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 267 (269)
T cd05044 201 VLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEIL 267 (269)
T ss_pred HHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHH
Confidence 99999998 8888864332222111 11112223344567899999999999999999999999875
No 266
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.93 E-value=1.6e-25 Score=257.50 Aligned_cols=200 Identities=12% Similarity=0.113 Sum_probs=153.1
Q ss_pred CCCCCcceeeEEEE-eCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQE-TDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~-~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++. .++..|++|||+. |+|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++
T Consensus 53 l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~ 132 (262)
T cd05058 53 FSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD 132 (262)
T ss_pred CCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc
Confidence 58999999999765 4667899999999 7999999764 3467888899999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC-
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE- 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg- 156 (1472)
+++.+||+|||+++.......... .......++..|+|||.+. ...++.++|||||||++|||++|
T Consensus 133 ~~~~~kl~dfg~~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~~ 199 (262)
T cd05058 133 ESFTVKVADFGLARDIYDKEYYSV---HNHTGAKLPVKWMALESLQ----------TQKFTTKSDVWSFGVLLWELMTRG 199 (262)
T ss_pred CCCcEEECCccccccccCCcceee---cccccCcCCccccChhHhc----------cCccchHHHHHHHHHHHHHHHcCC
Confidence 999999999999875432110000 0011223456799999764 23578899999999999999995
Q ss_pred CCCCCchHHHHHHhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.+||.............. .....+...++.+.+++.+||+.+|++||++.|+++.+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~ 257 (262)
T cd05058 200 APPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIE 257 (262)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 788865443332221111 111223345678999999999999999999999999854
No 267
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.93 E-value=1.9e-25 Score=259.92 Aligned_cols=188 Identities=17% Similarity=0.110 Sum_probs=149.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.++..++||||++ ++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+|||++.+
T Consensus 56 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~ 131 (279)
T cd06619 56 CDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTR 131 (279)
T ss_pred CCCCCeeeEEEEEEECCEEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCC
Confidence 589999999999999999999999999 477544 246889999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++....... .....++..|+|||.+. +..++.++|+||+||++|+|++|..|
T Consensus 132 ~~~~l~dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~~l~~l~~g~~p 192 (279)
T cd06619 132 GQVKLCDFGVSTQLVNSI---------AKTYVGTNAYMAPERIS----------GEQYGIHSDVWSLGISFMELALGRFP 192 (279)
T ss_pred CCEEEeeCCcceeccccc---------ccCCCCChhhcCceeec----------CCCCCCcchHHHHHHHHHHHHhCCCC
Confidence 999999999987542211 12345788899999775 33578899999999999999999888
Q ss_pred CCchH-------HHHHHhc--CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH-------LLAYRRG--QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~-------~~~~~~~--~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.... ....... ............++.++++|.+||+.||++||+++|+++|
T Consensus 193 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 193 YPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred chhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 85311 0011111 1111111223456789999999999999999999999988
No 268
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.93 E-value=1.4e-25 Score=262.58 Aligned_cols=197 Identities=17% Similarity=0.180 Sum_probs=156.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC------------------------CCCCHHHHHHHHHHHHHH
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP------------------------PFLSLVEKKWLAFQLLLA 55 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~------------------------~~l~~~~~~~i~~Qll~a 55 (1472)
++||||+++++.+..+...|+++||+. |+|.+++... ..+++..+..++.|++.|
T Consensus 60 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~ 139 (290)
T cd05045 60 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRG 139 (290)
T ss_pred CCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHH
Confidence 579999999999999999999999999 6999988542 237888999999999999
Q ss_pred HHHHHHCCCeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCC
Q 000470 56 VKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDA 135 (1472)
Q Consensus 56 L~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~ 135 (1472)
|.|||++||+||||||+|||+++++.++|+|||+++....... .. ......++..|+|||.+. +.
T Consensus 140 l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~----~~-~~~~~~~~~~y~apE~~~----------~~ 204 (290)
T cd05045 140 MQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS----YV-KRSKGRIPVKWMAIESLF----------DH 204 (290)
T ss_pred HHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccc----hh-cccCCCCCccccCHHHHc----------cC
Confidence 9999999999999999999999999999999999875432111 00 011223456799999764 33
Q ss_pred CCCccchHHHHHHHHHHHHh-CCCCCCchHHHH---HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 136 PLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 136 ~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.++.++|||||||++|||++ |.+||....... ....... ...+...+.++++++.+||+.||++||++.|+++.
T Consensus 205 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~ 282 (290)
T cd05045 205 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYR--MERPENCSEEMYNLMLTCWKQEPDKRPTFADISKE 282 (290)
T ss_pred CcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC--CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 57889999999999999998 888887544333 2222222 22344566789999999999999999999999998
Q ss_pred hhc
Q 000470 212 YAA 214 (1472)
Q Consensus 212 ~~~ 214 (1472)
+..
T Consensus 283 l~~ 285 (290)
T cd05045 283 LEK 285 (290)
T ss_pred HHH
Confidence 654
No 269
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.93 E-value=1e-25 Score=268.52 Aligned_cols=203 Identities=19% Similarity=0.178 Sum_probs=151.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|+|+||+. ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus 56 l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~ 135 (328)
T cd08226 56 FRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS 135 (328)
T ss_pred CCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe
Confidence 579999999999999999999999999 6999998763 3489999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++++||+.+.....................++..|+|||.+... ...++.++||||+||++|||++|.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~DiwslG~~l~el~~g~ 207 (328)
T cd08226 136 GDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQD--------LYGYNVKSDIYSVGITACELATGR 207 (328)
T ss_pred CCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCC--------CCCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999985432221111100000001112345679999987521 234788999999999999999999
Q ss_pred CCCCchHHHH-H---HhcC-CCC------------------------------------------CcccCCCCCHHHHHH
Q 000470 158 PFFELSHLLA-Y---RRGQ-YDP------------------------------------------SQHLEKIPDSGIRKM 190 (1472)
Q Consensus 158 ~pf~~~~~~~-~---~~~~-~~~------------------------------------------~~~l~~~~~~~l~~L 190 (1472)
+||....... + .... +.+ ........++.+.+|
T Consensus 208 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 287 (328)
T cd08226 208 VPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNL 287 (328)
T ss_pred CCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHH
Confidence 9996432111 1 1000 000 000112235678999
Q ss_pred HHHhcccCcCCCCCHHHHHHH
Q 000470 191 ILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 191 I~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.+||+.||++|||++|+++|
T Consensus 288 i~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 288 VELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred HHHHccCCcccCCCHHHHhhC
Confidence 999999999999999999998
No 270
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.93 E-value=1.8e-25 Score=257.89 Aligned_cols=197 Identities=17% Similarity=0.126 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++.+.+..|+++||++ |+|.+++.. ...+++.++..++.||+.||.|||++||+||||||+||+
T Consensus 59 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil 138 (267)
T cd08228 59 LNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVF 138 (267)
T ss_pred CCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEE
Confidence 579999999999999999999999999 699988752 345899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||.+....... .......+++.|+|||.+. +..++.++|+||+||++|||++
T Consensus 139 ~~~~~~~~l~d~g~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~----------~~~~~~~~Di~slG~~l~el~~ 201 (267)
T cd08228 139 ITATGVVKLGDLGLGRFFSSKT-------TAAHSLVGTPYYMSPERIH----------ENGYNFKSDIWSLGCLLYEMAA 201 (267)
T ss_pred EcCCCCEEECccccceeccchh-------HHHhcCCCCccccChhhhc----------cCCCCchhhHHHHHHHHHHHhc
Confidence 9999999999999877542111 1112345678899999764 2356788999999999999999
Q ss_pred CCCCCCchH--HHHHHhc--CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 156 EVPFFELSH--LLAYRRG--QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 156 g~~pf~~~~--~~~~~~~--~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
|..||.... ...+... .....+......+..++++|.+||+.+|++||++.++++.++.
T Consensus 202 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~ 264 (267)
T cd08228 202 LQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ 264 (267)
T ss_pred CCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence 977774321 1111111 1111112223456789999999999999999999999998654
No 271
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.93 E-value=1.8e-25 Score=262.42 Aligned_cols=192 Identities=19% Similarity=0.198 Sum_probs=156.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+|+||++ ++|.+++... .+++.++..++.|++.||.|||++|++||||||+||+++.+
T Consensus 73 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~ 151 (296)
T cd06655 73 LKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMD 151 (296)
T ss_pred cCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 579999999999999999999999999 5999988764 58999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++........ ......++..|+|||.+. ...++.++|||||||++|+|++|.+|
T Consensus 152 ~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slGvil~~lltg~~p 214 (296)
T cd06655 152 GSVKLTDFGFCAQITPEQS-------KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMVEGEPP 214 (296)
T ss_pred CCEEEccCccchhcccccc-------cCCCcCCCccccCcchhc----------CCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999998775421110 112334678899999764 23567899999999999999999988
Q ss_pred CCchHHH----HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLL----AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~----~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...+.. ...... .+....+...++.+++||.+||..||++||++.++++|
T Consensus 215 f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 215 YLNENPLRALYLIATNG-TPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred CCCCCHHHHHHHHHhcC-CcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 8654321 122221 11222334456789999999999999999999999988
No 272
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.93 E-value=1.3e-25 Score=262.00 Aligned_cols=193 Identities=17% Similarity=0.205 Sum_probs=156.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++|+||+++++.+..+...|++|||++ ++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++
T Consensus 57 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~ 136 (285)
T cd05632 57 VNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD 136 (285)
T ss_pred cCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC
Confidence 579999999999999999999999999 599888854 33599999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+++.++|+|||++...... . ......|+..|+|||.+. +..++.++|+||+||++|||++|.
T Consensus 137 ~~~~~kl~Dfg~~~~~~~~---~-----~~~~~~g~~~~~aPE~~~----------~~~~~~~~Di~slG~~l~~l~~g~ 198 (285)
T cd05632 137 DYGHIRISDLGLAVKIPEG---E-----SIRGRVGTVGYMAPEVLN----------NQRYTLSPDYWGLGCLIYEMIEGQ 198 (285)
T ss_pred CCCCEEEecCCcceecCCC---C-----cccCCCCCcCccChHHhc----------CCCCCcccchHHHHHHHHHHHhCC
Confidence 9999999999987643211 0 112345788999999764 345788999999999999999999
Q ss_pred CCCCchHH----HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 158 PFFELSHL----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
+||..... ..............+...+..+.+|+.+||+.||++||+ ++++++|
T Consensus 199 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 199 SPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred CCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 99964322 122222222223344456678999999999999999999 7888877
No 273
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.93 E-value=3.6e-26 Score=262.93 Aligned_cols=197 Identities=22% Similarity=0.201 Sum_probs=149.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++......++|+||++ |+|.++|... ..+++.++..|+.||+.||.|||+++|+||||+++||+++
T Consensus 58 l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~ 137 (259)
T PF07714_consen 58 LRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD 137 (259)
T ss_dssp HSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 479999999999998888999999999 7999999876 6799999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
+++.+||+|||+++..... ..............|+|||.+. ...++.++||||||+++|||++ |
T Consensus 138 ~~~~~Kl~~f~~~~~~~~~-----~~~~~~~~~~~~~~~~aPE~~~----------~~~~~~ksDVysfG~~l~ei~~~~ 202 (259)
T PF07714_consen 138 SNGQVKLSDFGLSRPISEK-----SKYKNDSSQQLPLRYLAPEVLK----------DGEYTKKSDVYSFGMLLYEILTLG 202 (259)
T ss_dssp TTTEEEEESTTTGEETTTS-----SSEEESTTSESGGGGS-HHHHH----------HSEESHHHHHHHHHHHHHHHHTTS
T ss_pred ccccccccccccccccccc-----cccccccccccccccccccccc----------cccccccccccccccccccccccc
Confidence 9999999999998765211 1111223334567799999775 2347899999999999999999 5
Q ss_pred CCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+.||.......+.... .......+...+..+.++|.+||..||++||++.++++.|
T Consensus 203 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 203 KFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp SGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cccccccccccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 7888643332221111 1111223445678899999999999999999999999763
No 274
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.93 E-value=1.7e-25 Score=259.42 Aligned_cols=193 Identities=20% Similarity=0.161 Sum_probs=157.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+|+||++ ++|.+++... .+++.+++.++.|++.||.|||++|++||||+|+||+++++
T Consensus 56 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~ 134 (274)
T cd06609 56 CRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEE 134 (274)
T ss_pred cCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC
Confidence 579999999999999999999999999 5999999876 68999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++........ .....++..|+|||.+. +..++.++||||+||++|+|++|.+|
T Consensus 135 ~~~~l~d~g~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~----------~~~~~~~sDv~slG~il~~l~tg~~p 197 (274)
T cd06609 135 GDVKLADFGVSGQLTSTMSK-------RNTFVGTPFWMAPEVIK----------QSGYDEKADIWSLGITAIELAKGEPP 197 (274)
T ss_pred CCEEEcccccceeecccccc-------cccccCCccccChhhhc----------cCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 99999999998765332111 12234577899999875 23478999999999999999999999
Q ss_pred CCchHHHHHH-hcCCCCCcccCCC-CCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYR-RGQYDPSQHLEKI-PDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~-~~~~~~~~~l~~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|......... .......+.+... .++.+.+++.+||..||++||+++++++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 198 LSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred cccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 9654322211 1111112222222 56789999999999999999999999987
No 275
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.93 E-value=1.6e-25 Score=257.57 Aligned_cols=195 Identities=14% Similarity=0.072 Sum_probs=154.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|++|||++ ++|.+++.. ...+++.....++.|++.||+|||+.|++||||||+||+++
T Consensus 58 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~ 137 (261)
T cd05072 58 LQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS 137 (261)
T ss_pred CCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec
Confidence 579999999999999999999999998 699999965 34588899999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
.++.++|+|||.+....... ........++..|+|||.+. ...++.++|||||||++|+|++ |
T Consensus 138 ~~~~~~l~dfg~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~~l~t~g 201 (261)
T cd05072 138 ESLMCKIADFGLARVIEDNE------YTAREGAKFPIKWTAPEAIN----------FGSFTIKSDVWSFGILLYEIVTYG 201 (261)
T ss_pred CCCcEEECCCccceecCCCc------eeccCCCccceecCCHHHhc----------cCCCChhhhhhhhHHHHHHHHccC
Confidence 99999999999987542111 00112223456799999764 3357889999999999999998 8
Q ss_pred CCCCCchHHHH---HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.+||....... ........ ......+..+.+++.+||..+|++||+++++++.++
T Consensus 202 ~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 259 (261)
T cd05072 202 KIPYPGMSNSDVMSALQRGYRM--PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLD 259 (261)
T ss_pred CCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 88986432221 11222211 122345678999999999999999999999998653
No 276
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.93 E-value=1e-25 Score=264.61 Aligned_cols=193 Identities=18% Similarity=0.173 Sum_probs=155.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..++..|+||||++ ++|.+++... .+++.++..++.|++.||.|||+.||+||||||+|||++.+
T Consensus 73 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~ 151 (297)
T cd06656 73 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMD 151 (297)
T ss_pred CCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 579999999999999999999999999 6999998764 48999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+........ ......+++.|+|||.+. +..++.++|+||+||++|+|++|.+|
T Consensus 152 ~~~~l~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slGvil~~l~tg~~p 214 (297)
T cd06656 152 GSVKLTDFGFCAQITPEQS-------KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMVEGEPP 214 (297)
T ss_pred CCEEECcCccceEccCCcc-------CcCcccCCccccCHHHHc----------CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999999998765421110 112335678899999764 33567899999999999999999999
Q ss_pred CCchHHHHH-Hh-c-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAY-RR-G-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~-~~-~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|........ .. . ...+....+...+..+++||.+||..||++||+++++++|
T Consensus 215 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 215 YLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 865432111 11 0 1111222334556789999999999999999999999998
No 277
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.93 E-value=1.3e-25 Score=261.66 Aligned_cols=195 Identities=25% Similarity=0.283 Sum_probs=152.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+||||+++ .|..++.....+++.+++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 57 ~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~ 136 (286)
T cd07847 57 LKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQ 136 (286)
T ss_pred CCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCC
Confidence 5799999999999999999999999996 555555555669999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+........ ......++..|+|||.+.. ...++.++||||+||++|||++|.+|
T Consensus 137 ~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~i~~~l~~g~~p 200 (286)
T cd07847 137 GQIKLCDFGFARILTGPGD-------DYTDYVATRWYRAPELLVG---------DTQYGPPVDVWAIGCVFAELLTGQPL 200 (286)
T ss_pred CcEEECccccceecCCCcc-------cccCcccccccCCHHHHhC---------CCCcCchhhhHHHHHHHHHHHhCCCC
Confidence 9999999999876532211 0112335778999997642 23568899999999999999999999
Q ss_pred CCchHH----HHHHhc--------------------CCCCCc-c------cCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 160 FELSHL----LAYRRG--------------------QYDPSQ-H------LEKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 160 f~~~~~----~~~~~~--------------------~~~~~~-~------l~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
|..... ...... ...+.. . .....+..+.+||.+||+.||++||++.|+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ei 280 (286)
T cd07847 201 WPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEEL 280 (286)
T ss_pred CCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHH
Confidence 964321 111110 000000 0 011235779999999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
+.|
T Consensus 281 l~~ 283 (286)
T cd07847 281 LEH 283 (286)
T ss_pred hcC
Confidence 988
No 278
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.93 E-value=6.8e-26 Score=260.13 Aligned_cols=193 Identities=18% Similarity=0.220 Sum_probs=160.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+|+||+. ++|.+++.....+++.++..++.||+.||.|||++|++|+||||+||+++++
T Consensus 57 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~ 136 (258)
T cd05578 57 LNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQ 136 (258)
T ss_pred CCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCC
Confidence 589999999999999999999999999 5999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+....... ......++..|+|||.+. ...++.++|+||+||++|+|++|..|
T Consensus 137 ~~~~l~d~~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~~l~~g~~p 198 (258)
T cd05578 137 GHVHITDFNIATKVTPDT--------LTTSTSGTPGYMAPEVLC----------RQGYSVAVDWWSLGVTAYECLRGKRP 198 (258)
T ss_pred CCEEEeecccccccCCCc--------cccccCCChhhcCHHHHc----------ccCCCCcccchhhHHHHHHHHhCCCC
Confidence 999999999876543221 112344677899999775 22478899999999999999999888
Q ss_pred CCchH---HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH--HHHHHH
Q 000470 160 FELSH---LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA--ESYLQN 211 (1472)
Q Consensus 160 f~~~~---~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa--~elL~~ 211 (1472)
|.... ...+...........+...+..+.++|.+||+.||.+||++ .|+++|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~ 255 (258)
T cd05578 199 YRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNH 255 (258)
T ss_pred CCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcC
Confidence 87543 23333222223334455566889999999999999999999 998877
No 279
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.93 E-value=2.7e-25 Score=259.00 Aligned_cols=198 Identities=17% Similarity=0.151 Sum_probs=151.9
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.. +...|++|||+. ++|.+++... .+++.+++.++.|++.||.|||++||+||||||+|||++
T Consensus 63 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~ 141 (283)
T cd05080 63 LYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD 141 (283)
T ss_pred CCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc
Confidence 589999999998765 346899999999 6999999765 489999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+++.++|+|||+++....... .........++..|+|||.+. ...++.++|||||||++|||++|.
T Consensus 142 ~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~~~~~PE~~~----------~~~~~~~~Di~slG~~l~el~tg~ 207 (283)
T cd05080 142 NDRLVKIGDFGLAKAVPEGHE----YYRVREDGDSPVFWYAVECLK----------ENKFSYASDVWSFGVTLYELLTHC 207 (283)
T ss_pred CCCcEEEeecccccccCCcch----hhccCCCCCCCceeeCHhHhc----------ccCCCcccccHHHHHHHHHHHhCC
Confidence 999999999999876532111 000112233456799999764 235788999999999999999998
Q ss_pred CCCCchH--HHHHHhcCC--------------CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSH--LLAYRRGQY--------------DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~--~~~~~~~~~--------------~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.||.... ......... ......+...+..+++++.+||+.||++||+++++++.+.
T Consensus 208 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~ 279 (283)
T cd05080 208 DSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILK 279 (283)
T ss_pred CCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 7775321 111110000 0011123345678999999999999999999999998754
No 280
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.93 E-value=6.6e-26 Score=273.06 Aligned_cols=191 Identities=22% Similarity=0.330 Sum_probs=150.4
Q ss_pred CCCCCcceeeEEEEeC------CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~------~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++..+ ...|+||||+.++|.+.+... +++.++..++.|++.||+|||++||+||||||+||
T Consensus 72 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Ni 149 (353)
T cd07850 72 VNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 149 (353)
T ss_pred cCCCCCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHE
Confidence 5899999999988654 357999999999999998765 89999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
+++.++.++|+|||.++...... ......++..|+|||.+. +..++.++||||+||++|+|+
T Consensus 150 l~~~~~~~kL~Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~~l~~l~ 211 (353)
T cd07850 150 VVKSDCTLKILDFGLARTAGTSF--------MMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGEMI 211 (353)
T ss_pred EECCCCCEEEccCccceeCCCCC--------CCCCCcccccccCHHHHh----------CCCCCCchhhHhHHHHHHHHH
Confidence 99999999999999987542211 112334678899999875 346788999999999999999
Q ss_pred hCCCCCCchHHH----HH----------------------HhcCC--CCC---ccc------------CCCCCHHHHHHH
Q 000470 155 LEVPFFELSHLL----AY----------------------RRGQY--DPS---QHL------------EKIPDSGIRKMI 191 (1472)
Q Consensus 155 tg~~pf~~~~~~----~~----------------------~~~~~--~~~---~~l------------~~~~~~~l~~LI 191 (1472)
+|+.||...+.. .+ ..... ... ... ....++.+++||
T Consensus 212 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 291 (353)
T cd07850 212 RGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLL 291 (353)
T ss_pred HCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHH
Confidence 999888643211 00 00000 000 000 112345689999
Q ss_pred HHhcccCcCCCCCHHHHHHH
Q 000470 192 LHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 192 ~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+||+.||++||++.|+|+|
T Consensus 292 ~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 292 SKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHcCCChhhCcCHHHHhcC
Confidence 99999999999999999988
No 281
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.93 E-value=1.5e-25 Score=260.30 Aligned_cols=193 Identities=18% Similarity=0.108 Sum_probs=155.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||++ ++|.+++..+ .+++..++.++.|++.||.|||++|++|+||||+||+++.+
T Consensus 59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~ 137 (277)
T cd06642 59 CDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPG-PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQ 137 (277)
T ss_pred CCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCC
Confidence 579999999999999999999999999 5999988754 58999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++........ ......++..|+|||.+. +..++.++|+||+||++|||++|.+|
T Consensus 138 ~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~tg~~p 200 (277)
T cd06642 138 GDVKLADFGVAGQLTDTQI-------KRNTFVGTPFWMAPEVIK----------QSAYDFKADIWSLGITAIELAKGEPP 200 (277)
T ss_pred CCEEEccccccccccCcch-------hhhcccCcccccCHHHhC----------cCCCchhhhHHHHHHHHHHHHhCCCC
Confidence 9999999998865422110 112234677899999764 23567899999999999999999988
Q ss_pred CCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|............ ......+....+..+.++|.+||+.+|++||++.++++|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 201 NSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 8643222111111 111223344556789999999999999999999999998
No 282
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.93 E-value=2.2e-25 Score=271.37 Aligned_cols=196 Identities=15% Similarity=0.162 Sum_probs=153.4
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-------------------------------------------
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP------------------------------------------- 37 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~------------------------------------------- 37 (1472)
.||||+++++++......|||||||+ |+|.+++..+
T Consensus 99 ~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (400)
T cd05105 99 PHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYM 178 (400)
T ss_pred CCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccc
Confidence 39999999999999999999999999 7999987542
Q ss_pred -----------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 38 -----------------------------------------------------PFLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 38 -----------------------------------------------------~~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
..+++.++..++.||+.||+|||+.||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i 258 (400)
T cd05105 179 DMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNC 258 (400)
T ss_pred ccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 137788889999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||++.++.+||+|||+++........ .......++..|+|||.+. +..++.++|||
T Consensus 259 vH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Diw 323 (400)
T cd05105 259 VHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY-----VSKGSTFLPVKWMAPESIF----------DNLYTTLSDVW 323 (400)
T ss_pred eCCCCChHhEEEeCCCEEEEEeCCcceeccccccc-----cccCCcCCCcceEChhhhc----------CCCCCchhhHH
Confidence 99999999999999999999999998754221110 1112233567799999764 34578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchH----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 145 AVGCVIAELFL-EVPFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||||++|||++ |..||.... .......... ...+...+..+.+++.+||+.||++||++.++.+.+..
T Consensus 324 SlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 324 SYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYR--MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred HHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCC--CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 99999999997 777775321 1111222211 22334556789999999999999999999999987653
No 283
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.93 E-value=1.1e-25 Score=265.66 Aligned_cols=199 Identities=22% Similarity=0.317 Sum_probs=153.7
Q ss_pred CCCCCcceeeEEEEeCC--------eEEEEecccCCcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000470 1 MSSTPCVHKKFWQETDK--------AAYLLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~--------~~~lV~Ey~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKp 71 (1472)
++||||+++++++.... ..|+||||+.++|.+.+.... .+++.+++.++.||+.||+|||++|++|+||||
T Consensus 68 l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p 147 (310)
T cd07865 68 LKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKA 147 (310)
T ss_pred CCCCCccceEEEEecccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence 57999999999987654 459999999999999887653 689999999999999999999999999999999
Q ss_pred CCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 72 eNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
+||+++.++.+||+|||.+.......... ........++..|+|||.+.. ...++.++||||+||++|
T Consensus 148 ~nil~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slG~~l~ 215 (310)
T cd07865 148 ANILITKDGILKLADFGLARAFSLSKNSK---PNRYTNRVVTLWYRPPELLLG---------ERDYGPPIDMWGAGCIMA 215 (310)
T ss_pred HHEEECCCCcEEECcCCCcccccCCcccC---CCCccCcccCccccCcHHhcC---------CcccCchhhhHHHHHHHH
Confidence 99999999999999999987664333221 111223346788999997642 224678999999999999
Q ss_pred HHHhCCCCCCchHHHHH----H--hcCCCC------------------C-------c-ccCCCCCHHHHHHHHHhcccCc
Q 000470 152 ELFLEVPFFELSHLLAY----R--RGQYDP------------------S-------Q-HLEKIPDSGIRKMILHMIQLEP 199 (1472)
Q Consensus 152 eLltg~~pf~~~~~~~~----~--~~~~~~------------------~-------~-~l~~~~~~~l~~LI~~mL~~dP 199 (1472)
||++|.+||........ . .+...+ . . ....+.+..+++||.+||..||
T Consensus 216 el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P 295 (310)
T cd07865 216 EMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDP 295 (310)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCCh
Confidence 99999999864432110 0 010000 0 0 0112345678999999999999
Q ss_pred CCCCCHHHHHHH
Q 000470 200 ELRFSAESYLQN 211 (1472)
Q Consensus 200 ~~Rpsa~elL~~ 211 (1472)
++||+++|+++|
T Consensus 296 ~~R~t~~e~l~h 307 (310)
T cd07865 296 AKRIDADTALNH 307 (310)
T ss_pred hhccCHHHHhcC
Confidence 999999999998
No 284
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.93 E-value=1.7e-25 Score=262.76 Aligned_cols=193 Identities=20% Similarity=0.227 Sum_probs=154.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+++||++ ++|.+++.. ..+++.+++.++.|++.||.|||++||+||||||+||+++.+
T Consensus 75 l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~ 153 (297)
T cd06659 75 YQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLD 153 (297)
T ss_pred CCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccC
Confidence 579999999999999999999999999 589887765 458999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++........ ......++..|+|||.+. +..++.++||||+||++|||++|++|
T Consensus 154 ~~~kL~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~~g~~p 216 (297)
T cd06659 154 GRVKLSDFGFCAQISKDVP-------KRKSLVGTPYWMAPEVIS----------RTPYGTEVDIWSLGIMVIEMVDGEPP 216 (297)
T ss_pred CcEEEeechhHhhcccccc-------cccceecCccccCHHHHc----------cCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999998764421111 012344678899999874 23568899999999999999999888
Q ss_pred CCchH-HHHHHhc--CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH-LLAYRRG--QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~-~~~~~~~--~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.... ...+... ............+..+.++|.+||+.+|++||+++++++|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 217 YFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 75332 2222221 1111112223456789999999999999999999999998
No 285
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.93 E-value=1.2e-25 Score=262.01 Aligned_cols=195 Identities=23% Similarity=0.327 Sum_probs=153.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++++++.++..|+||||+.++|.+++.. ...+++..++.++.|++.||+|||++|++||||||+||+++.
T Consensus 56 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~ 135 (284)
T cd07860 56 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 135 (284)
T ss_pred cCCCCCcchhhhcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC
Confidence 579999999999999999999999999999998865 356899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.++....... ......++..|+|||.+.. ...++.++|||||||++|||++|++
T Consensus 136 ~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~~l~tg~~ 199 (284)
T cd07860 136 EGAIKLADFGLARAFGVPVR-------TYTHEVVTLWYRAPEILLG---------CKYYSTAVDIWSLGCIFAEMVTRRA 199 (284)
T ss_pred CCCEEEeeccchhhcccCcc-------ccccccccccccCCeEEec---------CCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 99999999998765422211 0122345778999997742 2245788999999999999999998
Q ss_pred CCCchHH----HHHHhcCCCC-------------------------CcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 159 FFELSHL----LAYRRGQYDP-------------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 159 pf~~~~~----~~~~~~~~~~-------------------------~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
||..... ....+....+ ........++.++++|.+||+.||++||++++++
T Consensus 200 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 279 (284)
T cd07860 200 LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAAL 279 (284)
T ss_pred CCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHh
Confidence 8854321 1111100000 0011223467899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 280 ~~ 281 (284)
T cd07860 280 AH 281 (284)
T ss_pred cC
Confidence 88
No 286
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.93 E-value=1.4e-25 Score=261.14 Aligned_cols=195 Identities=23% Similarity=0.323 Sum_probs=155.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.++...|++|||++++|.+++...+ .+++..+..++.|++.||+|||++|++||||+|+||+++.
T Consensus 55 l~~~~iv~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~ 134 (283)
T cd07835 55 LNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR 134 (283)
T ss_pred cCCCCccCHhheeccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC
Confidence 57999999999999999999999999999999998765 6899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.++....+... .....++..|+|||.+.. ...++.++||||+||++|+|++|++
T Consensus 135 ~~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~~g~~ 198 (283)
T cd07835 135 EGALKLADFGLARAFGVPVRT-------YTHEVVTLWYRAPEILLG---------SRQYSTPVDIWSIGCIFAEMVNRRP 198 (283)
T ss_pred CCcEEEeecccccccCCCccc-------cCccccccCCCCCceeec---------CcccCcHHHHHHHHHHHHHHHhCCC
Confidence 999999999998654322111 122245778999997642 2346788999999999999999999
Q ss_pred CCCchHH----HHHHhcCC-------------------------CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 159 FFELSHL----LAYRRGQY-------------------------DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 159 pf~~~~~----~~~~~~~~-------------------------~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
||..... ..+.+... ..........+..+.++|.+||+.||++||+++|++
T Consensus 199 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il 278 (283)
T cd07835 199 LFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAAL 278 (283)
T ss_pred CCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 9864321 11111000 000111223457899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 279 ~~ 280 (283)
T cd07835 279 QH 280 (283)
T ss_pred cC
Confidence 88
No 287
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93 E-value=2.1e-25 Score=260.27 Aligned_cols=198 Identities=19% Similarity=0.152 Sum_probs=157.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNIL 75 (1472)
++||||+++++.+..++..|+||||++ ++|.+++... ..+++..+++++.||+.||.|||+ .||+||||||+||+
T Consensus 56 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil 135 (286)
T cd06622 56 AVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVL 135 (286)
T ss_pred cCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEE
Confidence 579999999999999999999999999 5998888763 368999999999999999999997 59999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||.+...... ...+..++..|+|||.+..... .....++.++||||+||++|+|++
T Consensus 136 ~~~~~~~~l~dfg~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~----~~~~~~~~~~DiwslG~il~~l~~ 202 (286)
T cd06622 136 VNGNGQVKLCDFGVSGNLVAS---------LAKTNIGCQSYMAPERIKSGGP----NQNPTYTVQSDVWSLGLSILEMAL 202 (286)
T ss_pred ECCCCCEEEeecCCcccccCC---------ccccCCCccCccCcchhcCCCC----CccCCCCcccchHhHHHHHHHHHh
Confidence 999999999999987654211 1123446778999998753321 123457889999999999999999
Q ss_pred CCCCCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|+.||....... +..........++...+++++++|.+||+.+|++||+++++++|
T Consensus 203 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 203 GRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 999985432211 11111122233444577899999999999999999999999988
No 288
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.93 E-value=2.6e-25 Score=260.82 Aligned_cols=198 Identities=15% Similarity=0.144 Sum_probs=153.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHG 67 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~ 67 (1472)
++||||+++++++..+...|+||||++ ++|.+++... +.+++.++..++.|++.||+|||++|++||
T Consensus 74 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~ 153 (295)
T cd05097 74 LKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHR 153 (295)
T ss_pred CCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeecc
Confidence 589999999999999999999999999 6999998643 236888999999999999999999999999
Q ss_pred CCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 68 DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
||||+||+++.++.+||+|||++....... .........++..|+|||.+. ...++.++||||||
T Consensus 154 dlkp~Nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwSlG 218 (295)
T cd05097 154 DLATRNCLVGNHYTIKIADFGMSRNLYSGD-----YYRIQGRAVLPIRWMAWESIL----------LGKFTTASDVWAFG 218 (295)
T ss_pred ccChhhEEEcCCCcEEecccccccccccCc-----ceeccCcCcCceeecChhhhc----------cCCcCchhhHHHHH
Confidence 999999999999999999999887542111 111112233466899999764 33578899999999
Q ss_pred HHHHHHHh--CCCCCCchHHHHHH-------h-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 148 CVIAELFL--EVPFFELSHLLAYR-------R-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 148 ~il~eLlt--g~~pf~~~~~~~~~-------~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|++|||++ +..||......... . .........+...++.+.+|+.+||+.||++||+++++++.++
T Consensus 219 ~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 219 VTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 99999998 56777643222111 1 1111111233445678999999999999999999999998753
No 289
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.93 E-value=3.2e-25 Score=256.13 Aligned_cols=196 Identities=23% Similarity=0.272 Sum_probs=155.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFL--SLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l--~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||+++++++..+...|+|+||++ ++|.+++... ..+ ++..+..++.||+.||.|||++||+||||||+||++
T Consensus 62 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~ 141 (268)
T cd06624 62 LKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLV 141 (268)
T ss_pred cCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE
Confidence 589999999999999999999999999 6999999764 345 888899999999999999999999999999999999
Q ss_pred cc-CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 77 TS-WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 77 ~~-~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
+. .+.++|+|||.+...... +.. .....++..|+|||.+... ...++.++|+||+|+++|+|++
T Consensus 142 ~~~~~~~~l~dfg~~~~~~~~--~~~-----~~~~~~~~~~~aPE~~~~~--------~~~~~~~~Dv~slGvvl~~l~~ 206 (268)
T cd06624 142 NTYSGVVKISDFGTSKRLAGI--NPC-----TETFTGTLQYMAPEVIDKG--------PRGYGAPADIWSLGCTIVEMAT 206 (268)
T ss_pred cCCCCeEEEecchhheecccC--CCc-----cccCCCCccccChhhhccc--------cccCCchhhhHHHHHHHHHHHh
Confidence 76 679999999987654211 111 1122467889999987421 2346789999999999999999
Q ss_pred CCCCCCchH---HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSH---LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~---~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.+||.... ...+........+.++...++.+++|+.+||+.+|++||++.|+++|
T Consensus 207 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 207 GKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred CCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 988885322 11222222222334555667889999999999999999999999998
No 290
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.93 E-value=2.9e-25 Score=256.69 Aligned_cols=203 Identities=18% Similarity=0.162 Sum_probs=152.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-----~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++.+....|+||||++ |+|.+++... ..+++..++.++.|++.||+|||++|++||||||+||
T Consensus 52 l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~ni 131 (269)
T cd05087 52 LQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNC 131 (269)
T ss_pred CCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceE
Confidence 579999999999999999999999999 7999998642 2356778889999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
+++.++.++|+|||.++..... ..........++..|+|||.+...... .....++.++||||+||++|||+
T Consensus 132 l~~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~~~~~~~~DiwslG~~l~el~ 203 (269)
T cd05087 132 LLTADLTVKIGDYGLSHNKYKE-----DYYVTPDQLWVPLRWIAPELVDEVHGN---LLVVDQTKESNVWSLGVTIWELF 203 (269)
T ss_pred EEcCCCcEEECCccccccccCc-----ceeecCCCcCCcccccCHhHhcccccc---ccccCCCccchhHHHHHHHHHHH
Confidence 9999999999999988643211 111111233457789999987532110 11234688999999999999999
Q ss_pred h-CCCCCCchHHH---HHH--hcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 155 L-EVPFFELSHLL---AYR--RGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 155 t-g~~pf~~~~~~---~~~--~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+ |.+||...... .+. ..... +.+.+....++.+++++.+|+ .+|++|||++|++..|
T Consensus 204 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l 267 (269)
T cd05087 204 ELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLL 267 (269)
T ss_pred hCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHh
Confidence 6 98888543211 111 11111 222233345678999999998 6899999999999764
No 291
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.93 E-value=3.6e-25 Score=252.73 Aligned_cols=196 Identities=15% Similarity=0.064 Sum_probs=154.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ ++|.+++.. ...+++.++..++.|++.||.|||++|++||||||+||+++.
T Consensus 49 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~ 128 (250)
T cd05085 49 YDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGE 128 (250)
T ss_pred CCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcC
Confidence 579999999999999999999999998 699999875 345899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||++........ .......++..|+|||.+. ...++.++||||+||++|++++ |.
T Consensus 129 ~~~~~l~d~g~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~ll~~~~~~g~ 192 (250)
T cd05085 129 NNVLKISDFGMSRQEDDGIY------SSSGLKQIPIKWTAPEALN----------YGRYSSESDVWSYGILLWETFSLGV 192 (250)
T ss_pred CCeEEECCCccceecccccc------ccCCCCCCcccccCHHHhc----------cCCCCchhHHHHHHHHHHHHhcCCC
Confidence 99999999998764321100 0011223356699999764 3356889999999999999998 88
Q ss_pred CCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 158 PFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 158 ~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
.||.......... .........+...+..+.+++.+||..+|++||++.|+++.+
T Consensus 193 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 248 (250)
T cd05085 193 CPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248 (250)
T ss_pred CCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence 8886443322211 111112223344568899999999999999999999999875
No 292
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.93 E-value=4.3e-25 Score=258.42 Aligned_cols=195 Identities=23% Similarity=0.345 Sum_probs=151.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||+.++|.+++.. ...+++.+++.++.||+.||.|||++||+|+||||+|||++.+
T Consensus 60 l~h~ni~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~ 139 (291)
T cd07870 60 LKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYL 139 (291)
T ss_pred cCCCCEeEEEEEEecCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCC
Confidence 579999999999999999999999999999888765 3458899999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||+++....+... .....++..|+|||.+.. ...++.++||||+||++|||++|.+|
T Consensus 140 ~~~~l~Dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~~l~~g~~~ 203 (291)
T cd07870 140 GELKLADFGLARAKSIPSQT-------YSSEVVTLWYRPPDVLLG---------ATDYSSALDIWGAGCIFIEMLQGQPA 203 (291)
T ss_pred CcEEEeccccccccCCCCCC-------CCCccccccccCCceeec---------CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 99999999988754322111 122345788999997742 22467789999999999999999999
Q ss_pred CCchHH-----HHHHh--c--------------CCCC-------Cccc----CC-CCCHHHHHHHHHhcccCcCCCCCHH
Q 000470 160 FELSHL-----LAYRR--G--------------QYDP-------SQHL----EK-IPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 160 f~~~~~-----~~~~~--~--------------~~~~-------~~~l----~~-~~~~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
|..... .+... + .+.. ...+ .. ..+..+.+++.+||+.||++|||++
T Consensus 204 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~ 283 (291)
T cd07870 204 FPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQ 283 (291)
T ss_pred CCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHH
Confidence 863221 11000 0 0000 0000 00 1246789999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
|++.|
T Consensus 284 ~~l~h 288 (291)
T cd07870 284 DALLH 288 (291)
T ss_pred HHhcC
Confidence 99988
No 293
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.93 E-value=3.6e-25 Score=254.74 Aligned_cols=200 Identities=18% Similarity=0.211 Sum_probs=160.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++......|+|+||++ ++|.+++...+.+++.+++.++.|++.||.|||+.||+||||||+||+++.+
T Consensus 56 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~ 135 (264)
T cd06626 56 LKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHN 135 (264)
T ss_pred CCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 579999999999999999999999999 6999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+.......... ...+....++..|+|||.+.... ...++.++||||+||++|+|++|.+|
T Consensus 136 ~~~kl~d~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~PE~~~~~~-------~~~~~~~~Dv~s~G~il~~l~~g~~p 205 (264)
T cd06626 136 GVIKLGDFGCAVKLKNNTTTM---GEEVQSLAGTPAYMAPEVITGGK-------GKGHGRAADIWSLGCVVLEMATGKRP 205 (264)
T ss_pred CCEEEcccccccccCCCCCcc---cccccCCcCCcCccChhhccCCC-------CCCCCcccchHHHHHHHHHHHhCCCC
Confidence 999999999987653322211 11123455678899999875221 13478899999999999999999989
Q ss_pred CCch-HH--HHHHhcCCCCCcccCCC--CCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELS-HL--LAYRRGQYDPSQHLEKI--PDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~-~~--~~~~~~~~~~~~~l~~~--~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|... .. ..+.... .....++.. .++.+.++|.+||+.+|++||++++++.|
T Consensus 206 f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 206 WSELDNEFQIMFHVGA-GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred ccCCcchHHHHHHHhc-CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 8533 11 1122221 222233333 37789999999999999999999999987
No 294
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.93 E-value=3.3e-25 Score=253.27 Aligned_cols=198 Identities=16% Similarity=0.110 Sum_probs=155.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++......|+||||+. ++|.+++.. ...+++..+..++.|++.||.|||++|++||||||+||+++.
T Consensus 49 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~ 128 (251)
T cd05041 49 YDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGE 128 (251)
T ss_pred CCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcC
Confidence 579999999999999999999999998 699999965 345889999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.++...... +.........+..|+|||.+. +..++.++|||||||++|||++ |.
T Consensus 129 ~~~~~l~d~g~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~i~~~l~t~~~ 193 (251)
T cd05041 129 NNVLKISDFGMSREEEGGI-----YTVSDGLKQIPIKWTAPEALN----------YGRYTSESDVWSYGILLWETFSLGD 193 (251)
T ss_pred CCcEEEeeccccccccCCc-----ceeccccCcceeccCChHhhc----------cCCCCcchhHHHHHHHHHHHHhccC
Confidence 9999999999887542110 000001122345699999764 3357889999999999999999 68
Q ss_pred CCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+||............ .......+...+..+.+++.+||..+|++||+++|+++.+.
T Consensus 194 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 194 TPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 888654322222111 11122234455678999999999999999999999998753
No 295
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.93 E-value=2.5e-25 Score=255.00 Aligned_cols=194 Identities=21% Similarity=0.253 Sum_probs=159.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+++||++ ++|.+++...+.+++.++..++.||+.||.|||+.||+||||||+||+++.+
T Consensus 59 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~ 138 (258)
T cd06632 59 LQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTN 138 (258)
T ss_pred cCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 579999999999999999999999999 5999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||.+....... ......++..|+|||.+.. ...++.++|+||+||++|+|++|.+|
T Consensus 139 ~~~kl~d~~~~~~~~~~~--------~~~~~~~~~~y~~pe~~~~---------~~~~~~~~D~~slG~~l~~l~~g~~p 201 (258)
T cd06632 139 GVVKLADFGMAKQVVEFS--------FAKSFKGSPYWMAPEVIAQ---------QGGYGLAADIWSLGCTVLEMATGKPP 201 (258)
T ss_pred CCEEEccCccceeccccc--------cccccCCCcceeCHHHhcC---------CCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 999999999876542211 1234456788999997642 11378899999999999999999999
Q ss_pred CCchHH-HHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHL-LAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~-~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|..... ... ...........+...++.+++++.+||+.+|++||+++++++|
T Consensus 202 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 202 WSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred cccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 864332 111 1111122233455667889999999999999999999999988
No 296
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.93 E-value=1.3e-25 Score=258.13 Aligned_cols=201 Identities=21% Similarity=0.241 Sum_probs=157.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.++.++..|+++||++ ++|.+++...+.+++.++..++.||+.||.|||++|++||||+|+||+++.+
T Consensus 50 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~ 129 (265)
T cd05579 50 AQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN 129 (265)
T ss_pred CCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCC
Confidence 479999999999999999999999998 5999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCC-CCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDP-SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~-~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
+.++|+|||++.......... ...........++..|+|||.+. ...++.++|+|||||++|+|++|.+
T Consensus 130 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~----------~~~~~~~~Dv~slG~~~~~l~~g~~ 199 (265)
T cd05579 130 GHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVIL----------GQGHSKTVDWWSLGCILYEFLVGIP 199 (265)
T ss_pred CCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhc----------CCCCCcchhhHHHHHHHHHHHhCCC
Confidence 999999999877543321100 00000112234567899999764 2246789999999999999999999
Q ss_pred CCCchHHHHHHhcCCCCCcccCCC--CCHHHHHHHHHhcccCcCCCCCH---HHHHHH
Q 000470 159 FFELSHLLAYRRGQYDPSQHLEKI--PDSGIRKMILHMIQLEPELRFSA---ESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~~~~~~~~~~~~l~~~--~~~~l~~LI~~mL~~dP~~Rpsa---~elL~~ 211 (1472)
||...................+.. .+..+.+++.+||+.+|++||++ .++++|
T Consensus 200 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 200 PFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred CCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 987554333221111111112222 36789999999999999999999 999987
No 297
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=2.5e-25 Score=265.88 Aligned_cols=199 Identities=16% Similarity=0.141 Sum_probs=156.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
+||||+++++++..+...|+++||++ |+|.+++..+. .++..++..++.|++.||.|||++||
T Consensus 76 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi 155 (334)
T cd05100 76 KHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKC 155 (334)
T ss_pred CCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 69999999999999999999999998 69999997532 37788899999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||++.++.++|+|||.++....... ........++..|+|||.+. ...++.++|||
T Consensus 156 vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~ 220 (334)
T cd05100 156 IHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY-----YKKTTNGRLPVKWMAPEALF----------DRVYTHQSDVW 220 (334)
T ss_pred eccccccceEEEcCCCcEEECCcccceecccccc-----cccccCCCcCceEcCHHHhc----------cCCcCchhhhH
Confidence 9999999999999999999999998875421110 00111222345799999774 34578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcc
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 215 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 215 (1472)
||||++|||++ |.+||............ .......+...+..+.+++.+||+.+|++||++.|++++++..
T Consensus 221 slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~ 293 (334)
T cd05100 221 SFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293 (334)
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 99999999998 78888654433332211 1111223345567899999999999999999999999997544
No 298
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.93 E-value=2e-25 Score=258.28 Aligned_cols=198 Identities=18% Similarity=0.092 Sum_probs=153.9
Q ss_pred CCCCcceeeEEEEeCC------eEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 000470 2 SSTPCVHKKFWQETDK------AAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 70 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~------~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLK 70 (1472)
+||||+++++++.... ..|+||||++ ++|.+++.. +..+++.+++.++.|++.||.|||++|++||||+
T Consensus 61 ~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~ 140 (275)
T cd06608 61 NHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIK 140 (275)
T ss_pred CCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence 6999999999997644 5899999999 599998864 3468999999999999999999999999999999
Q ss_pred CCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 71 CENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 71 peNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
|+||+++.++.++|+|||.+........ ......++..|+|||.+.... .....++.++|||||||++
T Consensus 141 p~ni~~~~~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slG~il 208 (275)
T cd06608 141 GQNILLTKNAEVKLVDFGVSAQLDSTLG-------RRNTFIGTPYWMAPEVIACDE-----QPDASYDARSDVWSLGITA 208 (275)
T ss_pred HHHEEEccCCeEEECCCccceecccchh-------hhcCccccccccCHhHhcccc-----cccCCccccccHHHhHHHH
Confidence 9999999999999999998765422111 112344678899999875332 1234678899999999999
Q ss_pred HHHHhCCCCCCchH-HHHHHhcCCCCCcc--cCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 151 AELFLEVPFFELSH-LLAYRRGQYDPSQH--LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 151 ~eLltg~~pf~~~~-~~~~~~~~~~~~~~--l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|+|++|.+||.... .............. .+...+..+++||.+||..||++|||++|+++|
T Consensus 209 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 209 IELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred HHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 99999999986332 12222211111111 122245689999999999999999999999988
No 299
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.93 E-value=2.9e-25 Score=262.34 Aligned_cols=195 Identities=24% Similarity=0.295 Sum_probs=152.5
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+ ...|+||||+.++|.+++.. +..+++.+++.++.||+.||.|||++|++||||||+||+++
T Consensus 63 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~ 142 (309)
T cd07845 63 LRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT 142 (309)
T ss_pred CCCCCCcceEEEEecCCCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 5799999999999765 56899999999999998875 45689999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.++........ .....++..|+|||.+.+ ...++.++||||+||++|||++|.
T Consensus 143 ~~~~~kL~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslG~il~el~~g~ 206 (309)
T cd07845 143 DKGCLKIADFGLARTYGLPAKP-------MTPKVVTLWYRAPELLLG---------CTTYTTAIDMWAVGCILAELLAHK 206 (309)
T ss_pred CCCCEEECccceeeecCCccCC-------CCcccccccccChhhhcC---------CCCcCchHHHHHHHHHHHHHHhCC
Confidence 9999999999998765322110 112234677999997742 235688999999999999999999
Q ss_pred CCCCchHHHH----HHhcCC-------------------CCC-cc------cCCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 000470 158 PFFELSHLLA----YRRGQY-------------------DPS-QH------LEKIPDSGIRKMILHMIQLEPELRFSAES 207 (1472)
Q Consensus 158 ~pf~~~~~~~----~~~~~~-------------------~~~-~~------l~~~~~~~l~~LI~~mL~~dP~~Rpsa~e 207 (1472)
+||....... +..... ... .. .....++.+.+||.+||+.||++|||++|
T Consensus 207 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~ 286 (309)
T cd07845 207 PLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEE 286 (309)
T ss_pred CCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHH
Confidence 9996443221 111000 000 00 01124678899999999999999999999
Q ss_pred HHHH
Q 000470 208 YLQN 211 (1472)
Q Consensus 208 lL~~ 211 (1472)
+++|
T Consensus 287 il~h 290 (309)
T cd07845 287 ALES 290 (309)
T ss_pred HhcC
Confidence 9998
No 300
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.93 E-value=3.9e-25 Score=255.32 Aligned_cols=197 Identities=15% Similarity=0.120 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.+++..|+||||++ ++|.+++... +.+++.++..++.|++.||.|||++|++||||||+|||++.
T Consensus 62 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~ 141 (267)
T cd05066 62 FDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS 141 (267)
T ss_pred CCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECC
Confidence 579999999999999999999999998 6999999764 45899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.++....... .........++..|+|||.+. ...++.++|+||+||++||+++ |.
T Consensus 142 ~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~~l~ell~~g~ 207 (267)
T cd05066 142 NLVCKVSDFGLSRVLEDDPE----AAYTTRGGKIPIRWTAPEAIA----------YRKFTSASDVWSYGIVMWEVMSYGE 207 (267)
T ss_pred CCeEEeCCCCcccccccccc----eeeecCCCccceeecCHhHhc----------cCccCchhhhHHHHHHHHHHhcCCC
Confidence 99999999998875532111 111111222356799999774 3457889999999999999886 88
Q ss_pred CCCCchHHH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.||...... ......+. ...+...++.+.+++.+||+.+|.+||++.++++.+.
T Consensus 208 ~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 264 (267)
T cd05066 208 RPYWEMSNQDVIKAIEEGYR--LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILD 264 (267)
T ss_pred CCcccCCHHHHHHHHhCCCc--CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHH
Confidence 888543221 11111111 1223345678999999999999999999999998754
No 301
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.93 E-value=2e-25 Score=259.94 Aligned_cols=198 Identities=19% Similarity=0.097 Sum_probs=153.7
Q ss_pred CCCCcceeeEEEEe------CCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000470 2 SSTPCVHKKFWQET------DKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~------~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpe 72 (1472)
+||||+++++++.. +...|++|||++ |+|.+++... ..+++..+..++.||+.||.|||++||+||||||+
T Consensus 71 ~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~ 150 (282)
T cd06636 71 HHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQ 150 (282)
T ss_pred CCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence 69999999999853 467899999999 5999998753 34888899999999999999999999999999999
Q ss_pred CEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHH
Q 000470 73 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 152 (1472)
Q Consensus 73 NILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~e 152 (1472)
||+++.++.++|+|||.+......... .....++..|+|||.+.... .....++.++|+|||||++||
T Consensus 151 nili~~~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~l~~~~-----~~~~~~~~~~DvwslG~~l~e 218 (282)
T cd06636 151 NVLLTENAEVKLVDFGVSAQLDRTVGR-------RNTFIGTPYWMAPEVIACDE-----NPDATYDYRSDIWSLGITAIE 218 (282)
T ss_pred HEEECCCCCEEEeeCcchhhhhccccC-------CCcccccccccCHhhcCccc-----CcCcCCCcccchhHHHHHHHH
Confidence 999999999999999987654221111 12344678899999875321 124567889999999999999
Q ss_pred HHhCCCCCCch-HHHHHHhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 153 LFLEVPFFELS-HLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 153 Lltg~~pf~~~-~~~~~~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|++|.+||... ....+...... .........+..+.+||.+||+.||.+||++.|+++|
T Consensus 219 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 219 MAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred HHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 99998888533 22222111111 1111223456789999999999999999999999988
No 302
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.93 E-value=3.2e-25 Score=257.55 Aligned_cols=193 Identities=18% Similarity=0.114 Sum_probs=156.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.++...|+||||++ ++|.+++... .+++.++..++.|++.||+|||+.|++|+||+|+||+++.+
T Consensus 59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~-~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~ 137 (277)
T cd06640 59 CDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAG-PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQ 137 (277)
T ss_pred CCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCC
Confidence 579999999999999999999999999 5999999765 48999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++........ ......++..|+|||.+. +..++.++|+|||||++|||++|.+|
T Consensus 138 ~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~apE~~~----------~~~~~~~~Dv~slG~il~el~tg~~p 200 (277)
T cd06640 138 GDVKLADFGVAGQLTDTQI-------KRNTFVGTPFWMAPEVIQ----------QSAYDSKADIWSLGITAIELAKGEPP 200 (277)
T ss_pred CCEEEcccccceeccCCcc-------ccccccCcccccCHhHhc----------cCCCccHHHHHHHHHHHHHHHHCCCC
Confidence 9999999998865422110 112234577799999764 33568899999999999999999999
Q ss_pred CCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|........... .....+.+....+..+.++|.+||+.+|++||+++++++|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 201 NSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 864432221111 1111223444456789999999999999999999999998
No 303
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.93 E-value=2.5e-25 Score=255.30 Aligned_cols=191 Identities=20% Similarity=0.186 Sum_probs=150.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.. ...|+||||++ |+|.+++...+ .++...+..++.||+.||+|||++||+||||||+|||++.
T Consensus 58 l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~ 136 (259)
T cd05037 58 LSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVAR 136 (259)
T ss_pred CCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEec
Confidence 579999999999888 77899999999 69999998765 6899999999999999999999999999999999999998
Q ss_pred CC-------cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 79 WN-------WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 79 ~~-------~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
++ .++|+|||.+...... ....++..|+|||.+... ...++.++||||+||++|
T Consensus 137 ~~~~~~~~~~~kl~Dfg~a~~~~~~-----------~~~~~~~~y~aPE~~~~~--------~~~~~~~~Di~slG~~~~ 197 (259)
T cd05037 137 YGLNEGYVPFIKLSDPGIPITVLSR-----------EERVERIPWIAPECIRNG--------QASLTIAADKWSFGTTLL 197 (259)
T ss_pred CccccCCceeEEeCCCCcccccccc-----------cccccCCCccChhhhcCC--------CCCcchhhHHHHHHHHHH
Confidence 87 7999999988754220 122345679999987521 136788999999999999
Q ss_pred HHHhC-CCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 152 ELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 152 eLltg-~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
||++| .+||........... +......+......+.++|.+||..+|++||++.++++.+
T Consensus 198 ~l~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 198 EICSNGEEPLSTLSSSEKERF-YQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred HHHhCCCCCcccCCchhHHHH-HhcCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 99995 777754322111110 0011112222236899999999999999999999999864
No 304
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.93 E-value=1.9e-25 Score=260.04 Aligned_cols=197 Identities=16% Similarity=0.099 Sum_probs=154.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvH~DLKpeNIL 75 (1472)
++||||+++++++..+...|++|||++|+|.+++.. ...+++..++.++.||+.||+|||++ +++||||||+||+
T Consensus 57 ~~~~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil 136 (283)
T cd06617 57 VDCPYTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVL 136 (283)
T ss_pred cCCCCeeeeeEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEE
Confidence 479999999999999999999999999999888753 34689999999999999999999997 9999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.+||+|||.+....... ......++..|+|||.+.... ....++.++|+||+||++|+|++
T Consensus 137 ~~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~------~~~~~~~~~Di~slG~~l~~l~~ 202 (283)
T cd06617 137 INRNGQVKLCDFGISGYLVDSV--------AKTIDAGCKPYMAPERINPEL------NQKGYDVKSDVWSLGITMIELAT 202 (283)
T ss_pred ECCCCCEEEeeccccccccccc--------ccccccCCccccChhhcCCcc------cccccCccccchhhHHHHHHHHh
Confidence 9999999999999886542110 011234577899999875321 12457889999999999999999
Q ss_pred CCCCCCch--HHHHHHhcCCCCCcccC-CCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELS--HLLAYRRGQYDPSQHLE-KIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~--~~~~~~~~~~~~~~~l~-~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|+.||... ....+..........++ ...+..++++|.+||..+|++||+++++++|
T Consensus 203 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 203 GRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 98888531 12222221111111122 2356789999999999999999999999988
No 305
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.93 E-value=4.6e-25 Score=255.36 Aligned_cols=198 Identities=20% Similarity=0.223 Sum_probs=157.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.....|+||||+. ++|.+++...+.+++..++.++.||+.||.|||++|++||||||+||+++.+
T Consensus 65 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~ 144 (272)
T cd06629 65 LDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDAD 144 (272)
T ss_pred cCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCC
Confidence 579999999999999999999999998 6999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++........ .......++..|+|||.+... ...++.++|+|||||++|+|++|.+|
T Consensus 145 ~~~~l~d~~~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~--------~~~~~~~~Dv~slG~~l~~l~~g~~p 211 (272)
T cd06629 145 GICKISDFGISKKSDDIYDN-----DQNMSMQGSVFWMAPEVIHSY--------SQGYSAKVDIWSLGCVVLEMFAGRRP 211 (272)
T ss_pred CeEEEeeccccccccccccc-----cccccccCCccccCHHHhccc--------cCCCCccchhHHHHHHHHHHHhCCCC
Confidence 99999999988754211110 011234467889999987522 12478899999999999999999888
Q ss_pred CCchHH-HHHHh---cCCC--CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHL-LAYRR---GQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~-~~~~~---~~~~--~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...+. ..+.. .... .........+..++++|.+||..+|++||+++++++|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 212 WSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 864332 22211 1111 1112223346789999999999999999999999998
No 306
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.93 E-value=1.5e-25 Score=258.22 Aligned_cols=192 Identities=20% Similarity=0.140 Sum_probs=156.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|+++||++ ++|.+++... ..+++..+..++.|++.||.|||+ .|++||||||+||+++
T Consensus 56 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~ 135 (265)
T cd06605 56 CNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN 135 (265)
T ss_pred CCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC
Confidence 479999999999999999999999999 6999999865 678999999999999999999999 9999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.+.....+.. ....++..|+|||.+. +..++.++||||+||++|+|++|.
T Consensus 136 ~~~~~~l~d~g~~~~~~~~~~---------~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~~l~~l~~g~ 196 (265)
T cd06605 136 SRGQIKLCDFGVSGQLVNSLA---------KTFVGTSSYMAPERIQ----------GNDYSVKSDIWSLGLSLIELATGR 196 (265)
T ss_pred CCCCEEEeecccchhhHHHHh---------hcccCChhccCHHHHc----------CCCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999998765422111 1144677899999764 236788999999999999999998
Q ss_pred CCCCch-----HHHHHH-hcCCCCCcccCCC-CCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELS-----HLLAYR-RGQYDPSQHLEKI-PDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~-----~~~~~~-~~~~~~~~~l~~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||... ...... .........++.. .+..++++|.+||..||++||++.|++.|
T Consensus 197 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 197 FPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 888543 222221 1111122223322 67789999999999999999999999998
No 307
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.93 E-value=3e-25 Score=258.13 Aligned_cols=196 Identities=16% Similarity=0.186 Sum_probs=155.7
Q ss_pred CCCCCcceeeEEEEe-CCeEEEEecccC-CcHHHHHhCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 000470 1 MSSTPCVHKKFWQET-DKAAYLLRQYFF-NSLRDRLSTP--------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 70 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~-~~~~~lV~Ey~~-gsL~d~l~~~--------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLK 70 (1472)
++||||+++++++.. +...++++||+. ++|.+++... ..+++.++..++.|++.||+|||++|++|||||
T Consensus 65 l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~ 144 (280)
T cd05043 65 LSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIA 144 (280)
T ss_pred CCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccC
Confidence 589999999998765 567899999998 7999998652 358999999999999999999999999999999
Q ss_pred CCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 71 CENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 71 peNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
|+||+++.++.+||+|||+++..... +.........++..|+|||.+. ...++.++|||||||++
T Consensus 145 p~nil~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~~l 209 (280)
T cd05043 145 ARNCVIDEELQVKITDNALSRDLFPM-----DYHCLGDNENRPVKWMALESLV----------NKEYSSASDVWSFGVLL 209 (280)
T ss_pred HhhEEEcCCCcEEECCCCCcccccCC-----ceEEeCCCCCcchhccCHHHHh----------cCCCCchhhHHHhHHHH
Confidence 99999999999999999998755321 1111122334566799999774 33578899999999999
Q ss_pred HHHHh-CCCCCCchHHHHHH---hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 151 AELFL-EVPFFELSHLLAYR---RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 151 ~eLlt-g~~pf~~~~~~~~~---~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
||+++ |++||.......+. ...+.. ..+...++.+.+++.+||..||++||++.++++.+.
T Consensus 210 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 274 (280)
T cd05043 210 WELMTLGQTPYVEIDPFEMAAYLKDGYRL--AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLT 274 (280)
T ss_pred HHHhcCCCCCcCcCCHHHHHHHHHcCCCC--CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 99998 89999654333322 222222 123345678999999999999999999999998754
No 308
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.93 E-value=3.7e-25 Score=255.14 Aligned_cols=196 Identities=20% Similarity=0.215 Sum_probs=155.4
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
+.||||+++++++.++ ...|++|||++ ++|.+++...+.+++..+..++.|++.||+|||++||+||||||+||+++
T Consensus 61 l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~ 140 (265)
T cd06652 61 LLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD 140 (265)
T ss_pred cCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec
Confidence 5799999999998763 57889999998 69999998777789999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.+............ .....++..|+|||.+. +..++.++|||||||++|||++|+
T Consensus 141 ~~~~~~l~Dfg~~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~~g~ 206 (265)
T cd06652 141 SVGNVKLGDFGASKRLQTICLSGTG----MKSVTGTPYWMSPEVIS----------GEGYGRKADIWSVGCTVVEMLTEK 206 (265)
T ss_pred CCCCEEECcCccccccccccccccc----cccCCCCccccChhhhc----------CCCCCcchhHHHHHHHHHHHhhCC
Confidence 9999999999988754322111111 12234678899999764 235688999999999999999999
Q ss_pred CCCCchH-HHHHHhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSH-LLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~-~~~~~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||.... ...+...... .....+...+..+.++|.+|+. +|++||+++|+++|
T Consensus 207 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 207 PPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred CCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 8886432 2222222222 2233444556789999999994 99999999999988
No 309
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=1.5e-25 Score=273.94 Aligned_cols=198 Identities=16% Similarity=0.169 Sum_probs=160.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--------------PFLSLVEKKWLAFQLLLAVKQCHEKGIC 65 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--------------~~l~~~~~~~i~~Qll~aL~~LH~~gIv 65 (1472)
|+|||||+|++++..++..|||+|||. |||.++|..+ +.|+..+...|+.||+.|++||-++.+|
T Consensus 546 l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FV 625 (774)
T KOG1026|consen 546 LQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFV 625 (774)
T ss_pred ccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCccc
Confidence 689999999999999999999999999 9999999542 2388999999999999999999999999
Q ss_pred ecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHH
Q 000470 66 HGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFA 145 (1472)
Q Consensus 66 H~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwS 145 (1472)
||||-..|+||.+.-.|||+|||+++.+|..+ +-.......-...|||||-+. .++++.++||||
T Consensus 626 HRDLATRNCLVge~l~VKIsDfGLsRdiYssD-----YYk~~~~t~lPIRWMppEsIl----------y~kFTteSDVWs 690 (774)
T KOG1026|consen 626 HRDLATRNCLVGENLVVKISDFGLSRDIYSSD-----YYKVRGNTLLPIRWMPPESIL----------YGKFTTESDVWS 690 (774)
T ss_pred ccchhhhhceeccceEEEecccccchhhhhhh-----hhcccCCceeeeecCCHHHhh----------cCcccchhhhhh
Confidence 99999999999999999999999999876432 111111112246799999876 458999999999
Q ss_pred HHHHHHHHHh-C-CCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 146 VGCVIAELFL-E-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 146 lG~il~eLlt-g-~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+|++|||+|+ | +|.|..++.+.+..........-+...+.++.+|+..||+.+|++||++.||-..++
T Consensus 691 ~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 691 FGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred hhhhhhhhhccccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 9999999998 5 455555543332221111113456778899999999999999999999999987754
No 310
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.93 E-value=2.8e-24 Score=253.51 Aligned_cols=315 Identities=19% Similarity=0.274 Sum_probs=233.3
Q ss_pred CCCccc-ccceeeeccccccceeEEEEcCCCC--EEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC
Q 000470 1041 DSGWRP-RGILVAHLQEHCSAVNEIAISHDHS--FFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH 1117 (1472)
Q Consensus 1041 ~~~W~p-~G~lV~~l~~H~~~V~~lafspd~~--~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~ 1117 (1472)
-..|+- .|.+.++|+||.+.|.++.|+|+-. .|++|+.|++|++||..+... +..+...|.+.|++++|.++
T Consensus 129 v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~t-----cl~~~~~H~S~vtsL~~~~d 203 (775)
T KOG0319|consen 129 VKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRT-----CLHTMILHKSAVTSLAFSED 203 (775)
T ss_pred EEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCch-----HHHHHHhhhhheeeeeeccC
Confidence 357995 6789999999999999999999765 689999999999999986432 34566678889999999999
Q ss_pred CCEEEEEeCCCcEEEEEcccccc-----------------C----C----------Cc----------------------
Q 000470 1118 SAQVVVGACDGIIHMFSVDHISR-----------------G----L----------GN---------------------- 1144 (1472)
Q Consensus 1118 ~~~las~s~DG~I~vwdv~~~~~-----------------~----~----------~~---------------------- 1144 (1472)
++.++++|.|..+.|||...... . . |.
T Consensus 204 ~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e 283 (775)
T KOG0319|consen 204 SLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEE 283 (775)
T ss_pred CceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchh
Confidence 99999999999999999852100 0 0 00
Q ss_pred -----------------------------------cccccC--------------------cccceeec---------CC
Q 000470 1145 -----------------------------------VEKYSG--------------------ISDIKKKD---------TK 1160 (1472)
Q Consensus 1145 -----------------------------------~~~~~~--------------------~~~~~~~~---------~~ 1160 (1472)
..+|+. ...+|.+. ..
T Consensus 284 ~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~G 363 (775)
T KOG0319|consen 284 IDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPG 363 (775)
T ss_pred hhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeC
Confidence 000000 00011111 11
Q ss_pred CCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc--cceeecCCCccceEEEEEcCCC-CEEEEEeCCCcEEEEE
Q 000470 1161 EGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN--TWTLKAIPEEGYVSSLVTGPCG-NWFVSGSSRGVLTLWD 1237 (1472)
Q Consensus 1161 ~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~--~~~l~~~~h~g~Itsl~~sp~g-~~LvsGssdG~I~lWD 1237 (1472)
|.+.|..+.... +|..|++|+.|.++++|-+..+.. ...-...+|.+.|.+++++..+ ..|+++|.|+++++|+
T Consensus 364 H~e~vlSL~~~~---~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~ 440 (775)
T KOG0319|consen 364 HTEAVLSLDVWS---SGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWD 440 (775)
T ss_pred chhheeeeeecc---cCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEec
Confidence 122222222111 256999999999999998843322 1122334589999999997755 7899999999999999
Q ss_pred CCCCccc--------ceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCC
Q 000470 1238 LRFLVPV--------NSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDT 1309 (1472)
Q Consensus 1238 lr~~~~i--------~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~ 1309 (1472)
++..+.. ......|...|+++.. .|+.. ++++|+.|.+.++|+++.+....+++
T Consensus 441 l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vai-a~ndk---------LiAT~SqDktaKiW~le~~~l~~vLs-------- 502 (775)
T KOG0319|consen 441 LPKSKETAFPIVLTCRYTERAHDKDINCVAI-APNDK---------LIATGSQDKTAKIWDLEQLRLLGVLS-------- 502 (775)
T ss_pred CCCcccccccceehhhHHHHhhcccccceEe-cCCCc---------eEEecccccceeeecccCceEEEEee--------
Confidence 9862211 1123346667888888 76654 89999999999999999777766665
Q ss_pred ccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCCCCCCceEE
Q 000470 1310 EMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCI 1388 (1472)
Q Consensus 1310 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv 1388 (1472)
+|..+|+|+.|++.. .++|++.|++|++|.+.+.++...+
T Consensus 503 ---------------------------------------GH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~ 543 (775)
T KOG0319|consen 503 ---------------------------------------GHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTF 543 (775)
T ss_pred ---------------------------------------CCccceEEEEeccccceeEeccCCceEEEEEeccceeeeee
Confidence 456699999999987 6669999999999999988887766
Q ss_pred eCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceE
Q 000470 1389 CGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAI 1468 (1472)
Q Consensus 1389 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~I 1468 (1472)
.| |..+|.-+. |-.+|..|+||+.||.|
T Consensus 544 eG---------------------------------------------------H~~aVlra~-F~~~~~qliS~~adGli 571 (775)
T KOG0319|consen 544 EG---------------------------------------------------HTSAVLRAS-FIRNGKQLISAGADGLI 571 (775)
T ss_pred cC---------------------------------------------------ccceeEeee-eeeCCcEEEeccCCCcE
Confidence 65 889999885 87889999999999999
Q ss_pred EEcC
Q 000470 1469 KVWK 1472 (1472)
Q Consensus 1469 kVWk 1472 (1472)
|||+
T Consensus 572 KlWn 575 (775)
T KOG0319|consen 572 KLWN 575 (775)
T ss_pred EEEe
Confidence 9995
No 311
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.93 E-value=4.5e-25 Score=252.71 Aligned_cols=195 Identities=18% Similarity=0.159 Sum_probs=156.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.+++..|++|||++ ++|.+++..... +++.++..++.|++.||.+||+.|++||||||+||+++
T Consensus 58 l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~ 137 (258)
T smart00219 58 LDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG 137 (258)
T ss_pred cCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc
Confidence 479999999999999999999999998 599999976443 89999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
+++.++|+|||.++....... + ......++..|+|||.+. ...++.++||||+||++|+|++ |
T Consensus 138 ~~~~~~l~dfg~~~~~~~~~~----~--~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Di~slG~i~~~l~~~g 201 (258)
T smart00219 138 ENLVVKISDFGLSRDLYDDDY----Y--KKKGGKLPIRWMAPESLK----------DGKFTSKSDVWSFGVLLWEIFTLG 201 (258)
T ss_pred cCCeEEEcccCCceecccccc----c--ccccCCCcccccChHHhc----------cCCCCcchhHHHHHHHHHHHHhCC
Confidence 999999999999876532211 0 001122567899999763 3457889999999999999998 6
Q ss_pred CCCCCchHHHHHH-hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELSHLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+||.......+. ..........+...+..+.+++.+||..||++|||+.|+++.
T Consensus 202 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 202 ESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 8888654333221 111111222344467889999999999999999999999975
No 312
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.93 E-value=3.7e-25 Score=254.48 Aligned_cols=194 Identities=23% Similarity=0.201 Sum_probs=159.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ ++|.+++.....+++..+..++.|++.||+|||+ .|++||||+|+||+++.
T Consensus 56 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~ 135 (264)
T cd06623 56 CESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS 135 (264)
T ss_pred cCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECC
Confidence 579999999999999999999999999 6999999887789999999999999999999999 99999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.+......... .....++..|+|||.+. ...++.++|+|||||++|+|++|.+
T Consensus 136 ~~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~~l~tg~~ 198 (264)
T cd06623 136 KGEVKIADFGISKVLENTLDQ-------CNTFVGTVTYMSPERIQ----------GESYSYAADIWSLGLTLLECALGKF 198 (264)
T ss_pred CCCEEEccCccceecccCCCc-------ccceeecccccCHhhhC----------CCCCCchhhHHHHHHHHHHHHhCCC
Confidence 999999999988765322111 12334678899999764 2367889999999999999999998
Q ss_pred CCCchH---HHHHH-hcCCCCCcccCCC-CCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSH---LLAYR-RGQYDPSQHLEKI-PDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~---~~~~~-~~~~~~~~~l~~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||.... ..... .........++.. .+..+.++|.+||..+|++||++.|+++|
T Consensus 199 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 199 PFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 886542 22211 1112222233444 67789999999999999999999999998
No 313
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.93 E-value=4.4e-25 Score=259.07 Aligned_cols=198 Identities=13% Similarity=0.085 Sum_probs=152.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-----------FLSLVEKKWLAFQLLLAVKQCHEKGICHGD 68 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-----------~l~~~~~~~i~~Qll~aL~~LH~~gIvH~D 68 (1472)
++||||+++++++..+...|++|||+. ++|.+++.... .+++.++..++.|++.||+|||++||+|||
T Consensus 76 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d 155 (296)
T cd05095 76 LKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRD 155 (296)
T ss_pred CCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence 589999999999999999999999998 69999987632 366788999999999999999999999999
Q ss_pred CCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHH
Q 000470 69 IKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGC 148 (1472)
Q Consensus 69 LKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~ 148 (1472)
|||+|||++.++.++|+|||+++....... ........++..|+|||... ...++.++|||||||
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~----------~~~~~~~~DiwSlG~ 220 (296)
T cd05095 156 LATRNCLVGKNYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMSWESIL----------LGKFTTASDVWAFGV 220 (296)
T ss_pred CChheEEEcCCCCEEeccCcccccccCCcc-----eeccCcCcCccccCCHHHHh----------cCCccchhhhhHHHH
Confidence 999999999999999999999875422110 01112223356799999654 346788999999999
Q ss_pred HHHHHHh--CCCCCCchHHHHHHh--------cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 149 VIAELFL--EVPFFELSHLLAYRR--------GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 149 il~eLlt--g~~pf~~~~~~~~~~--------~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
++|||++ |..||......+... .........+...++.+++|+.+||+.||++||++.|+++.++
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 221 TLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 9999998 567775332222111 1111111223345678999999999999999999999998753
No 314
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=5.1e-24 Score=220.62 Aligned_cols=251 Identities=20% Similarity=0.281 Sum_probs=202.5
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCc
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1129 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~ 1129 (1472)
....|..|+++|..+.|+-||+|.+||+.|.+||+|+..++. ...+|.+|+..|.+++.+.+...|++|+.|..
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~------liktYsghG~EVlD~~~s~Dnskf~s~GgDk~ 82 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGA------LIKTYSGHGHEVLDAALSSDNSKFASCGGDKA 82 (307)
T ss_pred hceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccc------eeeeecCCCceeeeccccccccccccCCCCce
Confidence 356788999999999999999999999999999999998876 56799999999999999999999999999999
Q ss_pred EEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC--ccceeecCC
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS--NTWTLKAIP 1207 (1472)
Q Consensus 1130 I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~--~~~~l~~~~ 1207 (1472)
|.+||+.+ |+ ..|++ ..|...|+.+.|+.+ ..++++|+-|.++++||.|+.. +++.+..
T Consensus 83 v~vwDV~T-----Gk--------v~Rr~-rgH~aqVNtV~fNee---sSVv~SgsfD~s~r~wDCRS~s~ePiQilde-- 143 (307)
T KOG0316|consen 83 VQVWDVNT-----GK--------VDRRF-RGHLAQVNTVRFNEE---SSVVASGSFDSSVRLWDCRSRSFEPIQILDE-- 143 (307)
T ss_pred EEEEEccc-----Ce--------eeeec-ccccceeeEEEecCc---ceEEEeccccceeEEEEcccCCCCccchhhh--
Confidence 99999985 21 12332 356778899999987 4599999999999999999864 5566654
Q ss_pred CccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEE
Q 000470 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1287 (1472)
Q Consensus 1208 h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~ 1287 (1472)
..+.|.++.+. ++-+++|+.||+++.||+|.+.....+- ..||+++++ +++++ ..++++-++.++
T Consensus 144 a~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~sDy~---g~pit~vs~-s~d~n---------c~La~~l~stlr 208 (307)
T KOG0316|consen 144 AKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSSDYF---GHPITSVSF-SKDGN---------CSLASSLDSTLR 208 (307)
T ss_pred hcCceeEEEec--ccEEEeeccCCcEEEEEeecceeehhhc---CCcceeEEe-cCCCC---------EEEEeeccceee
Confidence 56778888876 6789999999999999999988765432 348999999 77665 788899999999
Q ss_pred EEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCCcEEE
Q 000470 1288 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLT 1367 (1472)
Q Consensus 1288 VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~llT 1367 (1472)
+.|-++|+..+.+..+... .| .+.|..-..+..+++
T Consensus 209 LlDk~tGklL~sYkGhkn~-------------------------------ey-------------kldc~l~qsdthV~s 244 (307)
T KOG0316|consen 209 LLDKETGKLLKSYKGHKNM-------------------------------EY-------------KLDCCLNQSDTHVFS 244 (307)
T ss_pred ecccchhHHHHHhcccccc-------------------------------ee-------------eeeeeecccceeEEe
Confidence 9999999988777643220 01 123332223447889
Q ss_pred ccCCCeEEEEeCCCCCC
Q 000470 1368 GGTDLKIRRWDHCSPGR 1384 (1472)
Q Consensus 1368 gg~Dg~IrlWDl~~~~~ 1384 (1472)
|++||.|.+||+.+...
T Consensus 245 gSEDG~Vy~wdLvd~~~ 261 (307)
T KOG0316|consen 245 GSEDGKVYFWDLVDETQ 261 (307)
T ss_pred ccCCceEEEEEecccee
Confidence 99999999999976543
No 315
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.93 E-value=1.5e-25 Score=268.00 Aligned_cols=197 Identities=21% Similarity=0.306 Sum_probs=152.7
Q ss_pred CCCCCcceeeEEEEeC-----CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETD-----KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~-----~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++... ...|+++||+.++|.+++..+ .+++..++.++.|++.||+|||++||+||||||+||+
T Consensus 60 l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nil 138 (336)
T cd07849 60 FKHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQ-HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLL 138 (336)
T ss_pred CCCCCcCchhheeecccccccceEEEEehhcccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEE
Confidence 5799999999887654 358999999999999988664 5899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++..+.++|+|||+++.......... ......++..|+|||.+.. ...++.++||||+||++|+|++
T Consensus 139 l~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslGvil~el~~ 205 (336)
T cd07849 139 LNTNCDLKICDFGLARIADPEHDHTG----FLTEYVATRWYRAPEIMLN---------SKGYTKAIDIWSVGCILAEMLS 205 (336)
T ss_pred ECCCCCEEECcccceeeccccccccC----CcCCcCcCCCccChHHhhC---------CCCCCcHHHHHHHHHHHHHHHh
Confidence 99999999999999876533221111 2233457888999997642 2356889999999999999999
Q ss_pred CCCCCCchHHHH----HHh------------------------cCCCCCc---ccCCCCCHHHHHHHHHhcccCcCCCCC
Q 000470 156 EVPFFELSHLLA----YRR------------------------GQYDPSQ---HLEKIPDSGIRKMILHMIQLEPELRFS 204 (1472)
Q Consensus 156 g~~pf~~~~~~~----~~~------------------------~~~~~~~---~l~~~~~~~l~~LI~~mL~~dP~~Rps 204 (1472)
|++||....... +.. ....... ......++.+.++|.+||+.||++||+
T Consensus 206 G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt 285 (336)
T cd07849 206 NRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRIT 285 (336)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcC
Confidence 999996432211 000 0000000 011223567999999999999999999
Q ss_pred HHHHHHH
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~elL~~ 211 (1472)
+.|+++|
T Consensus 286 ~~e~l~h 292 (336)
T cd07849 286 VEEALAH 292 (336)
T ss_pred HHHHhcC
Confidence 9999999
No 316
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.93 E-value=5.4e-25 Score=259.78 Aligned_cols=193 Identities=21% Similarity=0.203 Sum_probs=154.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+|+||+.|+|.+.+.. ...+++.++..++.||+.||.|||+.||+||||+|+||+++.+
T Consensus 72 l~h~niv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~ 151 (307)
T cd06607 72 LRHPNTIEYKGCYLREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEP 151 (307)
T ss_pred CCCCCEEEEEEEEEeCCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCC
Confidence 579999999999999999999999999998888754 4568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++...... ....++..|+|||.+... ....++.++||||+||++|||++|.+|
T Consensus 152 ~~~kL~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~-------~~~~~~~~sDv~s~G~il~el~tg~~p 213 (307)
T cd06607 152 GTVKLADFGSASLVSPA-----------NSFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPP 213 (307)
T ss_pred CCEEEeecCcceecCCC-----------CCccCCccccCceeeecc-------CCCCCCcccchHHHHHHHHHHHcCCCC
Confidence 99999999987643211 123457789999987421 134578899999999999999999888
Q ss_pred CCchHHHH-HHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLA-YRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~-~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|....... ... .............+..++++|.+||..||++||++.+++.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 214 LFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 86443222 111 11111111122346789999999999999999999999987
No 317
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.93 E-value=5.7e-25 Score=253.95 Aligned_cols=200 Identities=15% Similarity=0.063 Sum_probs=154.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++.+++......|+||||++ ++|.+++.. .+.+++.++..++.|++.||+|||+.|++||||||+||+++.
T Consensus 63 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~ 142 (268)
T cd05063 63 FSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNS 142 (268)
T ss_pred CCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcC
Confidence 579999999999999999999999999 699999975 356899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||++........ .. ........+..|+|||.+. ...++.++||||+||++|||++ |.
T Consensus 143 ~~~~kl~dfg~~~~~~~~~~--~~--~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~il~ell~~g~ 208 (268)
T cd05063 143 NLECKVSDFGLSRVLEDDPE--GT--YTTSGGKIPIRWTAPEAIA----------YRKFTSASDVWSFGIVMWEVMSFGE 208 (268)
T ss_pred CCcEEECCCccceecccccc--cc--eeccCCCcCceecCHHHhh----------cCCcChHhHHHHHHHHHHHHHhCCC
Confidence 99999999998865432111 11 1111112245699999764 2356889999999999999997 88
Q ss_pred CCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 158 PFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.||............ ...........+..+.+++.+||+.+|++||++.++++.+..
T Consensus 209 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 209 RPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred CCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 888533222221111 111111223346789999999999999999999999988654
No 318
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.93 E-value=3.2e-23 Score=236.07 Aligned_cols=365 Identities=14% Similarity=0.138 Sum_probs=248.2
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCc
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1129 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~ 1129 (1472)
.-.++.+|..-|+++.|+|||.+|||+|.||+|.++|-.++|+...+.. -.+|.+.|.+++|+|++..|++++.|.+
T Consensus 182 Fk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~---~~aHkGsIfalsWsPDs~~~~T~SaDkt 258 (603)
T KOG0318|consen 182 FKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELED---SDAHKGSIFALSWSPDSTQFLTVSADKT 258 (603)
T ss_pred eeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecC---CCCccccEEEEEECCCCceEEEecCCce
Confidence 4567889999999999999999999999999999999999986544332 3478889999999999999999999999
Q ss_pred EEEEEccccccCCCccccccCcccceeecCC---CCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecC
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDTK---EGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1206 (1472)
Q Consensus 1130 I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~ 1206 (1472)
++|||+.+. +.++.+... +...+-|+ |-.+ .|++.+.+|.|..++...+.....+.+
T Consensus 259 ~KIWdVs~~-------------slv~t~~~~~~v~dqqvG~l-Wqkd-----~lItVSl~G~in~ln~~d~~~~~~i~G- 318 (603)
T KOG0318|consen 259 IKIWDVSTN-------------SLVSTWPMGSTVEDQQVGCL-WQKD-----HLITVSLSGTINYLNPSDPSVLKVISG- 318 (603)
T ss_pred EEEEEeecc-------------ceEEEeecCCchhceEEEEE-EeCC-----eEEEEEcCcEEEEecccCCChhheecc-
Confidence 999999841 122222221 22344455 4443 899999999999999999998888877
Q ss_pred CCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000470 1207 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1286 (1472)
Q Consensus 1207 ~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V 1286 (1472)
|...|++++.+|++.+|++|+.||.|.-||...+..-+.....|...|.++.. +..+ .+++.+.|+.+
T Consensus 319 -HnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~-~~~~----------~~~t~g~Dd~l 386 (603)
T KOG0318|consen 319 -HNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAA-SESG----------ELFTIGWDDTL 386 (603)
T ss_pred -cccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEee-cCCC----------cEEEEecCCeE
Confidence 99999999999999999999999999999999888776665667778888876 3222 47889999999
Q ss_pred EEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccc--ccccccc-cccCCC--CCCcCCceEeccCC
Q 000470 1287 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRN--VNQKYRV-DELNEP--PPRLLGIRSLLPLP 1361 (1472)
Q Consensus 1287 ~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~~~~-~~l~~~--~~~~~~V~sl~~~p 1361 (1472)
++.++....+-..... .... ||........+...- ...+..+ ...... ........+++++|
T Consensus 387 ~~~~~~~~~~t~~~~~-~lg~------------QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~ 453 (603)
T KOG0318|consen 387 RVISLKDNGYTKSEVV-KLGS------------QPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSP 453 (603)
T ss_pred EEEecccCccccccee-ecCC------------CceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcC
Confidence 9998865433221110 0000 111100000000000 0000000 000000 01122467888999
Q ss_pred CC-cEEEccCCCeEEEEeCCCCCCceE-EeCCCCCCCCCCcceEEeecCceEEEEeeecCCcc--hhhhhHHHHhhhhcC
Q 000470 1362 GG-DLLTGGTDLKIRRWDHCSPGRSYC-ICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLT--SKLTAKAVLAAAATD 1437 (1472)
Q Consensus 1362 ~g-~llTgg~Dg~IrlWDl~~~~~s~v-v~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~~~ 1437 (1472)
++ .++.||.|++|+++.+...+.... ..- .+....++...+.++..+......+-.. ...++. ....
T Consensus 454 ~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~----~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~-----~~~~ 524 (603)
T KOG0318|consen 454 DGSEVAVGGQDGKVHVYSLSGDELKEEAKLL----EHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASRE-----VKTN 524 (603)
T ss_pred CCCEEEEecccceEEEEEecCCcccceeeee----cccCCceEEEECCCCcEEEEeccCCcEEEEEcccCc-----eecc
Confidence 98 677999999999999987553211 111 1223556666666665554332111000 000000 0122
Q ss_pred CCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1438 SAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1438 ~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
....|+..|++|| |+|+..+++|||-|-.|.||.
T Consensus 525 ~w~FHtakI~~~a-WsP~n~~vATGSlDt~Viiys 558 (603)
T KOG0318|consen 525 RWAFHTAKINCVA-WSPNNKLVATGSLDTNVIIYS 558 (603)
T ss_pred eeeeeeeeEEEEE-eCCCceEEEeccccceEEEEE
Confidence 3345999999997 999999999999999999994
No 319
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.93 E-value=4e-25 Score=258.24 Aligned_cols=198 Identities=17% Similarity=0.096 Sum_probs=152.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------------------CCCCHHHHHHHHHHHHHHHH
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------------PFLSLVEKKWLAFQLLLAVK 57 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------------------~~l~~~~~~~i~~Qll~aL~ 57 (1472)
++||||+++++++..+...|++|||++ |+|.+++... ..+++.++..++.||+.||.
T Consensus 65 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~ 144 (288)
T cd05050 65 FDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMA 144 (288)
T ss_pred cCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999 6999999642 23778889999999999999
Q ss_pred HHHHCCCeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCC
Q 000470 58 QCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPL 137 (1472)
Q Consensus 58 ~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~ 137 (1472)
|||++|++||||||+||+++.++.++|+|||.+.......... .......+..|+|||.+. ...+
T Consensus 145 ~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~----------~~~~ 209 (288)
T cd05050 145 YLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK-----ASENDAIPIRWMPPESIF----------YNRY 209 (288)
T ss_pred HHHhCCeecccccHhheEecCCCceEECccccceecccCcccc-----ccCCCccChhhcCHHHHh----------cCCC
Confidence 9999999999999999999999999999999887543221100 011222345699999764 3467
Q ss_pred CccchHHHHHHHHHHHHh-CCCCCCchHHHH-HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 138 KPSMDIFAVGCVIAELFL-EVPFFELSHLLA-YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 138 t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+.++|||||||++|||++ |..||....... ............+...+..+.+||.+||+.||++||++.|+++.++
T Consensus 210 ~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 210 TTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 889999999999999997 766664322112 1111111111223445678999999999999999999999998753
No 320
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.93 E-value=2.1e-25 Score=264.02 Aligned_cols=198 Identities=23% Similarity=0.280 Sum_probs=152.6
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLST-----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~-----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeN 73 (1472)
++||||+++++++... ...|+||||++++|.+.+.. ...+++.+++.++.||+.||.|||++||+||||||+|
T Consensus 59 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~N 138 (316)
T cd07842 59 LKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPAN 138 (316)
T ss_pred cCCCCccceEEEEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHH
Confidence 5899999999999988 88999999999988887743 2368999999999999999999999999999999999
Q ss_pred EEEcc----CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 74 VLVTS----WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 74 ILv~~----~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
|+++. .+.+||+|||+++........ ........++..|+|||.+.. ...++.++|||||||+
T Consensus 139 il~~~~~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~ 205 (316)
T cd07842 139 ILVMGEGPERGVVKIGDLGLARLFNAPLKP----LADLDPVVVTIWYRAPELLLG---------ARHYTKAIDIWAIGCI 205 (316)
T ss_pred EEEcCCCCccceEEECCCccccccCCCccc----ccccCCccccccccCHHHHhC---------CCCCCcHHHHHHHHHH
Confidence 99999 899999999988765332211 111123456788999997642 2356889999999999
Q ss_pred HHHHHhCCCCCCchHHHH-------------H---------------------Hh---cCCCCC---cc----cC--CCC
Q 000470 150 IAELFLEVPFFELSHLLA-------------Y---------------------RR---GQYDPS---QH----LE--KIP 183 (1472)
Q Consensus 150 l~eLltg~~pf~~~~~~~-------------~---------------------~~---~~~~~~---~~----l~--~~~ 183 (1472)
+|+|++|.+||....... . .. ...... .. .. ...
T Consensus 206 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (316)
T cd07842 206 FAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKP 285 (316)
T ss_pred HHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCC
Confidence 999999999986322110 0 00 000000 00 00 134
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 184 DSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 184 ~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+..+.++|.+||+.||++|||+.|+++|
T Consensus 286 ~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 286 DSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 5679999999999999999999999998
No 321
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.93 E-value=4.8e-25 Score=257.13 Aligned_cols=198 Identities=16% Similarity=0.175 Sum_probs=153.6
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||+++++++... ...|+||||++ ++|.+++... ..+++.++..++.||+.||+|||++||+||||||+||++
T Consensus 63 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~ 142 (284)
T cd05079 63 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV 142 (284)
T ss_pred CCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEE
Confidence 5799999999998875 57899999998 6999999664 358999999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++.++|+|||.++....... .........++..|+|||.+. +..++.++|||||||++|||+++
T Consensus 143 ~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~il~ellt~ 208 (284)
T cd05079 143 ESEHQVKIGDFGLTKAIETDKE----YYTVKDDLDSPVFWYAPECLI----------QSKFYIASDVWSFGVTLYELLTY 208 (284)
T ss_pred cCCCCEEECCCccccccccCcc----ceeecCCCCCCccccCHHHhc----------cCCCCccccchhhhhhhhhhhcC
Confidence 9999999999999876532211 111223455677899999764 33578899999999999999998
Q ss_pred CCCCCchH--H----------------HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 157 VPFFELSH--L----------------LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 157 ~~pf~~~~--~----------------~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
..++.... . ....... .....+...+..+.+|+.+||+.||++||++++++++++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 209 CDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG--KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred CCCCccccchhhhhcccccccccHHHHHHHHHcC--ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 55442110 0 0000100 1111233456789999999999999999999999998654
No 322
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.93 E-value=4.2e-25 Score=258.38 Aligned_cols=196 Identities=20% Similarity=0.223 Sum_probs=158.3
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++.+++.+...|+||||++ ++|.+++..+..+++.++..++.||+.||.|||++|++||||||+|||++.++
T Consensus 63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~ 142 (290)
T cd05613 63 QSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG 142 (290)
T ss_pred cCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC
Confidence 58999999999999999999999999 69999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++........ ......++..|+|||.+... ...++.++||||+||++|+|++|.+||
T Consensus 143 ~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~Dv~slG~~l~~ll~g~~p~ 208 (290)
T cd05613 143 HVVLTDFGLSKEFHEDEVE------RAYSFCGTIEYMAPDIVRGG--------DGGHDKAVDWWSMGVLMYELLTGASPF 208 (290)
T ss_pred CEEEeeCccceeccccccc------ccccccCCcccCChhhccCC--------CCCCCccccHHHHHHHHHHHhcCCCCC
Confidence 9999999988754211110 11234467889999987521 234678899999999999999999888
Q ss_pred Cch----HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 161 ELS----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 161 ~~~----~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
... ....+...........+...++.+.+++.+||+.||++|| +++++++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 209 TVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred CcCCccccHHHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 532 2223322222222234555678899999999999999997 88999988
No 323
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.93 E-value=2.6e-25 Score=265.94 Aligned_cols=202 Identities=17% Similarity=0.209 Sum_probs=157.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
++||||+++++++..+...|+||||+.|+|.+++..+..+++..+..++.||+.||+|||++||+||||||+||+++..+
T Consensus 77 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~ 156 (335)
T PTZ00024 77 IKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKG 156 (335)
T ss_pred CCCcceeeeeEEEecCCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCC
Confidence 57999999999999999999999999999999998888899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCC-------CCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHH
Q 000470 81 WLYLSDFASFKPTYIPYDDPS-------DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~-------~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 153 (1472)
.++|+|||.++....+..... ..........++..|+|||.+.+ ...++.++||||+||++|||
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~el 227 (335)
T PTZ00024 157 ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG---------AEKYHFAVDMWSVGCIFAEL 227 (335)
T ss_pred CEEECCccceeecccccccccccccccccccccccccccccCCCCChhccc---------CCCCCcHHHHHHHHHHHHHH
Confidence 999999998875531110000 00111122345778999997742 22468899999999999999
Q ss_pred HhCCCCCCchHHHH----HHh--c-CCCC------------------Cc---ccCCCCCHHHHHHHHHhcccCcCCCCCH
Q 000470 154 FLEVPFFELSHLLA----YRR--G-QYDP------------------SQ---HLEKIPDSGIRKMILHMIQLEPELRFSA 205 (1472)
Q Consensus 154 ltg~~pf~~~~~~~----~~~--~-~~~~------------------~~---~l~~~~~~~l~~LI~~mL~~dP~~Rpsa 205 (1472)
++|.+||....... ... + .... .. ......+..+.++|.+||+.||++||++
T Consensus 228 ~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~ 307 (335)
T PTZ00024 228 LTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISA 307 (335)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCH
Confidence 99999996433111 110 0 0000 00 0112335779999999999999999999
Q ss_pred HHHHHH
Q 000470 206 ESYLQN 211 (1472)
Q Consensus 206 ~elL~~ 211 (1472)
+|++.|
T Consensus 308 ~~~l~~ 313 (335)
T PTZ00024 308 KEALKH 313 (335)
T ss_pred HHHhcC
Confidence 999998
No 324
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.92 E-value=4.1e-25 Score=256.24 Aligned_cols=197 Identities=18% Similarity=0.152 Sum_probs=155.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC---------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP---------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 70 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~---------~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLK 70 (1472)
++||||+++++++..+...|+||||++ |+|.+++.... .+++.++..++.||+.||+|||++||+|||||
T Consensus 65 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlk 144 (275)
T cd05046 65 LSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLA 144 (275)
T ss_pred cCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCc
Confidence 579999999999999999999999999 79999997654 68999999999999999999999999999999
Q ss_pred CCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 71 CENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 71 peNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
|+||+++.++.++|+|||.++...... ........++..|+|||.+. +...+.++|||||||++
T Consensus 145 p~Nili~~~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l 208 (275)
T cd05046 145 ARNCLVSSQREVKVSLLSLSKDVYNSE------YYKLRNALIPLRWLAPEAVQ----------EDDFSTKSDVWSFGVLM 208 (275)
T ss_pred cceEEEeCCCcEEEcccccccccCccc------ccccCCceeEEeecChhhhc----------cCCCCchhhHHHHHHHH
Confidence 999999999999999999876442111 11122333466799999764 23467889999999999
Q ss_pred HHHHh-CCCCCCchHHHHHHhcCC--CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 151 AELFL-EVPFFELSHLLAYRRGQY--DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 151 ~eLlt-g~~pf~~~~~~~~~~~~~--~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|+|++ |.+||.......+..... ......+...+..+.+++.+||+.||++||++.|+++.+.
T Consensus 209 ~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 209 WEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 99998 677885322222111111 1111223445678999999999999999999999998753
No 325
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.92 E-value=6.7e-25 Score=255.11 Aligned_cols=198 Identities=14% Similarity=0.121 Sum_probs=157.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.. ...|+||||++ |+|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+++.
T Consensus 66 l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~ 144 (279)
T cd05057 66 VDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKT 144 (279)
T ss_pred CCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcC
Confidence 579999999999987 78899999998 7999999763 46899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.++....... ........++..|+|||.+. ...++.++|+||+||++||+++ |.
T Consensus 145 ~~~~kL~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~el~~~g~ 209 (279)
T cd05057 145 PQHVKITDFGLAKLLDVDEK-----EYHAEGGKVPIKWMALESIL----------HRIYTHKSDVWSYGVTVWELMTFGA 209 (279)
T ss_pred CCeEEECCCcccccccCccc-----ceecCCCcccccccCHHHhh----------cCCcCchhhHHHHHHHHHHHhcCCC
Confidence 99999999999876532111 11112223356799999764 3357889999999999999998 89
Q ss_pred CCCCchHHHHHHhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 158 PFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
+||.......+...... .....+...+..+.+++.+||..||.+||++.++++.+..
T Consensus 210 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~ 267 (279)
T cd05057 210 KPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSK 267 (279)
T ss_pred CCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 99975443332221111 1122344566789999999999999999999999987653
No 326
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.92 E-value=6.7e-25 Score=253.80 Aligned_cols=193 Identities=18% Similarity=0.185 Sum_probs=153.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++++ ...|+||||++ |+|.+++... ..+++..+..++.|++.||+|||++|++||||||+||+++.
T Consensus 64 ~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~ 142 (270)
T cd05056 64 FDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS 142 (270)
T ss_pred CCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec
Confidence 579999999999876 45789999998 6999999764 35899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeec-cCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFD-TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~-~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
++.++|+|||.++..... ..+.. ...++..|+|||.+. ...++.++|||||||++|||++ |
T Consensus 143 ~~~~~l~d~g~~~~~~~~-------~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~~~g 205 (270)
T cd05056 143 PDCVKLGDFGLSRYLEDE-------SYYKASKGKLPIKWMAPESIN----------FRRFTSASDVWMFGVCMWEILMLG 205 (270)
T ss_pred CCCeEEccCceeeecccc-------cceecCCCCccccccChhhhc----------cCCCCchhhhHHHHHHHHHHHHcC
Confidence 999999999988755221 11111 222345799999764 3357889999999999999986 8
Q ss_pred CCCCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 157 VPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 157 ~~pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.+||....... +..+.. ...+...+..++++|.+|+..+|++||++.++++.+..
T Consensus 206 ~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~ 264 (270)
T cd05056 206 VKPFQGVKNNDVIGRIENGER---LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSD 264 (270)
T ss_pred CCCCCCCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 88886443222 222221 12344556789999999999999999999999988653
No 327
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.92 E-value=5.1e-25 Score=253.23 Aligned_cols=196 Identities=15% Similarity=0.086 Sum_probs=154.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||++++++++.+...|+||||++ ++|.+++.... .+++.++..++.|++.||.|||++||+||||||+||+++
T Consensus 58 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~ 137 (261)
T cd05034 58 LRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG 137 (261)
T ss_pred CCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc
Confidence 579999999999999899999999998 69999997643 589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
+++.++|+|||.++........ .......+..|+|||.+. +..++.++||||+||++|+|++ |
T Consensus 138 ~~~~~~l~d~g~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~il~~l~t~g 201 (261)
T cd05034 138 ENLVCKIADFGLARLIEDDEYT------AREGAKFPIKWTAPEAAN----------YGRFTIKSDVWSFGILLTEIVTYG 201 (261)
T ss_pred CCCCEEECccccceeccchhhh------hhhccCCCccccCHHHhc----------cCCcCchhHHHHHHHHHHHHHhCC
Confidence 9999999999988755321100 001122346799999764 3457889999999999999998 8
Q ss_pred CCCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
++||........ ...........+...+..+++++.+||..+|++||+++++++-+
T Consensus 202 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l 258 (261)
T cd05034 202 RVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFL 258 (261)
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHH
Confidence 999965432221 11111111222334467899999999999999999999998754
No 328
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.92 E-value=2.3e-25 Score=266.56 Aligned_cols=195 Identities=22% Similarity=0.319 Sum_probs=154.9
Q ss_pred CCCCCcceeeEEEEeC-----CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETD-----KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~-----~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++... ...|+++||+.++|.+++...+.+++.+++.++.|++.||.|||++|++||||||+||+
T Consensus 61 l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil 140 (337)
T cd07858 61 LDHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLL 140 (337)
T ss_pred cCCCCccchHHheecccccccCcEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEE
Confidence 5799999999988654 35899999999999999988888999999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||+++...... .......++..|+|||.+.. ...++.++|||||||++|+|++
T Consensus 141 ~~~~~~~kL~Dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~~l~~ 204 (337)
T cd07858 141 LNANCDLKICDFGLARTTSEKG-------DFMTEYVVTRWYRAPELLLN---------CSEYTTAIDVWSVGCIFAELLG 204 (337)
T ss_pred EcCCCCEEECcCccccccCCCc-------ccccccccccCccChHHHhc---------CCCCCCcccHHHHHHHHHHHHc
Confidence 9999999999999987653221 11223446788999998752 1247789999999999999999
Q ss_pred CCCCCCchHHHH---------------------------HHhcC-CCCC---cccCCCCCHHHHHHHHHhcccCcCCCCC
Q 000470 156 EVPFFELSHLLA---------------------------YRRGQ-YDPS---QHLEKIPDSGIRKMILHMIQLEPELRFS 204 (1472)
Q Consensus 156 g~~pf~~~~~~~---------------------------~~~~~-~~~~---~~l~~~~~~~l~~LI~~mL~~dP~~Rps 204 (1472)
|++||...+... +.+.. .... .......++.+++||.+||+.||++||+
T Consensus 205 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps 284 (337)
T cd07858 205 RKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRIT 284 (337)
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccC
Confidence 999996432110 00000 0000 1112235678999999999999999999
Q ss_pred HHHHHHH
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~elL~~ 211 (1472)
++|+++|
T Consensus 285 ~~ell~h 291 (337)
T cd07858 285 VEEALAH 291 (337)
T ss_pred HHHHHcC
Confidence 9999999
No 329
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.92 E-value=4.8e-25 Score=281.61 Aligned_cols=203 Identities=16% Similarity=0.188 Sum_probs=152.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGD 68 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~D 68 (1472)
++||||+++++++.+++..|++|||++ |+|.+++... ..++...+..++.||+.||+|||++||+|||
T Consensus 59 L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRD 138 (932)
T PRK13184 59 LIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRD 138 (932)
T ss_pred CCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 579999999999999999999999999 5999988631 2245677889999999999999999999999
Q ss_pred CCCCCEEEccCCcEEEEeccccccccCCCCCCCCC-----------ceeeccCCCCccccCcccccccCCccccccCCCC
Q 000470 69 IKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDF-----------SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPL 137 (1472)
Q Consensus 69 LKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~-----------~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~ 137 (1472)
|||+|||++.+|.++|+|||+++......+..... ........||+.|+|||++. +..+
T Consensus 139 LKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~----------g~~~ 208 (932)
T PRK13184 139 LKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLL----------GVPA 208 (932)
T ss_pred CchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhc----------CCCC
Confidence 99999999999999999999987652221111100 00112345899999999764 3467
Q ss_pred CccchHHHHHHHHHHHHhCCCCCCchHHHHHHh--cCCCCCcc-cCCCCCHHHHHHHHHhcccCcCCCCCH-HHHHHHhh
Q 000470 138 KPSMDIFAVGCVIAELFLEVPFFELSHLLAYRR--GQYDPSQH-LEKIPDSGIRKMILHMIQLEPELRFSA-ESYLQNYA 213 (1472)
Q Consensus 138 t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~--~~~~~~~~-l~~~~~~~l~~LI~~mL~~dP~~Rpsa-~elL~~~~ 213 (1472)
+.++||||+||++|||++|.+||.......... ....+... .....++.+.+++.+||+.||++|++. +++++.+.
T Consensus 209 S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le 288 (932)
T PRK13184 209 SESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE 288 (932)
T ss_pred CcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 889999999999999999999997544322211 11111111 112345789999999999999999854 55555443
No 330
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.92 E-value=1.9e-25 Score=259.22 Aligned_cols=199 Identities=20% Similarity=0.261 Sum_probs=159.8
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCc
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW 81 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~ 81 (1472)
||||++++++++.+...|+||||++ ++|.+++.+.+.+++.++..++.|++.||.+||+.|++|+||||+||+++.++.
T Consensus 61 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~ 140 (280)
T cd05581 61 HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMH 140 (280)
T ss_pred CCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCC
Confidence 9999999999999999999999996 799999998888999999999999999999999999999999999999999999
Q ss_pred EEEEeccccccccCCCCCCCC-------------CceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHH
Q 000470 82 LYLSDFASFKPTYIPYDDPSD-------------FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGC 148 (1472)
Q Consensus 82 vkL~DFg~a~~~~~~~~~~~~-------------~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~ 148 (1472)
++|+|||.+............ .........++..|+|||.+. ...++.++|||||||
T Consensus 141 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~----------~~~~~~~~Di~slG~ 210 (280)
T cd05581 141 IKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN----------EKPAGKSSDLWALGC 210 (280)
T ss_pred EEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhC----------CCCCChhhhHHHHHH
Confidence 999999988755332211000 001122334678899999764 234788999999999
Q ss_pred HHHHHHhCCCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH----HHHHHH
Q 000470 149 VIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA----ESYLQN 211 (1472)
Q Consensus 149 il~eLltg~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa----~elL~~ 211 (1472)
+++++++|.+||..................++...++.+.++|.+||+.||++||++ +++++|
T Consensus 211 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 211 IIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHHHHhCCCCCCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 999999999999755432222111122223444557889999999999999999999 999988
No 331
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.92 E-value=4e-25 Score=253.30 Aligned_cols=194 Identities=22% Similarity=0.264 Sum_probs=156.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||++++++++.+...|+|+||+. ++|.+++... ..+++.++..++.|++.||.|||++|++|+||+|+||+++
T Consensus 56 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~ 135 (256)
T cd08218 56 MKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT 135 (256)
T ss_pred CCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc
Confidence 579999999999999999999999998 5999998753 2478999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.+........ ......+++.|+|||.+. +..++.++|+||+||++++|++|.
T Consensus 136 ~~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~slG~i~~~l~~g~ 198 (256)
T cd08218 136 KDGTIKLGDFGIARVLNSTVE-------LARTCIGTPYYLSPEICE----------NRPYNNKSDIWALGCVLYEMCTLK 198 (256)
T ss_pred CCCCEEEeeccceeecCcchh-------hhhhccCCccccCHHHhC----------CCCCCCccchhHHHHHHHHHHcCC
Confidence 999999999998875422111 112234677899999764 335678999999999999999998
Q ss_pred CCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.||.......... .........+...+..++++|.+||+.+|++||++.++++|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 199 HAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 8886544332221 11111122344557789999999999999999999999998
No 332
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.92 E-value=5.7e-25 Score=251.93 Aligned_cols=192 Identities=15% Similarity=0.154 Sum_probs=152.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+ ..|++|||+. ++|.+++...+ .+++..+..++.|++.||.|||+.|++||||||+||+++
T Consensus 56 ~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~ 134 (254)
T cd05083 56 LHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS 134 (254)
T ss_pred CCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc
Confidence 5799999999998765 4799999999 69999997643 488999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
.++.++|+|||.++...... .....+..|+|||.+. ...++.++|+|||||++|||++ |
T Consensus 135 ~~~~~kl~Dfg~~~~~~~~~----------~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~~l~el~~~g 194 (254)
T cd05083 135 EDGVAKVSDFGLARVGSMGV----------DNSKLPVKWTAPEALK----------HKKFSSKSDVWSYGVLLWEVFSYG 194 (254)
T ss_pred CCCcEEECCCccceeccccC----------CCCCCCceecCHHHhc----------cCCcCchhhHHHHHHHHHHHHhCC
Confidence 99999999999887542111 1122345799999764 3357889999999999999997 8
Q ss_pred CCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.+||............. ......+...++.+++++.+||+.+|++||+++++++.++
T Consensus 195 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 195 RAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 99986554333221111 1112233445678999999999999999999999998754
No 333
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.92 E-value=6.2e-25 Score=253.41 Aligned_cols=196 Identities=16% Similarity=0.130 Sum_probs=154.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++..++..|++|||++ ++|.+++.. ...+++..++.++.||+.||.|||++|++|+||||+||+
T Consensus 59 ~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nil 138 (267)
T cd08229 59 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVF 138 (267)
T ss_pred ccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 579999999999999999999999999 599998863 345899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||.+....... .......++..|+|||.+. ...++.++|+||+||++|+|++
T Consensus 139 i~~~~~~~l~dfg~~~~~~~~~-------~~~~~~~~~~~~~ape~~~----------~~~~~~~~Dv~slG~il~~l~~ 201 (267)
T cd08229 139 ITATGVVKLGDLGLGRFFSSKT-------TAAHSLVGTPYYMSPERIH----------ENGYNFKSDIWSLGCLLYEMAA 201 (267)
T ss_pred EcCCCCEEECcchhhhccccCC-------cccccccCCcCccCHHHhc----------CCCccchhhHHHHHHHHHHHHh
Confidence 9999999999999876442111 0112345678899999764 3356789999999999999999
Q ss_pred CCCCCCchHH--HHHHhc-C-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 156 EVPFFELSHL--LAYRRG-Q-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 156 g~~pf~~~~~--~~~~~~-~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|..||..... ....+. . ...........++.++++|.+||..||++|||+.++++-++
T Consensus 202 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~ 263 (267)
T cd08229 202 LQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAK 263 (267)
T ss_pred CCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHh
Confidence 9888853321 111111 1 11111122346678999999999999999999999887654
No 334
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.92 E-value=8.5e-25 Score=255.91 Aligned_cols=197 Identities=18% Similarity=0.120 Sum_probs=152.3
Q ss_pred CCCCcceeeEEEEeC-----CeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000470 2 SSTPCVHKKFWQETD-----KAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~-----~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKp 71 (1472)
+||||+++++++... ...|+||||++ ++|.+++.. ...+++..++.++.|++.||+|||++||+||||||
T Consensus 77 ~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp 156 (291)
T cd06639 77 NHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKG 156 (291)
T ss_pred CCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence 799999999998754 36899999998 599998753 35689999999999999999999999999999999
Q ss_pred CCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 72 eNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
+||+++.++.++|+|||.++....... ......++..|+|||.+.... .....++.++||||+||++|
T Consensus 157 ~nili~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Di~slGvi~~ 224 (291)
T cd06639 157 NNILLTTEGGVKLVDFGVSAQLTSTRL-------RRNTSVGTPFWMAPEVIACEQ-----QYDYSYDARCDVWSLGITAI 224 (291)
T ss_pred HHEEEcCCCCEEEeecccchhcccccc-------cccCccCCccccChhhhcCCC-----CcccccCCccchHHHHHHHH
Confidence 999999999999999998775421111 112234678899999875321 11234688999999999999
Q ss_pred HHHhCCCCCCchH----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 152 ELFLEVPFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 152 eLltg~~pf~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||++|++||.... +..+.+.... ....+......+.+||.+||+.||++||++.|+++|
T Consensus 225 el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 225 ELGDGDPPLFDMHPVKTLFKIPRNPPP-TLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHhhCCCCCCCCcHHHHHHHHhcCCCC-CCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 9999988885432 2222222111 111122344679999999999999999999999998
No 335
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.92 E-value=4.3e-25 Score=251.89 Aligned_cols=194 Identities=21% Similarity=0.250 Sum_probs=160.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.++.+...|+||||++ ++|.+++.....+++.++..++.|++.||.|||+.|++|+||||+||+++.+
T Consensus 50 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~ 129 (250)
T cd05123 50 INHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDAD 129 (250)
T ss_pred cCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCC
Confidence 579999999999999999999999996 7999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+........ ......++..|+|||.+. +...+.++|+|||||++|+|++|..|
T Consensus 130 ~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~~Pe~~~----------~~~~~~~~D~~slG~~~~~l~~g~~p 192 (250)
T cd05123 130 GHIKLTDFGLAKELSSEGS-------RTNTFCGTPEYLAPEVLL----------GKGYGKAVDWWSLGVLLYEMLTGKPP 192 (250)
T ss_pred CcEEEeecCcceecccCCC-------cccCCcCCccccChHHhC----------CCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 9999999998875532110 112344677899999764 23467889999999999999999988
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH---HHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA---ESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa---~elL~~ 211 (1472)
|..................++...+..+.++|.+||..||++||++ +++++|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 193 FYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred CCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence 8655433322222223334555667889999999999999999999 899887
No 336
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.92 E-value=5.1e-25 Score=258.17 Aligned_cols=195 Identities=24% Similarity=0.349 Sum_probs=151.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++++|.+++...+. +++..++.++.||+.||+|||++||+||||||+||+++.
T Consensus 58 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~ 137 (294)
T PLN00009 58 MQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR 137 (294)
T ss_pred ccCCCEeeEEEEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC
Confidence 579999999999999999999999999999998866443 578888899999999999999999999999999999985
Q ss_pred -CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 79 -WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 79 -~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.+.+||+|||.+........ ......+++.|+|||.+.. ...++.++||||+||++|+|++|.
T Consensus 138 ~~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~i~~~l~tg~ 201 (294)
T PLN00009 138 RTNALKLADFGLARAFGIPVR-------TFTHEVVTLWYRAPEILLG---------SRHYSTPVDIWSVGCIFAEMVNQK 201 (294)
T ss_pred CCCEEEEcccccccccCCCcc-------ccccCceeecccCHHHHhC---------CCCCCcHHHHHHHHHHHHHHHhCC
Confidence 45799999998865422111 1123345788999997642 235788999999999999999999
Q ss_pred CCCCchHH-HHHHh---cCCCC---------------------C-c---ccCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 158 PFFELSHL-LAYRR---GQYDP---------------------S-Q---HLEKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 158 ~pf~~~~~-~~~~~---~~~~~---------------------~-~---~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
+||..... ..+.+ ....+ . . ......++.++++|.+||+.||++||+++++
T Consensus 202 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~ 281 (294)
T PLN00009 202 PLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAA 281 (294)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHH
Confidence 99964321 11110 00000 0 0 0112345779999999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
++|
T Consensus 282 l~~ 284 (294)
T PLN00009 282 LEH 284 (294)
T ss_pred hcC
Confidence 998
No 337
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.92 E-value=7.7e-25 Score=254.21 Aligned_cols=193 Identities=21% Similarity=0.182 Sum_probs=156.2
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
.||||+++++++..+...|+||||++ ++|.+++... .+++..+..++.|++.||.|||+.||+||||+|+||+++.++
T Consensus 60 ~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~ 138 (277)
T cd06917 60 QPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTG 138 (277)
T ss_pred CCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCC
Confidence 59999999999999999999999998 5999998765 689999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||.+......... .....|+..|+|||.+.. +..++.++|+||+||++|+|++|.+||
T Consensus 139 ~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~~ll~g~~p~ 202 (277)
T cd06917 139 NVKLCDFGVAALLNQNSSK-------RSTFVGTPYWMAPEVITE---------GKYYDTKADIWSLGITIYEMATGNPPY 202 (277)
T ss_pred CEEEccCCceeecCCCccc-------cccccCCcceeCHHHhcc---------CCccccchhHHHHHHHHHHHHhCCCCC
Confidence 9999999988765322110 122346778999997642 235678999999999999999999999
Q ss_pred CchHHHHHHhcCC-CCCcccCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 161 ELSHLLAYRRGQY-DPSQHLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~-~~~~~l~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
............. ...+.+.. ..+.++.+++.+||+.||++||++.|+++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 203 SDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 7654433222111 11122222 256789999999999999999999999987
No 338
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.92 E-value=7.1e-25 Score=251.27 Aligned_cols=196 Identities=15% Similarity=0.112 Sum_probs=155.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++++++.....|++|||+. ++|.+++... ..+++..++.++.|++.||.|||++|++||||||+||+++.
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~ 135 (256)
T cd05112 56 LSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGE 135 (256)
T ss_pred CCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcC
Confidence 579999999999999999999999999 6999998763 45899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.+....... .. ......++..|+|||.+. ...++.++||||+||++|||++ |.
T Consensus 136 ~~~~~l~d~g~~~~~~~~~-----~~-~~~~~~~~~~~~aPe~~~----------~~~~~~~~Dv~slG~~l~el~~~g~ 199 (256)
T cd05112 136 NQVVKVSDFGMTRFVLDDQ-----YT-SSTGTKFPVKWSSPEVFS----------FSKYSSKSDVWSFGVLMWEVFSEGK 199 (256)
T ss_pred CCeEEECCCcceeecccCc-----cc-ccCCCccchhhcCHhHhc----------cCCcChHHHHHHHHHHHHHHHcCCC
Confidence 9999999999876542111 00 001122346799999764 2357789999999999999998 89
Q ss_pred CCCCchHHHHHHhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 158 PFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+||.............. .....+...+..+.+|+.+||+.+|++||++.|+++++
T Consensus 200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 200 TPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 99975443322211111 11123445678899999999999999999999999874
No 339
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.92 E-value=5.1e-25 Score=253.82 Aligned_cols=199 Identities=21% Similarity=0.171 Sum_probs=157.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||+++++.+..++..|++|||++ ++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++
T Consensus 56 l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~ 135 (267)
T cd06610 56 CNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL 135 (267)
T ss_pred cCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE
Confidence 579999999999999999999999999 5999999753 458999999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
++++.++|+|||.+.....+..... .......++..|+|||.+.. ...++.++|+|||||++|+|++|
T Consensus 136 ~~~~~~~l~df~~~~~~~~~~~~~~---~~~~~~~~~~~y~~Pe~~~~---------~~~~~~~~Dv~slG~i~~~l~~g 203 (267)
T cd06610 136 GEDGSVKIADFGVSASLADGGDRTR---KVRKTFVGTPCWMAPEVMEQ---------VHGYDFKADIWSFGITAIELATG 203 (267)
T ss_pred cCCCCEEEcccchHHHhccCccccc---cccccccCChhhcChHHHcc---------ccCcCcccchHhHhHHHHHHHhC
Confidence 9999999999998876543322210 11123346788999998752 12568899999999999999999
Q ss_pred CCCCCchHHHH-HHhcCCCCCcccC-----CCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELSHLLA-YRRGQYDPSQHLE-----KIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~~~~~-~~~~~~~~~~~l~-----~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+.||......+ +..........+. ...++.+++++.+||+.||++||+++++++|
T Consensus 204 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 204 AAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 98886443221 1111111111111 2345789999999999999999999999998
No 340
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.92 E-value=2.3e-24 Score=234.62 Aligned_cols=263 Identities=21% Similarity=0.286 Sum_probs=215.2
Q ss_pred CCCcc-cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC
Q 000470 1041 DSGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1041 ~~~W~-p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~ 1119 (1472)
-..|+ .+|+|..+|.||...|..++||+-+.|+.+|+.|+.||.||+...+ -...|++|-+.|.|++.+|.-+
T Consensus 175 ikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nk------vIR~YhGHlS~V~~L~lhPTld 248 (460)
T KOG0285|consen 175 IKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNK------VIRHYHGHLSGVYCLDLHPTLD 248 (460)
T ss_pred eEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhh------hHHHhccccceeEEEeccccce
Confidence 35799 5799999999999999999999999999999999999999998755 4557889988999999999999
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~ 1199 (1472)
.|++|+.|.+++|||+++.. . ......|...|..+.+.|. ...+++|+.|++|++||++.++.
T Consensus 249 vl~t~grDst~RvWDiRtr~-------------~-V~~l~GH~~~V~~V~~~~~---dpqvit~S~D~tvrlWDl~agkt 311 (460)
T KOG0285|consen 249 VLVTGGRDSTIRVWDIRTRA-------------S-VHVLSGHTNPVASVMCQPT---DPQVITGSHDSTVRLWDLRAGKT 311 (460)
T ss_pred eEEecCCcceEEEeeecccc-------------e-EEEecCCCCcceeEEeecC---CCceEEecCCceEEEeeeccCce
Confidence 99999999999999998521 1 1223346666777777776 45899999999999999999999
Q ss_pred cceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEE
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1279 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~v 1279 (1472)
..++.+ |...+.+++.+|....+++++.| .++.|++..+..+..+. .+..-|+.+.. ..++ .+++
T Consensus 312 ~~tlt~--hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nls-gh~~iintl~~-nsD~----------v~~~ 376 (460)
T KOG0285|consen 312 MITLTH--HKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLS-GHNAIINTLSV-NSDG----------VLVS 376 (460)
T ss_pred eEeeec--ccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccc-cccceeeeeee-ccCc----------eEEE
Confidence 999987 88899999999999999998887 59999999988887744 36667777776 3322 5788
Q ss_pred EEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEecc
Q 000470 1280 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1359 (1472)
Q Consensus 1280 as~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1359 (1472)
|+.+|.+..||.++|.+-|....... |.+ -....+|.+.+|
T Consensus 377 G~dng~~~fwdwksg~nyQ~~~t~vq---------------pGS------------------------l~sEagI~as~f 417 (460)
T KOG0285|consen 377 GGDNGSIMFWDWKSGHNYQRGQTIVQ---------------PGS------------------------LESEAGIFASCF 417 (460)
T ss_pred cCCceEEEEEecCcCccccccccccc---------------CCc------------------------cccccceeEEee
Confidence 88889999999999987666542221 111 112348999999
Q ss_pred CCCC-cEEEccCCCeEEEEeCC
Q 000470 1360 LPGG-DLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1360 ~p~g-~llTgg~Dg~IrlWDl~ 1380 (1472)
...| +|+||+.|.+|++|.-+
T Consensus 418 Dktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 418 DKTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred cccCceEEeccCCcceEEEecc
Confidence 8888 89999999999999754
No 341
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.92 E-value=4.7e-25 Score=253.52 Aligned_cols=194 Identities=23% Similarity=0.280 Sum_probs=156.8
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeecC
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCH-----EKGICHGD 68 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH-----~~gIvH~D 68 (1472)
++||||+++++++.. +...|++|||++ ++|.+++.. ...+++.+++.++.||+.||.||| +.+|+|||
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~d 135 (265)
T cd08217 56 LKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRD 135 (265)
T ss_pred cCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecC
Confidence 579999999997754 457899999998 699999864 356899999999999999999999 89999999
Q ss_pred CCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHH
Q 000470 69 IKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGC 148 (1472)
Q Consensus 69 LKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~ 148 (1472)
|||+||+++.++.++|+|||.++...... .......++..|+|||.+. ...++.++|+||||+
T Consensus 136 l~p~nili~~~~~~kl~d~g~~~~~~~~~-------~~~~~~~~~~~~~~pE~~~----------~~~~~~~~Dv~slG~ 198 (265)
T cd08217 136 LKPANIFLDANNNVKLGDFGLAKILGHDS-------SFAKTYVGTPYYMSPEQLN----------HMSYDEKSDIWSLGC 198 (265)
T ss_pred CCHHHEEEecCCCEEEecccccccccCCc-------ccccccccCCCccChhhhc----------CCCCCchhHHHHHHH
Confidence 99999999999999999999987653211 1123345788899999874 234778999999999
Q ss_pred HHHHHHhCCCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 149 VIAELFLEVPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 149 il~eLltg~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
++++|++|..||.......+..... .....++...+..+.+++.+||+.+|++||++.++++|
T Consensus 199 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 199 LIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 9999999999997654333222111 12223455567889999999999999999999999998
No 342
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.92 E-value=5.6e-25 Score=251.87 Aligned_cols=193 Identities=24% Similarity=0.293 Sum_probs=156.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++.+..++..|+||||++ ++|.+++..+ ..+++.++..++.|++.||+|||++||+||||||+||+++
T Consensus 56 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~ 135 (256)
T cd08220 56 LSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD 135 (256)
T ss_pred CCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc
Confidence 579999999999999999999999998 5999999763 3489999999999999999999999999999999999998
Q ss_pred cCC-cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 78 SWN-WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 78 ~~~-~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
.++ .++|+|||.++....... .....++..|+|||.+. ...++.++|+||+||++|+|++|
T Consensus 136 ~~~~~~~l~d~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~~l~~l~~~ 197 (256)
T cd08220 136 KHKMVVKIGDFGISKILSSKSK--------AYTVVGTPCYISPELCE----------GKPYNQKSDIWALGCVLYELASL 197 (256)
T ss_pred CCCCEEEEccCCCceecCCCcc--------ccccccCCcccCchhcc----------CCCCCcccchHHHHHHHHHHHhC
Confidence 654 689999999876532211 11234677899999764 33567899999999999999999
Q ss_pred CCCCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
..||...+....... .......++...++.+++++.+||..||++||++.|+++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 198 KRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 989976543332211 1112223444567789999999999999999999999998
No 343
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.92 E-value=7.1e-25 Score=252.09 Aligned_cols=195 Identities=15% Similarity=0.088 Sum_probs=151.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.. ...|++|||++ ++|.+++... ..+++.+++.++.|++.||.|||++||+||||||+||+++
T Consensus 58 l~~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~ 136 (260)
T cd05070 58 LRHDKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG 136 (260)
T ss_pred cCCCceEEEEeEECC-CCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe
Confidence 589999999998854 56899999998 6999999753 3489999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
+++.++|+|||.+........ . ......++..|+|||.+. ...++.++|||||||++|||++ |
T Consensus 137 ~~~~~~l~dfg~~~~~~~~~~-----~-~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~~l~~~g 200 (260)
T cd05070 137 DGLVCKIADFGLARLIEDNEY-----T-ARQGAKFPIKWTAPEAAL----------YGRFTIKSDVWSFGILLTELVTKG 200 (260)
T ss_pred CCceEEeCCceeeeeccCccc-----c-cccCCCCCccccChHHHh----------cCCCcchhhhHHHHHHHHHHHhcC
Confidence 999999999999865421110 0 011222355699999764 3357889999999999999999 7
Q ss_pred CCCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
.+||.......... .........+...+..+++|+.+||..||++|||+.++.+-+
T Consensus 201 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l 257 (260)
T cd05070 201 RVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFL 257 (260)
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 88886543222111 111112223445677899999999999999999999998754
No 344
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.92 E-value=2.4e-25 Score=259.69 Aligned_cols=195 Identities=23% Similarity=0.298 Sum_probs=152.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.++..|+|+||+++ .|.++......+++.+++.++.||+.||.|||+.||+||||||+||+++++
T Consensus 57 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~ 136 (286)
T cd07846 57 LRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQS 136 (286)
T ss_pred cCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC
Confidence 5799999999999999999999999995 677666665568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++........ . .....++.+|+|||.+.. ...++.++||||+||++|||++|.+|
T Consensus 137 ~~~~l~dfg~~~~~~~~~~---~----~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~el~~g~~~ 200 (286)
T cd07846 137 GVVKLCDFGFARTLAAPGE---V----YTDYVATRWYRAPELLVG---------DTKYGRAVDIWAVGCLVTEMLTGEPL 200 (286)
T ss_pred CcEEEEeeeeeeeccCCcc---c----cCcccceeeccCcHHhcc---------ccccCchHhHHHHHHHHHHHHcCCCC
Confidence 9999999998875432211 1 122345788999998742 23467889999999999999999999
Q ss_pred CCchHHHH----HHhc--------------------CCCCC-------cccCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 160 FELSHLLA----YRRG--------------------QYDPS-------QHLEKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 160 f~~~~~~~----~~~~--------------------~~~~~-------~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
|....... +... ...+. .......+..+.+|+.+||+.+|++||++.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i 280 (286)
T cd07846 201 FPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQL 280 (286)
T ss_pred CCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHH
Confidence 86433211 1100 00000 00112345679999999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
++|
T Consensus 281 l~~ 283 (286)
T cd07846 281 LHH 283 (286)
T ss_pred hcC
Confidence 988
No 345
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.92 E-value=1.1e-24 Score=250.87 Aligned_cols=195 Identities=15% Similarity=0.090 Sum_probs=151.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||++++++++. ...|+||||++ |+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++
T Consensus 58 l~~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~ 136 (262)
T cd05071 58 LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 136 (262)
T ss_pred CCCCCcceEEEEECC-CCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc
Confidence 579999999998754 45899999999 6999999753 3578999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
.++.++|+|||.++........ ......++..|+|||... ...++.++|||||||++|||++ |
T Consensus 137 ~~~~~~L~dfg~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~----------~~~~~~~~DvwslG~~l~ellt~g 200 (262)
T cd05071 137 ENLVCKVADFGLARLIEDNEYT------ARQGAKFPIKWTAPEAAL----------YGRFTIKSDVWSFGILLTELTTKG 200 (262)
T ss_pred CCCcEEeccCCceeeccccccc------cccCCcccceecCHhHhc----------cCCCCchhhHHHHHHHHHHHHcCC
Confidence 9999999999988755321110 112233466799999653 3467889999999999999999 6
Q ss_pred CCCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
.+||........ ...............+..+.+++.+||+.||++||++.++++-+
T Consensus 201 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l 257 (262)
T cd05071 201 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 257 (262)
T ss_pred CCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHH
Confidence 888864432221 11111111122334567899999999999999999999999763
No 346
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.92 E-value=1.3e-24 Score=257.33 Aligned_cols=193 Identities=20% Similarity=0.215 Sum_probs=154.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++|||+++++++++++...|+||||+.|+|.+++.. ...+++.++..++.||+.||.|||++||+||||||+||+++.+
T Consensus 78 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~ 157 (313)
T cd06633 78 LKHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP 157 (313)
T ss_pred CCCCCCccEEEEEEeCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCC
Confidence 579999999999999999999999999999998865 3458999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+..... .....++..|+|||.+... ....++.++||||+||++|+|++|.+|
T Consensus 158 ~~~kL~dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~-------~~~~~~~~sDv~slGvil~el~~g~~p 219 (313)
T cd06633 158 GQVKLADFGSASKSSP-----------ANSFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPP 219 (313)
T ss_pred CCEEEeecCCCcccCC-----------CCCccccccccChhhcccc-------CCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999998753210 1233467889999987521 123578899999999999999999877
Q ss_pred CCchH-HHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH-LLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~-~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...+ ...... .............+..+++|+.+||+.+|.+||++.+++.|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 220 LFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 75432 222111 11111122233455679999999999999999999999987
No 347
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.92 E-value=6.8e-25 Score=253.57 Aligned_cols=199 Identities=14% Similarity=0.125 Sum_probs=154.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ ++|.+++.. .+.+++.+++.++.|++.||+|||++|++||||||+||+++.
T Consensus 62 l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~ 141 (269)
T cd05065 62 FDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNS 141 (269)
T ss_pred CCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcC
Confidence 579999999999999999999999999 599999875 456899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCC--CCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG--KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL- 155 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~--gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt- 155 (1472)
++.++|+|||.++........+ . +..... .+..|+|||.+. ...++.++||||+||++|||++
T Consensus 142 ~~~~kl~dfg~~~~~~~~~~~~---~-~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~DvwslG~~l~e~l~~ 207 (269)
T cd05065 142 NLVCKVSDFGLSRFLEDDTSDP---T-YTSSLGGKIPIRWTAPEAIA----------YRKFTSASDVWSYGIVMWEVMSY 207 (269)
T ss_pred CCcEEECCCccccccccCcccc---c-cccccCCCcceeecCHhHhc----------cCcccchhhhhhhHHHHHHHhcC
Confidence 9999999999876543221111 1 111111 134699999764 3457889999999999999886
Q ss_pred CCCCCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 156 EVPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 156 g~~pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|.+||........... ........+...+..+.+++.+||+.+|++||++++++..+.
T Consensus 208 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 266 (269)
T cd05065 208 GERPYWDMSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLD 266 (269)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 8888854332222211 111111122344678999999999999999999999998754
No 348
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.92 E-value=1.1e-24 Score=250.68 Aligned_cols=196 Identities=14% Similarity=0.071 Sum_probs=151.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.. ...|++|||+. ++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+||+++
T Consensus 58 l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~ 136 (260)
T cd05069 58 LRHDKLVPLYAVVSE-EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG 136 (260)
T ss_pred CCCCCeeeEEEEEcC-CCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc
Confidence 579999999998854 56899999999 5999999753 3478999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
+++.++|+|||.++........ ......++..|+|||... +..++.++|||||||++|||++ |
T Consensus 137 ~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Di~slG~~l~el~t~g 200 (260)
T cd05069 137 DNLVCKIADFGLARLIEDNEYT------ARQGAKFPIKWTAPEAAL----------YGRFTIKSDVWSFGILLTELVTKG 200 (260)
T ss_pred CCCeEEECCCccceEccCCccc------ccCCCccchhhCCHHHhc----------cCCcChHHHHHHHHHHHHHHHhCC
Confidence 9999999999988654221110 011223456799999653 3457889999999999999999 7
Q ss_pred CCCCCchHHHH-HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLA-YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.+||....... +...........+...+..+++++.+||..||++||+++++++-++
T Consensus 201 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 258 (260)
T cd05069 201 RVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLE 258 (260)
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 88886432221 1111111112233445678999999999999999999999997643
No 349
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.92 E-value=7.8e-25 Score=255.55 Aligned_cols=193 Identities=20% Similarity=0.239 Sum_probs=154.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+++||+. ++|.+++.. ..+++.++..++.|++.||+|||++||+||||||+||+++.+
T Consensus 73 ~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~ 151 (285)
T cd06648 73 YQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSD 151 (285)
T ss_pred cCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCC
Confidence 479999999999999999999999998 599999887 568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+...... .+ ......|+..|+|||.+. +..++.++||||+||++|||++|.+|
T Consensus 152 ~~~~l~d~g~~~~~~~~--~~-----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slGv~l~ell~g~~p 214 (285)
T cd06648 152 GRVKLSDFGFCAQVSKE--VP-----RRKSLVGTPYWMAPEVIS----------RLPYGTEVDIWSLGIMVIEMVDGEPP 214 (285)
T ss_pred CcEEEcccccchhhccC--Cc-----ccccccCCccccCHHHhc----------CCCCCCcccHHHHHHHHHHHHhCCCC
Confidence 99999999987644211 11 012234678899999764 23577899999999999999999888
Q ss_pred CCchHHH-HHHhc--CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLL-AYRRG--QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~-~~~~~--~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...+.. .+... ...+....+...+..+.++|.+||..+|++||++.++++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 215 YFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred CcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 7543322 22111 1111111122256789999999999999999999999987
No 350
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.92 E-value=9.6e-25 Score=258.90 Aligned_cols=191 Identities=19% Similarity=0.200 Sum_probs=154.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++|||++++++++..+...|+||||+.|+|.+.+.. ...+++.++..++.|++.||.|||++||+||||||+||+++.+
T Consensus 82 l~h~~iv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~ 161 (317)
T cd06635 82 IKHPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP 161 (317)
T ss_pred CCCCCEEEEEEEEeeCCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCC
Confidence 579999999999999999999999999999888754 4558999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++..... .....++..|+|||.+... ....++.++||||+||++|||++|.+|
T Consensus 162 ~~~kl~dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~-------~~~~~~~~~Dv~slGvil~el~~g~~p 223 (317)
T cd06635 162 GQVKLADFGSASIASP-----------ANSFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPP 223 (317)
T ss_pred CCEEEecCCCccccCC-----------cccccCCccccChhhhhcC-------CCCCCCccccHHHHHHHHHHHHhCCCC
Confidence 9999999998764311 1223467789999987421 123578899999999999999999877
Q ss_pred CCchH-HH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH-LL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~-~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.... .. ........ .......++.++++|.+||+.+|.+||++.++++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 224 LFNMNAMSALYHIAQNESP--TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred CCCccHHHHHHHHHhccCC--CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 74332 22 12222211 11223456789999999999999999999999998
No 351
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=9.5e-26 Score=250.00 Aligned_cols=186 Identities=18% Similarity=0.179 Sum_probs=164.9
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCc
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW 81 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~ 81 (1472)
-|.+++++.+|++-..+|+||||+. |+|--.|+.-+.+.+..+.+++.+|+-||-+||++||+.||||.+|||++.+|+
T Consensus 409 ppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGH 488 (683)
T KOG0696|consen 409 PPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGH 488 (683)
T ss_pred CchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCc
Confidence 3677889999999999999999999 699888988888999999999999999999999999999999999999999999
Q ss_pred EEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 000470 82 LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE 161 (1472)
Q Consensus 82 vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~ 161 (1472)
+||+|||+++.-..+. ....|.|||+.|+|||++. ..+|+.++|.||+|++||||+.|+|||+
T Consensus 489 iKi~DFGmcKEni~~~-------~TTkTFCGTPdYiAPEIi~----------YqPYgksvDWWa~GVLLyEmlaGQpPFd 551 (683)
T KOG0696|consen 489 IKIADFGMCKENIFDG-------VTTKTFCGTPDYIAPEIIA----------YQPYGKSVDWWAFGVLLYEMLAGQPPFD 551 (683)
T ss_pred eEeeecccccccccCC-------cceeeecCCCcccccceEE----------ecccccchhHHHHHHHHHHHHcCCCCCC
Confidence 9999999998543222 2346789999999999886 3488999999999999999999999999
Q ss_pred chHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH
Q 000470 162 LSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA 205 (1472)
Q Consensus 162 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa 205 (1472)
+.+..++.+.........++..+.++.+++...|.+.|.+|..+
T Consensus 552 GeDE~elF~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGc 595 (683)
T KOG0696|consen 552 GEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGC 595 (683)
T ss_pred CCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhhcCCccccCC
Confidence 88877776666665666788888999999999999999999854
No 352
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.92 E-value=5.9e-25 Score=256.38 Aligned_cols=192 Identities=19% Similarity=0.158 Sum_probs=155.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++......|+||||++ ++|.+++...+.+++..+..++.|++.||.|||+ .|++||||||+||+++.
T Consensus 60 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~ 139 (284)
T cd06620 60 CRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS 139 (284)
T ss_pred cCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC
Confidence 579999999999999999999999999 6999999887789999999999999999999997 69999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||++....... .....++..|+|||.+. ...++.++||||+||++|+|++|.+
T Consensus 140 ~~~~~l~d~gl~~~~~~~~---------~~~~~~~~~~~aPE~~~----------~~~~~~~~Di~slG~~l~~l~tg~~ 200 (284)
T cd06620 140 RGQIKLCDFGVSGELINSI---------ADTFVGTSTYMSPERIQ----------GGKYTVKSDVWSLGISIIELALGKF 200 (284)
T ss_pred CCcEEEccCCcccchhhhc---------cCccccCcccCCHHHHc----------cCCCCccchHHHHHHHHHHHHhCCC
Confidence 9999999999876431111 12345788899999764 2366789999999999999999999
Q ss_pred CCCchHH-----------HHH-HhcCCCCCcccCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHL-----------LAY-RRGQYDPSQHLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~-----------~~~-~~~~~~~~~~l~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||..... ... ..........++. ..+..+.+||.+||+.||++||+++|++++
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 201 PFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred CCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 9864321 111 1111111112222 245689999999999999999999999988
No 353
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.92 E-value=6.8e-25 Score=262.50 Aligned_cols=198 Identities=23% Similarity=0.353 Sum_probs=153.4
Q ss_pred CCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 2 SSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+||||+++++++... ...|+||||++++|.+++..+ .+++..++.++.||+.||.|||+.||+||||||+||+++.+
T Consensus 65 ~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~ 143 (337)
T cd07852 65 DHPNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSD 143 (337)
T ss_pred CCCCccceeeeeccCCCceEEEEecccccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC
Confidence 899999999998653 468999999999999999876 68999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++.......... ........++..|+|||.+.. ...++.++||||+||++|+|++|++|
T Consensus 144 ~~~kl~d~g~~~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~sDi~slG~~l~el~tg~~p 212 (337)
T cd07852 144 CRVKLADFGLARSLSELEENPE--NPVLTDYVATRWYRAPEILLG---------STRYTKGVDMWSVGCILGEMLLGKPL 212 (337)
T ss_pred CcEEEeeccchhcccccccccc--CcchhcccccccccCceeeec---------cccccccchHHHHHHHHHHHHhCCCC
Confidence 9999999998876533221100 011123346888999998742 23567899999999999999999999
Q ss_pred CCchHHH----HHHh---------------------------cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 160 FELSHLL----AYRR---------------------------GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 160 f~~~~~~----~~~~---------------------------~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
|...... .+.. .............+..+.++|.+||+.||++|||+.++
T Consensus 213 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~i 292 (337)
T cd07852 213 FPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEA 292 (337)
T ss_pred CCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHH
Confidence 8532211 0000 00011111122256789999999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
++|
T Consensus 293 l~~ 295 (337)
T cd07852 293 LEH 295 (337)
T ss_pred hhC
Confidence 998
No 354
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.92 E-value=5.7e-25 Score=257.78 Aligned_cols=194 Identities=24% Similarity=0.346 Sum_probs=150.1
Q ss_pred CCCCcceeeEEEEeCCe-----EEEEecccCCcHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000470 2 SSTPCVHKKFWQETDKA-----AYLLRQYFFNSLRDRLSTP-----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~-----~~lV~Ey~~gsL~d~l~~~-----~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKp 71 (1472)
.||||+++++++..+.. .|+||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||
T Consensus 59 ~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~ 138 (295)
T cd07837 59 ESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKP 138 (295)
T ss_pred CCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCh
Confidence 46999999999987665 8999999999999988542 3479999999999999999999999999999999
Q ss_pred CCEEEcc-CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 72 ENVLVTS-WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 72 eNILv~~-~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
+||+++. .+.++|+|||.++....+... .....+++.|+|||.+.. ...++.++||||+||++
T Consensus 139 ~nil~~~~~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~~l 202 (295)
T cd07837 139 QNLLVDKQKGLLKIADLGLGRAFSIPVKS-------YTHEIVTLWYRAPEVLLG---------STHYSTPVDIWSVGCIF 202 (295)
T ss_pred HHEEEecCCCeEEEeecccceecCCCccc-------cCCcccccCCCChHHhhC---------CCCCCchHHHHHHHHHH
Confidence 9999998 889999999988755322111 012235678999997742 23568899999999999
Q ss_pred HHHHhCCCCCCchH-HH---HHHhcCCCCC------------------------cccCCCCCHHHHHHHHHhcccCcCCC
Q 000470 151 AELFLEVPFFELSH-LL---AYRRGQYDPS------------------------QHLEKIPDSGIRKMILHMIQLEPELR 202 (1472)
Q Consensus 151 ~eLltg~~pf~~~~-~~---~~~~~~~~~~------------------------~~l~~~~~~~l~~LI~~mL~~dP~~R 202 (1472)
|+|++|.+||.... .. .+......+. .......++.+.+||.+||+.||.+|
T Consensus 203 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R 282 (295)
T cd07837 203 AEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKR 282 (295)
T ss_pred HHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhc
Confidence 99999998885432 11 1111100000 00112346789999999999999999
Q ss_pred CCHHHHHHH
Q 000470 203 FSAESYLQN 211 (1472)
Q Consensus 203 psa~elL~~ 211 (1472)
|+++|++.|
T Consensus 283 ~~~~eil~~ 291 (295)
T cd07837 283 ISAKAALTH 291 (295)
T ss_pred CCHHHHhcC
Confidence 999999998
No 355
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.92 E-value=4.7e-26 Score=258.83 Aligned_cols=193 Identities=21% Similarity=0.225 Sum_probs=163.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLS--TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~--~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
+.||-||.+...||+.+.+++|||-+.|+..+.|- .+++|++...++++.||+.||+|||-+||+|+||||||||+.+
T Consensus 620 l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas 699 (888)
T KOG4236|consen 620 LHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLAS 699 (888)
T ss_pred cCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeecc
Confidence 47999999999999999999999999999888874 4678999999999999999999999999999999999999976
Q ss_pred CC---cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 79 WN---WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 79 ~~---~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
.. ++||||||.++.+.. ..+..+..||+.|+|||++. ...|+..-|+||.|+|+|--+.
T Consensus 700 ~~~FPQvKlCDFGfARiIgE--------ksFRrsVVGTPAYLaPEVLr----------nkGyNrSLDMWSVGVIiYVsLS 761 (888)
T KOG4236|consen 700 ASPFPQVKLCDFGFARIIGE--------KSFRRSVVGTPAYLAPEVLR----------NKGYNRSLDMWSVGVIIYVSLS 761 (888)
T ss_pred CCCCCceeeccccceeecch--------hhhhhhhcCCccccCHHHHh----------hccccccccceeeeEEEEEEec
Confidence 53 799999999997632 12346778999999999886 3467888999999999999999
Q ss_pred CCCCCCchH-H-HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSH-L-LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~-~-~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|..||+..+ + .++....+-..+..++..++.+.|||..+|+..=.+|+|.++.|.|
T Consensus 762 GTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 762 GTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred ccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 988886543 2 2344444444444444556789999999999999999999999998
No 356
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.92 E-value=1.3e-24 Score=254.95 Aligned_cols=200 Identities=16% Similarity=0.089 Sum_probs=151.3
Q ss_pred CCCCCcceeeEEEEeCC----eEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETDK----AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~----~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
+.|+||++++++..... ..|+++|++..++.+.+......++..++.++.|++.||+|||++||+||||||+|||+
T Consensus 80 ~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill 159 (294)
T PHA02882 80 IDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV 159 (294)
T ss_pred CCCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 47999999998765543 45788999888888887765557888999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++.++|+|||+++....................||+.|+|||.+. +..++.++||||+||++|||++|
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~----------~~~~~~~~DiwSlG~~l~el~~g 229 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHN----------GACVTRRGDLESLGYCMLKWAGI 229 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhC----------CCCCCcHHHHHHHHHHHHHHHhC
Confidence 99999999999998765322111100001112345899999999764 44678999999999999999999
Q ss_pred CCCCCchH----HH-----HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELSH----LL-----AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~~----~~-----~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+||.... .. .+.......... ....++.+.+++..|+..+|++||+++++++-
T Consensus 230 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~ 292 (294)
T PHA02882 230 KLPWKGFGHNGNLIHAAKCDFIKRLHEGKIK-IKNANKFIYDFIECVTKLSYEEKPDYDALIKI 292 (294)
T ss_pred CCCCCccccchHHHHHhHHHHHHHhhhhhhc-cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHh
Confidence 99996431 11 111111111111 22345789999999999999999999999875
No 357
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.92 E-value=7.6e-25 Score=258.03 Aligned_cols=196 Identities=15% Similarity=0.090 Sum_probs=154.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+ ..++++||++ |+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+||+++.
T Consensus 66 l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~ 144 (303)
T cd05110 66 MDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS 144 (303)
T ss_pred CCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecC
Confidence 5899999999998764 4679999999 79999997654 5899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.+||+|||.++....... ........++..|+|||.+. +..++.++|||||||++|||++ |.
T Consensus 145 ~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~DiwslG~~l~el~t~g~ 209 (303)
T cd05110 145 PNHVKITDFGLARLLEGDEK-----EYNADGGKMPIKWMALECIH----------YRKFTHQSDVWSYGVTIWELMTFGG 209 (303)
T ss_pred CCceEEccccccccccCccc-----ccccCCCccccccCCHHHhc----------cCCCChHHHHHHHHHHHHHHHhCCC
Confidence 99999999999875532111 11112233466799999764 3467889999999999999997 78
Q ss_pred CCCCch---HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 158 PFFELS---HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~pf~~~---~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.||... ....+....... ..+...+..+++++.+||..+|++||+++++++.++.
T Consensus 210 ~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~ 267 (303)
T cd05110 210 KPYDGIPTREIPDLLEKGERL--PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSR 267 (303)
T ss_pred CCCCCCCHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 888543 233333222211 2234556789999999999999999999999988654
No 358
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.92 E-value=4.2e-25 Score=257.31 Aligned_cols=195 Identities=27% Similarity=0.366 Sum_probs=153.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|+||||++++|.+++... ..+++..+..++.|++.||+|||++||+||||||+||+++
T Consensus 55 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~ 134 (284)
T cd07836 55 LKHENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN 134 (284)
T ss_pred hcCCCEeeeeeeEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC
Confidence 5799999999999999999999999999999988653 3589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+++.++|+|||.+.....+.. ......++..|+|||.+.. ...++.++||||+||++|+|++|+
T Consensus 135 ~~~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~~l~~l~~g~ 198 (284)
T cd07836 135 KRGELKLADFGLARAFGIPVN-------TFSNEVVTLWYRAPDVLLG---------SRTYSTSIDIWSVGCIMAEMITGR 198 (284)
T ss_pred CCCcEEEeecchhhhhcCCcc-------ccccccccccccChHHhcC---------CCCCCcHHHHHHHHHHHHHHHhCC
Confidence 999999999998864422211 1122345778999998742 234678999999999999999999
Q ss_pred CCCCchHHHH----HHhcC--------------CCCCc-----------ccCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 158 PFFELSHLLA----YRRGQ--------------YDPSQ-----------HLEKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 158 ~pf~~~~~~~----~~~~~--------------~~~~~-----------~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
+||......+ ..... ..... .+....+..++++|.+||+.||.+||++.|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~ 278 (284)
T cd07836 199 PLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDA 278 (284)
T ss_pred CCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHH
Confidence 9986432111 10000 00000 0112235678999999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
++|
T Consensus 279 l~~ 281 (284)
T cd07836 279 LQH 281 (284)
T ss_pred hcC
Confidence 988
No 359
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.92 E-value=7.6e-24 Score=223.29 Aligned_cols=296 Identities=17% Similarity=0.256 Sum_probs=223.9
Q ss_pred eccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEE
Q 000470 1053 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHM 1132 (1472)
Q Consensus 1053 ~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~v 1132 (1472)
-|+||+.+++.|.++.+|.+|.||+.|.++.||-...+| ..-+|.+|.+.|+|+...-+++.+++|+.|.++++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGe------rlGty~GHtGavW~~Did~~s~~liTGSAD~t~kL 78 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGE------RLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKL 78 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCc------eeeeecCCCceEEEEEecCCcceeeeccccceeEE
Confidence 368999999999999999999999999999999988887 45688999999999999999999999999999999
Q ss_pred EEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeC-----CCeEEEEeCCCC-------Ccc
Q 000470 1133 FSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQ-----NCGIHLWDTRSN-------SNT 1200 (1472)
Q Consensus 1133 wdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~-----dg~I~iwDlrt~-------~~~ 1200 (1472)
||+.+.+ .....+.+.+|..+.|+.+ ++++++.+. .+.|.++|+|.. ++.
T Consensus 79 WDv~tGk---------------~la~~k~~~~Vk~~~F~~~---gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~ 140 (327)
T KOG0643|consen 79 WDVETGK---------------QLATWKTNSPVKRVDFSFG---GNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPY 140 (327)
T ss_pred EEcCCCc---------------EEEEeecCCeeEEEeeccC---CcEEEEEehhhcCcceEEEEEEccCChhhhcccCce
Confidence 9998521 1223345778899999998 667777665 357999999943 334
Q ss_pred ceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEE
Q 000470 1201 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1280 (1472)
Q Consensus 1201 ~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~va 1280 (1472)
..+.. +...++++.|+|.+.+|++|..+|.|..||++++..+..-...|...|+.+++ +++.. +++++
T Consensus 141 ~kI~t--~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~-s~d~T---------~FiT~ 208 (327)
T KOG0643|consen 141 LKIPT--PDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQF-SRDRT---------YFITG 208 (327)
T ss_pred EEecC--CccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccc-cCCcc---------eEEec
Confidence 44443 56889999999999999999999999999999986544433346678999998 77654 89999
Q ss_pred EcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccC
Q 000470 1281 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1360 (1472)
Q Consensus 1281 s~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~ 1360 (1472)
+.|.+.++||+.+.++++++.... +|++.+++
T Consensus 209 s~Dttakl~D~~tl~v~Kty~te~------------------------------------------------PvN~aais 240 (327)
T KOG0643|consen 209 SKDTTAKLVDVRTLEVLKTYTTER------------------------------------------------PVNTAAIS 240 (327)
T ss_pred ccCccceeeeccceeeEEEeeecc------------------------------------------------cccceecc
Confidence 999999999999999999987322 46777777
Q ss_pred CCC-cEE-EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCC
Q 000470 1361 PGG-DLL-TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDS 1438 (1472)
Q Consensus 1361 p~g-~ll-Tgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 1438 (1472)
|.. .++ -||.+-+ |+.+ -.+ ..+.=..-|| ...-......
T Consensus 241 P~~d~VilgGGqeA~----dVTT------T~~--r~GKFEArFy--------------------------h~i~eEEigr 282 (327)
T KOG0643|consen 241 PLLDHVILGGGQEAM----DVTT------TST--RAGKFEARFY--------------------------HLIFEEEIGR 282 (327)
T ss_pred cccceEEecCCceee----eeee------ecc--cccchhhhHH--------------------------HHHHHHHhcc
Confidence 754 444 4443311 1000 000 0000000111 0011112335
Q ss_pred CCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000470 1439 AGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1439 ~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVW 1471 (1472)
.++|-++|++|| |+|+|+..+||+.||.|+|.
T Consensus 283 vkGHFGPINsvA-fhPdGksYsSGGEDG~VR~h 314 (327)
T KOG0643|consen 283 VKGHFGPINSVA-FHPDGKSYSSGGEDGYVRLH 314 (327)
T ss_pred ccccccCcceeE-ECCCCcccccCCCCceEEEE
Confidence 678999999997 99999999999999999973
No 360
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.92 E-value=1.5e-24 Score=250.05 Aligned_cols=195 Identities=18% Similarity=0.173 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++|+||+++++++..++..|+||||++ |+|.+++.. ...+++.+++.++.||+.||.|||+.||+||||||+||+
T Consensus 59 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil 138 (267)
T cd08224 59 LDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVF 138 (267)
T ss_pred CCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEE
Confidence 579999999999999999999999999 699998853 345899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||.++........ .....++..|+|||.+. +..++.++|+||+||++|+|++
T Consensus 139 ~~~~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~il~~l~~ 201 (267)
T cd08224 139 ITATGVVKLGDLGLGRFFSSKTTA-------AHSLVGTPYYMSPERIH----------ENGYNFKSDIWSLGCLLYEMAA 201 (267)
T ss_pred ECCCCcEEEeccceeeeccCCCcc-------cceecCCccccCHHHhc----------cCCCCchhcHHHHHHHHHHHHH
Confidence 999999999999987654221110 11234677899999764 3357889999999999999999
Q ss_pred CCCCCCchH--HHHH----HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 156 EVPFFELSH--LLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 156 g~~pf~~~~--~~~~----~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
|..||.... .... ..+...+. .....+..++++|.+||..+|++||++.++++.++.
T Consensus 202 g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~ 264 (267)
T cd08224 202 LQSPFYGDKMNLYSLCKKIEKCDYPPL--PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKE 264 (267)
T ss_pred CCCCcccCCccHHHHHhhhhcCCCCCC--ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHH
Confidence 988885432 1111 12222111 122456789999999999999999999999987653
No 361
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.92 E-value=7.4e-25 Score=255.44 Aligned_cols=193 Identities=24% Similarity=0.233 Sum_probs=151.8
Q ss_pred CCCCCcceeeEEEEeCCe-----EEEEecccCCcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 000470 1 MSSTPCVHKKFWQETDKA-----AYLLRQYFFNSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~-----~~lV~Ey~~gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeN 73 (1472)
++||||+++++++..... .|++|||+.++|.+++...+ .+++.+++.++.|++.||.|||+.|++|+||||+|
T Consensus 58 ~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~n 137 (287)
T cd07838 58 FEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQN 137 (287)
T ss_pred cCCCCcceEEEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhh
Confidence 369999999999988776 99999999999999887643 48999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHH
Q 000470 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 74 ILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 153 (1472)
|+++.++.++|+|||.+........ .....++..|+|||.+. +..++.++|+||+||++|||
T Consensus 138 ili~~~~~~~l~dfg~~~~~~~~~~--------~~~~~~~~~~~~PE~~~----------~~~~~~~~Di~s~G~~l~~l 199 (287)
T cd07838 138 ILVTSDGQVKIADFGLARIYSFEMA--------LTSVVVTLWYRAPEVLL----------QSSYATPVDMWSVGCIFAEL 199 (287)
T ss_pred EEEccCCCEEEeccCcceeccCCcc--------cccccccccccChHHhc----------cCCCCCcchhhhHHHHHHHH
Confidence 9999999999999998876532211 12223577899999774 33567889999999999999
Q ss_pred HhCCCCCCchHHHH----HHhc-CC-----------------CC--C---cccCCCCCHHHHHHHHHhcccCcCCCCCHH
Q 000470 154 FLEVPFFELSHLLA----YRRG-QY-----------------DP--S---QHLEKIPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 154 ltg~~pf~~~~~~~----~~~~-~~-----------------~~--~---~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
++|.+||......+ +... .. .. . .......++.+.++|.+||+.||++||+++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~ 279 (287)
T cd07838 200 FRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAF 279 (287)
T ss_pred HhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHH
Confidence 99999996543221 1110 00 00 0 000011245788999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
|++.|
T Consensus 280 ~il~~ 284 (287)
T cd07838 280 EALQH 284 (287)
T ss_pred HHhcC
Confidence 99988
No 362
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.92 E-value=1.2e-24 Score=254.32 Aligned_cols=195 Identities=14% Similarity=0.036 Sum_probs=151.5
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCCcHHHHH---h--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEE
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRL---S--TPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVL 75 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l---~--~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNIL 75 (1472)
+||||+++++++..+...|++|||+.++|.++. . ....+++..+..++.|++.||+|||+ .||+||||||+||+
T Consensus 61 ~~~~iv~~~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil 140 (288)
T cd06616 61 DCPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNIL 140 (288)
T ss_pred CCCCEeeeeeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEE
Confidence 499999999999999999999999997665543 2 23568999999999999999999997 49999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++..+.++|+|||+++....+.. .....++..|+|||.+.... ...++.++||||+||++|||++
T Consensus 141 ~~~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~-------~~~~~~~~Di~slG~il~el~~ 205 (288)
T cd06616 141 LDRNGNIKLCDFGISGQLVDSIA--------KTRDAGCRPYMAPERIDPSA-------RDGYDVRSDVWSLGITLYEVAT 205 (288)
T ss_pred EccCCcEEEeecchhHHhccCCc--------cccccCccCccCHHHhcccc-------ccCCcchhhhhHHHHHHHHHHh
Confidence 99999999999999875432111 12234677899999875221 2367889999999999999999
Q ss_pred CCCCCCchH-H-HHHHhcCCCCCcc----cCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSH-L-LAYRRGQYDPSQH----LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~-~-~~~~~~~~~~~~~----l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|++||.... . ....+......+. .+...+..+.+||.+||+.||++||+++++++|
T Consensus 206 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 206 GKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 999986432 1 2222211111111 112356789999999999999999999999998
No 363
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.92 E-value=9.4e-25 Score=255.77 Aligned_cols=193 Identities=18% Similarity=0.234 Sum_probs=154.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.+..+...|++|||++ ++|.+++... .+++..++.++.|++.||+|||++|++||||||+||+++.+
T Consensus 74 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~ 152 (292)
T cd06657 74 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHD 152 (292)
T ss_pred cCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 579999999999999999999999999 5898887554 58999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+........ . .....++..|+|||.+. ...++.++|+||+||++|+|++|.+|
T Consensus 153 ~~~~l~dfg~~~~~~~~~~---~----~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slGvil~el~tg~~p 215 (292)
T cd06657 153 GRVKLSDFGFCAQVSKEVP---R----RKSLVGTPYWMAPELIS----------RLPYGPEVDIWSLGIMVIEMVDGEPP 215 (292)
T ss_pred CCEEEcccccceecccccc---c----ccccccCccccCHHHhc----------CCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999998765422111 0 12234678899999764 23567899999999999999999888
Q ss_pred CCchHHHH---HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|....... ................+..+.+++.+||+.||.+||++.++++|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 216 YFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred CCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 86543222 11111221111223356789999999999999999999999987
No 364
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.92 E-value=1.3e-24 Score=252.55 Aligned_cols=193 Identities=19% Similarity=0.154 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||++ ++|.+++... .+++.++..++.|++.|+.+||+.|++|+||||+||+++.+
T Consensus 59 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~ 137 (277)
T cd06641 59 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH 137 (277)
T ss_pred cCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCC
Confidence 579999999999999999999999999 5999988754 58999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++...... .......++..|+|||.+. ....+.++|+||+||++|+|++|.+|
T Consensus 138 ~~~~l~dfg~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~~l~~l~~g~~p 200 (277)
T cd06641 138 GEVKLADFGVAGQLTDTQ-------IKRNTFVGTPFWMAPEVIK----------QSAYDSKADIWSLGITAIELAKGEPP 200 (277)
T ss_pred CCEEEeecccceecccch-------hhhccccCCccccChhhhc----------cCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 999999999876542111 0112234677899999764 23567789999999999999999999
Q ss_pred CCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|............ ....+.+....+..+.++|.+||+.+|++||++.++++|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 201 HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 8644322221111 112223445567889999999999999999999999998
No 365
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.92 E-value=7.1e-25 Score=255.81 Aligned_cols=196 Identities=23% Similarity=0.314 Sum_probs=153.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcH-HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSL-RDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL-~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..++..|++|||+++++ ..+......+++.++..++.||+.||.|||++|++||||||+||+++.+
T Consensus 57 l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~ 136 (288)
T cd07833 57 LRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSES 136 (288)
T ss_pred cCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC
Confidence 479999999999999999999999999654 4445555669999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+......... ......++..|+|||.+.. ...++.++||||+||++|+|++|.+|
T Consensus 137 ~~~kl~d~g~~~~~~~~~~~------~~~~~~~~~~~~~PE~~~~---------~~~~~~~~Dv~slG~~l~~l~~g~~~ 201 (288)
T cd07833 137 GVLKLCDFGFARALRARPAS------PLTDYVATRWYRAPELLVG---------DTNYGKPVDVWAIGCIMAELLDGEPL 201 (288)
T ss_pred CCEEEEeeecccccCCCccc------cccCcccccCCcCCchhcC---------CCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 99999999998765332210 1123346778999998752 12568899999999999999999999
Q ss_pred CCchHHHH----HHh----------------cCCCC----C--------cccCCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 000470 160 FELSHLLA----YRR----------------GQYDP----S--------QHLEKIPDSGIRKMILHMIQLEPELRFSAES 207 (1472)
Q Consensus 160 f~~~~~~~----~~~----------------~~~~~----~--------~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~e 207 (1472)
|....... ... ..+.. . ...+...+..+++||.+||..+|++||++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 281 (288)
T cd07833 202 FPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDE 281 (288)
T ss_pred CCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHH
Confidence 86432111 100 00000 0 0122234678999999999999999999999
Q ss_pred HHHH
Q 000470 208 YLQN 211 (1472)
Q Consensus 208 lL~~ 211 (1472)
+++|
T Consensus 282 il~~ 285 (288)
T cd07833 282 LLQH 285 (288)
T ss_pred HhcC
Confidence 9988
No 366
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.92 E-value=3.2e-25 Score=264.43 Aligned_cols=198 Identities=21% Similarity=0.303 Sum_probs=157.0
Q ss_pred CCCCCcceeeEEEEeCC-----eEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDK-----AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~-----~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++.... ..|++|||++++|.+++..+..+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nil 135 (330)
T cd07834 56 LRHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNIL 135 (330)
T ss_pred cCCcchhhhhhhhcccCcccccceEEEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 57999999999998775 8999999999999999988778999999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||.+........... ......++..|+|||.+... ..++.++|+||+||++|+|++
T Consensus 136 i~~~~~~~L~dfg~~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~---------~~~~~~sDi~slG~il~~l~~ 202 (330)
T cd07834 136 VNSNCDLKICDFGLARGVDPDEDEKG----FLTEYVVTRWYRAPELLLSS---------SRYTKAIDIWSVGCIFAELLT 202 (330)
T ss_pred EcCCCCEEEcccCceEeecccccccc----cccccccccCcCCceeeecc---------cCCCcchhHHHHHHHHHHHHc
Confidence 99999999999999876543321111 12233467889999987521 257889999999999999999
Q ss_pred CCCCCCchHHHHH----HhcCCCCC---------------------------cccCCCCCHHHHHHHHHhcccCcCCCCC
Q 000470 156 EVPFFELSHLLAY----RRGQYDPS---------------------------QHLEKIPDSGIRKMILHMIQLEPELRFS 204 (1472)
Q Consensus 156 g~~pf~~~~~~~~----~~~~~~~~---------------------------~~l~~~~~~~l~~LI~~mL~~dP~~Rps 204 (1472)
|.+||........ ......+. .......+..+.++|.+||+.||++||+
T Consensus 203 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 282 (330)
T cd07834 203 RKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRIT 282 (330)
T ss_pred CCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCC
Confidence 9999964432211 11000000 0011224578999999999999999999
Q ss_pred HHHHHHH
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~elL~~ 211 (1472)
++++++|
T Consensus 283 ~~~ll~~ 289 (330)
T cd07834 283 ADEALAH 289 (330)
T ss_pred HHHHHhC
Confidence 9999988
No 367
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.92 E-value=9.7e-25 Score=250.08 Aligned_cols=194 Identities=22% Similarity=0.246 Sum_probs=156.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++.++.+...|+|+||++ ++|.+++.... .+++..++.++.|++.||.|||++|++|+||||+||+++
T Consensus 56 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~ 135 (257)
T cd08225 56 MKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLS 135 (257)
T ss_pred CCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEc
Confidence 579999999999999999999999998 59999987643 479999999999999999999999999999999999999
Q ss_pred cCC-cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 78 SWN-WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 78 ~~~-~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+++ .++|+|||.+........ ......|++.|+|||.+. ...++.++|+||+||+++||++|
T Consensus 136 ~~~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~ape~~~----------~~~~~~~~Dv~slG~il~~l~~g 198 (257)
T cd08225 136 KNGMVAKLGDFGIARQLNDSME-------LAYTCVGTPYYLSPEICQ----------NRPYNNKTDIWSLGCVLYELCTL 198 (257)
T ss_pred CCCCeEEecccccchhccCCcc-------cccccCCCccccCHHHHc----------CCCCCchhhHHHHHHHHHHHHhC
Confidence 886 469999998865422111 112334678899999764 33578899999999999999999
Q ss_pred CCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+||......+...... ..........+..++++|.+||..+|++||++.|+++|
T Consensus 199 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 199 KHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 99987554333222111 11222334456789999999999999999999999998
No 368
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.92 E-value=1.9e-24 Score=247.13 Aligned_cols=196 Identities=19% Similarity=0.190 Sum_probs=160.2
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++.+... ...|+++||++ ++|.+++...+.+++.++..++.|++.||.|||+.|++||||+|+||+++
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~ 135 (260)
T cd06606 56 LQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD 135 (260)
T ss_pred cCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc
Confidence 5799999999999988 89999999997 69999998877899999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.+......... .......++..|+|||.+. ....+.++|||||||++|+|++|.
T Consensus 136 ~~~~~~l~d~~~~~~~~~~~~~-----~~~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~~l~~g~ 200 (260)
T cd06606 136 SDGVVKLADFGCAKRLGDIETG-----EGTGSVRGTPYWMAPEVIR----------GEEYGRAADIWSLGCTVIEMATGK 200 (260)
T ss_pred CCCCEEEcccccEEeccccccc-----ccccCCCCCccccCHhhhc----------CCCCCchhhHHHHHHHHHHHHhCC
Confidence 9999999999988765332210 1123345678899999764 234788999999999999999998
Q ss_pred CCCCchH--HHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSH--LLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~--~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.||.... ........ ......++...+..++++|.+||+.||++||++.|+++|
T Consensus 201 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 201 PPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred CCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 8886543 11111111 122233455557899999999999999999999999998
No 369
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.92 E-value=1.7e-24 Score=255.71 Aligned_cols=191 Identities=18% Similarity=0.186 Sum_probs=153.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++|||++++++++..+...|+||||+.|+|.+.+.. ...+++.++..++.|++.||.|||++|++||||||+||+++.+
T Consensus 72 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~ 151 (308)
T cd06634 72 LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP 151 (308)
T ss_pred CCCCCcccEEEEEEcCCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCC
Confidence 579999999999999999999999999999888754 4458999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+...... ....++..|+|||.+... ....++.++|||||||++|+|++|.+|
T Consensus 152 ~~~kl~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~-------~~~~~~~~~Di~slG~il~el~~g~~p 213 (308)
T cd06634 152 GLVKLGDFGSASIMAPA-----------NXFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPP 213 (308)
T ss_pred CcEEECCcccceeecCc-----------ccccCCccccCHHHHhhc-------ccCCCCcccchHHHHHHHHHHHcCCCC
Confidence 99999999987644211 123457789999987421 123567899999999999999999877
Q ss_pred CCchH-HH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH-LL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~-~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.... .. .+..... ........+..+++||.+||+.+|++||+++++++|
T Consensus 214 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 214 LFNMNAMSALYHIAQNES--PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred CccccHHHHHHHHhhcCC--CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 74322 11 1222211 111233456789999999999999999999999998
No 370
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.92 E-value=2e-24 Score=246.67 Aligned_cols=194 Identities=23% Similarity=0.255 Sum_probs=158.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+.||||+++++++.++...|++|||++ ++|.+++.....+++..+..++.|++.||.+||+.||+||||||+||+++.+
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~ 135 (254)
T cd06627 56 LKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKD 135 (254)
T ss_pred CCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCC
Confidence 479999999999999999999999999 5999999887889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+......... .....++..|+|||.+. ...++.++||||+|+++|+|++|.+|
T Consensus 136 ~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~~lG~~l~~l~~g~~p 198 (254)
T cd06627 136 GVVKLADFGVATKLNDVSKD-------DASVVGTPYWMAPEVIE----------MSGASTASDIWSLGCTVIELLTGNPP 198 (254)
T ss_pred CCEEEeccccceecCCCccc-------ccccccchhhcCHhhhc----------CCCCCcchhHHHHHHHHHHHHhCCCC
Confidence 99999999988765322111 12234677899999764 22367899999999999999999888
Q ss_pred CCch-HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELS-HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~-~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|... ....+..........++...+..+++++.+||..+|++||++.+++.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 199 YYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred CCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 8532 222222222222233455667889999999999999999999999987
No 371
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.92 E-value=1.6e-24 Score=246.70 Aligned_cols=192 Identities=22% Similarity=0.226 Sum_probs=155.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+++||++ ++|.+++... ..+++.++..++.|++.||.+||++|++||||+|+||+++.
T Consensus 54 l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~ 133 (253)
T cd05122 54 CKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTS 133 (253)
T ss_pred CCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEcc
Confidence 579999999999999999999999999 6999999876 57999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.+........ .....++..|+|||.+. ...++.++|+||+||++|+|++|.+
T Consensus 134 ~~~~~l~d~~~~~~~~~~~~--------~~~~~~~~~~~~PE~~~----------~~~~~~~~Dv~slG~il~~l~~g~~ 195 (253)
T cd05122 134 DGEVKLIDFGLSAQLSDTKA--------RNTMVGTPYWMAPEVIN----------GKPYDYKADIWSLGITAIELAEGKP 195 (253)
T ss_pred CCeEEEeecccccccccccc--------ccceecCCcccCHHHHc----------CCCCCccccHHHHHHHHHHHHhCCC
Confidence 99999999998765532211 12334677899999764 2346889999999999999999988
Q ss_pred CCCchHH-HHH-HhcCCCCCcccCC--CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHL-LAY-RRGQYDPSQHLEK--IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~-~~~-~~~~~~~~~~l~~--~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||..... ... .... .....+.. ..+..+.++|.+||+.||++||++.|+++|
T Consensus 196 p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 196 PYSELPPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred CCCCCchHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 8865421 111 1111 11111222 226789999999999999999999999988
No 372
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.92 E-value=1.7e-24 Score=252.67 Aligned_cols=193 Identities=18% Similarity=0.186 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++.+..+...|+++||++ ++|.+++...+ .+++.++..++.|++.||.|||+.||+|+||||+||+++.
T Consensus 72 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~ 151 (286)
T cd06614 72 CKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSK 151 (286)
T ss_pred CCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcC
Confidence 579999999999999999999999999 69999998876 7999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.+......... .....++..|+|||.+. +..++.++|+||+||++|+|++|.+
T Consensus 152 ~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slGvil~~l~~g~~ 214 (286)
T cd06614 152 DGSVKLADFGFAAQLTKEKSK-------RNSVVGTPYWMAPEVIK----------RKDYGPKVDIWSLGIMCIEMAEGEP 214 (286)
T ss_pred CCCEEECccchhhhhccchhh-------hccccCCcccCCHhHhc----------CCCCCCccccHHHHHHHHHHHhCCC
Confidence 999999999987644222110 12223577899999764 2356889999999999999999998
Q ss_pred CCCchHHHH-H---HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLA-Y---RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~-~---~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||....... . ...... ........+..++++|.+||+.+|.+||++.++++|
T Consensus 215 p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 215 PYLREPPLRALFLITTKGIP-PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred CCCCCCHHHHHHHHHhcCCC-CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 886543221 1 111111 111222356789999999999999999999999987
No 373
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.92 E-value=1.9e-24 Score=252.02 Aligned_cols=197 Identities=19% Similarity=0.146 Sum_probs=149.2
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||+++++++.. ....|+||||++ |+|.+++.. +..+++..+..++.|++.||.|||++||+||||||+||++
T Consensus 62 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili 141 (284)
T cd05081 62 LQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV 141 (284)
T ss_pred CCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE
Confidence 579999999997643 357899999998 699999965 4568999999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++.++|+|||+++....... .........++..|+|||.+. +..++.++|||||||++|||++|
T Consensus 142 ~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~ 207 (284)
T cd05081 142 ESENRVKIGDFGLTKVLPQDKE----YYKVREPGESPIFWYAPESLT----------ESKFSVASDVWSFGVVLYELFTY 207 (284)
T ss_pred CCCCeEEECCCcccccccCCCc----ceeecCCCCCceEeeCHHHhc----------cCCcChHHHHHHHHHHHHHHhhc
Confidence 9999999999999875522111 100111122345699999764 33578899999999999999998
Q ss_pred CCCCCchHHHH-------------------HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLA-------------------YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~-------------------~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
..++....... ..... .....+...+..+.+||.+||..+|++|||+.|+++.+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05081 208 SDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN--GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVE 281 (284)
T ss_pred CCcCCCcchhhhhhcccccccccchHHHHHHHhcC--CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 55543221110 01111 111123345678999999999999999999999998864
No 374
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.92 E-value=1.8e-23 Score=230.19 Aligned_cols=282 Identities=18% Similarity=0.249 Sum_probs=217.8
Q ss_pred cccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC---CCEEEEEeCCCcEEEE
Q 000470 1057 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH---SAQVVVGACDGIIHMF 1133 (1472)
Q Consensus 1057 H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~---~~~las~s~DG~I~vw 1133 (1472)
|.+.|.++... +++++||+.||++++||... +...++.+|+++|.+++|.-- ...|++||.|.++++|
T Consensus 104 hdDWVSsv~~~--~~~IltgsYDg~~riWd~~G-------k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw 174 (423)
T KOG0313|consen 104 HDDWVSSVKGA--SKWILTGSYDGTSRIWDLKG-------KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLW 174 (423)
T ss_pred chhhhhhhccc--CceEEEeecCCeeEEEecCC-------ceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEE
Confidence 88899998887 78999999999999999864 266788999999999888643 3369999999999999
Q ss_pred EccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCC----------------
Q 000470 1134 SVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN---------------- 1197 (1472)
Q Consensus 1134 dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~---------------- 1197 (1472)
.++... .....+ ....+|...|.++...++ +..+++|+.|.+|.+|+..+.
T Consensus 175 ~~~~~~---------~~~~~~-~~~~GHk~~V~sVsv~~s---gtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~ 241 (423)
T KOG0313|consen 175 KWNVGE---------NKVKAL-KVCRGHKRSVDSVSVDSS---GTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQ 241 (423)
T ss_pred EecCch---------hhhhHH-hHhcccccceeEEEecCC---CCeEEeecccceeeecccCCCccccccccchhhhhhh
Confidence 987311 011111 111267778888888887 779999999999999993210
Q ss_pred ---------CccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCc
Q 000470 1198 ---------SNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAA 1268 (1472)
Q Consensus 1198 ---------~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~ 1268 (1472)
..+-++. +|.+.|.++.|++ ...+.+++.|.+|+.||+.++..+..... ...+.++.+ +|..
T Consensus 242 ~~~~~~~~r~P~vtl~--GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~--~ksl~~i~~-~~~~--- 312 (423)
T KOG0313|consen 242 KREKEGGTRTPLVTLE--GHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT--NKSLNCISY-SPLS--- 312 (423)
T ss_pred hhhhcccccCceEEec--ccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec--CcceeEeec-cccc---
Confidence 1122333 4899999999998 67899999999999999999988877654 346778877 6644
Q ss_pred cccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCC
Q 000470 1269 VSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPP 1348 (1472)
Q Consensus 1269 ~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1348 (1472)
.++++|+.|..+++||-+++.-..+-. ...
T Consensus 313 ------~Ll~~gssdr~irl~DPR~~~gs~v~~--------------------------------------------s~~ 342 (423)
T KOG0313|consen 313 ------KLLASGSSDRHIRLWDPRTGDGSVVSQ--------------------------------------------SLI 342 (423)
T ss_pred ------ceeeecCCCCceeecCCCCCCCceeEE--------------------------------------------eee
Confidence 489999999999999988763221111 114
Q ss_pred CCcCCceEeccCCCC--cEEEccCCCeEEEEeCCCCC-CceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhh
Q 000470 1349 PRLLGIRSLLPLPGG--DLLTGGTDLKIRRWDHCSPG-RSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKL 1425 (1472)
Q Consensus 1349 ~~~~~V~sl~~~p~g--~llTgg~Dg~IrlWDl~~~~-~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 1425 (1472)
+|...|.++.|+|.. .|++|+.|+++++||+++.+ ..|.+.
T Consensus 343 gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~------------------------------------ 386 (423)
T KOG0313|consen 343 GHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIA------------------------------------ 386 (423)
T ss_pred cchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeec------------------------------------
Confidence 566689999999987 67799999999999998776 334333
Q ss_pred hhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1426 TAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1426 ~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+|.|.|.++. |+ .+.+|+|||.|..|+|++
T Consensus 387 ---------------~h~DKvl~vd-W~-~~~~IvSGGaD~~l~i~~ 416 (423)
T KOG0313|consen 387 ---------------GHNDKVLSVD-WN-EGGLIVSGGADNKLRIFK 416 (423)
T ss_pred ---------------cCCceEEEEe-cc-CCceEEeccCcceEEEec
Confidence 3999999995 64 456899999999999985
No 375
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.92 E-value=1.5e-24 Score=263.81 Aligned_cols=195 Identities=15% Similarity=0.161 Sum_probs=153.4
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--------------------------------------------
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-------------------------------------------- 37 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-------------------------------------------- 37 (1472)
||||+++++++..++..|+||||+. |+|.+++...
T Consensus 100 H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T cd05107 100 HLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYM 179 (401)
T ss_pred CCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCcccc
Confidence 9999999999999999999999999 7999998542
Q ss_pred ------------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 000470 38 ------------------------------------------------------PFLSLVEKKWLAFQLLLAVKQCHEKG 63 (1472)
Q Consensus 38 ------------------------------------------------------~~l~~~~~~~i~~Qll~aL~~LH~~g 63 (1472)
+.++...+..++.||+.||+|||+.|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ 259 (401)
T cd05107 180 DMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN 259 (401)
T ss_pred ccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 23567788899999999999999999
Q ss_pred CeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchH
Q 000470 64 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 143 (1472)
Q Consensus 64 IvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DI 143 (1472)
|+||||||+|||++..+.++|+|||+++......... ......++..|+|||.+. ...++.++||
T Consensus 260 ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv 324 (401)
T cd05107 260 CVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYI-----SKGSTFLPLKWMAPESIF----------NNLYTTLSDV 324 (401)
T ss_pred cCcccCCcceEEEeCCCEEEEEecCcceecccccccc-----cCCCcCCCCceeChHHhc----------CCCCCcHhHH
Confidence 9999999999999999999999999987542211100 011223567799999764 2356889999
Q ss_pred HHHHHHHHHHHh-CCCCCCchHH----HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 144 FAVGCVIAELFL-EVPFFELSHL----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 144 wSlG~il~eLlt-g~~pf~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||+||++|||++ |.+||..... ......... ...+...+..+.+|+.+||..+|.+||++.|+++.++.
T Consensus 325 wslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 325 WSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYR--MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 999999999998 7888854221 122222221 22344567899999999999999999999999998654
No 376
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.92 E-value=1.2e-24 Score=259.72 Aligned_cols=198 Identities=19% Similarity=0.234 Sum_probs=153.6
Q ss_pred CCCCcceeeEEEEeC----CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 2 SSTPCVHKKFWQETD----KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~----~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
+||||+++++..... ...|+++||++++|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++
T Consensus 60 ~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~ 139 (332)
T cd07857 60 GHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN 139 (332)
T ss_pred CCCChheeeeeeeeccccCCcEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc
Confidence 599999999875432 4689999999999999998877899999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.++......... ........|+..|+|||.+.. ...++.++||||+||++|+|++|.
T Consensus 140 ~~~~~kl~Dfg~a~~~~~~~~~~---~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~~Di~slGv~l~~l~~g~ 207 (332)
T cd07857 140 ADCELKICDFGLARGFSENPGEN---AGFMTEYVATRWYRAPEIMLS---------FQSYTKAIDVWSVGCILAELLGRK 207 (332)
T ss_pred CCCCEEeCcCCCceecccccccc---cccccCcccCccccCcHHHhC---------CCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99999999999987653221111 111223457888999997641 235788999999999999999999
Q ss_pred CCCCchHHHHH----Hh-----------------------c--CC--CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHH
Q 000470 158 PFFELSHLLAY----RR-----------------------G--QY--DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 158 ~pf~~~~~~~~----~~-----------------------~--~~--~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
+||...+.... .. . .. ..........+..+++|+.+||+.||++||+++
T Consensus 208 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ 287 (332)
T cd07857 208 PVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVE 287 (332)
T ss_pred cCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence 99964321110 00 0 00 000111223467899999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
|+++|
T Consensus 288 ~ll~~ 292 (332)
T cd07857 288 EALEH 292 (332)
T ss_pred HHhcC
Confidence 99987
No 377
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.92 E-value=1e-24 Score=249.62 Aligned_cols=192 Identities=21% Similarity=0.284 Sum_probs=159.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++..+...|+||||++ ++|.+++.. ...+++.++..++.|++.||.|||+.|++||||||+||+
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~ 135 (256)
T cd08530 56 VNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANIL 135 (256)
T ss_pred CCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEE
Confidence 579999999999999999999999998 599998865 356899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||+++..... ......++..|+|||.+. +..++.++|+||+|+++|+|++
T Consensus 136 ~~~~~~~kl~d~g~~~~~~~~---------~~~~~~~~~~~~~Pe~~~----------~~~~~~~~D~~slG~~~~~l~~ 196 (256)
T cd08530 136 LVANDLVKIGDLGISKVLKKN---------MAKTQIGTPHYMAPEVWK----------GRPYSYKSDIWSLGCLLYEMAT 196 (256)
T ss_pred EecCCcEEEeeccchhhhccC---------CcccccCCccccCHHHHC----------CCCCCchhhHHHHHHHHHHHHh
Confidence 999999999999998765322 112344678899999874 3356789999999999999999
Q ss_pred CCCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|++||.......+..... .....++...+.++++++.+||..+|++||++.|+++|
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 197 FAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 999997665544332211 11223444567889999999999999999999999988
No 378
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.92 E-value=1.5e-24 Score=248.13 Aligned_cols=194 Identities=24% Similarity=0.238 Sum_probs=160.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++|||++++.+.+..+...|+|+||++ ++|.+++... ..+++.++..++.|++.||.+||++|++|+||+|+||+
T Consensus 56 l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil 135 (258)
T cd08215 56 LNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIF 135 (258)
T ss_pred cCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeE
Confidence 579999999999999999999999999 5999999764 66999999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||.+....... .......+++.|+|||.+. ...++.++|+||+|+++++|++
T Consensus 136 ~~~~~~~~l~d~~~~~~~~~~~-------~~~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~~~~~l~~ 198 (258)
T cd08215 136 LTSNGLVKLGDFGISKVLSSTV-------DLAKTVVGTPYYLSPELCQ----------NKPYNYKSDIWSLGCVLYELCT 198 (258)
T ss_pred EcCCCcEEECCccceeecccCc-------ceecceeeeecccChhHhc----------cCCCCccccHHHHHHHHHHHHc
Confidence 9999999999999887543221 1223345778899999764 3357789999999999999999
Q ss_pred CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.+||.......+.... ......++...+..+.+++.+||..+|++||++.|+++|
T Consensus 199 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 199 LKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 99999765443332211 112233455667889999999999999999999999988
No 379
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.92 E-value=1.7e-24 Score=248.83 Aligned_cols=196 Identities=15% Similarity=0.092 Sum_probs=152.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++. +...|++|||+. ++|.+++... ..+++.++..++.|++.||+|||+.|++||||||+||+++
T Consensus 58 l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~ 136 (260)
T cd05067 58 LQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS 136 (260)
T ss_pred cCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc
Confidence 57999999999874 457899999998 6999998653 3589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
+++.++|+|||.+......... ......++..|+|||.+. ...++.++|||||||++|||++ |
T Consensus 137 ~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~~pe~~~----------~~~~~~~~Di~slG~~l~el~~~g 200 (260)
T cd05067 137 ETLCCKIADFGLARLIEDNEYT------AREGAKFPIKWTAPEAIN----------YGTFTIKSDVWSFGILLTEIVTYG 200 (260)
T ss_pred CCCCEEEccCcceeecCCCCcc------cccCCcccccccCHHHhc----------cCCcCcccchHHHHHHHHHHHhCC
Confidence 9999999999988654311110 011223456799999764 3357889999999999999998 8
Q ss_pred CCCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
++||.......... .........+...+..+.++|.+||..+|++||+++++++.++
T Consensus 201 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 201 RIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred CCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 99996443222211 1111112234456678999999999999999999999998653
No 380
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.92 E-value=2e-24 Score=249.66 Aligned_cols=192 Identities=17% Similarity=0.226 Sum_probs=156.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNI 74 (1472)
++||||+++++++..+...|++|||++ ++|.+++. ....+++..++.++.|++.||.|||+ .|++||||||+||
T Consensus 66 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~ni 145 (269)
T cd08528 66 LRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNI 145 (269)
T ss_pred CCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHE
Confidence 479999999999999999999999999 59988873 23468999999999999999999996 7899999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
++++++.++|+|||.+....... ......++..|+|||.+. ...++.++|+||||+++|||+
T Consensus 146 l~~~~~~~~l~dfg~~~~~~~~~--------~~~~~~~~~~~~~Pe~~~----------~~~~~~~~Dv~slG~ll~~l~ 207 (269)
T cd08528 146 MLGEDDKVTITDFGLAKQKQPES--------KLTSVVGTILYSCPEIVK----------NEPYGEKADVWAFGCILYQMC 207 (269)
T ss_pred EECCCCcEEEecccceeeccccc--------ccccccCcccCcChhhhc----------CCCCchHHHHHHHHHHHHHHH
Confidence 99999999999999987542211 123345678899999774 235788999999999999999
Q ss_pred hCCCCCCchHHHHHH----hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 155 LEVPFFELSHLLAYR----RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 155 tg~~pf~~~~~~~~~----~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+|++||......... ...+.+ ......++.+.++|.+||+.||++||++.|+..++
T Consensus 208 ~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~ 267 (269)
T cd08528 208 TLQPPFYSTNMLSLATKIVEAVYEP--LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMI 267 (269)
T ss_pred hCCCcccccCHHHHHHHHhhccCCc--CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHh
Confidence 999999765443222 222221 12224567899999999999999999999999875
No 381
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.92 E-value=1.1e-24 Score=253.92 Aligned_cols=196 Identities=27% Similarity=0.388 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++|||++++++++..+ +..|+|+||++++|.+++... ..+++.+++.++.||+.||+|||++|++|+||||+||+++
T Consensus 55 l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~ 134 (287)
T cd07840 55 LRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN 134 (287)
T ss_pred ccCCCeeeheeeEecCCCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc
Confidence 4799999999999988 899999999999999998775 5689999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+++.++|+|||.+......... ......++..|+|||.+.+ ...++.++|||||||++|||++|+
T Consensus 135 ~~~~~~l~d~g~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~~l~el~t~~ 199 (287)
T cd07840 135 NDGVLKLADFGLARPYTKRNSA------DYTNRVITLWYRPPELLLG---------ATRYGPEVDMWSVGCILAELFLGK 199 (287)
T ss_pred CCCCEEEccccceeeccCCCcc------cccccccccccCCceeeEc---------cccCChHHHHHHHHHHHHHHHhCC
Confidence 9999999999998765433211 1122335678999997642 224688999999999999999999
Q ss_pred CCCCchHHHH----HHhcCCCC-------------------C--------cccCCCCCHHHHHHHHHhcccCcCCCCCHH
Q 000470 158 PFFELSHLLA----YRRGQYDP-------------------S--------QHLEKIPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 158 ~pf~~~~~~~----~~~~~~~~-------------------~--------~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
+||....... .......+ . ..+....++.+.++|.+||..||++||+++
T Consensus 200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~ 279 (287)
T cd07840 200 PIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISAD 279 (287)
T ss_pred CCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHH
Confidence 9986433211 11100000 0 001112367899999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
++++|
T Consensus 280 ~~l~~ 284 (287)
T cd07840 280 QALQH 284 (287)
T ss_pred HHhhC
Confidence 99987
No 382
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.3e-25 Score=263.89 Aligned_cols=196 Identities=16% Similarity=0.155 Sum_probs=159.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
|+|||||+||++...+..+|+|||+|. |+|.++|.+.+ .++..++.+++++.++||+|||+++++||||-.+|+|++.
T Consensus 218 l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~ 297 (474)
T KOG0194|consen 218 LNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSK 297 (474)
T ss_pred CCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecC
Confidence 689999999999999999999999999 69999999877 4999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
.+.+||+|||+++... .+..--....-...|+|||.+. ...|+.++||||+||++||+++ |.
T Consensus 298 ~~~vKISDFGLs~~~~-------~~~~~~~~~klPirWLAPEtl~----------~~~~s~kTDV~sfGV~~~Eif~~g~ 360 (474)
T KOG0194|consen 298 KGVVKISDFGLSRAGS-------QYVMKKFLKKLPIRWLAPETLN----------TGIFSFKTDVWSFGVLLWEIFENGA 360 (474)
T ss_pred CCeEEeCccccccCCc-------ceeeccccccCcceecChhhhc----------cCccccccchhheeeeEEeeeccCC
Confidence 9999999999977542 0100000112356799999764 4488999999999999999999 66
Q ss_pred CCCCchHHHHHHhcC-C-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLLAYRRGQ-Y-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~-~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.||..-+....+... . ......+...+..+..++.+|+..||++||++.++.+.+.
T Consensus 361 ~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 361 EPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred CCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 688765544443322 1 1122344466778999999999999999999999998743
No 383
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.92 E-value=1.3e-23 Score=224.71 Aligned_cols=303 Identities=15% Similarity=0.181 Sum_probs=229.3
Q ss_pred eeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCc---------cccc---cccceEEeccCCceEEEEEecCC
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE---------KDIS---FRSRLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1051 V~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e---------~~~~---~~~~~t~~~~~~~I~~v~f~~~~ 1118 (1472)
-..+..|++++.+-+|||||.++||||.|-+|||.|+.++- .+.+ ..-..++-.|...|+++.|+|..
T Consensus 105 t~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre 184 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE 184 (430)
T ss_pred eEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh
Confidence 45788999999999999999999999999999999998421 1111 11234555678889999999999
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeec-CCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKD-TKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN 1197 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~ 1197 (1472)
+.|++|+.|++|++||..... ..+.+. ..+-..+.++.|+|. |.+|++|+....+++||+.+-
T Consensus 185 ~ILiS~srD~tvKlFDfsK~s-------------aKrA~K~~qd~~~vrsiSfHPs---GefllvgTdHp~~rlYdv~T~ 248 (430)
T KOG0640|consen 185 TILISGSRDNTVKLFDFSKTS-------------AKRAFKVFQDTEPVRSISFHPS---GEFLLVGTDHPTLRLYDVNTY 248 (430)
T ss_pred heEEeccCCCeEEEEecccHH-------------HHHHHHHhhccceeeeEeecCC---CceEEEecCCCceeEEeccce
Confidence 999999999999999986210 001111 134467889999998 889999999999999999998
Q ss_pred Cccc-eeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccC-CceeEEeecCCCCCccccCCCC
Q 000470 1198 SNTW-TLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVC-PIEKMCLFVPPPNAAVSTTARP 1275 (1472)
Q Consensus 1198 ~~~~-~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~-~I~~l~~~~p~~~~~~~~~~~~ 1275 (1472)
++.- ......|.+.|+++.+++.|+..++|+.||.|++||=-.+.|+.++...|.+ .|.+..| . .+++
T Consensus 249 QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~F-t---------kn~k 318 (430)
T KOG0640|consen 249 QCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVF-T---------KNGK 318 (430)
T ss_pred eEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEE-c---------cCCe
Confidence 7743 2344568999999999999999999999999999999999999999876654 5666666 3 3467
Q ss_pred EEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCce
Q 000470 1276 LIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIR 1355 (1472)
Q Consensus 1276 ~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~ 1355 (1472)
++++.+.|..|++|++.+|.+++.+......+... --+
T Consensus 319 yiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~------------------------------------------~rt 356 (430)
T KOG0640|consen 319 YILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQK------------------------------------------HRT 356 (430)
T ss_pred EEeecCCcceeeeeeecCCceEEEEecCCcccchh------------------------------------------hhh
Confidence 99999999999999999999999987433211000 001
Q ss_pred EeccCCC-CcEEEcc-CCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhh
Q 000470 1356 SLLPLPG-GDLLTGG-TDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAA 1433 (1472)
Q Consensus 1356 sl~~~p~-g~llTgg-~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 1433 (1472)
...|... .+++.-. ..+.+.-||-++..+...+
T Consensus 357 qAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~--------------------------------------------- 391 (430)
T KOG0640|consen 357 QAVFNHTEDYVLFPDEASNSLCSWDARTADRVALL--------------------------------------------- 391 (430)
T ss_pred hhhhcCccceEEccccccCceeeccccchhhhhhc---------------------------------------------
Confidence 1112222 2444333 3677888997766553211
Q ss_pred hhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1434 AATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1434 ~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.-+|.+++..+ .-+|.++.++|||.|-.+++|.
T Consensus 392 -----slgHn~a~R~i-~HSP~~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 392 -----SLGHNGAVRWI-VHSPVEPAFMTCSDDFRARFWY 424 (430)
T ss_pred -----ccCCCCCceEE-EeCCCCCceeeecccceeeeee
Confidence 12599999999 4678899999999999999995
No 384
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.92 E-value=1.8e-24 Score=253.88 Aligned_cols=196 Identities=15% Similarity=0.124 Sum_probs=153.4
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEccC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~~~ 79 (1472)
+||||+++++++.++...|++|||+.++|.+.+.. ...+++..+..++.||+.||.|||+ .||+||||||+||+++.+
T Consensus 72 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~ 151 (296)
T cd06618 72 DCPYIVKCYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDAS 151 (296)
T ss_pred CCCchHhhheeeecCCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCC
Confidence 59999999999999999999999999888777655 4468999999999999999999997 699999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+........ .....++..|+|||.+.... ....++.++|||||||++|+|++|++|
T Consensus 152 ~~~kL~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~------~~~~~~~~~Di~slG~il~el~~g~~p 217 (296)
T cd06618 152 GNVKLCDFGISGRLVDSKA--------KTRSAGCAAYMAPERIDPPD------PNPKYDIRADVWSLGISLVELATGQFP 217 (296)
T ss_pred CCEEECccccchhccCCCc--------ccCCCCCccccCHhhcCCCC------CccccccchhHHHHHHHHHHHHhCCCC
Confidence 9999999998765421111 11223567899999875221 124578899999999999999999999
Q ss_pred CCchH--HHHHHhcCCC--CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH--LLAYRRGQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~--~~~~~~~~~~--~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.... ...+.+.... +........+.++++||.+||..||++||+++++++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 218 YKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 86521 1222211111 1111122356789999999999999999999999988
No 385
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.92 E-value=8.6e-25 Score=258.13 Aligned_cols=202 Identities=22% Similarity=0.301 Sum_probs=151.4
Q ss_pred CCCCCcceeeEEEEeC--------CeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000470 1 MSSTPCVHKKFWQETD--------KAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--------~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKp 71 (1472)
++||||+++++++... ..+|+|+||+.++|.+.+.. ...+++.+++.++.||++||+|||++||+||||||
T Consensus 64 l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p 143 (311)
T cd07866 64 LKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKA 143 (311)
T ss_pred cCCCCccchhhheecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 5899999999987543 35799999999999888865 44699999999999999999999999999999999
Q ss_pred CCEEEccCCcEEEEeccccccccCCCCCCCC----CceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSD----FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 72 eNILv~~~~~vkL~DFg~a~~~~~~~~~~~~----~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
+||++++++.++|+|||+++........... ....+....+++.|+|||.+.. ...++.++||||+|
T Consensus 144 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG 214 (311)
T cd07866 144 ANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG---------ERRYTTAVDIWGIG 214 (311)
T ss_pred HHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhC---------CCccCchhHhHHHH
Confidence 9999999999999999988755332221110 0111123345778999997642 23578899999999
Q ss_pred HHHHHHHhCCCCCCchHHHH----HHh--cCCCC---------------------Cccc---CCCCCHHHHHHHHHhccc
Q 000470 148 CVIAELFLEVPFFELSHLLA----YRR--GQYDP---------------------SQHL---EKIPDSGIRKMILHMIQL 197 (1472)
Q Consensus 148 ~il~eLltg~~pf~~~~~~~----~~~--~~~~~---------------------~~~l---~~~~~~~l~~LI~~mL~~ 197 (1472)
|++|||++|++||....... +.. +...+ ...+ .....+.+.++|.+||+.
T Consensus 215 ~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 294 (311)
T cd07866 215 CVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSL 294 (311)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHccc
Confidence 99999999999996433211 100 00000 0000 011235788999999999
Q ss_pred CcCCCCCHHHHHHH
Q 000470 198 EPELRFSAESYLQN 211 (1472)
Q Consensus 198 dP~~Rpsa~elL~~ 211 (1472)
||++|||+.|++.|
T Consensus 295 ~p~~R~t~~ell~~ 308 (311)
T cd07866 295 DPYKRLTASDALEH 308 (311)
T ss_pred CcccCcCHHHHhcC
Confidence 99999999999988
No 386
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=7.9e-24 Score=231.96 Aligned_cols=256 Identities=18% Similarity=0.268 Sum_probs=218.4
Q ss_pred CCCcc-cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC
Q 000470 1041 DSGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1041 ~~~W~-p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~ 1119 (1472)
-..|+ -+|.+++.|+||+++|..|+|+..|+++||||.|-.+++||..+. ++++....+|...|.+++|.|.|+
T Consensus 132 ikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~-----~~c~ks~~gh~h~vS~V~f~P~gd 206 (406)
T KOG0295|consen 132 IKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTF-----FRCIKSLIGHEHGVSSVFFLPLGD 206 (406)
T ss_pred EEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHH-----HHHHHHhcCcccceeeEEEEecCC
Confidence 34688 579999999999999999999999999999999999999998753 345556678888899999999999
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~ 1199 (1472)
++++|+.|.+|+.|++++. -.......+...+.++..+.| |.++++++.|.+|++|-+.++++
T Consensus 207 ~ilS~srD~tik~We~~tg--------------~cv~t~~~h~ewvr~v~v~~D---Gti~As~s~dqtl~vW~~~t~~~ 269 (406)
T KOG0295|consen 207 HILSCSRDNTIKAWECDTG--------------YCVKTFPGHSEWVRMVRVNQD---GTIIASCSNDQTLRVWVVATKQC 269 (406)
T ss_pred eeeecccccceeEEecccc--------------eeEEeccCchHhEEEEEecCC---eeEEEecCCCceEEEEEeccchh
Confidence 9999999999999999841 112223356668888888888 88999999999999999999998
Q ss_pred cceeecCCCccceEEEEEcCC----------C-----CEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCC
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPC----------G-----NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPP 1264 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsl~~sp~----------g-----~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~ 1264 (1472)
...+.. |..+|.|++|.|. + ..+.+|+.|++|++||+.++.++-++.. |...|..+.| +|.
T Consensus 270 k~~lR~--hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~g-hdnwVr~~af-~p~ 345 (406)
T KOG0295|consen 270 KAELRE--HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVG-HDNWVRGVAF-SPG 345 (406)
T ss_pred hhhhhc--cccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEec-ccceeeeeEE-cCC
Confidence 888877 7889999999764 2 4899999999999999999999988775 7778999998 776
Q ss_pred CCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccccccccccc
Q 000470 1265 PNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDEL 1344 (1472)
Q Consensus 1265 ~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 1344 (1472)
++ +|++++.|++++|||+.+++|..++..
T Consensus 346 Gk---------yi~ScaDDktlrvwdl~~~~cmk~~~a------------------------------------------ 374 (406)
T KOG0295|consen 346 GK---------YILSCADDKTLRVWDLKNLQCMKTLEA------------------------------------------ 374 (406)
T ss_pred Ce---------EEEEEecCCcEEEEEeccceeeeccCC------------------------------------------
Confidence 54 999999999999999999999887752
Q ss_pred CCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEe
Q 000470 1345 NEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWD 1378 (1472)
Q Consensus 1345 ~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWD 1378 (1472)
|..-|+++.++.+. +++||+-|.++++|.
T Consensus 375 -----h~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 375 -----HEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred -----CcceeEEEecCCCCceEEeccccceeeeee
Confidence 22257888887665 788999999999996
No 387
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.92 E-value=1.9e-25 Score=269.29 Aligned_cols=195 Identities=25% Similarity=0.313 Sum_probs=156.3
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC--C--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP--P--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~--~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
.||||++||+.-.++...||..|.|..+|.|++... . .....+.+.+..|++.||++||+.+||||||||.||||+
T Consensus 561 ~H~NviRyyc~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~ 640 (903)
T KOG1027|consen 561 EHPNVIRYYCSEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILIS 640 (903)
T ss_pred CCCceEEEEeeccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEE
Confidence 599999999999999999999999999999999873 1 123356788899999999999999999999999999998
Q ss_pred c---C--CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHH
Q 000470 78 S---W--NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 152 (1472)
Q Consensus 78 ~---~--~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~e 152 (1472)
. + ..++|+|||++|.... +...+.. ..+..||-+|+|||++... .-+.++|||||||++|+
T Consensus 641 ~~~~~~~~ra~iSDfglsKkl~~---~~sS~~r-~s~~sGt~GW~APE~L~~~----------~~~~avDiFslGCvfyY 706 (903)
T KOG1027|consen 641 VPSADGTLRAKISDFGLSKKLAG---GKSSFSR-LSGGSGTSGWQAPEQLRED----------RKTQAVDIFSLGCVFYY 706 (903)
T ss_pred ccCCCcceeEEecccccccccCC---Ccchhhc-ccCCCCcccccCHHHHhcc----------ccCcccchhhcCceEEE
Confidence 6 3 3699999999997732 2333443 4566789999999988633 23458999999999999
Q ss_pred HHhC-CCCCCchHH--HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 153 LFLE-VPFFELSHL--LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 153 Lltg-~~pf~~~~~--~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.++| .+||...-. ..+..+.+... .+....+.++++||.+||..||..||+|.++|.|
T Consensus 707 vltgG~HpFGd~~~R~~NIl~~~~~L~-~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 707 VLTGGSHPFGDSLERQANILTGNYTLV-HLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred EecCCccCCCchHHhhhhhhcCcccee-eeccCchHHHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 9998 999975432 23444554422 2333333389999999999999999999999999
No 388
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.92 E-value=1.1e-24 Score=250.57 Aligned_cols=193 Identities=23% Similarity=0.300 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++.++...|+|+||++ ++|.+++.. ...+++.+++.++.|++.||.|||++|++|+||||+||+
T Consensus 59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nil 138 (260)
T cd08222 59 LDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIF 138 (260)
T ss_pred CCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheE
Confidence 579999999999999999999999999 599888753 456899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++. +.++|+|||.++....... ......+++.|+|||.+. ...++.++|+||+|+++|+|++
T Consensus 139 i~~-~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~slG~~~~~l~~ 200 (260)
T cd08222 139 LKN-NLLKIGDFGVSRLLMGSCD-------LATTFTGTPYYMSPEALK----------HQGYDSKSDIWSLGCILYEMCC 200 (260)
T ss_pred eec-CCEeecccCceeecCCCcc-------cccCCCCCcCccCHHHHc----------cCCCCchhhHHHHHHHHHHHHh
Confidence 975 6799999998876532211 122345678899999764 2346778999999999999999
Q ss_pred CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|..||............ ....+.++...+..+.++|.+||..||++||++.|+++|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 201 LAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 99888755443332221 122333455667889999999999999999999999998
No 389
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.91 E-value=1.5e-24 Score=254.12 Aligned_cols=193 Identities=19% Similarity=0.159 Sum_probs=154.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+|+||++ ++|.+++.+. .+++.++..++.|++.||.|||++|++||||||+||+++.+
T Consensus 73 l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~ 151 (293)
T cd06647 73 NKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD 151 (293)
T ss_pred cCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCC
Confidence 479999999999999999999999999 6999998764 47899999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+........ ......+++.|+|||.+. ...++.++|+||+||++|++++|.+|
T Consensus 152 ~~~kL~dfg~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~ll~~ll~g~~p 214 (293)
T cd06647 152 GSVKLTDFGFCAQITPEQS-------KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMVEGEPP 214 (293)
T ss_pred CCEEEccCcceeccccccc-------ccccccCChhhcCchhhc----------cCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999998764421110 112234678899999764 23568899999999999999999999
Q ss_pred CCchHHHHHHhcC---CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYRRGQ---YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~---~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...+........ ..+....+...+..++++|.+||..+|++||++++++.|
T Consensus 215 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 215 YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 9754432211111 111111223345689999999999999999999999988
No 390
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.91 E-value=2.8e-24 Score=250.15 Aligned_cols=198 Identities=19% Similarity=0.185 Sum_probs=153.5
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccC-CcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||+++++++.. +...|++|||++ ++|.+++...+ .+++..+..++.||+.||+|||++||+||||||+||++
T Consensus 63 l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~ 142 (284)
T cd05038 63 LDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV 142 (284)
T ss_pred CCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE
Confidence 579999999999887 568999999998 69999997654 68999999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++.++|+|||.+........ .........++..|+|||.+. ...++.++|||||||++|||++|
T Consensus 143 ~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~~~~~Pe~~~----------~~~~~~~~Di~slG~~l~el~tg 208 (284)
T cd05038 143 ESEDLVKISDFGLAKVLPEDKD----YYYVKEPGESPIFWYAPECLR----------TSKFSSASDVWSFGVTLYELFTY 208 (284)
T ss_pred cCCCCEEEcccccccccccCCc----ceeccCCCCCcccccCcHHHc----------cCCCCcccchHHHhhhhheeecc
Confidence 9999999999998876531111 111111223455699999764 23678899999999999999999
Q ss_pred CCCCCchHH------------------HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 157 VPFFELSHL------------------LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 157 ~~pf~~~~~------------------~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
..||..... ........ ....+...+..+.+++.+||+.+|++||++.|+++.+..
T Consensus 209 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05038 209 GDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGE--RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR 282 (284)
T ss_pred CCCcccccchhccccccccccccHHHHHHHHHcCC--cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence 777643211 11111111 111233445789999999999999999999999998654
No 391
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.91 E-value=2.5e-24 Score=251.49 Aligned_cols=196 Identities=20% Similarity=0.247 Sum_probs=154.3
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||+++++.++.+...|+||||+. |+|.+++..+..+++.+++.++.|++.||.|||+.|++||||||+||+++.++
T Consensus 63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~ 142 (288)
T cd05583 63 RCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG 142 (288)
T ss_pred CCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence 59999999999999999999999999 69999998777799999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++........ ......++..|+|||.+... ....+.++||||+|+++|||++|..||
T Consensus 143 ~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~Dv~slG~il~el~tg~~p~ 208 (288)
T cd05583 143 HVVLTDFGLSKEFLAEEEE------RAYSFCGTIEYMAPEVIRGG--------SGGHDKAVDWWSLGVLTFELLTGASPF 208 (288)
T ss_pred CEEEEECcccccccccccc------ccccccCCccccCHHHhcCC--------CCCCcchhhhHHHHHHHHHHHhCCCCc
Confidence 9999999987654322110 01123467889999976421 123578899999999999999999888
Q ss_pred Cch----HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH---HHHHHH
Q 000470 161 ELS----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA---ESYLQN 211 (1472)
Q Consensus 161 ~~~----~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa---~elL~~ 211 (1472)
... ....+.+.........+...+..++++|.+||+.||++|||+ .++|+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 209 TVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ccCcccchHHHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 532 122222222222223445567889999999999999999985 555665
No 392
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.91 E-value=3.8e-24 Score=250.01 Aligned_cols=192 Identities=20% Similarity=0.166 Sum_probs=150.2
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeN 73 (1472)
++||||+++++++... ...|+||||++ ++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||+|+|
T Consensus 56 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~n 135 (287)
T cd06621 56 CKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSN 135 (287)
T ss_pred CCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence 5899999999988553 47899999999 599887642 3458999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHH
Q 000470 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 74 ILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 153 (1472)
|+++.++.++|+|||++........ ....++..|+|||.+. +..++.++|||||||++|+|
T Consensus 136 il~~~~~~~~l~dfg~~~~~~~~~~---------~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~~l 196 (287)
T cd06621 136 ILLTRKGQVKLCDFGVSGELVNSLA---------GTFTGTSFYMAPERIQ----------GKPYSITSDVWSLGLTLLEV 196 (287)
T ss_pred EEEecCCeEEEeecccccccccccc---------ccccCCccccCHHHhc----------CCCCCchhhHHHHHHHHHHH
Confidence 9999999999999998765432111 1234577899999764 34678899999999999999
Q ss_pred HhCCCCCCch--------HHHHHHhcCCCCC--cccC--CCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 154 FLEVPFFELS--------HLLAYRRGQYDPS--QHLE--KIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 154 ltg~~pf~~~--------~~~~~~~~~~~~~--~~l~--~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
++|..||... +...+......+. .... ...++.++++|.+||..||.+|||+.|+++|
T Consensus 197 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 197 AQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred HhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 9999888644 1222222211111 0011 1234679999999999999999999999998
No 393
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=2.7e-24 Score=255.57 Aligned_cols=196 Identities=22% Similarity=0.236 Sum_probs=153.1
Q ss_pred CCCCCcceeeEEEEeCC-eEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCCCC
Q 000470 1 MSSTPCVHKKFWQETDK-AAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKG---ICHGDIKCEN 73 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~-~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~g---IvH~DLKpeN 73 (1472)
+.|||+|++++|+.+++ ..+||+|||+ |+|.++|..+. .|+|.....|+.++++||+|||... |+||||||+|
T Consensus 128 l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssN 207 (361)
T KOG1187|consen 128 LRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSN 207 (361)
T ss_pred CCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHH
Confidence 57999999999999888 5999999999 89999998765 7999999999999999999999854 9999999999
Q ss_pred EEEccCCcEEEEeccccccccCCCCCCCCCceeeccC-CCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHH
Q 000470 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG-GKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 152 (1472)
Q Consensus 74 ILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~-~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~e 152 (1472)
||+|++..+||+|||+++... .. ... ..+. .||..|+|||.+. .+.++.++||||||+++.|
T Consensus 208 ILLD~~~~aKlsDFGLa~~~~--~~---~~~--~~~~~~gt~gY~~PEy~~----------~g~lt~KsDVySFGVvllE 270 (361)
T KOG1187|consen 208 ILLDEDFNAKLSDFGLAKLGP--EG---DTS--VSTTVMGTFGYLAPEYAS----------TGKLTEKSDVYSFGVVLLE 270 (361)
T ss_pred eeECCCCCEEccCccCcccCC--cc---ccc--eeeecCCCCccCChhhhc----------cCCcCcccccccchHHHHH
Confidence 999999999999999996431 10 111 1122 7899999999664 3578999999999999999
Q ss_pred HHhCCCCCCchH------HHHH-----HhcCCC--CCcccC-CCCC-----HHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 153 LFLEVPFFELSH------LLAY-----RRGQYD--PSQHLE-KIPD-----SGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 153 Lltg~~pf~~~~------~~~~-----~~~~~~--~~~~l~-~~~~-----~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|++|+++.+... +..+ ..+... ..+.+. ...+ ..+..+..+|++.+|.+||++.|+++.++
T Consensus 271 litgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~ 350 (361)
T KOG1187|consen 271 LITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELE 350 (361)
T ss_pred HHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHH
Confidence 999987776321 2222 111111 122222 1111 23567788999999999999999988864
No 394
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.91 E-value=4.3e-24 Score=245.64 Aligned_cols=195 Identities=13% Similarity=0.087 Sum_probs=151.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++|+||+++++++.. ...|++|||++ ++|.+++... ..+++.++..++.||+.||.|||+.|++||||||+||+++
T Consensus 58 l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~ 136 (260)
T cd05073 58 LQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS 136 (260)
T ss_pred cCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc
Confidence 579999999999887 77899999998 6999999763 3578889999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
..+.++|+|||.+........ . ......++..|+|||.+. ...++.++|+|||||++|++++ |
T Consensus 137 ~~~~~~l~d~~~~~~~~~~~~-----~-~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~~l~t~g 200 (260)
T cd05073 137 ASLVCKIADFGLARVIEDNEY-----T-AREGAKFPIKWTAPEAIN----------FGSFTIKSDVWSFGILLMEIVTYG 200 (260)
T ss_pred CCCcEEECCCcceeeccCCCc-----c-cccCCcccccccCHhHhc----------cCCcCccccchHHHHHHHHHHhcC
Confidence 999999999998865421110 0 011122345699999764 2357889999999999999998 8
Q ss_pred CCCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
.+||.......... .........+...+..+.+++.+||+.+|++||++.++++-+
T Consensus 201 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L 257 (260)
T cd05073 201 RIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 257 (260)
T ss_pred CCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 98986543222111 111111123345567899999999999999999999998764
No 395
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.91 E-value=1.6e-24 Score=259.72 Aligned_cols=197 Identities=20% Similarity=0.302 Sum_probs=149.1
Q ss_pred CCCCCcceeeEEEEeC--------------CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 000470 1 MSSTPCVHKKFWQETD--------------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICH 66 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--------------~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH 66 (1472)
++||||+++++++... ...|+||||++++|.+++... .+++..++.++.||+.||+|||++||+|
T Consensus 59 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givH 137 (342)
T cd07854 59 LDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQG-PLSEEHARLFMYQLLRGLKYIHSANVLH 137 (342)
T ss_pred cCCCcchhhHhhhcccccccccccccccccceEEEEeecccccHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 5799999999877654 358999999999999988754 5899999999999999999999999999
Q ss_pred cCCCCCCEEEccC-CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHH
Q 000470 67 GDIKCENVLVTSW-NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFA 145 (1472)
Q Consensus 67 ~DLKpeNILv~~~-~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwS 145 (1472)
|||||+||+++.. +.++|+|||.++........ ........++..|+|||.+.. ...++.++||||
T Consensus 138 ~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwS 204 (342)
T cd07854 138 RDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH----KGYLSEGLVTKWYRSPRLLLS---------PNNYTKAIDMWA 204 (342)
T ss_pred CCCCHHHEEEcCCCceEEECCcccceecCCcccc----ccccccccccccccCHHHHhC---------ccccCchhhHHH
Confidence 9999999999854 57899999988754221111 111122346788999997642 235678999999
Q ss_pred HHHHHHHHHhCCCCCCchHH-HH---HHhc-----------------------CCCC---CcccCCCCCHHHHHHHHHhc
Q 000470 146 VGCVIAELFLEVPFFELSHL-LA---YRRG-----------------------QYDP---SQHLEKIPDSGIRKMILHMI 195 (1472)
Q Consensus 146 lG~il~eLltg~~pf~~~~~-~~---~~~~-----------------------~~~~---~~~l~~~~~~~l~~LI~~mL 195 (1472)
|||++|+|++|.+||..... .. .... .... ...+....+.++++||.+||
T Consensus 205 lGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 284 (342)
T cd07854 205 AGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQIL 284 (342)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHh
Confidence 99999999999988853221 11 0000 0000 00112235678999999999
Q ss_pred ccCcCCCCCHHHHHHH
Q 000470 196 QLEPELRFSAESYLQN 211 (1472)
Q Consensus 196 ~~dP~~Rpsa~elL~~ 211 (1472)
+.||++||+++|+++|
T Consensus 285 ~~dP~~R~t~~ell~h 300 (342)
T cd07854 285 TFNPMDRLTAEEALMH 300 (342)
T ss_pred CCCchhccCHHHHhCC
Confidence 9999999999999998
No 396
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.91 E-value=1.7e-24 Score=251.99 Aligned_cols=192 Identities=22% Similarity=0.288 Sum_probs=153.1
Q ss_pred CCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
||||++++++++.+...|+||||+.|+|++++.... .+++.++..++.|++.||.|||++|++|+||||+||+++..+
T Consensus 57 h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~ 136 (283)
T cd07830 57 HPNIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE 136 (283)
T ss_pred CCCchhHHHHhhcCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC
Confidence 999999999999999999999999999999997754 689999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||.++....... .....++..|+|||.+.. ...++.++|+||+|++++||++|++||
T Consensus 137 ~~~l~d~~~~~~~~~~~~--------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~s~G~~l~el~~g~~~~ 199 (283)
T cd07830 137 VVKIADFGLAREIRSRPP--------YTDYVSTRWYRAPEILLR---------STSYSSPVDIWALGCIMAELYTLRPLF 199 (283)
T ss_pred CEEEeecccceeccCCCC--------cCCCCCcccccCceeeec---------CcCcCCccchhhHHHHHHHHHhCCCcc
Confidence 999999998875422111 122346778999998742 234688999999999999999999999
Q ss_pred CchHHHH----HHhcCC-------------------C----C---CcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHH
Q 000470 161 ELSHLLA----YRRGQY-------------------D----P---SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210 (1472)
Q Consensus 161 ~~~~~~~----~~~~~~-------------------~----~---~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~ 210 (1472)
....... ...... . . ........+..++++|.+||+.||++||+++|++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 200 PGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred CCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 6432211 110000 0 0 00011122568999999999999999999999998
Q ss_pred H
Q 000470 211 N 211 (1472)
Q Consensus 211 ~ 211 (1472)
|
T Consensus 280 ~ 280 (283)
T cd07830 280 H 280 (283)
T ss_pred C
Confidence 8
No 397
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.91 E-value=1.6e-24 Score=251.97 Aligned_cols=195 Identities=24% Similarity=0.308 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+|+||++++|.+++..+ ..+++.++..++.||+.||.|||++||+||||||+||+++.+
T Consensus 55 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~ 134 (283)
T cd05118 55 LNHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTE 134 (283)
T ss_pred hcCCCcchHHHhhccCCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCC
Confidence 4799999999999999999999999999999998774 568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+.....+. . ......++..|+|||.+.. ...++.++|+||+||++|+|++|++|
T Consensus 135 ~~~~l~df~~~~~~~~~~---~----~~~~~~~~~~~~~PE~~~~---------~~~~~~~~Di~slG~~l~~l~tg~~~ 198 (283)
T cd05118 135 GVLKLADFGLARSFGSPV---R----PYTHYVVTRWYRAPELLLG---------DKGYSTPVDIWSVGCIFAELLSRRPL 198 (283)
T ss_pred CcEEEeeeeeeEecCCCc---c----cccCccCcccccCcHHHhc---------CCCCCchhHHHHHHHHHHHHHhCCCC
Confidence 999999999887553221 0 1112335678999997642 22578899999999999999999999
Q ss_pred CCchHHHH----HHhcCCC--------------------------CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 160 FELSHLLA----YRRGQYD--------------------------PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 160 f~~~~~~~----~~~~~~~--------------------------~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
|...+... ....... .........+..++++|.+||+.||.+||++++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll 278 (283)
T cd05118 199 FPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQAL 278 (283)
T ss_pred CCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHh
Confidence 96433211 1000000 00011123467899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
.|
T Consensus 279 ~~ 280 (283)
T cd05118 279 AH 280 (283)
T ss_pred hC
Confidence 88
No 398
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.91 E-value=3.7e-24 Score=256.75 Aligned_cols=196 Identities=15% Similarity=0.187 Sum_probs=150.6
Q ss_pred CCCCcceeeEEEEe-CCeEEEEecccC-CcHHHHHhCC------------------------------------------
Q 000470 2 SSTPCVHKKFWQET-DKAAYLLRQYFF-NSLRDRLSTP------------------------------------------ 37 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~-~~~~~lV~Ey~~-gsL~d~l~~~------------------------------------------ 37 (1472)
.||||+++++++.. +...|++|||++ |+|.+++..+
T Consensus 69 ~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (343)
T cd05103 69 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSA 148 (343)
T ss_pred CCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccc
Confidence 58999999998765 457899999999 6999998642
Q ss_pred -------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEEecccccc
Q 000470 38 -------------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKP 92 (1472)
Q Consensus 38 -------------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~ 92 (1472)
..++......++.||+.||+|||++||+||||||+|||++.++.++|+|||+++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~ 228 (343)
T cd05103 149 SSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARD 228 (343)
T ss_pred cccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccc
Confidence 1367778889999999999999999999999999999999999999999998875
Q ss_pred ccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCchH----HHH
Q 000470 93 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----LLA 167 (1472)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~----~~~ 167 (1472)
...... .....+..++..|+|||.+. ...++.++|||||||++|+|++ |.+||.... ...
T Consensus 229 ~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~ 293 (343)
T cd05103 229 IYKDPD-----YVRKGDARLPLKWMAPETIF----------DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 293 (343)
T ss_pred cccCcc-----hhhcCCCCCCcceECcHHhc----------CCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHH
Confidence 421110 01112233456799999764 3357889999999999999997 788885432 111
Q ss_pred HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 168 YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
..... .....+...++.+.+++.+||+.||++||++.|+++++..
T Consensus 294 ~~~~~--~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~ 338 (343)
T cd05103 294 RLKEG--TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 338 (343)
T ss_pred HHhcc--CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11111 1122334456789999999999999999999999999653
No 399
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.91 E-value=2.8e-24 Score=252.88 Aligned_cols=196 Identities=27% Similarity=0.401 Sum_probs=152.3
Q ss_pred CCCCCcceeeEEEEeCC----------eEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 000470 1 MSSTPCVHKKFWQETDK----------AAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~----------~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DL 69 (1472)
++||||+++++++.++. ..|+|+||++++|.+.+... ..+++.+++.++.||+.||.|||+.||+||||
T Consensus 63 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl 142 (302)
T cd07864 63 LNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDI 142 (302)
T ss_pred CCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 57999999999987655 89999999999998888764 45899999999999999999999999999999
Q ss_pred CCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
||+||++++++.+||+|||.+.........+ .....++..|+|||.+.. ...++.++||||+||+
T Consensus 143 ~p~nili~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~---------~~~~~~~~Di~slG~~ 207 (302)
T cd07864 143 KCSNILLNNKGQIKLADFGLARLYNSEESRP------YTNKVITLWYRPPELLLG---------EERYGPAIDVWSCGCI 207 (302)
T ss_pred CHHHEEECCCCcEEeCcccccccccCCcccc------cccceeccCccChHHhcC---------CCCCCchhHHHHHHHH
Confidence 9999999999999999999887543221111 112234667999997642 2246789999999999
Q ss_pred HHHHHhCCCCCCchHHHH----HHhc--CCCCC------------------------cccCCCCCHHHHHHHHHhcccCc
Q 000470 150 IAELFLEVPFFELSHLLA----YRRG--QYDPS------------------------QHLEKIPDSGIRKMILHMIQLEP 199 (1472)
Q Consensus 150 l~eLltg~~pf~~~~~~~----~~~~--~~~~~------------------------~~l~~~~~~~l~~LI~~mL~~dP 199 (1472)
+|||++|++||...+... +... ...+. .......+..+.++|.+||+.||
T Consensus 208 ~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 287 (302)
T cd07864 208 LGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDP 287 (302)
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCCh
Confidence 999999999996443211 1111 00000 00112346789999999999999
Q ss_pred CCCCCHHHHHHH
Q 000470 200 ELRFSAESYLQN 211 (1472)
Q Consensus 200 ~~Rpsa~elL~~ 211 (1472)
++||+++++++|
T Consensus 288 ~~Rp~~~~il~~ 299 (302)
T cd07864 288 SKRCTAEEALNS 299 (302)
T ss_pred hhCCCHHHHhcC
Confidence 999999999987
No 400
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=3.2e-23 Score=239.37 Aligned_cols=249 Identities=16% Similarity=0.288 Sum_probs=209.8
Q ss_pred eeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEE
Q 000470 1052 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1131 (1472)
Q Consensus 1052 ~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~ 1131 (1472)
..+..|.+.|-++.|+|.-..++++=..|.|.||+.++.. -...++....+|.+..|...-+++++|++|+.|+
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqt------mVksfeV~~~PvRa~kfiaRknWiv~GsDD~~Ir 80 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQT------MVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIR 80 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccce------eeeeeeecccchhhheeeeccceEEEecCCceEE
Confidence 4566689999999999999999999999999999998754 2234555567899999999999999999999999
Q ss_pred EEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCC-CccceeecCCCcc
Q 000470 1132 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN-SNTWTLKAIPEEG 1210 (1472)
Q Consensus 1132 vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~-~~~~~l~~~~h~g 1210 (1472)
||+..+.. .+. ....|.+-+.+++.+|. .+++++++.|-.|++||-..+ .+.+++++ |..
T Consensus 81 Vfnynt~e-------------kV~-~FeAH~DyIR~iavHPt---~P~vLtsSDDm~iKlW~we~~wa~~qtfeG--H~H 141 (794)
T KOG0276|consen 81 VFNYNTGE-------------KVK-TFEAHSDYIRSIAVHPT---LPYVLTSSDDMTIKLWDWENEWACEQTFEG--HEH 141 (794)
T ss_pred EEecccce-------------eeE-EeeccccceeeeeecCC---CCeEEecCCccEEEEeeccCceeeeeEEcC--cce
Confidence 99987421 122 23357778899999998 779999999999999998764 56778877 888
Q ss_pred ceEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEE
Q 000470 1211 YVSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1289 (1472)
Q Consensus 1211 ~Itsl~~sp-~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VW 1289 (1472)
.|.+++|.| |.+.+++|+-|++|++|.+....+..++. +|..+|++++++ +.+ +.|++++|+.|..|+||
T Consensus 142 yVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~-gHekGVN~Vdyy-~~g-------dkpylIsgaDD~tiKvW 212 (794)
T KOG0276|consen 142 YVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLE-GHEKGVNCVDYY-TGG-------DKPYLISGADDLTIKVW 212 (794)
T ss_pred EEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeee-ccccCcceEEec-cCC-------CcceEEecCCCceEEEe
Confidence 999999999 67999999999999999999999988888 588899999994 333 36899999999999999
Q ss_pred EcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEc
Q 000470 1290 NAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTG 1368 (1472)
Q Consensus 1290 Dl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTg 1368 (1472)
|..+..|++++. +|...|.+++|+|.- .++||
T Consensus 213 DyQtk~CV~TLe-----------------------------------------------GHt~Nvs~v~fhp~lpiiisg 245 (794)
T KOG0276|consen 213 DYQTKSCVQTLE-----------------------------------------------GHTNNVSFVFFHPELPIIISG 245 (794)
T ss_pred ecchHHHHHHhh-----------------------------------------------cccccceEEEecCCCcEEEEe
Confidence 999999988875 334468899999876 77799
Q ss_pred cCCCeEEEEeCCC
Q 000470 1369 GTDLKIRRWDHCS 1381 (1472)
Q Consensus 1369 g~Dg~IrlWDl~~ 1381 (1472)
|+||+||+|+-.+
T Consensus 246 sEDGTvriWhs~T 258 (794)
T KOG0276|consen 246 SEDGTVRIWNSKT 258 (794)
T ss_pred cCCccEEEecCcc
Confidence 9999999998654
No 401
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.91 E-value=1.8e-24 Score=251.59 Aligned_cols=194 Identities=26% Similarity=0.349 Sum_probs=155.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++......|+|+||++++|.+++... ..+++.+++.++.|++.||+|||++||+||||+|+||+++.+
T Consensus 55 ~~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~ 134 (282)
T cd07829 55 LKHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRD 134 (282)
T ss_pred cCCCCHHHHHhhhhcCCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCC
Confidence 4799999999999999999999999999999999876 569999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++....... ......++..|+|||.+.. ...++.++||||+||++|||++|.+|
T Consensus 135 ~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~---------~~~~~~~~Dv~slG~~l~~l~~~~~~ 198 (282)
T cd07829 135 GVLKLADFGLARAFGIPLR-------TYTHEVVTLWYRAPEILLG---------SKHYSTAVDIWSVGCIFAEMITGKPL 198 (282)
T ss_pred CCEEEecCCcccccCCCcc-------ccCccccCcCcCChHHhcC---------CcCCCccccHHHHHHHHHHHHhCCCC
Confidence 9999999998875532211 1122334677999997742 22568899999999999999999999
Q ss_pred CCchHHHHH----Hh--------------------cCCCC-----C-cccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 160 FELSHLLAY----RR--------------------GQYDP-----S-QHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 160 f~~~~~~~~----~~--------------------~~~~~-----~-~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
|........ .. ..+.. . ..++. .+..+.++|.+||..||++||++++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~l~~~P~~Rp~~~~~l 277 (282)
T cd07829 199 FPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPR-LDPEGIDLLSKMLQYNPAKRISAKEAL 277 (282)
T ss_pred CCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhccc-ccHHHHHHHHHhhccCcccCCCHHHHh
Confidence 965432111 00 00000 0 01112 256899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 278 ~~ 279 (282)
T cd07829 278 KH 279 (282)
T ss_pred hC
Confidence 98
No 402
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.91 E-value=3.5e-24 Score=234.09 Aligned_cols=283 Identities=18% Similarity=0.295 Sum_probs=215.2
Q ss_pred eeeeccccccceeEEEEcCCC-CEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCC
Q 000470 1050 LVAHLQEHCSAVNEIAISHDH-SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1128 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~-~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG 1128 (1472)
.|+.|.||++.|.+++=+|.. ..++|||.||.|+|||+..-+ +..++.+|.+.|..+++.. ..++++|.|.
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~------~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDK 129 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRE------CIRTFKAHEGLVRGICVTQ--TSFFTVGDDK 129 (433)
T ss_pred chhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhh------hhheeecccCceeeEEecc--cceEEecCCc
Confidence 788999999999999999976 689999999999999998765 5667888999999999876 7789999999
Q ss_pred cEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCC
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1208 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h 1208 (1472)
+|+.|.++. . ..+.+.. ...+..+.-+.. ...+++++. .|.+||.....++..+.- .
T Consensus 130 tvK~wk~~~------~--------p~~tilg--~s~~~gIdh~~~---~~~FaTcGe--~i~IWD~~R~~Pv~smsw--G 186 (433)
T KOG0268|consen 130 TVKQWKIDG------P--------PLHTILG--KSVYLGIDHHRK---NSVFATCGE--QIDIWDEQRDNPVSSMSW--G 186 (433)
T ss_pred ceeeeeccC------C--------cceeeec--cccccccccccc---cccccccCc--eeeecccccCCccceeec--C
Confidence 999999872 1 1111111 112222222221 235555544 699999998888888875 5
Q ss_pred ccceEEEEEcCCC-CEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEE
Q 000470 1209 EGYVSSLVTGPCG-NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1287 (1472)
Q Consensus 1209 ~g~Itsl~~sp~g-~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~ 1287 (1472)
.+.|.|+.|+|-. ..|++|.+|+.|.|||+|...+++..... -..+.|+| .|... .+++|..|..+.
T Consensus 187 ~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~--mRTN~Isw-nPeaf---------nF~~a~ED~nlY 254 (433)
T KOG0268|consen 187 ADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILT--MRTNTICW-NPEAF---------NFVAANEDHNLY 254 (433)
T ss_pred CCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeee--ccccceec-Ccccc---------ceeeccccccce
Confidence 6789999999954 67788889999999999999999887653 35678888 88432 467777888999
Q ss_pred EEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEE
Q 000470 1288 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL 1366 (1472)
Q Consensus 1288 VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~ll 1366 (1472)
.+|++..+.. +....+|...|.++.|+|.| .++
T Consensus 255 ~~DmR~l~~p----------------------------------------------~~v~~dhvsAV~dVdfsptG~Efv 288 (433)
T KOG0268|consen 255 TYDMRNLSRP----------------------------------------------LNVHKDHVSAVMDVDFSPTGQEFV 288 (433)
T ss_pred ehhhhhhccc----------------------------------------------chhhcccceeEEEeccCCCcchhc
Confidence 9998864321 11124677789999999999 799
Q ss_pred EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccce
Q 000470 1367 TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSI 1446 (1472)
Q Consensus 1367 Tgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I 1446 (1472)
|||-|++||+|....+.. ++.|.++ --..|
T Consensus 289 sgsyDksIRIf~~~~~~S--------------RdiYhtk------------------------------------RMq~V 318 (433)
T KOG0268|consen 289 SGSYDKSIRIFPVNHGHS--------------RDIYHTK------------------------------------RMQHV 318 (433)
T ss_pred cccccceEEEeecCCCcc--------------hhhhhHh------------------------------------hhhee
Confidence 999999999999865432 2222110 12357
Q ss_pred eEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1447 LSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1447 ~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.+|. |+.|.++|+|||+||.|++||
T Consensus 319 ~~Vk-~S~Dskyi~SGSdd~nvRlWk 343 (433)
T KOG0268|consen 319 FCVK-YSMDSKYIISGSDDGNVRLWK 343 (433)
T ss_pred eEEE-EeccccEEEecCCCcceeeee
Confidence 8885 999999999999999999997
No 403
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.91 E-value=3e-24 Score=257.43 Aligned_cols=190 Identities=22% Similarity=0.279 Sum_probs=148.2
Q ss_pred CCCCCcceeeEEEEeCC------eEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETDK------AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~------~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++.... .+|+|+||+.++|.+++. ..+++.++.+++.|++.||+|||++||+||||||+||
T Consensus 71 l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NI 148 (342)
T cd07879 71 MQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNL 148 (342)
T ss_pred cCCCCccchhheecccccCCCCceEEEEecccccCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHE
Confidence 57999999999987653 469999999988888764 3489999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
+++.++.++|+|||+++..... . ....++..|+|||.+.. ...++.++|||||||++|||+
T Consensus 149 ll~~~~~~kL~dfg~~~~~~~~------~----~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slGvil~el~ 209 (342)
T cd07879 149 AVNEDCELKILDFGLARHADAE------M----TGYVVTRWYRAPEVILN---------WMHYNQTVDIWSVGCIMAEML 209 (342)
T ss_pred EECCCCCEEEeeCCCCcCCCCC------C----CCceeeecccChhhhcC---------ccccCchHHHHHHHHHHHHHH
Confidence 9999999999999998754211 0 12235678999997642 235788999999999999999
Q ss_pred hCCCCCCchHHHH----HHhcC------------------------CCCCcc---cCCCCCHHHHHHHHHhcccCcCCCC
Q 000470 155 LEVPFFELSHLLA----YRRGQ------------------------YDPSQH---LEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 155 tg~~pf~~~~~~~----~~~~~------------------------~~~~~~---l~~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
+|+.||....... +.... ..+... .....++.+.+||.+||+.||++||
T Consensus 210 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~ 289 (342)
T cd07879 210 TGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRL 289 (342)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCc
Confidence 9999996543211 11000 000000 1123456789999999999999999
Q ss_pred CHHHHHHH
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~elL~~ 211 (1472)
+++|++.|
T Consensus 290 ~~~e~l~h 297 (342)
T cd07879 290 TATEALEH 297 (342)
T ss_pred CHHHHhcC
Confidence 99999988
No 404
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=1.6e-24 Score=241.88 Aligned_cols=205 Identities=17% Similarity=0.159 Sum_probs=164.8
Q ss_pred CCCCCcceeeEEEEeC-CeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETD-KAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK--GICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~-~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~--gIvH~DLKpeNILv 76 (1472)
|.||-||++|++|.-+ ..+|-|+|||+| +|.-||+....+++.|++.|+.||+.||.||.+. -|||-||||.|||+
T Consensus 524 LDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILL 603 (775)
T KOG1151|consen 524 LDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILL 603 (775)
T ss_pred cCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEE
Confidence 6899999999999665 578999999997 8888999988899999999999999999999986 59999999999999
Q ss_pred cc---CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHH
Q 000470 77 TS---WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 77 ~~---~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 153 (1472)
.+ .|.+||+|||+++.......+..+-........||-+|++||.|.-.. ....++.++||||+|+|+|..
T Consensus 604 v~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgk------ePPKIsnKVDVWSvGVIFyQC 677 (775)
T KOG1151|consen 604 VNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGK------EPPKISNKVDVWSVGVIFYQC 677 (775)
T ss_pred ecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCC------CCCccccceeeEeeehhhhhh
Confidence 54 478999999999988655555444444556677999999999986321 134688999999999999999
Q ss_pred HhCCCCCCchHHH----HHHhcCCCCCcc--cCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 154 FLEVPFFELSHLL----AYRRGQYDPSQH--LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 154 ltg~~pf~~~~~~----~~~~~~~~~~~~--l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+.|+.||...+.. .+.......... ..+..+.++++||++||++.-++|..+.++..+
T Consensus 678 lYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 678 LYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred hccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 9999999654321 111111111112 223567889999999999999999999999887
No 405
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.91 E-value=4.2e-24 Score=246.28 Aligned_cols=196 Identities=20% Similarity=0.211 Sum_probs=156.5
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.+. ..+|+++||++ ++|.+++...+.+++..++.++.||+.||.|||++||+|+||||+||+++
T Consensus 61 l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~ 140 (264)
T cd06653 61 LRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD 140 (264)
T ss_pred cCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc
Confidence 5899999999998764 46899999998 59999998877789999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.++........... .....++..|+|||.+. +..++.++|+|||||++|+|++|+
T Consensus 141 ~~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~~l~~g~ 206 (264)
T cd06653 141 SAGNVKLGDFGASKRIQTICMSGTG----IKSVTGTPYWMSPEVIS----------GEGYGRKADVWSVACTVVEMLTEK 206 (264)
T ss_pred CCCCEEECccccccccccccccCcc----ccccCCcccccCHhhhc----------CCCCCccccHHHHHHHHHHHHhCC
Confidence 9999999999998754321111111 12234678899999764 234678899999999999999999
Q ss_pred CCCCchH-HHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSH-LLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~-~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||.... .....+.. ....+.++...++.+.++|.+||+ +|.+||++.+++.|
T Consensus 207 ~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 207 PPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred CCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 9996443 22222222 222344566677889999999999 57999999999988
No 406
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.91 E-value=1.7e-22 Score=238.22 Aligned_cols=287 Identities=17% Similarity=0.281 Sum_probs=231.7
Q ss_pred eeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCC-CcE
Q 000470 1052 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD-GII 1130 (1472)
Q Consensus 1052 ~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~D-G~I 1130 (1472)
..|.+....|++.+|++....+|+|=..|...++++.... ..........+|..++|+..|+++|.|+.. |.+
T Consensus 259 ~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~------lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQL 332 (893)
T KOG0291|consen 259 HYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFN------LIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQL 332 (893)
T ss_pred eeecccccceeeeeccCCceEEEEEecCCeeEEEecCCce------EEEEeecccceeeEEEecccCCEEEEcCCccceE
Confidence 4455555889999999999999999999999999998754 222333344679999999999999997754 899
Q ss_pred EEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCcc
Q 000470 1131 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1210 (1472)
Q Consensus 1131 ~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g 1210 (1472)
-||++..... ..-...|-..+.+++++|| |+.+++|+.||.|++||.+++-|..++.. |..
T Consensus 333 lVweWqsEsY--------------VlKQQgH~~~i~~l~YSpD---gq~iaTG~eDgKVKvWn~~SgfC~vTFte--Hts 393 (893)
T KOG0291|consen 333 LVWEWQSESY--------------VLKQQGHSDRITSLAYSPD---GQLIATGAEDGKVKVWNTQSGFCFVTFTE--HTS 393 (893)
T ss_pred EEEEeeccce--------------eeeccccccceeeEEECCC---CcEEEeccCCCcEEEEeccCceEEEEecc--CCC
Confidence 9999974211 1112345667889999999 88999999999999999999999999987 899
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCC-eEEEE
Q 000470 1211 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN-EVSLW 1289 (1472)
Q Consensus 1211 ~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg-~V~VW 1289 (1472)
.|+.++|+..|+.+++.+-||+|+.||+......+++..|....-.++.. .|.+. .+++|+.|. +|.||
T Consensus 394 ~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~Qfscvav-D~sGe---------lV~AG~~d~F~IfvW 463 (893)
T KOG0291|consen 394 GVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAV-DPSGE---------LVCAGAQDSFEIFVW 463 (893)
T ss_pred ceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEE-cCCCC---------EEEeeccceEEEEEE
Confidence 99999999999999999999999999999999999999877655566666 55543 566666554 69999
Q ss_pred EcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEc
Q 000470 1290 NAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTG 1368 (1472)
Q Consensus 1290 Dl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTg 1368 (1472)
++++|+...++. +|.++|.+++|+|.| .|+||
T Consensus 464 S~qTGqllDiLs-----------------------------------------------GHEgPVs~l~f~~~~~~LaS~ 496 (893)
T KOG0291|consen 464 SVQTGQLLDILS-----------------------------------------------GHEGPVSGLSFSPDGSLLASG 496 (893)
T ss_pred EeecCeeeehhc-----------------------------------------------CCCCcceeeEEccccCeEEec
Confidence 999999887775 344579999999988 67799
Q ss_pred cCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeE
Q 000470 1369 GTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILS 1448 (1472)
Q Consensus 1369 g~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ 1448 (1472)
++|++||+||+-.... .+.. + .+..-+++
T Consensus 497 SWDkTVRiW~if~s~~--~vEt------------------------------------------------l-~i~sdvl~ 525 (893)
T KOG0291|consen 497 SWDKTVRIWDIFSSSG--TVET------------------------------------------------L-EIRSDVLA 525 (893)
T ss_pred cccceEEEEEeeccCc--eeee------------------------------------------------E-eeccceeE
Confidence 9999999999753211 0110 0 14556889
Q ss_pred EeeeecCCcEEEEEcCCceEEEcC
Q 000470 1449 LGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1449 va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
++ |.|+|+-|+.+.-||.|.+|+
T Consensus 526 vs-frPdG~elaVaTldgqItf~d 548 (893)
T KOG0291|consen 526 VS-FRPDGKELAVATLDGQITFFD 548 (893)
T ss_pred EE-EcCCCCeEEEEEecceEEEEE
Confidence 95 999999999999999999996
No 407
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.91 E-value=1.4e-24 Score=260.39 Aligned_cols=191 Identities=23% Similarity=0.257 Sum_probs=151.6
Q ss_pred CCCCCcceeeEEEEeCCe------EEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETDKA------AYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~------~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
+.||||+++++++..+.. .|+|+||+.++|.+++... .+++.++..++.||+.||+|||++||+||||||+||
T Consensus 71 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Ni 149 (343)
T cd07851 71 MDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQ-KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNI 149 (343)
T ss_pred ccCCCHHHHHHHhhccccccccccEEEEEecCCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHe
Confidence 479999999998876654 8999999999999998764 589999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
+++.++.++|+|||.+...... .....++..|+|||.+.. ...++.++||||+||++|||+
T Consensus 150 ll~~~~~~kL~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslGv~l~ell 210 (343)
T cd07851 150 AVNEDCELKILDFGLARHTDDE----------MTGYVATRWYRAPEIMLN---------WMHYNQTVDIWSVGCIMAELL 210 (343)
T ss_pred EECCCCCEEEcccccccccccc----------ccCCcccccccCHHHHhC---------CCCCCchHhHHHHHHHHHHHH
Confidence 9999999999999998754211 122345778999997642 225688999999999999999
Q ss_pred hCCCCCCchHHHH----HHhcCCCC------------------------C---cccCCCCCHHHHHHHHHhcccCcCCCC
Q 000470 155 LEVPFFELSHLLA----YRRGQYDP------------------------S---QHLEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 155 tg~~pf~~~~~~~----~~~~~~~~------------------------~---~~l~~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
+|++||....... +......+ . .......++.+.+||.+||+.||++||
T Consensus 211 tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rp 290 (343)
T cd07851 211 TGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRI 290 (343)
T ss_pred hCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCC
Confidence 9999986432211 11100000 0 011123467899999999999999999
Q ss_pred CHHHHHHH
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~elL~~ 211 (1472)
|+.|+++|
T Consensus 291 t~~ell~h 298 (343)
T cd07851 291 TAAEALAH 298 (343)
T ss_pred CHHHHhcC
Confidence 99999998
No 408
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.91 E-value=5.4e-24 Score=246.48 Aligned_cols=199 Identities=12% Similarity=0.045 Sum_probs=150.5
Q ss_pred CCCCCcceeeEEEEeCC------eEEEEecccC-CcHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 000470 1 MSSTPCVHKKFWQETDK------AAYLLRQYFF-NSLRDRLSTP------PFLSLVEKKWLAFQLLLAVKQCHEKGICHG 67 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~------~~~lV~Ey~~-gsL~d~l~~~------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~ 67 (1472)
++||||+++++++...+ ..++++||+. |+|.+++... ..++...++.++.|++.||+|||++||+||
T Consensus 58 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~ 137 (273)
T cd05074 58 FDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHR 137 (273)
T ss_pred CCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeec
Confidence 58999999999886532 3478999998 7998887421 147899999999999999999999999999
Q ss_pred CCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 68 DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
||||+||+++.++.++|+|||.++....... ........+++.|++||.+. ...++.++||||||
T Consensus 138 dikp~nili~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~----------~~~~~~~sDi~slG 202 (273)
T cd05074 138 DLAARNCMLNENMTVCVADFGLSKKIYSGDY-----YRQGCASKLPVKWLALESLA----------DNVYTTHSDVWAFG 202 (273)
T ss_pred ccchhhEEEcCCCCEEECcccccccccCCcc-----eecCCCccCchhhcCHhHHh----------cCccchhhhhHHHH
Confidence 9999999999999999999998875532110 00111233456799999764 33567899999999
Q ss_pred HHHHHHHh-CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 148 CVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 148 ~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
|++|||++ |.+||............ .......+...+..+.+++.+||+.+|++||++.|+++++..
T Consensus 203 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 203 VTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred HHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 99999999 78888654332221111 111111223445789999999999999999999999998653
No 409
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=6.2e-23 Score=217.27 Aligned_cols=254 Identities=18% Similarity=0.249 Sum_probs=195.8
Q ss_pred eeeecc-ccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCC
Q 000470 1050 LVAHLQ-EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1128 (1472)
Q Consensus 1050 lV~~l~-~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG 1128 (1472)
++.+|. +|+.+|.+++|+|.|++||+||.|+++.||.-..++ +....+..+|...|.|++|+++|++||+|+.|.
T Consensus 52 ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~e----fecv~~lEGHEnEVK~Vaws~sG~~LATCSRDK 127 (312)
T KOG0645|consen 52 CKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGE----FECVATLEGHENEVKCVAWSASGNYLATCSRDK 127 (312)
T ss_pred EEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCc----eeEEeeeeccccceeEEEEcCCCCEEEEeeCCC
Confidence 566665 599999999999999999999999999999866544 556778899999999999999999999999999
Q ss_pred cEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCC---CCccceeec
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRS---NSNTWTLKA 1205 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt---~~~~~~l~~ 1205 (1472)
+|.||.++. . ... .+......|-.-|..+.|+|. ..+|++++.|.+|++|+-.. ..+..++.+
T Consensus 128 SVWiWe~de-d---------dEf-ec~aVL~~HtqDVK~V~WHPt---~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g 193 (312)
T KOG0645|consen 128 SVWIWEIDE-D---------DEF-ECIAVLQEHTQDVKHVIWHPT---EDLLFSCSYDNTIKVYRDEDDDDWECVQTLDG 193 (312)
T ss_pred eEEEEEecC-C---------CcE-EEEeeeccccccccEEEEcCC---cceeEEeccCCeEEEEeecCCCCeeEEEEecC
Confidence 999999972 1 011 223334456666788889997 56999999999999998773 245666665
Q ss_pred CCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000470 1206 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1285 (1472)
Q Consensus 1206 ~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~ 1285 (1472)
|.+.|.+++|++.|..|++++.||++++|-++. .+..-+...+..+.++ ++ .|+++++|+.
T Consensus 194 --~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~-----~~~~~~sr~~Y~v~W~--~~----------~IaS~ggD~~ 254 (312)
T KOG0645|consen 194 --HENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYT-----DLSGMHSRALYDVPWD--NG----------VIASGGGDDA 254 (312)
T ss_pred --ccceEEEEEecCCCceEEEecCCcceEeeeecc-----CcchhcccceEeeeec--cc----------ceEeccCCCE
Confidence 888999999999999999999999999999873 3344455567777772 22 5899999999
Q ss_pred EEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCC--CC
Q 000470 1286 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP--GG 1363 (1472)
Q Consensus 1286 V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p--~g 1363 (1472)
|+++.-..+- ..+. +.+ ..+....|...|+++.|.| .+
T Consensus 255 i~lf~~s~~~-----------d~p~-----~~l------------------------~~~~~~aHe~dVNsV~w~p~~~~ 294 (312)
T KOG0645|consen 255 IRLFKESDSP-----------DEPS-----WNL------------------------LAKKEGAHEVDVNSVQWNPKVSN 294 (312)
T ss_pred EEEEEecCCC-----------CCch-----HHH------------------------HHhhhcccccccceEEEcCCCCC
Confidence 9998754210 0000 000 0001133555799999999 45
Q ss_pred cEEEccCCCeEEEEeCC
Q 000470 1364 DLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1364 ~llTgg~Dg~IrlWDl~ 1380 (1472)
.|++||.||.|++|.+.
T Consensus 295 ~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 295 RLASGGDDGIVNFWELE 311 (312)
T ss_pred ceeecCCCceEEEEEec
Confidence 89999999999999874
No 410
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.91 E-value=2e-25 Score=236.44 Aligned_cols=194 Identities=15% Similarity=0.064 Sum_probs=151.8
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCCcH---HHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEE
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFNSL---RDRLS--TPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVL 75 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL---~d~l~--~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNIL 75 (1472)
++||||+||+..-.++..|+.||+|+-+| |.++. .+..++|.-.-.|....+.||+||-. .+|+|||+||+|||
T Consensus 121 ~cp~IVkfyGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNIL 200 (361)
T KOG1006|consen 121 NCPNIVKFYGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNIL 200 (361)
T ss_pred CCcHHHHHhhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheE
Confidence 58999999999999999999999999655 44443 24568999999999999999999996 69999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++..|.+||||||++..... ++....-.|...|||||++... +..|+-++|+||||++|||+.|
T Consensus 201 ldr~G~vKLCDFGIcGqLv~--------SiAkT~daGCrpYmAPERi~p~--------~~gyDiRSDvWSLGITL~EvAt 264 (361)
T KOG1006|consen 201 LDRHGDVKLCDFGICGQLVD--------SIAKTVDAGCRPYMAPERIDPS--------DKGYDIRSDVWSLGITLYEVAT 264 (361)
T ss_pred EecCCCEeeecccchHhHHH--------HHHhhhccCCccccChhccCCc--------cCCcchhhhhhhhcceEeeeec
Confidence 99999999999998765421 1122233466779999998632 3368899999999999999999
Q ss_pred CCCCCCc--hHHHHHHhcCCCCCcc--cCC---CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFEL--SHLLAYRRGQYDPSQH--LEK---IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~--~~~~~~~~~~~~~~~~--l~~---~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|..||.. +.+..+........+. .+. ..+..++.+|.-||.+|-..||...+++++
T Consensus 265 G~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 265 GNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred CCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 9888853 2233333333322111 111 356789999999999999999999999976
No 411
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.91 E-value=5.1e-25 Score=245.54 Aligned_cols=186 Identities=22% Similarity=0.353 Sum_probs=143.7
Q ss_pred cceeeEEEEeCCeEEEEecccCCcHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC----
Q 000470 6 CVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW---- 79 (1472)
Q Consensus 6 Iv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~---- 79 (1472)
|+.+.++|+-.++.|||+|.++-+++|++..+.. ++...++.|++||++++++||+.+++|-||||||||+.+.
T Consensus 153 cv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~ 232 (415)
T KOG0671|consen 153 CVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFK 232 (415)
T ss_pred EEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEE
Confidence 6778889999999999999999999999998654 7889999999999999999999999999999999998532
Q ss_pred ----------------CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchH
Q 000470 80 ----------------NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 143 (1472)
Q Consensus 80 ----------------~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DI 143 (1472)
-.++|+|||.+...... -.+...|..|.|||+++ +-.++..+||
T Consensus 233 ~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~----------hs~iVsTRHYRAPEViL----------gLGwS~pCDv 292 (415)
T KOG0671|consen 233 TYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH----------HSTIVSTRHYRAPEVIL----------GLGWSQPCDV 292 (415)
T ss_pred EeccCCccceeccCCCcceEEEecCCcceeccC----------cceeeeccccCCchhee----------ccCcCCccCc
Confidence 24899999998743211 12334578899999987 4467889999
Q ss_pred HHHHHHHHHHHhCCCCCCchH----HHHHH---------------------hcCCCC---------------CcccC---
Q 000470 144 FAVGCVIAELFLEVPFFELSH----LLAYR---------------------RGQYDP---------------SQHLE--- 180 (1472)
Q Consensus 144 wSlG~il~eLltg~~pf~~~~----~~~~~---------------------~~~~~~---------------~~~l~--- 180 (1472)
||+||||+||++|..+|...+ +..+. ++..+. ...+.
T Consensus 293 WSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~ 372 (415)
T KOG0671|consen 293 WSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYM 372 (415)
T ss_pred eeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHh
Confidence 999999999999988884221 11110 011110 00000
Q ss_pred ---CCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 181 ---KIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 181 ---~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
......+.|||++||.+||.+|+|+.|+|.|
T Consensus 373 ~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 373 LQDDLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred ccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 0112367899999999999999999999988
No 412
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.91 E-value=4.5e-24 Score=254.31 Aligned_cols=191 Identities=20% Similarity=0.263 Sum_probs=150.4
Q ss_pred CCCCCcceeeEEEEe-CCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQET-DKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~-~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.. +...|+++||+.++|.+++...+ +++..+..++.||++||+|||++||+||||||.||+++..
T Consensus 66 l~hpniv~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~ 144 (328)
T cd07856 66 LRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSRP-LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINEN 144 (328)
T ss_pred cCCCCeeeEeeeEecCCCcEEEEeehhccCHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCC
Confidence 579999999999876 56889999999999999887644 7889999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+...... .....++..|+|||.+.. ...++.++||||+||++|+|++|++|
T Consensus 145 ~~~~l~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~el~tg~~~ 205 (328)
T cd07856 145 CDLKICDFGLARIQDPQ----------MTGYVSTRYYRAPEIMLT---------WQKYDVEVDIWSAGCIFAEMLEGKPL 205 (328)
T ss_pred CCEEeCccccccccCCC----------cCCCcccccccCceeeec---------cCCcCcHHHHHHHHHHHHHHHhCCCC
Confidence 99999999988643211 122345778999997642 23578899999999999999999999
Q ss_pred CCchHHHH---------------HH-------------hcC---CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 160 FELSHLLA---------------YR-------------RGQ---YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 160 f~~~~~~~---------------~~-------------~~~---~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
|....... .. ... ..+........++.++++|.+||+.+|++||+++++
T Consensus 206 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~el 285 (328)
T cd07856 206 FPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEA 285 (328)
T ss_pred CCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 96432110 00 000 000011112345789999999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
+.|
T Consensus 286 l~~ 288 (328)
T cd07856 286 LAH 288 (328)
T ss_pred hcC
Confidence 988
No 413
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.91 E-value=4.4e-22 Score=226.83 Aligned_cols=292 Identities=15% Similarity=0.202 Sum_probs=231.6
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCC--
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD-- 1127 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~D-- 1127 (1472)
.+-.+.||..+++-..+||.|.++|||...|+|||||+..-+.. -+.++..-.++|.++.|..+++.|++.++.
T Consensus 51 ~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hi----LKnef~v~aG~I~Di~Wd~ds~RI~avGEGre 126 (603)
T KOG0318|consen 51 SVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHI----LKNEFQVLAGPIKDISWDFDSKRIAAVGEGRE 126 (603)
T ss_pred ceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCccee----eeeeeeecccccccceeCCCCcEEEEEecCcc
Confidence 36778999999999999999999999999999999998764432 233455567889999999999999988753
Q ss_pred --CcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeec
Q 000470 1128 --GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1205 (1472)
Q Consensus 1128 --G~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~ 1205 (1472)
|.+.+||-.+. .|. ...|...+..++|-|..+- .+++|+.|++|.+|+=.--+-..++
T Consensus 127 rfg~~F~~DSG~S---vGe-------------i~GhSr~ins~~~KpsRPf--Ri~T~sdDn~v~ffeGPPFKFk~s~-- 186 (603)
T KOG0318|consen 127 RFGHVFLWDSGNS---VGE-------------ITGHSRRINSVDFKPSRPF--RIATGSDDNTVAFFEGPPFKFKSSF-- 186 (603)
T ss_pred ceeEEEEecCCCc---cce-------------eeccceeEeeeeccCCCce--EEEeccCCCeEEEeeCCCeeeeecc--
Confidence 44555655421 111 1245667889999998543 8999999999999974322222233
Q ss_pred CCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEe--ccccCCceeEEeecCCCCCccccCCCCEEEEEEcC
Q 000470 1206 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQ--YSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGC 1283 (1472)
Q Consensus 1206 ~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~--~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~d 1283 (1472)
..|...|+|+.|+|||..+++.++||.+.+||=.+++.+..+. .+|.+.|..+.| +|+.. .++++++|
T Consensus 187 r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsW-sPDs~---------~~~T~SaD 256 (603)
T KOG0318|consen 187 REHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSW-SPDST---------QFLTVSAD 256 (603)
T ss_pred cccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEE-CCCCc---------eEEEecCC
Confidence 3388899999999999999999999999999999999888776 357889999999 88776 89999999
Q ss_pred CeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC
Q 000470 1284 NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG 1363 (1472)
Q Consensus 1284 g~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g 1363 (1472)
.+++|||+.+.++.+.+....... + .-..+.| +++
T Consensus 257 kt~KIWdVs~~slv~t~~~~~~v~-------------------------------------------d-qqvG~lW-qkd 291 (603)
T KOG0318|consen 257 KTIKIWDVSTNSLVSTWPMGSTVE-------------------------------------------D-QQVGCLW-QKD 291 (603)
T ss_pred ceEEEEEeeccceEEEeecCCchh-------------------------------------------c-eEEEEEE-eCC
Confidence 999999999999988876322100 0 1224445 367
Q ss_pred cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCc
Q 000470 1364 DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHR 1443 (1472)
Q Consensus 1364 ~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 1443 (1472)
.|+|.+.+|.|.+++...++...++.| |.
T Consensus 292 ~lItVSl~G~in~ln~~d~~~~~~i~G---------------------------------------------------Hn 320 (603)
T KOG0318|consen 292 HLITVSLSGTINYLNPSDPSVLKVISG---------------------------------------------------HN 320 (603)
T ss_pred eEEEEEcCcEEEEecccCCChhheecc---------------------------------------------------cc
Confidence 899999999999999988876555554 99
Q ss_pred cceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1444 DSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1444 d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
..|++++ .++++.+|.|||.||.|.=|+
T Consensus 321 K~ITaLt-v~~d~~~i~SgsyDG~I~~W~ 348 (603)
T KOG0318|consen 321 KSITALT-VSPDGKTIYSGSYDGHINSWD 348 (603)
T ss_pred cceeEEE-EcCCCCEEEeeccCceEEEEe
Confidence 9999996 899999999999999999995
No 414
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.91 E-value=6.1e-24 Score=255.06 Aligned_cols=191 Identities=21% Similarity=0.215 Sum_probs=149.8
Q ss_pred CCCCCcceeeEEEEeC------CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~------~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++... ...|++++++.++|.+++..+ .+++..++.++.||+.||+|||++||+||||||+||
T Consensus 73 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NI 151 (345)
T cd07877 73 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 151 (345)
T ss_pred cCCCcccceeeeeeecccccccccEEEEehhcccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHE
Confidence 5899999999988653 357999999989999888765 489999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
+++.++.++|+|||+++..... .....++..|+|||.+.. ...++.++||||+||++|||+
T Consensus 152 ll~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslG~il~el~ 212 (345)
T cd07877 152 AVNEDCELKILDFGLARHTDDE----------MTGYVATRWYRAPEIMLN---------WMHYNQTVDIWSVGCIMAELL 212 (345)
T ss_pred EEcCCCCEEEeccccccccccc----------ccccccCCCccCHHHHhC---------ccCCCchhhHHHHHHHHHHHH
Confidence 9999999999999988754211 122346788999997642 235678999999999999999
Q ss_pred hCCCCCCchHH----HHHHhcC------------------------CCCCc---ccCCCCCHHHHHHHHHhcccCcCCCC
Q 000470 155 LEVPFFELSHL----LAYRRGQ------------------------YDPSQ---HLEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 155 tg~~pf~~~~~----~~~~~~~------------------------~~~~~---~l~~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
+|++||..... ..+.... ..+.. ......++.+++||.+||+.||.+||
T Consensus 213 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~ 292 (345)
T cd07877 213 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 292 (345)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcC
Confidence 99999853321 1111100 00000 01113467899999999999999999
Q ss_pred CHHHHHHH
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~elL~~ 211 (1472)
++.++++|
T Consensus 293 t~~e~l~h 300 (345)
T cd07877 293 TAAQALAH 300 (345)
T ss_pred CHHHHhcC
Confidence 99999998
No 415
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.91 E-value=5.1e-24 Score=255.50 Aligned_cols=191 Identities=23% Similarity=0.244 Sum_probs=150.6
Q ss_pred CCCCCcceeeEEEEeCC------eEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETDK------AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~------~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++..+. .+|+||||+.++|.+++... .+++..++.++.||+.||+|||++||+||||||+||
T Consensus 71 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Ni 149 (343)
T cd07880 71 MKHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHE-KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNL 149 (343)
T ss_pred cCCCCccceeeeecCCccccccceEEEEEecCCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 57999999999997654 46999999988999888754 589999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
+++.++.++|+|||.+...... .....+++.|+|||.+.. ...++.++|+||+||++|+|+
T Consensus 150 ll~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slG~ll~~l~ 210 (343)
T cd07880 150 AVNEDCELKILDFGLARQTDSE----------MTGYVVTRWYRAPEVILN---------WMHYTQTVDIWSVGCIMAEML 210 (343)
T ss_pred EEcCCCCEEEeecccccccccC----------ccccccCCcccCHHHHhC---------CCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999999988754211 112345778999998742 124688999999999999999
Q ss_pred hCCCCCCchHH----HHHHhcCCC-----------------------C----CcccCCCCCHHHHHHHHHhcccCcCCCC
Q 000470 155 LEVPFFELSHL----LAYRRGQYD-----------------------P----SQHLEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 155 tg~~pf~~~~~----~~~~~~~~~-----------------------~----~~~l~~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
+|.+||..... ..+...... . ...+....++.+.++|.+||+.||++||
T Consensus 211 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~ 290 (343)
T cd07880 211 TGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRI 290 (343)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCC
Confidence 99999964321 111110000 0 0011234566799999999999999999
Q ss_pred CHHHHHHH
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~elL~~ 211 (1472)
++.++++|
T Consensus 291 t~~~~l~~ 298 (343)
T cd07880 291 TAAEALAH 298 (343)
T ss_pred CHHHHhcC
Confidence 99999987
No 416
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.91 E-value=9.2e-23 Score=252.00 Aligned_cols=261 Identities=24% Similarity=0.396 Sum_probs=205.5
Q ss_pred Cccc-ccc--eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC
Q 000470 1043 GWRP-RGI--LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1043 ~W~p-~G~--lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~ 1119 (1472)
.|.. .+. +...+.+|...|++++|+||++++++|+.|+++||||+.... +...++.+|...|++++|+|.++
T Consensus 185 ~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~-----~~~~~l~gH~~~v~~~~f~p~g~ 259 (456)
T KOG0266|consen 185 IWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG-----RNLKTLKGHSTYVTSVAFSPDGN 259 (456)
T ss_pred EeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCC-----eEEEEecCCCCceEEEEecCCCC
Confidence 4654 344 778889999999999999999999999999999999994322 25567889999999999999999
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC-
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS- 1198 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~- 1198 (1472)
.+++|+.|++|+|||+++ + ...+ ....|...+..++|+++ ++.|++++.||.|++||+.++.
T Consensus 260 ~i~Sgs~D~tvriWd~~~-----~--------~~~~-~l~~hs~~is~~~f~~d---~~~l~s~s~d~~i~vwd~~~~~~ 322 (456)
T KOG0266|consen 260 LLVSGSDDGTVRIWDVRT-----G--------ECVR-KLKGHSDGISGLAFSPD---GNLLVSASYDGTIRVWDLETGSK 322 (456)
T ss_pred EEEEecCCCcEEEEeccC-----C--------eEEE-eeeccCCceEEEEECCC---CCEEEEcCCCccEEEEECCCCce
Confidence 999999999999999984 1 1222 23345667888899999 7899999999999999999998
Q ss_pred -ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEE
Q 000470 1199 -NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLI 1277 (1472)
Q Consensus 1199 -~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l 1277 (1472)
+...+....+...+++++|+|++.++++++.|+.+++||++.+..+..+...... + .+++++.. ...+.++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~-~--~~~~~~~~-----~~~~~~i 394 (456)
T KOG0266|consen 323 LCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNL-V--RCIFSPTL-----STGGKLI 394 (456)
T ss_pred eeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCc-c--eeEecccc-----cCCCCeE
Confidence 4555554222226999999999999999999999999999999988887764433 2 22223322 3457799
Q ss_pred EEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCC-cCCceE
Q 000470 1278 YVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPR-LLGIRS 1356 (1472)
Q Consensus 1278 ~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~V~s 1356 (1472)
++++.|+.|.+||..++..++.+. +| ...+..
T Consensus 395 ~sg~~d~~v~~~~~~s~~~~~~l~-----------------------------------------------~h~~~~~~~ 427 (456)
T KOG0266|consen 395 YSGSEDGSVYVWDSSSGGILQRLE-----------------------------------------------GHSKAAVSD 427 (456)
T ss_pred EEEeCCceEEEEeCCccchhhhhc-----------------------------------------------CCCCCceec
Confidence 999999999999999865544443 12 336788
Q ss_pred eccCCCC-cEEEcc--CCCeEEEEeCC
Q 000470 1357 LLPLPGG-DLLTGG--TDLKIRRWDHC 1380 (1472)
Q Consensus 1357 l~~~p~g-~llTgg--~Dg~IrlWDl~ 1380 (1472)
+.+++.. .+++++ .|+.|++|..+
T Consensus 428 ~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 428 LSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred cccCCCcCeeeecCcCCCceEEEecCC
Confidence 8888877 455666 69999999743
No 417
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.91 E-value=2.7e-23 Score=216.81 Aligned_cols=282 Identities=17% Similarity=0.252 Sum_probs=227.2
Q ss_pred eccccccceeEEEEcC---CCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCc
Q 000470 1053 HLQEHCSAVNEIAISH---DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1129 (1472)
Q Consensus 1053 ~l~~H~~~V~~lafsp---d~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~ 1129 (1472)
+-+||+.+|-.++||| +|-||+|++.||.=-+-+-+++. -.-++.+|.+.|++.+...|...-|+++.|=+
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgd------wigtfeghkgavw~~~l~~na~~aasaaadft 82 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGD------WIGTFEGHKGAVWSATLNKNATRAASAAADFT 82 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCC------cEEeeeccCcceeeeecCchhhhhhhhcccch
Confidence 3468999999999986 88899999999987666655554 56689999999999999888888899999999
Q ss_pred EEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCcc-ceeecCCC
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT-WTLKAIPE 1208 (1472)
Q Consensus 1130 I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~-~~l~~~~h 1208 (1472)
-+|||.-+.. ......|..+|..++|+.| .+.|++|+.+.-++++|+...+.. ..+. +|
T Consensus 83 akvw~a~tgd---------------elhsf~hkhivk~~af~~d---s~~lltgg~ekllrvfdln~p~App~E~~--gh 142 (334)
T KOG0278|consen 83 AKVWDAVTGD---------------ELHSFEHKHIVKAVAFSQD---SNYLLTGGQEKLLRVFDLNRPKAPPKEIS--GH 142 (334)
T ss_pred hhhhhhhhhh---------------hhhhhhhhheeeeEEeccc---chhhhccchHHHhhhhhccCCCCCchhhc--CC
Confidence 9999986311 1123457789999999998 679999999999999999876532 3333 48
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEE
Q 000470 1209 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSL 1288 (1472)
Q Consensus 1209 ~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~V 1288 (1472)
.+.|..+.|....+.+++.+.|++|++||.|++..++++..+ .+++++.+ ++++. +++.+..+.|.+
T Consensus 143 tg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~--s~VtSlEv-s~dG~----------ilTia~gssV~F 209 (334)
T KOG0278|consen 143 TGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFN--SPVTSLEV-SQDGR----------ILTIAYGSSVKF 209 (334)
T ss_pred CCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecC--CCCcceee-ccCCC----------EEEEecCceeEE
Confidence 999999999988888999999999999999999999999875 47888888 66553 556666778999
Q ss_pred EEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEE
Q 000470 1289 WNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLT 1367 (1472)
Q Consensus 1289 WDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llT 1367 (1472)
||..+...++.+... ..|.+...+|+. ++++
T Consensus 210 wdaksf~~lKs~k~P------------------------------------------------~nV~SASL~P~k~~fVa 241 (334)
T KOG0278|consen 210 WDAKSFGLLKSYKMP------------------------------------------------CNVESASLHPKKEFFVA 241 (334)
T ss_pred eccccccceeeccCc------------------------------------------------cccccccccCCCceEEe
Confidence 999887666555411 135555666654 8999
Q ss_pred ccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCcccee
Q 000470 1368 GGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSIL 1447 (1472)
Q Consensus 1368 gg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~ 1447 (1472)
||+|+.++.||..+++..-.. .++|.++|.
T Consensus 242 Gged~~~~kfDy~TgeEi~~~--------------------------------------------------nkgh~gpVh 271 (334)
T KOG0278|consen 242 GGEDFKVYKFDYNTGEEIGSY--------------------------------------------------NKGHFGPVH 271 (334)
T ss_pred cCcceEEEEEeccCCceeeec--------------------------------------------------ccCCCCceE
Confidence 999999999999887653211 135999999
Q ss_pred EEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1448 SLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1448 ~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+| .|+|+|..-+|||.||+|++|.
T Consensus 272 cV-rFSPdGE~yAsGSEDGTirlWQ 295 (334)
T KOG0278|consen 272 CV-RFSPDGELYASGSEDGTIRLWQ 295 (334)
T ss_pred EE-EECCCCceeeccCCCceEEEEE
Confidence 99 5999999999999999999993
No 418
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.91 E-value=6.8e-23 Score=216.18 Aligned_cols=290 Identities=16% Similarity=0.215 Sum_probs=214.8
Q ss_pred CCCCCCCccccccCCCCCCccc-ccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEe
Q 000470 1025 ADLTGLPSFVRTSSIPDSGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYH 1103 (1472)
Q Consensus 1025 ~~~~g~~~~~~~~~~~~~~W~p-~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~ 1103 (1472)
++.+|.-.|..++...+..|.. .|..+.++.||+++|+++..+.+.+.++|||.|.++++||+.+++. ..++.
T Consensus 18 yN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~------la~~k 91 (327)
T KOG0643|consen 18 YNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQ------LATWK 91 (327)
T ss_pred ecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcE------EEEee
Confidence 4445555555555567789995 8999999999999999999999999999999999999999999873 33444
Q ss_pred ccCCceEEEEEecCCCEEEEEeCC-----CcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCce
Q 000470 1104 LEGSRALCTMMLRHSAQVVVGACD-----GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASH 1178 (1472)
Q Consensus 1104 ~~~~~I~~v~f~~~~~~las~s~D-----G~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~ 1178 (1472)
. +.+|..+.|+.+|+.++.++++ +.|.++|++.... ......+..+....+ ..++..-|.|- ++
T Consensus 92 ~-~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~------~~~s~ep~~kI~t~~-skit~a~Wg~l---~~ 160 (327)
T KOG0643|consen 92 T-NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSS------DIDSEEPYLKIPTPD-SKITSALWGPL---GE 160 (327)
T ss_pred c-CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChh------hhcccCceEEecCCc-cceeeeeeccc---CC
Confidence 3 3459999999999998887754 6799999983211 111122333333333 45566669987 77
Q ss_pred EEEEEeCCCeEEEEeCCCCCc-cceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCcee
Q 000470 1179 MFMYSTQNCGIHLWDTRSNSN-TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEK 1257 (1472)
Q Consensus 1179 ~L~~at~dg~I~iwDlrt~~~-~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~ 1257 (1472)
.|++|..+|.|..||++++.. +..-+. |...|+.++++++..++++|+.|.+-++||.++...++++.- ..|+++
T Consensus 161 ~ii~Ghe~G~is~~da~~g~~~v~s~~~--h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t--e~PvN~ 236 (327)
T KOG0643|consen 161 TIIAGHEDGSISIYDARTGKELVDSDEE--HSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT--ERPVNT 236 (327)
T ss_pred EEEEecCCCcEEEEEcccCceeeechhh--hccccccccccCCcceEEecccCccceeeeccceeeEEEeee--cccccc
Confidence 999999999999999999854 333333 778999999999999999999999999999999999998874 457888
Q ss_pred EEeecCCCCCccccCCCCEEEEEEcCC--eEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccc
Q 000470 1258 MCLFVPPPNAAVSTTARPLIYVAAGCN--EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNV 1335 (1472)
Q Consensus 1258 l~~~~p~~~~~~~~~~~~~l~vas~dg--~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 1335 (1472)
..+ .|... .++.|+|.. .|+.=+.+.|+--..|-
T Consensus 237 aai-sP~~d---------~VilgGGqeA~dVTTT~~r~GKFEArFy---------------------------------- 272 (327)
T KOG0643|consen 237 AAI-SPLLD---------HVILGGGQEAMDVTTTSTRAGKFEARFY---------------------------------- 272 (327)
T ss_pred eec-ccccc---------eEEecCCceeeeeeeecccccchhhhHH----------------------------------
Confidence 877 77654 566665542 23333322221100000
Q ss_pred cccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCC
Q 000470 1336 NQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1336 ~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~ 1380 (1472)
...-.+++....+|..+|++++++|+| .+.+||+||.||+.-++
T Consensus 273 -h~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 273 -HLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred -HHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEec
Confidence 001124556668899999999999999 56699999999998654
No 419
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.90 E-value=7.3e-24 Score=229.31 Aligned_cols=264 Identities=18% Similarity=0.192 Sum_probs=208.8
Q ss_pred CCCCcccc-cceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCC
Q 000470 1040 PDSGWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1040 ~~~~W~p~-G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~ 1118 (1472)
.-..|+-. -.++..|.||+|+|.|+.| |.+.++|||.|.||+|||+++++ ...++-+|...|..+.|+.
T Consensus 218 TikiWD~n~~~c~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge------~l~tlihHceaVLhlrf~n-- 287 (499)
T KOG0281|consen 218 TIKIWDKNSLECLKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGE------PLNTLIHHCEAVLHLRFSN-- 287 (499)
T ss_pred ceEEeccccHHHHHhhhcCCCcEEeeec--cceEEEecCCCceEEEEeccCCc------hhhHHhhhcceeEEEEEeC--
Confidence 45679854 5788999999999999999 56799999999999999999988 5667788888999999964
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
..+++++.|.+|.|||+... ....++....+|.+.|+++.|+.. ++++++.|.+|++||+.+++
T Consensus 288 g~mvtcSkDrsiaVWdm~sp-----------s~it~rrVLvGHrAaVNvVdfd~k-----yIVsASgDRTikvW~~st~e 351 (499)
T KOG0281|consen 288 GYMVTCSKDRSIAVWDMASP-----------TDITLRRVLVGHRAAVNVVDFDDK-----YIVSASGDRTIKVWSTSTCE 351 (499)
T ss_pred CEEEEecCCceeEEEeccCc-----------hHHHHHHHHhhhhhheeeeccccc-----eEEEecCCceEEEEecccee
Confidence 58999999999999999731 123456667788889999988754 99999999999999999999
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEE
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1278 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~ 1278 (1472)
.+.++.+ |...|-|+.+. |+.+++|++|.+|++||+..|.+++.++. |..-|.++.| +.+.++
T Consensus 352 fvRtl~g--HkRGIAClQYr--~rlvVSGSSDntIRlwdi~~G~cLRvLeG-HEeLvRciRF------------d~krIV 414 (499)
T KOG0281|consen 352 FVRTLNG--HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRF------------DNKRIV 414 (499)
T ss_pred eehhhhc--ccccceehhcc--CeEEEecCCCceEEEEeccccHHHHHHhc-hHHhhhheee------------cCceee
Confidence 9999977 88888888775 78999999999999999999999988774 6677888888 234689
Q ss_pred EEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEec
Q 000470 1279 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1358 (1472)
Q Consensus 1279 vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1358 (1472)
+|+.||.|+|||+.++.-..... +..-+..+ ..|.+.|-.+-
T Consensus 415 SGaYDGkikvWdl~aaldpra~~-----------------------------------~~~Cl~~l---v~hsgRVFrLQ 456 (499)
T KOG0281|consen 415 SGAYDGKIKVWDLQAALDPRAPA-----------------------------------STLCLRTL---VEHSGRVFRLQ 456 (499)
T ss_pred eccccceEEEEecccccCCcccc-----------------------------------cchHHHhh---hhccceeEEEe
Confidence 99999999999998653211110 00000000 11233455555
Q ss_pred cCCCCcEEEccCCCeEEEEeCCCCCCc
Q 000470 1359 PLPGGDLLTGGTDLKIRRWDHCSPGRS 1385 (1472)
Q Consensus 1359 ~~p~g~llTgg~Dg~IrlWDl~~~~~s 1385 (1472)
|. +-.+++++.|.+|-+||+.++-.+
T Consensus 457 FD-~fqIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 457 FD-EFQIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred ec-ceEEEeccCCCeEEEEEcCCCCcc
Confidence 52 237889999999999999877655
No 420
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=6.6e-24 Score=246.11 Aligned_cols=198 Identities=17% Similarity=0.188 Sum_probs=151.5
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCc
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW 81 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~ 81 (1472)
.+=||++|..|+++..+|+||+|++ |++-.+|-+.+-+.|..+++++.+|.+|+++.|+.|+|||||||+|||||.+|+
T Consensus 688 n~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGH 767 (1034)
T KOG0608|consen 688 NEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH 767 (1034)
T ss_pred CcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCc
Confidence 3568999999999999999999999 699999988888999999999999999999999999999999999999999999
Q ss_pred EEEEeccccccccCC--------CCCCCCCc---------------------------eeeccCCCCccccCcccccccC
Q 000470 82 LYLSDFASFKPTYIP--------YDDPSDFS---------------------------FFFDTGGKRLCYLAPERFYEHG 126 (1472)
Q Consensus 82 vkL~DFg~a~~~~~~--------~~~~~~~~---------------------------~~~~~~~gt~~Y~APE~~~~~~ 126 (1472)
+||+|||++...... .+-...-+ .......||+.|+|||++..
T Consensus 768 IKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r-- 845 (1034)
T KOG0608|consen 768 IKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR-- 845 (1034)
T ss_pred eeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc--
Confidence 999999987533211 11000000 00113468999999998863
Q ss_pred CccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHH--HHhcCCCCC--cccCCCCCHHHHHHHHHhcccCcCCC
Q 000470 127 GEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA--YRRGQYDPS--QHLEKIPDSGIRKMILHMIQLEPELR 202 (1472)
Q Consensus 127 ~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~--~~~~~~~~~--~~l~~~~~~~l~~LI~~mL~~dP~~R 202 (1472)
..|+..+|.||.|+|||||+.|++||....... ++....... .......++++.+||.+++ .+++.|
T Consensus 846 --------~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~R 916 (1034)
T KOG0608|consen 846 --------TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSR 916 (1034)
T ss_pred --------cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhh
Confidence 357888999999999999999999996443221 111111111 1122356788999999876 568888
Q ss_pred C---CHHHHHHH
Q 000470 203 F---SAESYLQN 211 (1472)
Q Consensus 203 p---sa~elL~~ 211 (1472)
. .++|+-.|
T Consensus 917 LGkng~d~vKaH 928 (1034)
T KOG0608|consen 917 LGKNGADQVKAH 928 (1034)
T ss_pred hcccchhhhhcC
Confidence 8 46667776
No 421
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.90 E-value=8.7e-24 Score=263.45 Aligned_cols=185 Identities=21% Similarity=0.261 Sum_probs=138.8
Q ss_pred CeEEEEecccCC-cHHHHHhCCCCC-CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEEecccccccc
Q 000470 17 KAAYLLRQYFFN-SLRDRLSTPPFL-SLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 94 (1472)
Q Consensus 17 ~~~~lV~Ey~~g-sL~d~l~~~~~l-~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~ 94 (1472)
..+||-||||+. .|.+++..+.+. ...+.+.+++||++||.|+|++|||||||||.||++++.+.|||+|||+++...
T Consensus 669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~ 748 (1351)
T KOG1035|consen 669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLK 748 (1351)
T ss_pred eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhh
Confidence 468999999995 667777766654 478899999999999999999999999999999999999999999999987621
Q ss_pred ----------CCC-CCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCch
Q 000470 95 ----------IPY-DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS 163 (1472)
Q Consensus 95 ----------~~~-~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~ 163 (1472)
.+. ..............||.-|+|||++.... ...|+.|+|+||||+|++||+. ||.-+
T Consensus 749 ~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~-------~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts 818 (1351)
T KOG1035|consen 749 ENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS-------SNKYNSKIDMYSLGIVLFEMLY---PFGTS 818 (1351)
T ss_pred hhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc-------cccccchhhhHHHHHHHHHHhc---cCCch
Confidence 000 01111111234566899999999986432 2579999999999999999984 35422
Q ss_pred -----HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 164 -----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 164 -----~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+..++.+..+....+....-+.-..+|++||+.||.+||||.|+|++
T Consensus 819 MERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 819 MERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred HHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence 233344444443322333333456899999999999999999999987
No 422
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.90 E-value=7.9e-24 Score=268.00 Aligned_cols=192 Identities=16% Similarity=0.212 Sum_probs=160.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpe 72 (1472)
++|||||+++++.-+....+|++|||+ |+|..+|++. ..|+..+...++.||++|++||+++++|||||...
T Consensus 752 f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaR 831 (1025)
T KOG1095|consen 752 FDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAAR 831 (1025)
T ss_pred CCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhh
Confidence 589999999999999999999999999 7999999874 24899999999999999999999999999999999
Q ss_pred CEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCC--CCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 73 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG--KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 73 NILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~--gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
|+|++....|||+|||+|+.++.. .+|..... -...|||||.|. +..++.|+||||||+++
T Consensus 832 NCLL~~~r~VKIaDFGlArDiy~~-------~yyr~~~~a~lPvkWm~PEsl~----------d~iFtskSDvWsFGVll 894 (1025)
T KOG1095|consen 832 NCLLDERRVVKIADFGLARDIYDK-------DYYRKHGEAMLPVKWMPPESLK----------DGIFTSKSDVWSFGVLL 894 (1025)
T ss_pred heeecccCcEEEcccchhHhhhhc-------hheeccCccccceecCCHHHHh----------hcccccccchhhhHHHH
Confidence 999999999999999999965422 12222222 235699999886 45899999999999999
Q ss_pred HHHHh-CCCCCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 151 AELFL-EVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 151 ~eLlt-g~~pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
||+|+ |.+||......+ +..+. .-..+..++..+.+++..||+.+|++||++..++++.
T Consensus 895 WEifslG~~PY~~~~n~~v~~~~~~gg---RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~ 958 (1025)
T KOG1095|consen 895 WEIFSLGATPYPSRSNFEVLLDVLEGG---RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQD 958 (1025)
T ss_pred HHHHhCCCCCCCCcchHHHHHHHHhCC---ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhh
Confidence 99999 589996544333 22332 3334566778899999999999999999999999863
No 423
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=3.3e-22 Score=238.20 Aligned_cols=270 Identities=17% Similarity=0.268 Sum_probs=220.7
Q ss_pred CCCCCcccc-cceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC
Q 000470 1039 IPDSGWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH 1117 (1472)
Q Consensus 1039 ~~~~~W~p~-G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~ 1117 (1472)
..-..|+-+ |.|+..|.||.|+|..++|+|++.+||||++|-.||||+...- |+..+..+|-..|..+.|++.
T Consensus 31 G~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~r------rclftL~GHlDYVRt~~FHhe 104 (1202)
T KOG0292|consen 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTR------RCLFTLLGHLDYVRTVFFHHE 104 (1202)
T ss_pred ceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccc------eehhhhccccceeEEeeccCC
Confidence 345689965 9999999999999999999999999999999999999998764 366677788889999999999
Q ss_pred CCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCC
Q 000470 1118 SAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN 1197 (1472)
Q Consensus 1118 ~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~ 1197 (1472)
--++++||+|.+|+||+..+ ..+.....+|..-|.|..|+|. ...+++|+-|-+|++||+..-
T Consensus 105 yPWIlSASDDQTIrIWNwqs--------------r~~iavltGHnHYVMcAqFhpt---EDlIVSaSLDQTVRVWDisGL 167 (1202)
T KOG0292|consen 105 YPWILSASDDQTIRIWNWQS--------------RKCIAVLTGHNHYVMCAQFHPT---EDLIVSASLDQTVRVWDISGL 167 (1202)
T ss_pred CceEEEccCCCeEEEEeccC--------------CceEEEEecCceEEEeeccCCc---cceEEEecccceEEEEeecch
Confidence 99999999999999999973 1334455678888999999997 569999999999999998531
Q ss_pred Cc---------------------------cceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEec-
Q 000470 1198 SN---------------------------TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY- 1249 (1472)
Q Consensus 1198 ~~---------------------------~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~- 1249 (1472)
+. +-+.-..+|...|+-++|+|.-..+++|+.|..|++|.+.- .+.|..
T Consensus 168 Rkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmne---tKaWEvD 244 (1202)
T KOG0292|consen 168 RKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE---TKAWEVD 244 (1202)
T ss_pred hccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecc---ccceeeh
Confidence 10 00111134778899999999999999999999999999863 345553
Q ss_pred ---cccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCC
Q 000470 1250 ---SQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSN 1326 (1472)
Q Consensus 1250 ---~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~ 1326 (1472)
+|...|.++.| ||... +|++.+.|+.|+|||+.+..++++|+..+.
T Consensus 245 tcrgH~nnVssvlf-hp~q~---------lIlSnsEDksirVwDm~kRt~v~tfrrend--------------------- 293 (1202)
T KOG0292|consen 245 TCRGHYNNVSSVLF-HPHQD---------LILSNSEDKSIRVWDMTKRTSVQTFRREND--------------------- 293 (1202)
T ss_pred hhhcccCCcceEEe-cCccc---------eeEecCCCccEEEEecccccceeeeeccCC---------------------
Confidence 46667888888 88765 889999999999999999999999973222
Q ss_pred CCccccccccccccccccCCCCCCcCCceEeccCCCCcEEEccCCCeEEEEeCCCCCCceEEeCC
Q 000470 1327 PKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGP 1391 (1472)
Q Consensus 1327 ~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~llTgg~Dg~IrlWDl~~~~~s~vv~g~ 1391 (1472)
..+.++.+|...|+.+|.|+-+.+|.++.....+.+.|.
T Consensus 294 --------------------------RFW~laahP~lNLfAAgHDsGm~VFkleRErpa~~v~~n 332 (1202)
T KOG0292|consen 294 --------------------------RFWILAAHPELNLFAAGHDSGMIVFKLERERPAYAVNGN 332 (1202)
T ss_pred --------------------------eEEEEEecCCcceeeeecCCceEEEEEcccCceEEEcCC
Confidence 367788888888888888888888888877777777664
No 424
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.90 E-value=2.3e-22 Score=236.93 Aligned_cols=281 Identities=21% Similarity=0.347 Sum_probs=227.4
Q ss_pred eccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEE
Q 000470 1053 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHM 1132 (1472)
Q Consensus 1053 ~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~v 1132 (1472)
.+.||+..|.+++||.++..++||+. ++++||+..++. +..+... +.+.+.+|.|+++++++|...|.+.+
T Consensus 368 ~~~GHR~dVRsl~vS~d~~~~~Sga~-~SikiWn~~t~k------ciRTi~~--~y~l~~~Fvpgd~~Iv~G~k~Gel~v 438 (888)
T KOG0306|consen 368 EIGGHRSDVRSLCVSSDSILLASGAG-ESIKIWNRDTLK------CIRTITC--GYILASKFVPGDRYIVLGTKNGELQV 438 (888)
T ss_pred eeccchhheeEEEeecCceeeeecCC-CcEEEEEccCcc------eeEEecc--ccEEEEEecCCCceEEEeccCCceEE
Confidence 45699999999999999888888766 689999999876 3344433 36999999999999999999999999
Q ss_pred EEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc-----c-------
Q 000470 1133 FSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN-----T------- 1200 (1472)
Q Consensus 1133 wdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~-----~------- 1200 (1472)
||+.... .+.. ...|...+..++..|+ +..+++|+.|.+|++||..-... .
T Consensus 439 fdlaS~~-------------l~Et-i~AHdgaIWsi~~~pD---~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~ 501 (888)
T KOG0306|consen 439 FDLASAS-------------LVET-IRAHDGAIWSISLSPD---NKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKH 501 (888)
T ss_pred EEeehhh-------------hhhh-hhccccceeeeeecCC---CCceEEecCCcEEEEEeEEEEeccCcccceeeeecc
Confidence 9997311 1111 2256667888889998 77899999999999999863211 1
Q ss_pred -ceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEE
Q 000470 1201 -WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1279 (1472)
Q Consensus 1201 -~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~v 1279 (1472)
.+++. ...|.|+.++|+|.+|++|=-|.++++|-+.+.+-.-++. +|.-||.++.. +|+.. ++++
T Consensus 502 ~rtLel---~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLY-GHkLPV~smDI-S~DSk---------livT 567 (888)
T KOG0306|consen 502 TRTLEL---EDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLY-GHKLPVLSMDI-SPDSK---------LIVT 567 (888)
T ss_pred ceEEec---cccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeec-ccccceeEEec-cCCcC---------eEEe
Confidence 22222 4679999999999999999999999999988776666655 47889999999 77765 8999
Q ss_pred EEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEecc
Q 000470 1280 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1359 (1472)
Q Consensus 1280 as~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1359 (1472)
|+.|..|+||-+.=|.|.+.+-. |+-.|.++.|
T Consensus 568 gSADKnVKiWGLdFGDCHKS~fA-----------------------------------------------HdDSvm~V~F 600 (888)
T KOG0306|consen 568 GSADKNVKIWGLDFGDCHKSFFA-----------------------------------------------HDDSVMSVQF 600 (888)
T ss_pred ccCCCceEEeccccchhhhhhhc-----------------------------------------------ccCceeEEEE
Confidence 99999999999999999877653 3337899999
Q ss_pred CCCC-cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCC
Q 000470 1360 LPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDS 1438 (1472)
Q Consensus 1360 ~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 1438 (1472)
.|.. .+.|+|-|+.|+.||-..-+..+.
T Consensus 601 ~P~~~~FFt~gKD~kvKqWDg~kFe~iq~--------------------------------------------------- 629 (888)
T KOG0306|consen 601 LPKTHLFFTCGKDGKVKQWDGEKFEEIQK--------------------------------------------------- 629 (888)
T ss_pred cccceeEEEecCcceEEeechhhhhhhee---------------------------------------------------
Confidence 9977 677999999999999765544332
Q ss_pred CCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1439 AGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1439 ~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+.+|+.-|+++| ..++|.+++|+|+|-.|++|.
T Consensus 630 L~~H~~ev~cLa-v~~~G~~vvs~shD~sIRlwE 662 (888)
T KOG0306|consen 630 LDGHHSEVWCLA-VSPNGSFVVSSSHDKSIRLWE 662 (888)
T ss_pred eccchheeeeeE-EcCCCCeEEeccCCceeEeee
Confidence 335999999997 889999999999999999994
No 425
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=7.9e-24 Score=229.12 Aligned_cols=187 Identities=19% Similarity=0.247 Sum_probs=155.8
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
|||.+|.++.+|+++..+++|.||++ |+|--.+..+..|+++.++++..+|+.||.|||++||+.||||.+|+|++..|
T Consensus 309 n~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeg 388 (593)
T KOG0695|consen 309 NNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEG 388 (593)
T ss_pred CCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCC
Confidence 79999999999999999999999999 69888788777899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
++||+|+|++|.-..+.+. ..+.|||+.|+|||++. +..|+..+|.|+||++++||+.|+.||
T Consensus 389 hikltdygmcke~l~~gd~-------tstfcgtpnyiapeilr----------geeygfsvdwwalgvlmfemmagrspf 451 (593)
T KOG0695|consen 389 HIKLTDYGMCKEGLGPGDT-------TSTFCGTPNYIAPEILR----------GEEYGFSVDWWALGVLMFEMMAGRSPF 451 (593)
T ss_pred ceeecccchhhcCCCCCcc-------cccccCCCcccchhhhc----------ccccCceehHHHHHHHHHHHHcCCCCc
Confidence 9999999999876544442 35778999999999876 557899999999999999999999999
Q ss_pred Cch-------HHHHHH-hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH
Q 000470 161 ELS-------HLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA 205 (1472)
Q Consensus 161 ~~~-------~~~~~~-~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa 205 (1472)
+.- +...|. +........++...+-.+..++...|.+||++|...
T Consensus 452 divgm~n~d~ntedylfqvilekqiriprslsvkas~vlkgflnkdp~erlgc 504 (593)
T KOG0695|consen 452 DIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGC 504 (593)
T ss_pred ceecCCCcccchhHHHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhcCC
Confidence 621 112221 111222223455556677889999999999999853
No 426
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=1.8e-22 Score=223.45 Aligned_cols=252 Identities=18% Similarity=0.225 Sum_probs=201.9
Q ss_pred ceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEec-cCCceEEEEEecCCCEEEEEeCC
Q 000470 1049 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHL-EGSRALCTMMLRHSAQVVVGACD 1127 (1472)
Q Consensus 1049 ~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~-~~~~I~~v~f~~~~~~las~s~D 1127 (1472)
+++.++.+|..+|.-|.||||.+++++|+.|..+++||+.+++.. ..|.. ++..+.+++|+|+|..|++|+.|
T Consensus 260 kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~------~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d 333 (519)
T KOG0293|consen 260 KLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLR------HLYPSGLGFSVSSCAWCPDGFRFVTGSPD 333 (519)
T ss_pred eeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhh------hhcccCcCCCcceeEEccCCceeEecCCC
Confidence 578999999999999999999999999999999999999999843 33332 35679999999999999999999
Q ss_pred CcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCC
Q 000470 1128 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207 (1472)
Q Consensus 1128 G~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~ 1207 (1472)
++|..||.+. +. ...+.......+..++..+| |..+++.+.|..|++++..+........
T Consensus 334 r~i~~wdlDg------n~--------~~~W~gvr~~~v~dlait~D---gk~vl~v~~d~~i~l~~~e~~~dr~lis--- 393 (519)
T KOG0293|consen 334 RTIIMWDLDG------NI--------LGNWEGVRDPKVHDLAITYD---GKYVLLVTVDKKIRLYNREARVDRGLIS--- 393 (519)
T ss_pred CcEEEecCCc------ch--------hhcccccccceeEEEEEcCC---CcEEEEEecccceeeechhhhhhhcccc---
Confidence 9999999982 11 12222333356788888998 7889999999999999998766654444
Q ss_pred CccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccc-cCCceeEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000470 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ-VCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1286 (1472)
Q Consensus 1208 h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~-~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V 1286 (1472)
.+.+|++++++.+|+++++-=.+..+++||+.....+..+.... ..-|-+-|| .. .+..++++|+.|+.|
T Consensus 394 e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCF-gg--------~~~~fiaSGSED~kv 464 (519)
T KOG0293|consen 394 EEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCF-GG--------GNDKFIASGSEDSKV 464 (519)
T ss_pred ccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEecc-CC--------CCcceEEecCCCceE
Confidence 36789999999999999999999999999999776666554322 223334444 21 123589999999999
Q ss_pred EEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC--c
Q 000470 1287 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG--D 1364 (1472)
Q Consensus 1287 ~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g--~ 1364 (1472)
.||+..+|+.+.++. ||...|+|++|.|.. .
T Consensus 465 yIWhr~sgkll~~Ls-----------------------------------------------GHs~~vNcVswNP~~p~m 497 (519)
T KOG0293|consen 465 YIWHRISGKLLAVLS-----------------------------------------------GHSKTVNCVSWNPADPEM 497 (519)
T ss_pred EEEEccCCceeEeec-----------------------------------------------CCcceeeEEecCCCCHHH
Confidence 999999999888875 344479999999987 6
Q ss_pred EEEccCCCeEEEEeCCCC
Q 000470 1365 LLTGGTDLKIRRWDHCSP 1382 (1472)
Q Consensus 1365 llTgg~Dg~IrlWDl~~~ 1382 (1472)
+++||+||+||+|.....
T Consensus 498 ~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 498 FASASDDGTIRIWGPSDN 515 (519)
T ss_pred hhccCCCCeEEEecCCcc
Confidence 889999999999987644
No 427
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.90 E-value=1.1e-23 Score=244.14 Aligned_cols=194 Identities=16% Similarity=0.152 Sum_probs=156.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
+.||||+++++++.+ ...|||||+++ |.|..|+..++ .|+......+++||+.||.|||+.+.|||||...||||.+
T Consensus 448 fdHphIikLIGv~~e-~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS 526 (974)
T KOG4257|consen 448 FDHPHIIKLIGVCVE-QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS 526 (974)
T ss_pred CCCcchhheeeeeec-cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC
Confidence 479999999999976 46899999999 99999998754 5899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCC-CCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG-KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~-gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
...|||+|||+++... +..+|..+.+ -..-|||||.+. -..++.++|||-||+++||++. |
T Consensus 527 p~CVKLaDFGLSR~~e-------d~~yYkaS~~kLPIKWmaPESIN----------fRrFTtASDVWMFgVCmWEIl~lG 589 (974)
T KOG4257|consen 527 PQCVKLADFGLSRYLE-------DDAYYKASRGKLPIKWMAPESIN----------FRRFTTASDVWMFGVCMWEILSLG 589 (974)
T ss_pred cceeeecccchhhhcc-------ccchhhccccccceeecCccccc----------hhcccchhhHHHHHHHHHHHHHhc
Confidence 9999999999998662 2233333322 244599999653 4578999999999999999876 6
Q ss_pred CCCCCc-hHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFEL-SHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~~-~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
..||.+ .+-.-+.+.+.......|+.+++.+..|+.+||.+||.+||.+.|+...+
T Consensus 590 vkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~l 646 (974)
T KOG4257|consen 590 VKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAIL 646 (974)
T ss_pred CCccccccccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHH
Confidence 555543 22222222222334456778889999999999999999999998887654
No 428
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=4.6e-22 Score=208.66 Aligned_cols=283 Identities=19% Similarity=0.249 Sum_probs=210.0
Q ss_pred eeEEEEcC--CCCE-EEEEe-----CCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC-CCEEEEEeCCCcEE
Q 000470 1061 VNEIAISH--DHSF-FVSAS-----DDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH-SAQVVVGACDGIIH 1131 (1472)
Q Consensus 1061 V~~lafsp--d~~~-laSgS-----~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~-~~~las~s~DG~I~ 1131 (1472)
-.++.||| ++++ +||+. ..|++.|-|+.+..... ..+.|....+ ..+++|+++ .+.+++|+.||+++
T Consensus 11 GysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~---e~~s~d~~D~-LfdV~Wse~~e~~~~~a~GDGSLr 86 (311)
T KOG0277|consen 11 GYSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQ---ECQSYDTEDG-LFDVAWSENHENQVIAASGDGSLR 86 (311)
T ss_pred cceeEecccccchhheeehhhcccccCceEEEEecCCCCCeE---EEEeeecccc-eeEeeecCCCcceEEEEecCceEE
Confidence 35788888 4443 33332 46889999987544322 3345555554 999999995 67888999999999
Q ss_pred EEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccc
Q 000470 1132 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGY 1211 (1472)
Q Consensus 1132 vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~ 1211 (1472)
+||..... .++..+ .+|...|..+.|++.. +..++++++||+|++||...+.-+.++.+ |...
T Consensus 87 l~d~~~~s------------~Pi~~~-kEH~~EV~Svdwn~~~--r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~g--h~~~ 149 (311)
T KOG0277|consen 87 LFDLTMPS------------KPIHKF-KEHKREVYSVDWNTVR--RRIFLTSSWDGTIKLWDPNRPNSVQTFNG--HNSC 149 (311)
T ss_pred EeccCCCC------------cchhHH-HhhhhheEEecccccc--ceeEEeeccCCceEeecCCCCcceEeecC--CccE
Confidence 99965211 123333 3456667888888864 55888889999999999999988999887 8999
Q ss_pred eEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEE
Q 000470 1212 VSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1290 (1472)
Q Consensus 1212 Itsl~~sp-~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWD 1290 (1472)
|....|+| .++.+++++.||++++||+|..-....+.. |...|.++.|..- +.+.+++|+.|+.|++||
T Consensus 150 Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~a-h~~Eil~cdw~ky---------~~~vl~Tg~vd~~vr~wD 219 (311)
T KOG0277|consen 150 IYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEA-HNSEILCCDWSKY---------NHNVLATGGVDNLVRGWD 219 (311)
T ss_pred EEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEe-ccceeEeeccccc---------CCcEEEecCCCceEEEEe
Confidence 99999999 679999999999999999997644444444 5567888877322 345889999999999999
Q ss_pred cCCCeEE-EEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC--cEEE
Q 000470 1291 AENGSCH-QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG--DLLT 1367 (1472)
Q Consensus 1291 l~t~~~~-~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g--~llT 1367 (1472)
+++.... .+ ..+|.-.|+.+.|+|.. .|+|
T Consensus 220 ir~~r~pl~e-----------------------------------------------L~gh~~AVRkvk~Sph~~~lLaS 252 (311)
T KOG0277|consen 220 IRNLRTPLFE-----------------------------------------------LNGHGLAVRKVKFSPHHASLLAS 252 (311)
T ss_pred hhhcccccee-----------------------------------------------ecCCceEEEEEecCcchhhHhhh
Confidence 9875311 11 12455579999999976 6779
Q ss_pred ccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCcccee
Q 000470 1368 GGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSIL 1447 (1472)
Q Consensus 1368 gg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~ 1447 (1472)
++-|.++|+||...+.... +...-|++-|-
T Consensus 253 asYDmT~riw~~~~~ds~~--------------------------------------------------e~~~~HtEFv~ 282 (311)
T KOG0277|consen 253 ASYDMTVRIWDPERQDSAI--------------------------------------------------ETVDHHTEFVC 282 (311)
T ss_pred ccccceEEecccccchhhh--------------------------------------------------hhhhccceEEe
Confidence 9999999999987554321 01112888898
Q ss_pred EEeeeec-CCcEEEEEcCCceEEEcC
Q 000470 1448 SLGSVKL-NQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1448 ~va~~~~-~~~~LvS~s~DG~IkVWk 1472 (1472)
.+ .|+. +...+++++.|+.++||+
T Consensus 283 g~-Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 283 GL-DWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred cc-ccccccCceeeecccccceeeec
Confidence 88 4765 478899999999999995
No 429
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.89 E-value=2.1e-21 Score=222.41 Aligned_cols=254 Identities=25% Similarity=0.385 Sum_probs=204.3
Q ss_pred CCccc-ccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCE
Q 000470 1042 SGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1120 (1472)
Q Consensus 1042 ~~W~p-~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~ 1120 (1472)
..|+. .+.....+.+|...|..+.|+|+++++++++.||.|++||+.+.+ ....+..|...|.++.|.++++.
T Consensus 34 ~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~ 107 (289)
T cd00200 34 KVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGE------CVRTLTGHTSYVSSVAFSPDGRI 107 (289)
T ss_pred EEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCccc------ceEEEeccCCcEEEEEEcCCCCE
Confidence 35764 456778889999999999999999999999999999999998754 33455567778999999999888
Q ss_pred EEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCcc
Q 000470 1121 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1200 (1472)
Q Consensus 1121 las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~ 1200 (1472)
+++++.||.|++|++.... ...... .+...+..+.|+|+ +.++++++.+|.|++||+++++..
T Consensus 108 ~~~~~~~~~i~~~~~~~~~-------------~~~~~~-~~~~~i~~~~~~~~---~~~l~~~~~~~~i~i~d~~~~~~~ 170 (289)
T cd00200 108 LSSSSRDKTIKVWDVETGK-------------CLTTLR-GHTDWVNSVAFSPD---GTFVASSSQDGTIKLWDLRTGKCV 170 (289)
T ss_pred EEEecCCCeEEEEECCCcE-------------EEEEec-cCCCcEEEEEEcCc---CCEEEEEcCCCcEEEEEccccccc
Confidence 8888889999999997210 111112 34556888889997 568888888999999999988888
Q ss_pred ceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEE
Q 000470 1201 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1280 (1472)
Q Consensus 1201 ~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~va 1280 (1472)
..+.. |.+.+++++|+|+++.+++|+.+|.|.+||++.+..+..+.. +..++..+.+ +|+. .+++++
T Consensus 171 ~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~-~~~~---------~~~~~~ 237 (289)
T cd00200 171 ATLTG--HTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRG-HENGVNSVAF-SPDG---------YLLASG 237 (289)
T ss_pred eeEec--CccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhh-cCCceEEEEE-cCCC---------cEEEEE
Confidence 87775 777999999999999999999999999999998888777643 4557888888 6653 366666
Q ss_pred EcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccC
Q 000470 1281 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1360 (1472)
Q Consensus 1281 s~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~ 1360 (1472)
+.++.+.+||+.+++....+.. +...|.++.|+
T Consensus 238 ~~~~~i~i~~~~~~~~~~~~~~-----------------------------------------------~~~~i~~~~~~ 270 (289)
T cd00200 238 SEDGTIRVWDLRTGECVQTLSG-----------------------------------------------HTNSVTSLAWS 270 (289)
T ss_pred cCCCcEEEEEcCCceeEEEccc-----------------------------------------------cCCcEEEEEEC
Confidence 6699999999998776655541 12268899999
Q ss_pred CCC-cEEEccCCCeEEEEe
Q 000470 1361 PGG-DLLTGGTDLKIRRWD 1378 (1472)
Q Consensus 1361 p~g-~llTgg~Dg~IrlWD 1378 (1472)
+++ .+++++.|+.|++||
T Consensus 271 ~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 271 PDGKRLASGSADGTIRIWD 289 (289)
T ss_pred CCCCEEEEecCCCeEEecC
Confidence 986 788999999999996
No 430
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.89 E-value=5.2e-23 Score=266.03 Aligned_cols=91 Identities=23% Similarity=0.330 Sum_probs=86.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++.++......||||||+. ++|.+++...+.+++..++.|+.||+.||+|||.+||+||||||+|||++.+
T Consensus 61 l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~ 140 (669)
T cd05610 61 SKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNE 140 (669)
T ss_pred cCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCC
Confidence 579999999999999999999999998 6999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccc
Q 000470 80 NWLYLSDFASFK 91 (1472)
Q Consensus 80 ~~vkL~DFg~a~ 91 (1472)
+.++|+|||+++
T Consensus 141 g~vkL~DFGls~ 152 (669)
T cd05610 141 GHIKLTDFGLSK 152 (669)
T ss_pred CCEEEEeCCCCc
Confidence 999999999876
No 431
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.89 E-value=5.6e-22 Score=236.24 Aligned_cols=255 Identities=17% Similarity=0.219 Sum_probs=203.2
Q ss_pred ccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEE
Q 000470 1054 LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMF 1133 (1472)
Q Consensus 1054 l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vw 1133 (1472)
|+.-+..|-+++|+|....++|+=..|.|++||.+-+. ....|..|.++|..++|+|....|++||+|-.|+||
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~t------li~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVW 78 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGT------LIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVW 78 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhhhh------HHhhhhccCCccceeeecCCCCeEEecCCccEEEEE
Confidence 44456789999999999999999999999999997654 344677899999999999999999999999999999
Q ss_pred EccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceE
Q 000470 1134 SVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVS 1213 (1472)
Q Consensus 1134 dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~It 1213 (1472)
+... . .+.-....|-+-|..+.|++. -+++++++.|-+|++|+..+..++..+.+ |...|.
T Consensus 79 nYk~-r-------------rclftL~GHlDYVRt~~FHhe---yPWIlSASDDQTIrIWNwqsr~~iavltG--HnHYVM 139 (1202)
T KOG0292|consen 79 NYKT-R-------------RCLFTLLGHLDYVRTVFFHHE---YPWILSASDDQTIRIWNWQSRKCIAVLTG--HNHYVM 139 (1202)
T ss_pred eccc-c-------------eehhhhccccceeEEeeccCC---CceEEEccCCCeEEEEeccCCceEEEEec--CceEEE
Confidence 9873 1 111112355667788889998 77999999999999999999999999988 788999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCcc----------------------------cceEeccccCCceeEEeecCCC
Q 000470 1214 SLVTGPCGNWFVSGSSRGVLTLWDLRFLVP----------------------------VNSWQYSQVCPIEKMCLFVPPP 1265 (1472)
Q Consensus 1214 sl~~sp~g~~LvsGssdG~I~lWDlr~~~~----------------------------i~s~~~~~~~~I~~l~~~~p~~ 1265 (1472)
|..|+|....+++||-|.+|++||+.-... ++-.-.+|..+|+-+.| ||.
T Consensus 140 cAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAf-hpT- 217 (1202)
T KOG0292|consen 140 CAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAF-HPT- 217 (1202)
T ss_pred eeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEe-cCC-
Confidence 999999999999999999999999743111 11122234445555555 553
Q ss_pred CCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccC
Q 000470 1266 NAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELN 1345 (1472)
Q Consensus 1266 ~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~ 1345 (1472)
-+++++|+.|..|++|.+...+ .|+..
T Consensus 218 --------lpliVSG~DDRqVKlWrmnetK---------------------------------------------aWEvD 244 (1202)
T KOG0292|consen 218 --------LPLIVSGADDRQVKLWRMNETK---------------------------------------------AWEVD 244 (1202)
T ss_pred --------cceEEecCCcceeeEEEecccc---------------------------------------------ceeeh
Confidence 3588889999999999976432 23344
Q ss_pred CCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCCCCCCceEE
Q 000470 1346 EPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCI 1388 (1472)
Q Consensus 1346 ~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv 1388 (1472)
...+|...|.++.|+|.. .++|.|+|+.||+||+...+..+++
T Consensus 245 tcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tf 288 (1202)
T KOG0292|consen 245 TCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTF 288 (1202)
T ss_pred hhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeee
Confidence 456788899999999965 7779999999999999887766544
No 432
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.89 E-value=1.2e-21 Score=215.20 Aligned_cols=255 Identities=15% Similarity=0.207 Sum_probs=199.9
Q ss_pred Ccc-cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEE
Q 000470 1043 GWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1121 (1472)
Q Consensus 1043 ~W~-p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~l 1121 (1472)
.|+ .+|.....+.||+++|+++.||.||.++|||.-+|.|+||+..++. ....+......|.-+.|+|.++.|
T Consensus 90 lW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~------~~~~~~~e~~dieWl~WHp~a~il 163 (399)
T KOG0296|consen 90 LWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGG------EQWKLDQEVEDIEWLKWHPRAHIL 163 (399)
T ss_pred EEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCc------eEEEeecccCceEEEEecccccEE
Confidence 588 4688999999999999999999999999999999999999999866 233333344558889999999999
Q ss_pred EEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccc
Q 000470 1122 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW 1201 (1472)
Q Consensus 1122 as~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~ 1201 (1472)
++|+.||++.+|.+... ...+....++..+++=.|.|+ |+.++++..||+|++||+.+++...
T Consensus 164 lAG~~DGsvWmw~ip~~--------------~~~kv~~Gh~~~ct~G~f~pd---GKr~~tgy~dgti~~Wn~ktg~p~~ 226 (399)
T KOG0296|consen 164 LAGSTDGSVWMWQIPSQ--------------ALCKVMSGHNSPCTCGEFIPD---GKRILTGYDDGTIIVWNPKTGQPLH 226 (399)
T ss_pred EeecCCCcEEEEECCCc--------------ceeeEecCCCCCcccccccCC---CceEEEEecCceEEEEecCCCceeE
Confidence 99999999999999731 122333356777788889999 8899999999999999999998776
Q ss_pred eeecCC-------------------------------------------------CccceEEEEEcCCC---CEEEEEeC
Q 000470 1202 TLKAIP-------------------------------------------------EEGYVSSLVTGPCG---NWFVSGSS 1229 (1472)
Q Consensus 1202 ~l~~~~-------------------------------------------------h~g~Itsl~~sp~g---~~LvsGss 1229 (1472)
++.... +...+.|+.+.|.. ...++|+-
T Consensus 227 ~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~v 306 (399)
T KOG0296|consen 227 KITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSV 306 (399)
T ss_pred EecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccc
Confidence 665210 00112233333322 35678888
Q ss_pred CCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCC
Q 000470 1230 RGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDT 1309 (1472)
Q Consensus 1230 dG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~ 1309 (1472)
||+|.+||+......+...+ ..+|.++.| .+. +++++++.+|.|+.||.++|+++.++.
T Consensus 307 dG~i~iyD~a~~~~R~~c~h--e~~V~~l~w-~~t----------~~l~t~c~~g~v~~wDaRtG~l~~~y~-------- 365 (399)
T KOG0296|consen 307 DGTIAIYDLAASTLRHICEH--EDGVTKLKW-LNT----------DYLLTACANGKVRQWDARTGQLKFTYT-------- 365 (399)
T ss_pred cceEEEEecccchhheeccC--CCceEEEEE-cCc----------chheeeccCceEEeeeccccceEEEEe--------
Confidence 99999999887777666554 456888888 442 368999999999999999999988886
Q ss_pred ccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCC
Q 000470 1310 EMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1310 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~ 1380 (1472)
+|..+|.+++.+|++ +++|+|.|++.++|+..
T Consensus 366 ---------------------------------------GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 366 ---------------------------------------GHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred ---------------------------------------cCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 344479999999998 67799999999999864
No 433
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.89 E-value=1e-22 Score=226.39 Aligned_cols=289 Identities=13% Similarity=0.199 Sum_probs=230.1
Q ss_pred eeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEE
Q 000470 1052 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1131 (1472)
Q Consensus 1052 ~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~ 1131 (1472)
..+..|.+.|+.+.|-++...|+||+.|..|++|++.... .....++.+..+.|+++.|.++++++++++.|+.++
T Consensus 169 ~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k----~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r 244 (459)
T KOG0288|consen 169 FVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEK----SELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLR 244 (459)
T ss_pred hhhhccccccceeEEccCcchhhhcchhhhhhhhhcccch----hhhhhhhhccCCCcceeeecCCCceEEeecCCCcee
Confidence 3467799999999999998999999999999999987543 112334556667899999999999999999999999
Q ss_pred EEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccc
Q 000470 1132 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGY 1211 (1472)
Q Consensus 1132 vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~ 1211 (1472)
+|+++.. ..+.....|...|+++.|.-. ...+++|+.|.+|+.||+....|..++-. ...
T Consensus 245 ~Wnvd~~--------------r~~~TLsGHtdkVt~ak~~~~---~~~vVsgs~DRtiK~WDl~k~~C~kt~l~---~S~ 304 (459)
T KOG0288|consen 245 LWNVDSL--------------RLRHTLSGHTDKVTAAKFKLS---HSRVVSGSADRTIKLWDLQKAYCSKTVLP---GSQ 304 (459)
T ss_pred eeeccch--------------hhhhhhcccccceeeehhhcc---ccceeeccccchhhhhhhhhhheeccccc---ccc
Confidence 9999831 112222346777888888765 23599999999999999999888776543 345
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEc
Q 000470 1212 VSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNA 1291 (1472)
Q Consensus 1212 Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl 1291 (1472)
+..++.. +..+++|-.|+.|++||.|...+..+...+ +.|+++.. .+++ ..+.+.+-|+.+.+.|+
T Consensus 305 cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g--g~vtSl~l-s~~g---------~~lLsssRDdtl~viDl 370 (459)
T KOG0288|consen 305 CNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLG--GRVTSLDL-SMDG---------LELLSSSRDDTLKVIDL 370 (459)
T ss_pred ccceEec--ceeeeecccccceEEEeccCCceeeEeecC--cceeeEee-ccCC---------eEEeeecCCCceeeeec
Confidence 6666665 567899999999999999999888876653 47888887 5544 36788888999999999
Q ss_pred CCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccC
Q 000470 1292 ENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGT 1370 (1472)
Q Consensus 1292 ~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~ 1370 (1472)
++.+.+++++..... .++ -.+.+.|+|++ ++++||.
T Consensus 371 Rt~eI~~~~sA~g~k-----------------------------------------~as--DwtrvvfSpd~~YvaAGS~ 407 (459)
T KOG0288|consen 371 RTKEIRQTFSAEGFK-----------------------------------------CAS--DWTRVVFSPDGSYVAAGSA 407 (459)
T ss_pred ccccEEEEeeccccc-----------------------------------------ccc--ccceeEECCCCceeeeccC
Confidence 999998888754331 112 26788899999 6779999
Q ss_pred CCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCcc-ceeEE
Q 000470 1371 DLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRD-SILSL 1449 (1472)
Q Consensus 1371 Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d-~I~~v 1449 (1472)
||.|++|++.+++.-.+++++ |.+ .|+++
T Consensus 408 dgsv~iW~v~tgKlE~~l~~s--------------------------------------------------~s~~aI~s~ 437 (459)
T KOG0288|consen 408 DGSVYIWSVFTGKLEKVLSLS--------------------------------------------------TSNAAITSL 437 (459)
T ss_pred CCcEEEEEccCceEEEEeccC--------------------------------------------------CCCcceEEE
Confidence 999999999998887766653 223 79999
Q ss_pred eeeecCCcEEEEEcCCceEEEcC
Q 000470 1450 GSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1450 a~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+ |++.|..|+++|+++.+.+|.
T Consensus 438 ~-W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 438 S-WNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred E-EcCCCchhhcccCCcceEecC
Confidence 5 999999999999999999995
No 434
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.89 E-value=2e-23 Score=241.38 Aligned_cols=199 Identities=15% Similarity=0.114 Sum_probs=158.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|+||||+.+.+++..++.+++|+|||+ |+|.+++... +.+.......|+.||+.|++||.+.++|||||.+.|+|++
T Consensus 592 LkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~ 671 (807)
T KOG1094|consen 592 LKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVD 671 (807)
T ss_pred cCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeec
Confidence 689999999999999999999999999 9999999886 4445666778999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh--
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-- 155 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-- 155 (1472)
.++++||+|||+++..+... +-..-....-...|||||.+. .++++.++|+|++|+++||+++
T Consensus 672 ~e~~iKiadfgmsR~lysg~-----yy~vqgr~vlpiRwmawEsil----------lgkFttaSDvWafgvTlwE~~~~C 736 (807)
T KOG1094|consen 672 GEFTIKIADFGMSRNLYSGD-----YYRVQGRAVLPIRWMAWESIL----------LGKFTTASDVWAFGVTLWEVFMLC 736 (807)
T ss_pred CcccEEecCcccccccccCC-----ceeeecceeeeeeehhHHHHH----------hccccchhhhhhhHHHHHHHHHHH
Confidence 99999999999998765432 111112222356799999876 4578999999999999999976
Q ss_pred CCCCCCchHHH---HHHhcCCC-----CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 156 EVPFFELSHLL---AYRRGQYD-----PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 156 g~~pf~~~~~~---~~~~~~~~-----~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.+.||..-.-. +....... .....|..++..+.+|+.+||.+|-++||+++++..++..
T Consensus 737 ~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 737 REQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred hhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 36777532222 21111111 1223566788899999999999999999999999887543
No 435
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.89 E-value=7.3e-23 Score=231.27 Aligned_cols=193 Identities=26% Similarity=0.297 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++|+||+++++++..+...++++||+++ +|.+++.....++...+..++.|++.++.+||+.||+|+||+|.||+++.+
T Consensus 44 l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~ 123 (244)
T smart00220 44 LKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDED 123 (244)
T ss_pred CCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCC
Confidence 4799999999999999999999999995 999999876668999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+....... ......++..|++||.+. ...++.++||||+|+++++|++|.+|
T Consensus 124 ~~~~l~d~~~~~~~~~~~--------~~~~~~~~~~~~~pE~~~----------~~~~~~~~Di~slG~~l~~l~~~~~p 185 (244)
T smart00220 124 GHVKLADFGLARQLDPGG--------LLTTFVGTPEYMAPEVLL----------GKGYGKAVDVWSLGVILYELLTGKPP 185 (244)
T ss_pred CcEEEccccceeeecccc--------ccccccCCcCCCCHHHHc----------cCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999999887653221 122344677899999764 33567899999999999999999888
Q ss_pred CCc-hHHHHHHhcCCCCCc---ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FEL-SHLLAYRRGQYDPSQ---HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~-~~~~~~~~~~~~~~~---~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.. ............... ......+..+.+++.+||..+|++||++.++++|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 186 FPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred CCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhC
Confidence 865 333222221111111 1111155789999999999999999999999987
No 436
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=1e-24 Score=230.68 Aligned_cols=196 Identities=26% Similarity=0.344 Sum_probs=153.0
Q ss_pred CCCCCcceeeEEEEeCC-----eEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDK-----AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~-----~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
.+|.||+...++.+-.. .+|+++|.|..+|...|-....|+...++.+++||++||+|||+.||.||||||.|+|
T Consensus 109 FkHdNVLSaLDILQPph~dfFqEiYV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLL 188 (449)
T KOG0664|consen 109 FRHDNVLSLLDILQPANPSFFQELYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLL 188 (449)
T ss_pred hccccHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEE
Confidence 37999999988886653 5799999999999999988888999999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++++..+||||||+++.....+ ...+....-|-.|.|||++++. ..|+.+.||||.|||+.||+.
T Consensus 189 VNSNCvLKICDFGLARvee~d~------~~hMTqEVVTQYYRAPEiLMGa---------RhYs~AvDiWSVGCIFaELLg 253 (449)
T KOG0664|consen 189 VNSNCILKICDFGLARTWDQRD------RLNMTHEVVTQYYRAPELLMGA---------RRYTGAVDIWSVGCIFAELLQ 253 (449)
T ss_pred eccCceEEecccccccccchhh------hhhhHHHHHHHHhccHHHhhcc---------hhhcCccceehhhHHHHHHHh
Confidence 9999999999999998653221 1122333447789999998743 478999999999999999998
Q ss_pred CCCCCCchH----H------------HHH------------HhcCCCCC-cccCCC-----CCHHHHHHHHHhcccCcCC
Q 000470 156 EVPFFELSH----L------------LAY------------RRGQYDPS-QHLEKI-----PDSGIRKMILHMIQLEPEL 201 (1472)
Q Consensus 156 g~~pf~~~~----~------------~~~------------~~~~~~~~-~~l~~~-----~~~~l~~LI~~mL~~dP~~ 201 (1472)
.+..|.... + +.+ +.+...+. +.+-.+ ...+...++.+||..||++
T Consensus 254 RrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dk 333 (449)
T KOG0664|consen 254 RKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDK 333 (449)
T ss_pred hhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcc
Confidence 888885321 1 111 11111111 111111 2246778999999999999
Q ss_pred CCCHHHHHHH
Q 000470 202 RFSAESYLQN 211 (1472)
Q Consensus 202 Rpsa~elL~~ 211 (1472)
|.+.++++.|
T Consensus 334 ris~~~A~~~ 343 (449)
T KOG0664|consen 334 RISVEEALQH 343 (449)
T ss_pred cccHhhhccc
Confidence 9999999988
No 437
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.89 E-value=9e-22 Score=216.94 Aligned_cols=275 Identities=19% Similarity=0.224 Sum_probs=209.1
Q ss_pred CCCCcccccceeeeccccccceeEEEEcCCC---CEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEec
Q 000470 1040 PDSGWRPRGILVAHLQEHCSAVNEIAISHDH---SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR 1116 (1472)
Q Consensus 1040 ~~~~W~p~G~lV~~l~~H~~~V~~lafspd~---~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~ 1116 (1472)
....|+..|+....+.||.++|.++++.-.. ..|+|||.|.++++|-+..++..... .....+|...|-++...+
T Consensus 126 ~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~--~~~~~GHk~~V~sVsv~~ 203 (423)
T KOG0313|consen 126 TSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKA--LKVCRGHKRSVDSVSVDS 203 (423)
T ss_pred eeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhH--HhHhcccccceeEEEecC
Confidence 4467999999999999999999998874322 36999999999999999877643322 222338999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcccccc-CC----------CccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeC
Q 000470 1117 HSAQVVVGACDGIIHMFSVDHISR-GL----------GNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQ 1185 (1472)
Q Consensus 1117 ~~~~las~s~DG~I~vwdv~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~ 1185 (1472)
++..|++|+.|.+|.+|+...... .. ....+..+..........|..+|..+.|++. ..++++++
T Consensus 204 sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~----~v~yS~Sw 279 (423)
T KOG0313|consen 204 SGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDA----TVIYSVSW 279 (423)
T ss_pred CCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCC----CceEeecc
Confidence 999999999999999999431100 00 0001111111122233456778888888874 28999999
Q ss_pred CCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcc--cceEeccccCCceeEEeecC
Q 000470 1186 NCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVP--VNSWQYSQVCPIEKMCLFVP 1263 (1472)
Q Consensus 1186 dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~--i~s~~~~~~~~I~~l~~~~p 1263 (1472)
|.+|+.||+.++++..++.. ...++|+.++|..+.|++|++|..++|||.|.+.- +..--.+|...|..+.+ +|
T Consensus 280 DHTIk~WDletg~~~~~~~~---~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkw-sp 355 (423)
T KOG0313|consen 280 DHTIKVWDLETGGLKSTLTT---NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKW-SP 355 (423)
T ss_pred cceEEEEEeecccceeeeec---CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheec-CC
Confidence 99999999999999988875 56799999999999999999999999999997632 22222246678889888 77
Q ss_pred CCCCccccCCCCEEEEEEcCCeEEEEEcCCCe-EEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccccccccc
Q 000470 1264 PPNAAVSTTARPLIYVAAGCNEVSLWNAENGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVD 1342 (1472)
Q Consensus 1264 ~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 1342 (1472)
... ..+++++.||.+++||+++.+ .+..+.
T Consensus 356 ~~~--------~~~~S~S~D~t~klWDvRS~k~plydI~----------------------------------------- 386 (423)
T KOG0313|consen 356 TNE--------FQLVSGSYDNTVKLWDVRSTKAPLYDIA----------------------------------------- 386 (423)
T ss_pred CCc--------eEEEEEecCCeEEEEEeccCCCcceeec-----------------------------------------
Confidence 643 478899999999999998754 333332
Q ss_pred ccCCCCCCcCCceEeccCCCCcEEEccCCCeEEEEeC
Q 000470 1343 ELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDH 1379 (1472)
Q Consensus 1343 ~l~~~~~~~~~V~sl~~~p~g~llTgg~Dg~IrlWDl 1379 (1472)
+|.-.|-++.|...+.++|||.|++||++.-
T Consensus 387 ------~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 387 ------GHNDKVLSVDWNEGGLIVSGGADNKLRIFKG 417 (423)
T ss_pred ------cCCceEEEEeccCCceEEeccCcceEEEecc
Confidence 2333689999988779999999999999864
No 438
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=1.5e-21 Score=258.79 Aligned_cols=278 Identities=14% Similarity=0.158 Sum_probs=202.4
Q ss_pred CCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeec
Q 000470 1079 DSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKD 1158 (1472)
Q Consensus 1079 DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1472)
+|-+++|+..+.......+ ......|.+.|.+++|+++++.+|+|+.||.|+||+...... .+....+ ....
T Consensus 457 ~gl~~~~~~~~~~~~~~~~-~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~-~~~~~~~----~~~~-- 528 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLK-QGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIK-DGRDIHY----PVVE-- 528 (793)
T ss_pred hhhhhhhcccceEEEEeec-cccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccc-ccccccc----ceEE--
Confidence 5778888887654221111 112344778899999999999999999999999999863110 0000000 0111
Q ss_pred CCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcC-CCCEEEEEeCCCcEEEEE
Q 000470 1159 TKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGP-CGNWFVSGSSRGVLTLWD 1237 (1472)
Q Consensus 1159 ~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp-~g~~LvsGssdG~I~lWD 1237 (1472)
......+..++|++.. +..|++++.||.|++||+.+++.+..+.. |.+.|++++|+| ++.+|++|+.||.|++||
T Consensus 529 ~~~~~~v~~l~~~~~~--~~~las~~~Dg~v~lWd~~~~~~~~~~~~--H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd 604 (793)
T PLN00181 529 LASRSKLSGICWNSYI--KSQVASSNFEGVVQVWDVARSQLVTEMKE--HEKRVWSIDYSSADPTLLASGSDDGSVKLWS 604 (793)
T ss_pred ecccCceeeEEeccCC--CCEEEEEeCCCeEEEEECCCCeEEEEecC--CCCCEEEEEEcCCCCCEEEEEcCCCEEEEEE
Confidence 1223456777888753 45899999999999999999888877765 889999999997 789999999999999999
Q ss_pred CCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeE-EEEEecccCCCCCccCCCcc
Q 000470 1238 LRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSC-HQVLRTANYDGDTEMSDLPW 1316 (1472)
Q Consensus 1238 lr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~-~~~l~~~~~~~~~~~~~~~~ 1316 (1472)
++.+..+..+.. ...+.++.| .+. ++.++++|+.|+.|.+||++++.. ...+
T Consensus 605 ~~~~~~~~~~~~--~~~v~~v~~-~~~--------~g~~latgs~dg~I~iwD~~~~~~~~~~~---------------- 657 (793)
T PLN00181 605 INQGVSIGTIKT--KANICCVQF-PSE--------SGRSLAFGSADHKVYYYDLRNPKLPLCTM---------------- 657 (793)
T ss_pred CCCCcEEEEEec--CCCeEEEEE-eCC--------CCCEEEEEeCCCeEEEEECCCCCccceEe----------------
Confidence 999888877764 346777777 332 245899999999999999986542 2221
Q ss_pred cccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCCcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCC
Q 000470 1317 AFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGV 1396 (1472)
Q Consensus 1317 ~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~ 1396 (1472)
.+|...|.++.|.+++.++||+.|+.|++||+..+.. +.. .
T Consensus 658 -------------------------------~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~-----~~~--~- 698 (793)
T PLN00181 658 -------------------------------IGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSIS-----GIN--E- 698 (793)
T ss_pred -------------------------------cCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCcc-----ccC--C-
Confidence 1344478899997666899999999999999875321 000 0
Q ss_pred CCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1397 GNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1397 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
. ....+.+|...|+.++ +++++.+|++|+.||.|+||+
T Consensus 699 --~-----------------------------------~l~~~~gh~~~i~~v~-~s~~~~~lasgs~D~~v~iw~ 736 (793)
T PLN00181 699 --T-----------------------------------PLHSFMGHTNVKNFVG-LSVSDGYIATGSETNEVFVYH 736 (793)
T ss_pred --c-----------------------------------ceEEEcCCCCCeeEEE-EcCCCCEEEEEeCCCEEEEEE
Confidence 0 0011235888999995 899999999999999999995
No 439
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.89 E-value=1.2e-22 Score=211.90 Aligned_cols=261 Identities=17% Similarity=0.248 Sum_probs=203.3
Q ss_pred CCCCcc-cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCC
Q 000470 1040 PDSGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1040 ~~~~W~-p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~ 1118 (1472)
.|.+.+ .+|..|.+|.||+++|++.....+...-|||+.|=+.||||.-++... .++ .|..-|.+++|+.++
T Consensus 40 ~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdel------hsf-~hkhivk~~af~~ds 112 (334)
T KOG0278|consen 40 KPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDEL------HSF-EHKHIVKAVAFSQDS 112 (334)
T ss_pred CchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhh------hhh-hhhheeeeEEecccc
Confidence 344444 468899999999999999999888889999999999999999887632 222 355568999999999
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
+.|++|+.+..+||||++.... +...+..+.+.+-..+.++.+ +.+++++.|++|++||.|+|.
T Consensus 113 ~~lltgg~ekllrvfdln~p~A------------pp~E~~ghtg~Ir~v~wc~eD----~~iLSSadd~tVRLWD~rTgt 176 (334)
T KOG0278|consen 113 NYLLTGGQEKLLRVFDLNRPKA------------PPKEISGHTGGIRTVLWCHED----KCILSSADDKTVRLWDHRTGT 176 (334)
T ss_pred hhhhccchHHHhhhhhccCCCC------------CchhhcCCCCcceeEEEeccC----ceEEeeccCCceEEEEeccCc
Confidence 9999999999999999973211 122233344555455544444 467777999999999999999
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEE
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1278 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~ 1278 (1472)
.+.++.. ...|+++.++++|++|.++ ..+.|..||......++++..|. .|.+..+ +|... .++
T Consensus 177 ~v~sL~~---~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P~--nV~SASL-~P~k~---------~fV 240 (334)
T KOG0278|consen 177 EVQSLEF---NSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMPC--NVESASL-HPKKE---------FFV 240 (334)
T ss_pred EEEEEec---CCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCcc--ccccccc-cCCCc---------eEE
Confidence 9999986 5679999999999887665 45679999999999999888754 4666666 77654 567
Q ss_pred EEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEec
Q 000470 1279 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1358 (1472)
Q Consensus 1279 vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1358 (1472)
+|+.|..+..||..+|.-+..+. .+|..+|.|+.
T Consensus 241 aGged~~~~kfDy~TgeEi~~~n----------------------------------------------kgh~gpVhcVr 274 (334)
T KOG0278|consen 241 AGGEDFKVYKFDYNTGEEIGSYN----------------------------------------------KGHFGPVHCVR 274 (334)
T ss_pred ecCcceEEEEEeccCCceeeecc----------------------------------------------cCCCCceEEEE
Confidence 77778999999999987654431 35666899999
Q ss_pred cCCCC-cEEEccCCCeEEEEeCCCCCCc
Q 000470 1359 PLPGG-DLLTGGTDLKIRRWDHCSPGRS 1385 (1472)
Q Consensus 1359 ~~p~g-~llTgg~Dg~IrlWDl~~~~~s 1385 (1472)
|+|+| ..++|++||+||+|-+.-++..
T Consensus 275 FSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 275 FSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred ECCCCceeeccCCCceEEEEEecCCCch
Confidence 99999 5669999999999998655443
No 440
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.89 E-value=1.5e-21 Score=240.36 Aligned_cols=287 Identities=19% Similarity=0.279 Sum_probs=228.2
Q ss_pred CCcccccce-eeeccc-cccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceE-EeccCCceEEEEEecCC
Q 000470 1042 SGWRPRGIL-VAHLQE-HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLT-YHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1042 ~~W~p~G~l-V~~l~~-H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t-~~~~~~~I~~v~f~~~~ 1118 (1472)
..|++.... ...+.+ |...|++..|. ..++++++.|+++++||...+. ...+ +.+|.+.|.+++|...+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~------~i~~~l~GH~g~V~~l~~~~~~ 261 (537)
T KOG0274|consen 190 KNWRKLFRRGYKVLLGTDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGY------LILTRLVGHFGGVWGLAFPSGG 261 (537)
T ss_pred ccccccccccceeecccCcchhhhheee--cCeEEecCCCceeEEeecccce------EEEeeccCCCCCceeEEEecCC
Confidence 456644332 233444 45678888887 5689999999999999998765 3334 78999999999999989
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
+.+++|+.|.+++|||..+ | .+......|...+.++...+. .+++|+.|.+|++||+.++.
T Consensus 262 ~~lvsgS~D~t~rvWd~~s-----g---------~C~~~l~gh~stv~~~~~~~~-----~~~sgs~D~tVkVW~v~n~~ 322 (537)
T KOG0274|consen 262 DKLVSGSTDKTERVWDCST-----G---------ECTHSLQGHTSSVRCLTIDPF-----LLVSGSRDNTVKVWDVTNGA 322 (537)
T ss_pred CEEEEEecCCcEEeEecCC-----C---------cEEEEecCCCceEEEEEccCc-----eEeeccCCceEEEEeccCcc
Confidence 9999999999999999763 1 222333356677777766554 88889999999999999999
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEE
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1278 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~ 1278 (1472)
++.++.+ |.+.|+++.++ +..+++|+.||+|++||.+.+++++++.. |..+|.++.+ .+. ..++
T Consensus 323 ~l~l~~~--h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~g-H~~~V~sl~~-~~~----------~~~~ 386 (537)
T KOG0274|consen 323 CLNLLRG--HTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSG-HTGRVYSLIV-DSE----------NRLL 386 (537)
T ss_pred eEEEecc--ccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecC-CcceEEEEEe-cCc----------ceEE
Confidence 9998887 89999999998 88999999999999999999999999987 8889999866 321 3789
Q ss_pred EEEcCCeEEEEEcCCC-eEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEe
Q 000470 1279 VAAGCNEVSLWNAENG-SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1357 (1472)
Q Consensus 1279 vas~dg~V~VWDl~t~-~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl 1357 (1472)
.|+.|+.|++||++++ +|..++..+.. .|.++
T Consensus 387 Sgs~D~~IkvWdl~~~~~c~~tl~~h~~-----------------------------------------------~v~~l 419 (537)
T KOG0274|consen 387 SGSLDTTIKVWDLRTKRKCIHTLQGHTS-----------------------------------------------LVSSL 419 (537)
T ss_pred eeeeccceEeecCCchhhhhhhhcCCcc-----------------------------------------------ccccc
Confidence 9999999999999999 88887763221 23333
Q ss_pred ccCCCCcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcC
Q 000470 1358 LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATD 1437 (1472)
Q Consensus 1358 ~~~p~g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 1437 (1472)
.+ .+..|++++.|+.|++||..+++..+++.++
T Consensus 420 ~~-~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~---------------------------------------------- 452 (537)
T KOG0274|consen 420 LL-RDNFLVSSSADGTIKLWDAEEGECLRTLEGR---------------------------------------------- 452 (537)
T ss_pred cc-ccceeEeccccccEEEeecccCceeeeeccC----------------------------------------------
Confidence 33 2447889999999999999998887766542
Q ss_pred CCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1438 SAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1438 ~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
|...|++++ +. ...++++++||.+++|+
T Consensus 453 ----~~~~v~~l~-~~--~~~il~s~~~~~~~l~d 480 (537)
T KOG0274|consen 453 ----HVGGVSALA-LG--KEEILCSSDDGSVKLWD 480 (537)
T ss_pred ----CcccEEEee-cC--cceEEEEecCCeeEEEe
Confidence 556777775 22 57899999999999996
No 441
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.89 E-value=9.9e-22 Score=223.40 Aligned_cols=276 Identities=20% Similarity=0.314 Sum_probs=206.9
Q ss_pred ccceeEEEEcCCCC--EEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q 000470 1058 CSAVNEIAISHDHS--FFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSV 1135 (1472)
Q Consensus 1058 ~~~V~~lafspd~~--~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv 1135 (1472)
.++|++++|||... +.+|+|. .|.|++..+.+. ..++..-...+.+++|..+|..+|+|...|.|+|||.
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~S~--rvqly~~~~~~~------~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~ 97 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTSSV--RVQLYSSVTRSV------RKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDM 97 (487)
T ss_pred cCcceeEecCCCCCCceEEeccc--EEEEEecchhhh------hhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecc
Confidence 46799999999654 5555554 699999887552 2222222345999999999999999999999999996
Q ss_pred cccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEE
Q 000470 1136 DHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSL 1215 (1472)
Q Consensus 1136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl 1215 (1472)
.+ ..+......|..++....|+|.. +.++++|+.|+.+++||+.+......+. .|.+.|.|.
T Consensus 98 k~--------------r~iLR~~~ah~apv~~~~f~~~d--~t~l~s~sDd~v~k~~d~s~a~v~~~l~--~htDYVR~g 159 (487)
T KOG0310|consen 98 KS--------------RVILRQLYAHQAPVHVTKFSPQD--NTMLVSGSDDKVVKYWDLSTAYVQAELS--GHTDYVRCG 159 (487)
T ss_pred cc--------------HHHHHHHhhccCceeEEEecccC--CeEEEecCCCceEEEEEcCCcEEEEEec--CCcceeEee
Confidence 42 01222233577889999999985 5689999999999999999887533444 599999999
Q ss_pred EEcCC-CCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCC
Q 000470 1216 VTGPC-GNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENG 1294 (1472)
Q Consensus 1216 ~~sp~-g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~ 1294 (1472)
+|+|. ++.+++|+.||.|++||+|... -......|..||..+++ .|.+. .|+ .++.+.|+|||+-+|
T Consensus 160 ~~~~~~~hivvtGsYDg~vrl~DtR~~~-~~v~elnhg~pVe~vl~-lpsgs---------~ia-sAgGn~vkVWDl~~G 227 (487)
T KOG0310|consen 160 DISPANDHIVVTGSYDGKVRLWDTRSLT-SRVVELNHGCPVESVLA-LPSGS---------LIA-SAGGNSVKVWDLTTG 227 (487)
T ss_pred ccccCCCeEEEecCCCceEEEEEeccCC-ceeEEecCCCceeeEEE-cCCCC---------EEE-EcCCCeEEEEEecCC
Confidence 99994 5689999999999999999884 33444556779999999 77654 444 445667999999866
Q ss_pred eEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCe
Q 000470 1295 SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLK 1373 (1472)
Q Consensus 1295 ~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~ 1373 (1472)
...-.. ...|...|+|+.+..++ .|+|||-||.
T Consensus 228 ~qll~~----------------------------------------------~~~H~KtVTcL~l~s~~~rLlS~sLD~~ 261 (487)
T KOG0310|consen 228 GQLLTS----------------------------------------------MFNHNKTVTCLRLASDSTRLLSGSLDRH 261 (487)
T ss_pred ceehhh----------------------------------------------hhcccceEEEEEeecCCceEeecccccc
Confidence 321111 12355689999998777 8999999999
Q ss_pred EEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeee
Q 000470 1374 IRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK 1453 (1472)
Q Consensus 1374 IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~ 1453 (1472)
|++||+.+-+ ++.+-. -.++|.+++ ++
T Consensus 262 VKVfd~t~~K---vv~s~~-------------------------------------------------~~~pvLsia-vs 288 (487)
T KOG0310|consen 262 VKVFDTTNYK---VVHSWK-------------------------------------------------YPGPVLSIA-VS 288 (487)
T ss_pred eEEEEccceE---EEEeee-------------------------------------------------cccceeeEE-ec
Confidence 9999965432 222211 346899996 78
Q ss_pred cCCcEEEEEcCCceEEE
Q 000470 1454 LNQRLLISSSRDGAIKV 1470 (1472)
Q Consensus 1454 ~~~~~LvS~s~DG~IkV 1470 (1472)
+++..++.|-.||.+-+
T Consensus 289 ~dd~t~viGmsnGlv~~ 305 (487)
T KOG0310|consen 289 PDDQTVVIGMSNGLVSI 305 (487)
T ss_pred CCCceEEEecccceeee
Confidence 88889999999998754
No 442
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.89 E-value=2.8e-21 Score=203.63 Aligned_cols=284 Identities=19% Similarity=0.236 Sum_probs=225.0
Q ss_pred eeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEec-CCCEEEEEeCCCcE
Q 000470 1052 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR-HSAQVVVGACDGII 1130 (1472)
Q Consensus 1052 ~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~-~~~~las~s~DG~I 1130 (1472)
+.+++|.+.|.+|+|+.+|..+++||.|++|++|++.... ......+.+|++.|-.++|.| +.+.|++++.|.+|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r----~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~i 89 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDR----FRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTI 89 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchh----hhhhhcccCCCcchhhheeCCCCCcceEEecCCceE
Confidence 5678999999999999999999999999999999998763 334567788998899999987 68899999999999
Q ss_pred EEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCcc
Q 000470 1131 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1210 (1472)
Q Consensus 1131 ~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g 1210 (1472)
++||++..+ ++...... +.-+. +.|+|+ +++++++..|..|...|.|+.+.....+. .-
T Consensus 90 r~wd~r~~k-------------~~~~i~~~-~eni~-i~wsp~---g~~~~~~~kdD~it~id~r~~~~~~~~~~---~~ 148 (313)
T KOG1407|consen 90 RIWDIRSGK-------------CTARIETK-GENIN-ITWSPD---GEYIAVGNKDDRITFIDARTYKIVNEEQF---KF 148 (313)
T ss_pred EEEEeccCc-------------EEEEeecc-CcceE-EEEcCC---CCEEEEecCcccEEEEEecccceeehhcc---cc
Confidence 999998411 12222222 22233 358888 78999999999999999999887766554 34
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEE
Q 000470 1211 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1290 (1472)
Q Consensus 1211 ~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWD 1290 (1472)
.++-++|+-+++.++..+.-|+|.+-.....+++.+++. |.....++.| .|. |+++++|+.|..+.+||
T Consensus 149 e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~A-H~snCicI~f-~p~---------GryfA~GsADAlvSLWD 217 (313)
T KOG1407|consen 149 EVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKA-HPSNCICIEF-DPD---------GRYFATGSADALVSLWD 217 (313)
T ss_pred eeeeeeecCCCCEEEEecCCceEEEEecccccccccccc-CCcceEEEEE-CCC---------CceEeeccccceeeccC
Confidence 577889998888888878889999999888888888875 4444444555 554 56999999999999999
Q ss_pred cCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEcc
Q 000470 1291 AENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGG 1369 (1472)
Q Consensus 1291 l~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg 1369 (1472)
++..-|.+.+.... -+|+.+.|+.+| .|++|+
T Consensus 218 ~~ELiC~R~isRld-----------------------------------------------wpVRTlSFS~dg~~lASaS 250 (313)
T KOG1407|consen 218 VDELICERCISRLD-----------------------------------------------WPVRTLSFSHDGRMLASAS 250 (313)
T ss_pred hhHhhhheeecccc-----------------------------------------------CceEEEEeccCcceeeccC
Confidence 99998888875222 279999999999 566999
Q ss_pred CCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEE
Q 000470 1370 TDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSL 1449 (1472)
Q Consensus 1370 ~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~v 1449 (1472)
+|.-|-+=+++++.+..-+. |.++-..|
T Consensus 251 EDh~IDIA~vetGd~~~eI~----------------------------------------------------~~~~t~tV 278 (313)
T KOG1407|consen 251 EDHFIDIAEVETGDRVWEIP----------------------------------------------------CEGPTFTV 278 (313)
T ss_pred ccceEEeEecccCCeEEEee----------------------------------------------------ccCCceeE
Confidence 99999999998887654332 56667788
Q ss_pred eeeecCCcEEEEEcCC---------ceEEEc
Q 000470 1450 GSVKLNQRLLISSSRD---------GAIKVW 1471 (1472)
Q Consensus 1450 a~~~~~~~~LvS~s~D---------G~IkVW 1471 (1472)
| |+|...+|+-+..| |+||+|
T Consensus 279 A-WHPk~~LLAyA~ddk~~d~~reag~vKiF 308 (313)
T KOG1407|consen 279 A-WHPKRPLLAYACDDKDGDSNREAGTVKIF 308 (313)
T ss_pred E-ecCCCceeeEEecCCCCccccccceeEEe
Confidence 6 99999998877654 688876
No 443
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.89 E-value=5.5e-23 Score=249.25 Aligned_cols=199 Identities=19% Similarity=0.117 Sum_probs=163.6
Q ss_pred CCCCCcceeeEEEEe-----CCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000470 1 MSSTPCVHKKFWQET-----DKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~-----~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpe 72 (1472)
..|||++.||++|.. ++.+|||||||. |+.-|+++. ...+.|+.+..|++.++.|+.+||...++|||||-.
T Consensus 73 ~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~ 152 (953)
T KOG0587|consen 73 SHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQ 152 (953)
T ss_pred cCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCc
Confidence 369999999999854 358999999999 799998875 456899999999999999999999999999999999
Q ss_pred CEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHH
Q 000470 73 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 152 (1472)
Q Consensus 73 NILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~e 152 (1472)
|||++.++.|||+|||.+....... .-..|+.||++|||||++.+.. .....|+..+|+||||++..|
T Consensus 153 NiLLT~e~~VKLvDFGvSaQldsT~-------grRnT~iGtP~WMAPEViac~e-----~~d~tyd~R~D~WsLGITaIE 220 (953)
T KOG0587|consen 153 NVLLTENAEVKLVDFGVSAQLDSTV-------GRRNTFIGTPYWMAPEVIACDE-----SPDATYDYRSDLWSLGITAIE 220 (953)
T ss_pred eEEEeccCcEEEeeeeeeeeeeccc-------ccccCcCCCcccccceeeeccc-----CCCCCcccccchhhccceeeh
Confidence 9999999999999999876553221 1235778999999999997442 346678999999999999999
Q ss_pred HHhCCCCCC-chHHHHHHhcCCCCCccc--CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 153 LFLEVPFFE-LSHLLAYRRGQYDPSQHL--EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 153 Lltg~~pf~-~~~~~~~~~~~~~~~~~l--~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.-|.||+- ......+......|++.+ ++..++.+.++|..||.+|-++||+..++|+|
T Consensus 221 ladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 221 MAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred hcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 999977764 444444444444444433 34557889999999999999999999999988
No 444
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.88 E-value=1.4e-21 Score=209.80 Aligned_cols=249 Identities=18% Similarity=0.233 Sum_probs=194.4
Q ss_pred cceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCc
Q 000470 1098 SRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCAS 1177 (1472)
Q Consensus 1098 ~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~ 1177 (1472)
+.....+|.+.|..+.|+|+|.+||+||.|..|.+|++. +..+.+..+ ..|...|..++|.++ +
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~------gdceN~~~l-------kgHsgAVM~l~~~~d---~ 102 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVY------GDCENFWVL-------KGHSGAVMELHGMRD---G 102 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEecc------ccccceeee-------ccccceeEeeeeccC---C
Confidence 344567889999999999999999999999999999986 222222221 256777888899999 6
Q ss_pred eEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCC-CEEEEEeCCCcEEEEECCCCcccceEeccccCCce
Q 000470 1178 HMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCG-NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIE 1256 (1472)
Q Consensus 1178 ~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g-~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~ 1256 (1472)
+.+++++.|.+|++||+++|++++.++. |.+.+++++...-| ..+.+|+.||+++|||+|.+.+++.+.. ...++
T Consensus 103 s~i~S~gtDk~v~~wD~~tG~~~rk~k~--h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~--kyqlt 178 (338)
T KOG0265|consen 103 SHILSCGTDKTVRGWDAETGKRIRKHKG--HTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN--KYQLT 178 (338)
T ss_pred CEEEEecCCceEEEEecccceeeehhcc--ccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcccc--ceeEE
Confidence 7999999999999999999999998887 89999999855555 4667899999999999999999988753 33577
Q ss_pred eEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccc
Q 000470 1257 KMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVN 1336 (1472)
Q Consensus 1257 ~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 1336 (1472)
.+.| ... +..+++|+-|+.|++||++..++..+++.+
T Consensus 179 Av~f-~d~---------s~qv~sggIdn~ikvWd~r~~d~~~~lsGh--------------------------------- 215 (338)
T KOG0265|consen 179 AVGF-KDT---------SDQVISGGIDNDIKVWDLRKNDGLYTLSGH--------------------------------- 215 (338)
T ss_pred EEEe-ccc---------ccceeeccccCceeeeccccCcceEEeecc---------------------------------
Confidence 7777 322 336899999999999999999988887633
Q ss_pred ccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCCCCCC----ceEEeCCCCCCCCCCcceEEeecCceE
Q 000470 1337 QKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGR----SYCICGPNLKGVGNDEFYETRSSSGVQ 1411 (1472)
Q Consensus 1337 ~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~----s~vv~g~~~~~~~~~~~~~~~~~~~~~ 1411 (1472)
.-.|+.+..++.| ++++-+.|.++|+||++---. ..+..|.
T Consensus 216 --------------~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~-------------------- 261 (338)
T KOG0265|consen 216 --------------ADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGH-------------------- 261 (338)
T ss_pred --------------cCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecc--------------------
Confidence 2368899999988 788999999999999863211 1111111
Q ss_pred EEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEe-eeecCCcEEEEEcCCceEEEcC
Q 000470 1412 VVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLG-SVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1412 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va-~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
-|.-.++-+. .|++++..+..|+.|..+.||+
T Consensus 262 -----------------------------~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd 294 (338)
T KOG0265|consen 262 -----------------------------IHNFEKNLLKCSWSPNGTKITAGSADRFVYVWD 294 (338)
T ss_pred -----------------------------hhhhhhhcceeeccCCCCccccccccceEEEee
Confidence 0333333321 3788999999999999999996
No 445
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.88 E-value=4.3e-24 Score=243.60 Aligned_cols=189 Identities=28% Similarity=0.404 Sum_probs=148.4
Q ss_pred CCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC-
Q 000470 4 TPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPP---FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW- 79 (1472)
Q Consensus 4 pNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~---~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~- 79 (1472)
.||++|+..|...+++|||+|-+.-+|.+.|++-+ .|....++.++.||+-||..|-..||+|.||||+||||+..
T Consensus 494 ~Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k 573 (752)
T KOG0670|consen 494 FHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESK 573 (752)
T ss_pred hHHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCc
Confidence 58999999999999999999999999999998743 48889999999999999999999999999999999999865
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||||||.|...... +.+-|+ -+..|.|||+++ +.+|+...|+||+||+||||+||+..
T Consensus 574 ~iLKLCDfGSA~~~~en-----eitPYL----VSRFYRaPEIiL----------G~~yd~~iD~WSvgctLYElYtGkIl 634 (752)
T KOG0670|consen 574 NILKLCDFGSASFASEN-----EITPYL----VSRFYRAPEIIL----------GLPYDYPIDTWSVGCTLYELYTGKIL 634 (752)
T ss_pred ceeeeccCccccccccc-----cccHHH----HHHhccCcceee----------cCcccCCccceeeceeeEEeecccee
Confidence 57999999998765322 222222 245699999987 55788899999999999999999999
Q ss_pred CCchH---HHH-------------HHhcCCC-------------------------------CCcc----cCC---CC--
Q 000470 160 FELSH---LLA-------------YRRGQYD-------------------------------PSQH----LEK---IP-- 183 (1472)
Q Consensus 160 f~~~~---~~~-------------~~~~~~~-------------------------------~~~~----l~~---~~-- 183 (1472)
|.+.. +.. ++++.+. |... +.. .+
T Consensus 635 FpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~de 714 (752)
T KOG0670|consen 635 FPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDE 714 (752)
T ss_pred cCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCch
Confidence 96432 111 1111111 0000 000 00
Q ss_pred ----CHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 184 ----DSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 184 ----~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
-..+++|+.+||..||++|.+..|+|.|
T Consensus 715 q~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 715 QPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred hHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 1368899999999999999999999998
No 446
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.88 E-value=1.2e-22 Score=256.15 Aligned_cols=192 Identities=18% Similarity=0.260 Sum_probs=133.2
Q ss_pred EeCCeEEEEecccC-CcHHHHHhCCCC--------------------CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000470 14 ETDKAAYLLRQYFF-NSLRDRLSTPPF--------------------LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72 (1472)
Q Consensus 14 ~~~~~~~lV~Ey~~-gsL~d~l~~~~~--------------------l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpe 72 (1472)
..+...|+|+||++ ++|++++..+.. ..+..++.++.||+.||.|||++||+||||||+
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~ 284 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQ 284 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHH
Confidence 35568999999999 699999875431 123446789999999999999999999999999
Q ss_pred CEEEcc-CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccc------------cccCCCCCc
Q 000470 73 NVLVTS-WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQ------------VAQDAPLKP 139 (1472)
Q Consensus 73 NILv~~-~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~------------~~~~~~~t~ 139 (1472)
|||++. .+.+||+|||+++...... .+......+++.|+|||.+........ ......++.
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~ 358 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGI------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPD 358 (566)
T ss_pred HEEEeCCCCcEEEEeCCCcccccccc------ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCC
Confidence 999986 5789999999987542211 112234567889999997753321100 001124567
Q ss_pred cchHHHHHHHHHHHHhCCCCCCchHHHH---HHhcCCC---------C--Cc------ccCCCCCHHHHHHHHHhcccCc
Q 000470 140 SMDIFAVGCVIAELFLEVPFFELSHLLA---YRRGQYD---------P--SQ------HLEKIPDSGIRKMILHMIQLEP 199 (1472)
Q Consensus 140 ~~DIwSlG~il~eLltg~~pf~~~~~~~---~~~~~~~---------~--~~------~l~~~~~~~l~~LI~~mL~~dP 199 (1472)
++||||+||++|||+++..+++...... +....+. . .. ......+...++||.+||++||
T Consensus 359 k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 359 RFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred CcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 7899999999999999765554322111 1111110 0 00 0111223356699999999999
Q ss_pred CCCCCHHHHHHH
Q 000470 200 ELRFSAESYLQN 211 (1472)
Q Consensus 200 ~~Rpsa~elL~~ 211 (1472)
++|||+.|+|+|
T Consensus 439 ~kR~ta~e~L~H 450 (566)
T PLN03225 439 RQRISAKAALAH 450 (566)
T ss_pred ccCCCHHHHhCC
Confidence 999999999999
No 447
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.88 E-value=5.7e-23 Score=213.09 Aligned_cols=197 Identities=21% Similarity=0.392 Sum_probs=148.8
Q ss_pred CCCCcceeeEEEEeC--CeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 2 SSTPCVHKKFWQETD--KAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~--~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
+||||++++++..+. +..-||+||+.. +...+. +.|+.-+++.+++||+.||.|||++||.|||+||.|++++.
T Consensus 91 gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh 167 (338)
T KOG0668|consen 91 GGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH 167 (338)
T ss_pred CCCCeeehhhhhcCccccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech
Confidence 699999999999764 567899999994 555544 34889999999999999999999999999999999999997
Q ss_pred CC-cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC-
Q 000470 79 WN-WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE- 156 (1472)
Q Consensus 79 ~~-~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg- 156 (1472)
.. .++|+|+|++.... |.. + ......+..|-.||.+... ..|+.+-|+|||||+++.|+..
T Consensus 168 ~~rkLrlIDWGLAEFYH-p~~---e----YnVRVASRyfKGPELLVdy---------~~YDYSLD~WS~GcmlA~miFrk 230 (338)
T KOG0668|consen 168 ELRKLRLIDWGLAEFYH-PGK---E----YNVRVASRYFKGPELLVDY---------QMYDYSLDMWSLGCMLASMIFRK 230 (338)
T ss_pred hhceeeeeecchHhhcC-CCc---e----eeeeeehhhcCCchheeec---------hhccccHHHHHHHHHHHHHHhcc
Confidence 65 69999999987552 211 1 2334456779999988632 3678899999999999999998
Q ss_pred CCCCCc----hHHH------------HHHh---cCCCC----------C--------cccCCCCCHHHHHHHHHhcccCc
Q 000470 157 VPFFEL----SHLL------------AYRR---GQYDP----------S--------QHLEKIPDSGIRKMILHMIQLEP 199 (1472)
Q Consensus 157 ~~pf~~----~~~~------------~~~~---~~~~~----------~--------~~l~~~~~~~l~~LI~~mL~~dP 199 (1472)
.|+|.+ .++. .|.. ...++ . ..-....++++.||+.++|..|-
T Consensus 231 epFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDH 310 (338)
T KOG0668|consen 231 EPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDH 310 (338)
T ss_pred CcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhcc
Confidence 566642 2221 1111 00000 0 00112346789999999999999
Q ss_pred CCCCCHHHHHHHhhcccCCCCCChhh
Q 000470 200 ELRFSAESYLQNYAAVVFPTYFSPFL 225 (1472)
Q Consensus 200 ~~Rpsa~elL~~~~~~~fp~~f~~~l 225 (1472)
.+|+||.|++.| +||++..
T Consensus 311 qeRlTakEam~H-------pyF~~~~ 329 (338)
T KOG0668|consen 311 QERLTAKEAMAH-------PYFAPVR 329 (338)
T ss_pred ccccchHHHhcC-------chHHHHH
Confidence 999999999999 6776643
No 448
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.88 E-value=3.2e-23 Score=247.10 Aligned_cols=197 Identities=16% Similarity=0.182 Sum_probs=166.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
..||||+++.++....+...||.|||+ |+|..+|+.+ +.++..+...+++-|+.|++||-++|+|||||...||||++
T Consensus 687 FdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs 766 (996)
T KOG0196|consen 687 FDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS 766 (996)
T ss_pred CCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc
Confidence 379999999999999999999999999 8999999874 66999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCC--CccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGK--RLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL- 155 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~g--t~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt- 155 (1472)
+-..|++|||+++.. ++++. ....+.+| ...|.|||.+. ..++|.++||||+|+++||.++
T Consensus 767 nLvCKVsDFGLSRvl---edd~~---~~ytt~GGKIPiRWTAPEAIa----------~RKFTsASDVWSyGIVmWEVmSy 830 (996)
T KOG0196|consen 767 NLVCKVSDFGLSRVL---EDDPE---AAYTTLGGKIPIRWTAPEAIA----------YRKFTSASDVWSYGIVMWEVMSY 830 (996)
T ss_pred ceEEEeccccceeec---ccCCC---ccccccCCccceeecChhHhh----------hcccCchhhccccceEEEEeccc
Confidence 999999999999855 22221 12234444 45699999775 4578999999999999999875
Q ss_pred C-CCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 156 E-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 156 g-~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
| +|.|+.++..-++..+......-|-.++..+.+|+..||++|-.+||.+.|++..|.
T Consensus 831 GERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lD 889 (996)
T KOG0196|consen 831 GERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLD 889 (996)
T ss_pred CCCcccccchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Confidence 6 788888877666655544443345567789999999999999999999999998854
No 449
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.88 E-value=1.4e-22 Score=233.92 Aligned_cols=194 Identities=16% Similarity=0.170 Sum_probs=159.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++|||+|++++++..+-.+|||+|||. |+|.|||+. +..++......++-||..|++||..+++|||||...|.||.
T Consensus 320 ikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg 399 (1157)
T KOG4278|consen 320 IKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 399 (1157)
T ss_pred hcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc
Confidence 589999999999999999999999999 999999986 44588888999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
++..||++|||+++..... .+... ....-..-|.|||-+. ...++.++|||+||++|||+.| |
T Consensus 400 EnhiVKvADFGLsRlMtgD-----TYTAH-AGAKFPIKWTAPEsLA----------yNtFSiKSDVWAFGVLLWEIATYG 463 (1157)
T KOG4278|consen 400 ENHIVKVADFGLSRLMTGD-----TYTAH-AGAKFPIKWTAPESLA----------YNTFSIKSDVWAFGVLLWEIATYG 463 (1157)
T ss_pred ccceEEeeccchhhhhcCC-----ceecc-cCccCcccccCccccc----------ccccccchhhHHHHHHHHHHHhcC
Confidence 9999999999999865211 11100 0111145599999764 3467889999999999999988 5
Q ss_pred CCCCC---chHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFE---LSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~---~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
-.||. .++...+....|.-. -+..+++.+.+|++.||++.|.+||++.|+-+.+
T Consensus 464 MsPYPGidlSqVY~LLEkgyRM~--~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqaf 520 (1157)
T KOG4278|consen 464 MSPYPGIDLSQVYGLLEKGYRMD--GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAF 520 (1157)
T ss_pred CCCCCCccHHHHHHHHhcccccc--CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHH
Confidence 66764 556666655555533 4567788999999999999999999999998764
No 450
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.88 E-value=3.1e-21 Score=237.47 Aligned_cols=257 Identities=22% Similarity=0.347 Sum_probs=211.0
Q ss_pred CCccc-ccceeee-ccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC
Q 000470 1042 SGWRP-RGILVAH-LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1042 ~~W~p-~G~lV~~-l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~ 1119 (1472)
..|+. .|..+.. |.||.+.|.++++...+.++++||.|.|++|||+.+++ +..++.+|.+.|.++.. ...
T Consensus 231 ~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~------C~~~l~gh~stv~~~~~--~~~ 302 (537)
T KOG0274|consen 231 HLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGE------CTHSLQGHTSSVRCLTI--DPF 302 (537)
T ss_pred EEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCc------EEEEecCCCceEEEEEc--cCc
Confidence 46884 6888888 99999999999997767899999999999999999988 56677788888888765 445
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~ 1199 (1472)
.+++|+.|.+|+||++.+. ........|..+|.++.++.+ ++++|+.||+|.+||++++++
T Consensus 303 ~~~sgs~D~tVkVW~v~n~--------------~~l~l~~~h~~~V~~v~~~~~-----~lvsgs~d~~v~VW~~~~~~c 363 (537)
T KOG0274|consen 303 LLVSGSRDNTVKVWDVTNG--------------ACLNLLRGHTGPVNCVQLDEP-----LLVSGSYDGTVKVWDPRTGKC 363 (537)
T ss_pred eEeeccCCceEEEEeccCc--------------ceEEEeccccccEEEEEecCC-----EEEEEecCceEEEEEhhhcee
Confidence 7888999999999999831 122223337888888877743 999999999999999999999
Q ss_pred cceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCC-cccceEeccccCCceeEEeecCCCCCccccCCCCEEE
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL-VPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1278 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~-~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~ 1278 (1472)
+.++.+ |.+.|+++.++.. ..+++|+.|++|++||++++ .++..+.. +..-+..+.+ .+..++
T Consensus 364 l~sl~g--H~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~-h~~~v~~l~~------------~~~~Lv 427 (537)
T KOG0274|consen 364 LKSLSG--HTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQG-HTSLVSSLLL------------RDNFLV 427 (537)
T ss_pred eeeecC--CcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcC-Cccccccccc------------ccceeE
Confidence 999988 9999999999876 89999999999999999999 88888776 3334444433 245788
Q ss_pred EEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEec
Q 000470 1279 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1358 (1472)
Q Consensus 1279 vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1358 (1472)
+++.|+.|++||.++++|++++... +..+|.+++
T Consensus 428 s~~aD~~Ik~WD~~~~~~~~~~~~~----------------------------------------------~~~~v~~l~ 461 (537)
T KOG0274|consen 428 SSSADGTIKLWDAEEGECLRTLEGR----------------------------------------------HVGGVSALA 461 (537)
T ss_pred eccccccEEEeecccCceeeeeccC----------------------------------------------CcccEEEee
Confidence 9999999999999999999998632 112566666
Q ss_pred cCCCCcEEEccCCCeEEEEeCCCCCCceEE
Q 000470 1359 PLPGGDLLTGGTDLKIRRWDHCSPGRSYCI 1388 (1472)
Q Consensus 1359 ~~p~g~llTgg~Dg~IrlWDl~~~~~s~vv 1388 (1472)
+. ...+++++.||.+++||+.+++..+.+
T Consensus 462 ~~-~~~il~s~~~~~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 462 LG-KEEILCSSDDGSVKLWDLRSGTLIRTL 490 (537)
T ss_pred cC-cceEEEEecCCeeEEEecccCchhhhh
Confidence 64 457899999999999999988776644
No 451
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=5.2e-20 Score=200.34 Aligned_cols=259 Identities=18% Similarity=0.244 Sum_probs=202.4
Q ss_pred eeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeC--CC
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC--DG 1128 (1472)
Q Consensus 1051 V~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~--DG 1128 (1472)
.+.|.+-.+.|+++.|+++|.++++++.|.+++|+|+.++. ...+...+.-.+..++|....+.++.++. |.
T Consensus 7 ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~------~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~ 80 (311)
T KOG1446|consen 7 AKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGK------QVKTINSKKYGVDLACFTHHSNTVIHSSTKEDD 80 (311)
T ss_pred ccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCc------eeeEeecccccccEEEEecCCceEEEccCCCCC
Confidence 35566777899999999999999999999999999999876 33344455555889999988888888776 88
Q ss_pred cEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCC
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1208 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h 1208 (1472)
+||..++.+. ...++..+|...|..+..+|. +..+++++.|++|++||+|..++...+..
T Consensus 81 tIryLsl~dN--------------kylRYF~GH~~~V~sL~~sP~---~d~FlS~S~D~tvrLWDlR~~~cqg~l~~--- 140 (311)
T KOG1446|consen 81 TIRYLSLHDN--------------KYLRYFPGHKKRVNSLSVSPK---DDTFLSSSLDKTVRLWDLRVKKCQGLLNL--- 140 (311)
T ss_pred ceEEEEeecC--------------ceEEEcCCCCceEEEEEecCC---CCeEEecccCCeEEeeEecCCCCceEEec---
Confidence 9999998741 234566678889999999998 67999999999999999999888776654
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEECCC--CcccceEecc--ccCCceeEEeecCCCCCccccCCCCEEEEEEcCC
Q 000470 1209 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRF--LVPVNSWQYS--QVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN 1284 (1472)
Q Consensus 1209 ~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~--~~~i~s~~~~--~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg 1284 (1472)
..-...+|||+|-.+++|...+.|+|||+|. +.+..++... .....+.+.| +|+ |+.+++++..+
T Consensus 141 -~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~F-S~d---------GK~iLlsT~~s 209 (311)
T KOG1446|consen 141 -SGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEF-SPD---------GKSILLSTNAS 209 (311)
T ss_pred -CCCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEE-cCC---------CCEEEEEeCCC
Confidence 3345689999999999999888999999995 3455555543 2345666666 555 55899999999
Q ss_pred eEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-
Q 000470 1285 EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG- 1363 (1472)
Q Consensus 1285 ~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g- 1363 (1472)
.+.+.|.-+|..++.+....... .. . -+..|.|++
T Consensus 210 ~~~~lDAf~G~~~~tfs~~~~~~------------------------------------------~~-~-~~a~ftPds~ 245 (311)
T KOG1446|consen 210 FIYLLDAFDGTVKSTFSGYPNAG------------------------------------------NL-P-LSATFTPDSK 245 (311)
T ss_pred cEEEEEccCCcEeeeEeeccCCC------------------------------------------Cc-c-eeEEECCCCc
Confidence 99999999999887776432210 00 1 355677999
Q ss_pred cEEEccCCCeEEEEeCCCCCCceEEeC
Q 000470 1364 DLLTGGTDLKIRRWDHCSPGRSYCICG 1390 (1472)
Q Consensus 1364 ~llTgg~Dg~IrlWDl~~~~~s~vv~g 1390 (1472)
++++|+.||+|.+|+++++.......|
T Consensus 246 Fvl~gs~dg~i~vw~~~tg~~v~~~~~ 272 (311)
T KOG1446|consen 246 FVLSGSDDGTIHVWNLETGKKVAVLRG 272 (311)
T ss_pred EEEEecCCCcEEEEEcCCCcEeeEecC
Confidence 667999999999999988877655554
No 452
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.88 E-value=1.1e-21 Score=226.88 Aligned_cols=243 Identities=15% Similarity=0.301 Sum_probs=200.8
Q ss_pred EeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEE
Q 000470 1102 YHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFM 1181 (1472)
Q Consensus 1102 ~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~ 1181 (1472)
+..++.+|.++.|+|...+++++-.+|.|+||+.++.. .++.+.. ...+|....|-.. .++++
T Consensus 9 ~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqt-------------mVksfeV-~~~PvRa~kfiaR---knWiv 71 (794)
T KOG0276|consen 9 FQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQT-------------MVKSFEV-SEVPVRAAKFIAR---KNWIV 71 (794)
T ss_pred hhccCCceeeeecCCCCceEEEeeecCeeEEEecccce-------------eeeeeee-cccchhhheeeec---cceEE
Confidence 33467889999999999999999999999999998511 1222221 2345666667776 67999
Q ss_pred EEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCC-cccceEeccccCCceeEEe
Q 000470 1182 YSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL-VPVNSWQYSQVCPIEKMCL 1260 (1472)
Q Consensus 1182 ~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~-~~i~s~~~~~~~~I~~l~~ 1260 (1472)
+|+.|..|++|+..+++.+..++. |.+.|.|++++|...+++++|.|-.|++||-... .+...+. +|..-|.++++
T Consensus 72 ~GsDD~~IrVfnynt~ekV~~FeA--H~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfe-GH~HyVMqv~f 148 (794)
T KOG0276|consen 72 TGSDDMQIRVFNYNTGEKVKTFEA--HSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFE-GHEHYVMQVAF 148 (794)
T ss_pred EecCCceEEEEecccceeeEEeec--cccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEc-CcceEEEEEEe
Confidence 999999999999999999999987 9999999999999999999999999999998754 3344444 46667999999
Q ss_pred ecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccccccc
Q 000470 1261 FVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYR 1340 (1472)
Q Consensus 1261 ~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 1340 (1472)
.|... +.+++++-|++|+||.+.+..+..++.
T Consensus 149 -nPkD~--------ntFaS~sLDrTVKVWslgs~~~nfTl~--------------------------------------- 180 (794)
T KOG0276|consen 149 -NPKDP--------NTFASASLDRTVKVWSLGSPHPNFTLE--------------------------------------- 180 (794)
T ss_pred -cCCCc--------cceeeeeccccEEEEEcCCCCCceeee---------------------------------------
Confidence 77543 578999999999999998776655554
Q ss_pred ccccCCCCCCcCCceEeccCCCC---cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeee
Q 000470 1341 VDELNEPPPRLLGIRSLLPLPGG---DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERK 1417 (1472)
Q Consensus 1341 ~~~l~~~~~~~~~V~sl~~~p~g---~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 1417 (1472)
+|..+|+|+.+-+.| +|+||++|..|++||.++..+..++.|
T Consensus 181 --------gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeG--------------------------- 225 (794)
T KOG0276|consen 181 --------GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEG--------------------------- 225 (794)
T ss_pred --------ccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhc---------------------------
Confidence 455689999998888 899999999999999998777655544
Q ss_pred cCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1418 RQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1418 ~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
|..-|..+ .|++.-++++|||.||+||||.
T Consensus 226 ------------------------Ht~Nvs~v-~fhp~lpiiisgsEDGTvriWh 255 (794)
T KOG0276|consen 226 ------------------------HTNNVSFV-FFHPELPIIISGSEDGTVRIWN 255 (794)
T ss_pred ------------------------ccccceEE-EecCCCcEEEEecCCccEEEec
Confidence 88889988 6999999999999999999994
No 453
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.88 E-value=8.4e-23 Score=209.35 Aligned_cols=165 Identities=16% Similarity=0.124 Sum_probs=131.9
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCCcHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEE
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRL----STPPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLV 76 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l----~~~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvH~DLKpeNILv 76 (1472)
.+|.+|.||+.+..+...++.||.|..+|..+. ...+.++|.-+-+|+..++.||.|||++ .|+|||+||.|||+
T Consensus 103 ~CPf~V~FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI 182 (282)
T KOG0984|consen 103 DCPFTVHFYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI 182 (282)
T ss_pred CCCeEEEeehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE
Confidence 479999999999999999999999998887654 4467799999999999999999999985 99999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+..|+||+||||.+...... .......|...|||||++.... +...|+-++||||||+++.||.++
T Consensus 183 n~~GqVKiCDFGIsG~L~dS--------iAkt~daGCkpYmaPEri~~e~------n~~gY~vksDvWSLGItmiElA~l 248 (282)
T KOG0984|consen 183 NYDGQVKICDFGISGYLVDS--------IAKTMDAGCKPYMAPERINPEL------NQKGYSVKSDVWSLGITMIEMAIL 248 (282)
T ss_pred ccCCcEEEcccccceeehhh--------hHHHHhcCCCccCChhhcCccc------Ccccceeehhhhhhhhhhhhhhhc
Confidence 99999999999987654211 1111123556799999987432 234799999999999999999999
Q ss_pred CCCCCc--hHHHHHHhcCCCCCcccC
Q 000470 157 VPFFEL--SHLLAYRRGQYDPSQHLE 180 (1472)
Q Consensus 157 ~~pf~~--~~~~~~~~~~~~~~~~l~ 180 (1472)
+.||+. ..+..+++....+.+.++
T Consensus 249 r~PY~~w~tpF~qLkqvVeep~P~Lp 274 (282)
T KOG0984|consen 249 RFPYESWGTPFQQLKQVVEEPSPQLP 274 (282)
T ss_pred cccccccCCHHHHHHHHhcCCCCCCc
Confidence 888863 344555555555555554
No 454
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.87 E-value=1e-20 Score=224.16 Aligned_cols=274 Identities=17% Similarity=0.261 Sum_probs=214.7
Q ss_pred eEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccC
Q 000470 1062 NEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRG 1141 (1472)
Q Consensus 1062 ~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~ 1141 (1472)
+=+.|+. ...+|.|.. ..|.+|+..++. .......+...|+++.|+++|.+||+|..+|.|.|||+...
T Consensus 181 nlldWss-~n~laValg-~~vylW~~~s~~------v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~--- 249 (484)
T KOG0305|consen 181 NLLDWSS-ANVLAVALG-QSVYLWSASSGS------VTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQ--- 249 (484)
T ss_pred hHhhccc-CCeEEEEec-ceEEEEecCCCc------eEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhc---
Confidence 3356773 345555443 579999998765 11122223667999999999999999999999999999741
Q ss_pred CCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCC
Q 000470 1142 LGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCG 1221 (1472)
Q Consensus 1142 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g 1221 (1472)
..++.+...|..-|.+++|+.. .+.+|+.+|.|..+|+|..+..-. ....|...|..+.|++++
T Consensus 250 ----------k~~~~~~~~h~~rvg~laW~~~-----~lssGsr~~~I~~~dvR~~~~~~~-~~~~H~qeVCgLkws~d~ 313 (484)
T KOG0305|consen 250 ----------KKTRTLRGSHASRVGSLAWNSS-----VLSSGSRDGKILNHDVRISQHVVS-TLQGHRQEVCGLKWSPDG 313 (484)
T ss_pred ----------cccccccCCcCceeEEEeccCc-----eEEEecCCCcEEEEEEecchhhhh-hhhcccceeeeeEECCCC
Confidence 1233444447788899999855 999999999999999999876655 233488899999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEc--CCeEEEEEcCCCeEEEE
Q 000470 1222 NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG--CNEVSLWNAENGSCHQV 1299 (1472)
Q Consensus 1222 ~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~--dg~V~VWDl~t~~~~~~ 1299 (1472)
.+|++|+.|+.+.+||.+...+...+.. |.+.|..+.| +|... .+|++|+| |+.|++||+.+|.+...
T Consensus 314 ~~lASGgnDN~~~Iwd~~~~~p~~~~~~-H~aAVKA~aw-cP~q~--------~lLAsGGGs~D~~i~fwn~~~g~~i~~ 383 (484)
T KOG0305|consen 314 NQLASGGNDNVVFIWDGLSPEPKFTFTE-HTAAVKALAW-CPWQS--------GLLATGGGSADRCIKFWNTNTGARIDS 383 (484)
T ss_pred CeeccCCCccceEeccCCCccccEEEec-cceeeeEeee-CCCcc--------CceEEcCCCcccEEEEEEcCCCcEecc
Confidence 9999999999999999987777776664 7788999999 78754 47888876 78899999999887665
Q ss_pred EecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEE-E-ccCCCeEEE
Q 000470 1300 LRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL-T-GGTDLKIRR 1376 (1472)
Q Consensus 1300 l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~ll-T-gg~Dg~Irl 1376 (1472)
.... ..|.++.|++.. .|+ | |-.++.|.+
T Consensus 384 vdtg------------------------------------------------sQVcsL~Wsk~~kEi~sthG~s~n~i~l 415 (484)
T KOG0305|consen 384 VDTG------------------------------------------------SQVCSLIWSKKYKELLSTHGYSENQITL 415 (484)
T ss_pred cccC------------------------------------------------CceeeEEEcCCCCEEEEecCCCCCcEEE
Confidence 5321 158999999877 444 4 444889999
Q ss_pred EeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCC
Q 000470 1377 WDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQ 1456 (1472)
Q Consensus 1377 WDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~ 1456 (1472)
|+..+.+....+ .+|...|..++ ++++|
T Consensus 416 w~~ps~~~~~~l---------------------------------------------------~gH~~RVl~la-~SPdg 443 (484)
T KOG0305|consen 416 WKYPSMKLVAEL---------------------------------------------------LGHTSRVLYLA-LSPDG 443 (484)
T ss_pred Eeccccceeeee---------------------------------------------------cCCcceeEEEE-ECCCC
Confidence 998765443333 24999999996 99999
Q ss_pred cEEEEEcCCceEEEcC
Q 000470 1457 RLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1457 ~~LvS~s~DG~IkVWk 1472 (1472)
..|+||+.|.++++|+
T Consensus 444 ~~i~t~a~DETlrfw~ 459 (484)
T KOG0305|consen 444 ETIVTGAADETLRFWN 459 (484)
T ss_pred CEEEEecccCcEEecc
Confidence 9999999999999996
No 455
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=1.8e-20 Score=202.65 Aligned_cols=253 Identities=17% Similarity=0.240 Sum_probs=186.5
Q ss_pred ccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccc
Q 000470 1058 CSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDH 1137 (1472)
Q Consensus 1058 ~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~ 1137 (1472)
.+.|.++.|+|.+..|+.+|.||+++++|+...+ -++.+ .|+.++++++|.+ ...+++|+-||.|+.+|+.+
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~------l~~~~-~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~ 84 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANS------LKLKF-KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNT 84 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchh------hhhhe-ecCCceeeeeccC-CceEEEeccCceEEEEEecC
Confidence 5789999999988888889999999999998754 22233 3567899999987 55788999999999999984
Q ss_pred cccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEE
Q 000470 1138 ISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVT 1217 (1472)
Q Consensus 1138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~ 1217 (1472)
.. ......|+.++.++++.+. ...+++|++|++|++||.|......++.. ...|.|+..
T Consensus 85 ~~---------------~~~igth~~~i~ci~~~~~---~~~vIsgsWD~~ik~wD~R~~~~~~~~d~---~kkVy~~~v 143 (323)
T KOG1036|consen 85 GN---------------EDQIGTHDEGIRCIEYSYE---VGCVISGSWDKTIKFWDPRNKVVVGTFDQ---GKKVYCMDV 143 (323)
T ss_pred Cc---------------ceeeccCCCceEEEEeecc---CCeEEEcccCccEEEEecccccccccccc---CceEEEEec
Confidence 11 1122356778889989876 45899999999999999998666666654 346766655
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcccceEe-ccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCC--
Q 000470 1218 GPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQ-YSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENG-- 1294 (1472)
Q Consensus 1218 sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~-~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~-- 1294 (1472)
.|+.|++|+.+..+.+||+|......... ..-.-.+.+++. .|... -.++++-+|.|.|=.++..
T Consensus 144 --~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~-~pn~e---------Gy~~sSieGRVavE~~d~s~~ 211 (323)
T KOG1036|consen 144 --SGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVAL-VPNGE---------GYVVSSIEGRVAVEYFDDSEE 211 (323)
T ss_pred --cCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEE-ecCCC---------ceEEEeecceEEEEccCCchH
Confidence 48899999999999999999765433211 112235777777 66443 3578888999888666654
Q ss_pred --eEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCC-CcEEEccCC
Q 000470 1295 --SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG-GDLLTGGTD 1371 (1472)
Q Consensus 1295 --~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~-g~llTgg~D 1371 (1472)
+...+|+.+..... ......+|++++|+|- |.++|||+|
T Consensus 212 ~~skkyaFkCHr~~~~--------------------------------------~~~~~yPVNai~Fhp~~~tfaTgGsD 253 (323)
T KOG1036|consen 212 AQSKKYAFKCHRLSEK--------------------------------------DTEIIYPVNAIAFHPIHGTFATGGSD 253 (323)
T ss_pred HhhhceeEEeeecccC--------------------------------------CceEEEEeceeEeccccceEEecCCC
Confidence 34455554432110 0112237999999985 689999999
Q ss_pred CeEEEEeCCCCCCceEEe
Q 000470 1372 LKIRRWDHCSPGRSYCIC 1389 (1472)
Q Consensus 1372 g~IrlWDl~~~~~s~vv~ 1389 (1472)
|.|-+||+.+.++...+.
T Consensus 254 G~V~~Wd~~~rKrl~q~~ 271 (323)
T KOG1036|consen 254 GIVNIWDLFNRKRLKQLA 271 (323)
T ss_pred ceEEEccCcchhhhhhcc
Confidence 999999999888766444
No 456
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.87 E-value=4.5e-21 Score=205.47 Aligned_cols=307 Identities=16% Similarity=0.196 Sum_probs=226.3
Q ss_pred cceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCC
Q 000470 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1127 (1472)
Q Consensus 1048 G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~D 1127 (1472)
-+++..|.||++.|+.++.......+.|+|.|.+.+||.+.++. +..+|.+|.+.|.+++|++.+..+++++.|
T Consensus 138 ~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~------CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD 211 (481)
T KOG0300|consen 138 FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGA------CLATYTGHTGSVNSIKFHNSGLLLLTASGD 211 (481)
T ss_pred EeehhhhcccccceeeehhhcCCcceeecccccceeEEeecccc------ceeeecccccceeeEEeccccceEEEccCC
Confidence 35889999999999999998777799999999999999999876 778999999999999999999999999999
Q ss_pred CcEEEEEccc----cc--cCCCc-----c-------------ccccCccccee---ecCCCCcEEEEEEecCCCCCceEE
Q 000470 1128 GIIHMFSVDH----IS--RGLGN-----V-------------EKYSGISDIKK---KDTKEGAIVTLVNYNTDNCASHMF 1180 (1472)
Q Consensus 1128 G~I~vwdv~~----~~--~~~~~-----~-------------~~~~~~~~~~~---~~~~~~~~v~~~~~~~d~~s~~~L 1180 (1472)
++-+||...- .+ ...+. . .+..+ ..+|. -...|..+|.+..|-.. ++.+
T Consensus 212 ~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~-~tiRvPl~~ltgH~~vV~a~dWL~g---g~Q~ 287 (481)
T KOG0300|consen 212 ETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDG-HTIRVPLMRLTGHRAVVSACDWLAG---GQQM 287 (481)
T ss_pred cchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCC-ceeeeeeeeeeccccceEehhhhcC---ccee
Confidence 9999998321 00 00000 0 00000 01111 11235556666667665 7799
Q ss_pred EEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEe
Q 000470 1181 MYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCL 1260 (1472)
Q Consensus 1181 ~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~ 1260 (1472)
+++++|.+-.+||+.++..+..+.+ |....+-++-+|..+.+++.+.|-+.++||+|-...--..-.+|...+++..|
T Consensus 288 vTaSWDRTAnlwDVEtge~v~~LtG--Hd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF 365 (481)
T KOG0300|consen 288 VTASWDRTANLWDVETGEVVNILTG--HDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVF 365 (481)
T ss_pred eeeeccccceeeeeccCceeccccC--cchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEE
Confidence 9999999999999999999999987 78889999999999999999999999999999544333333357778888888
Q ss_pred ecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCe-EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccc
Q 000470 1261 FVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKY 1339 (1472)
Q Consensus 1261 ~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 1339 (1472)
.-+ ..+++|+.|.+|+|||++++. ...+++..
T Consensus 366 -~~d----------d~vVSgSDDrTvKvWdLrNMRsplATIRtd------------------------------------ 398 (481)
T KOG0300|consen 366 -NTD----------DRVVSGSDDRTVKVWDLRNMRSPLATIRTD------------------------------------ 398 (481)
T ss_pred -ecC----------CceeecCCCceEEEeeeccccCcceeeecC------------------------------------
Confidence 333 248889999999999998753 22333311
Q ss_pred cccccCCCCCCcCCceEeccCCCCc-EEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeec
Q 000470 1340 RVDELNEPPPRLLGIRSLLPLPGGD-LLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKR 1418 (1472)
Q Consensus 1340 ~~~~l~~~~~~~~~V~sl~~~p~g~-llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 1418 (1472)
.+++.++.+.++. ++---+.+.||+||+......+.-
T Consensus 399 ------------S~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlP------------------------------ 436 (481)
T KOG0300|consen 399 ------------SPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLP------------------------------ 436 (481)
T ss_pred ------------CccceeEeecCCceEEeccCCceEEEEecCCCccccCC------------------------------
Confidence 1456667766664 446666789999998743321100
Q ss_pred CCcchhhhhHHHHhhhhcCCCCCCccceeEEeeee-cCCcEEEEEcCCceEEEcC
Q 000470 1419 QPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK-LNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1419 ~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~-~~~~~LvS~s~DG~IkVWk 1472 (1472)
...-.||..-|+++|+.+ .+-.-|.||+.|..+.=|+
T Consensus 437 -----------------rtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~ 474 (481)
T KOG0300|consen 437 -----------------RTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWK 474 (481)
T ss_pred -----------------cccccccceeeeeeeccccCcccccccccccceeeeeE
Confidence 001236999999998333 2356699999999998885
No 457
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.87 E-value=3.2e-21 Score=233.07 Aligned_cols=257 Identities=15% Similarity=0.221 Sum_probs=197.6
Q ss_pred eeecc-ccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCC----------------------------cc----cc---
Q 000470 1051 VAHLQ-EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKL----------------------------EK----DI--- 1094 (1472)
Q Consensus 1051 V~~l~-~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~----------------------------e~----~~--- 1094 (1472)
...+. +|.++|+++.||+||+||||||.||.|+||.+... +. ..
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~ 338 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS 338 (712)
T ss_pred eeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence 34566 89999999999999999999999999999987650 00 00
Q ss_pred -------------------ccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccce
Q 000470 1095 -------------------SFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIK 1155 (1472)
Q Consensus 1095 -------------------~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~ 1155 (1472)
.-++.+.|.+|.+.|.++.|+.++ .|++++.|.+|++|++.. . .++.
T Consensus 339 ~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~-~------------~CL~ 404 (712)
T KOG0283|consen 339 SRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGR-K------------ECLK 404 (712)
T ss_pred cccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCC-c------------ceee
Confidence 012345678899999999998764 788999999999999973 1 0111
Q ss_pred eecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEE
Q 000470 1156 KKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTL 1235 (1472)
Q Consensus 1156 ~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~l 1235 (1472)
--.|..-|+|++|+|.+ .+++++|+-||.|++|++-..+.+.-... ...||++||.|+|...++||-+|.+++
T Consensus 405 --~F~HndfVTcVaFnPvD--DryFiSGSLD~KvRiWsI~d~~Vv~W~Dl---~~lITAvcy~PdGk~avIGt~~G~C~f 477 (712)
T KOG0283|consen 405 --VFSHNDFVTCVAFNPVD--DRYFISGSLDGKVRLWSISDKKVVDWNDL---RDLITAVCYSPDGKGAVIGTFNGYCRF 477 (712)
T ss_pred --EEecCCeeEEEEecccC--CCcEeecccccceEEeecCcCeeEeehhh---hhhheeEEeccCCceEEEEEeccEEEE
Confidence 12467889999999986 56999999999999999988777654443 478999999999999999999999999
Q ss_pred EECCCCcccceEeccc-------cCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCC
Q 000470 1236 WDLRFLVPVNSWQYSQ-------VCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGD 1308 (1472)
Q Consensus 1236 WDlr~~~~i~s~~~~~-------~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~ 1308 (1472)
|+.+..+....+.... ...|+.+.+ .|... ..|+|.+.|..|+|+|.++.+.+..|......
T Consensus 478 Y~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~-~p~~~--------~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~-- 546 (712)
T KOG0283|consen 478 YDTEGLKLVSDFHIRLHNKKKKQGKRITGLQF-FPGDP--------DEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNT-- 546 (712)
T ss_pred EEccCCeEEEeeeEeeccCccccCceeeeeEe-cCCCC--------CeEEEecCCCceEEEeccchhhhhhhcccccC--
Confidence 9999887777665422 226999988 55432 25889999999999999877766666532210
Q ss_pred CccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCCCC
Q 000470 1309 TEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSP 1382 (1472)
Q Consensus 1309 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~ 1382 (1472)
..-....|+.+| .||+|++|..|++|+....
T Consensus 547 -------------------------------------------~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 547 -------------------------------------------SSQISASFSSDGKHIVSASEDSWVYIWKNDSF 578 (712)
T ss_pred -------------------------------------------CcceeeeEccCCCEEEEeecCceEEEEeCCCC
Confidence 011233445577 8889999999999998543
No 458
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.87 E-value=1.5e-20 Score=210.12 Aligned_cols=283 Identities=17% Similarity=0.200 Sum_probs=226.7
Q ss_pred cceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEcccc
Q 000470 1059 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHI 1138 (1472)
Q Consensus 1059 ~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~ 1138 (1472)
..|+++...|...+++||+.|.++.++|..+.. -..+|.+|...|+++.|+++...+++++.|..|+||.+...
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q------~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~ 293 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQ------ILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLS 293 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhh------hhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccc
Confidence 457888888877899999999999999987654 56688999999999999999999999999999999988631
Q ss_pred ccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEc
Q 000470 1139 SRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTG 1218 (1472)
Q Consensus 1139 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~s 1218 (1472)
. .......|..+|+.+..+|. |.+|+++++||+..+.|++++............-.+++.+|+
T Consensus 294 s--------------~~~~~~~h~~~V~~ls~h~t---geYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fH 356 (506)
T KOG0289|consen 294 S--------------EPTSSRPHEEPVTGLSLHPT---GEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFH 356 (506)
T ss_pred c--------------CccccccccccceeeeeccC---CcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEc
Confidence 1 12223456778888889998 889999999999999999999987665542233458999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEE
Q 000470 1219 PCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQ 1298 (1472)
Q Consensus 1219 p~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~ 1298 (1472)
|||..|.+|+.||.|++||+..+..+..|.. |.++|..+.| + .+|+|+++++.|++|.+||+++.+..+
T Consensus 357 pDgLifgtgt~d~~vkiwdlks~~~~a~Fpg-ht~~vk~i~F-s---------ENGY~Lat~add~~V~lwDLRKl~n~k 425 (506)
T KOG0289|consen 357 PDGLIFGTGTPDGVVKIWDLKSQTNVAKFPG-HTGPVKAISF-S---------ENGYWLATAADDGSVKLWDLRKLKNFK 425 (506)
T ss_pred CCceEEeccCCCceEEEEEcCCccccccCCC-CCCceeEEEe-c---------cCceEEEEEecCCeEEEEEehhhcccc
Confidence 9999999999999999999999988877775 8889999988 3 357799999999999999999876555
Q ss_pred EEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEE
Q 000470 1299 VLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRW 1377 (1472)
Q Consensus 1299 ~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlW 1377 (1472)
.+.... ..+|.++.|.+.| +|+.+|.|=+|+++
T Consensus 426 t~~l~~----------------------------------------------~~~v~s~~fD~SGt~L~~~g~~l~Vy~~ 459 (506)
T KOG0289|consen 426 TIQLDE----------------------------------------------KKEVNSLSFDQSGTYLGIAGSDLQVYIC 459 (506)
T ss_pred eeeccc----------------------------------------------cccceeEEEcCCCCeEEeecceeEEEEE
Confidence 443111 1158899999888 67788999888888
Q ss_pred eCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCc
Q 000470 1378 DHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQR 1457 (1472)
Q Consensus 1378 Dl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~ 1457 (1472)
+-.+..-..+.. +.-|.+..+.| .|.....
T Consensus 460 ~k~~k~W~~~~~-------------------------------------------------~~~~sg~st~v-~Fg~~aq 489 (506)
T KOG0289|consen 460 KKKTKSWTEIKE-------------------------------------------------LADHSGLSTGV-RFGEHAQ 489 (506)
T ss_pred ecccccceeeeh-------------------------------------------------hhhccccccee-eecccce
Confidence 754433221111 11266677777 4888899
Q ss_pred EEEEEcCCceEEEc
Q 000470 1458 LLISSSRDGAIKVW 1471 (1472)
Q Consensus 1458 ~LvS~s~DG~IkVW 1471 (1472)
+++++|.|...+++
T Consensus 490 ~l~s~smd~~l~~~ 503 (506)
T KOG0289|consen 490 YLASTSMDAILRLY 503 (506)
T ss_pred EEeeccchhheEEe
Confidence 99999999999886
No 459
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.87 E-value=1.2e-22 Score=242.40 Aligned_cols=144 Identities=24% Similarity=0.227 Sum_probs=123.0
Q ss_pred CCCCCcceeeEEEEeCC------eEEEEecccC-CcHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 000470 1 MSSTPCVHKKFWQETDK------AAYLLRQYFF-NSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 70 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~------~~~lV~Ey~~-gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLK 70 (1472)
|+|||||++.++-++.. ...+|||||. |+|+.++... ..|++.+...++..+..||.|||++||+|||||
T Consensus 68 Lnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlK 147 (732)
T KOG4250|consen 68 LNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLK 147 (732)
T ss_pred cCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Confidence 68999999999887654 5689999999 7999999763 249999999999999999999999999999999
Q ss_pred CCCEEEcc--CC--cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHH
Q 000470 71 CENVLVTS--WN--WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 146 (1472)
Q Consensus 71 peNILv~~--~~--~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSl 146 (1472)
|+||++-. +| ..||+|||.||..... ..+.+..||..|++||.+.. ...|+..+|.||+
T Consensus 148 P~NIvl~~Gedgq~IyKLtDfG~Arel~d~--------s~~~S~vGT~~YLhPel~E~---------q~~y~~tVDLWS~ 210 (732)
T KOG4250|consen 148 PGNIVLQIGEDGQSIYKLTDFGAARELDDN--------SLFTSLVGTEEYLHPELYER---------QKKYTATVDLWSF 210 (732)
T ss_pred CCcEEEeecCCCceEEeeecccccccCCCC--------CeeeeecCchhhcChHHHhh---------ccCcCceeehhhh
Confidence 99999843 23 4899999999976311 14677789999999998742 3578999999999
Q ss_pred HHHHHHHHhCCCCCC
Q 000470 147 GCVIAELFLEVPFFE 161 (1472)
Q Consensus 147 G~il~eLltg~~pf~ 161 (1472)
||++|+..||..||.
T Consensus 211 GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 211 GVTLYECATGELPFI 225 (732)
T ss_pred hhHHHHHhccCCCCC
Confidence 999999999988884
No 460
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.87 E-value=1.1e-20 Score=233.43 Aligned_cols=301 Identities=15% Similarity=0.210 Sum_probs=219.3
Q ss_pred ccc-cceeEEEEcCCCCEEEEEe--CCCCEEEEeCCCCc-----ccc-ccccceEEeccCCceEEEEEecCCCEEEEEeC
Q 000470 1056 EHC-SAVNEIAISHDHSFFVSAS--DDSTVKVWDSRKLE-----KDI-SFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1126 (1472)
Q Consensus 1056 ~H~-~~V~~lafspd~~~laSgS--~DGtVkvWD~~~~e-----~~~-~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~ 1126 (1472)
+|. ..|.+|.++|||..||||+ .||.++||.....- ++. ..+..++...|.+.|+|+.|++||.+||+||+
T Consensus 10 ~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSD 89 (942)
T KOG0973|consen 10 NHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSD 89 (942)
T ss_pred ccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccC
Confidence 444 5799999999999999999 89999999976432 222 23456778889999999999999999999999
Q ss_pred CCcEEEEEccccccCCCccccc-cCc-----ccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCcc
Q 000470 1127 DGIIHMFSVDHISRGLGNVEKY-SGI-----SDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1200 (1472)
Q Consensus 1127 DG~I~vwdv~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~ 1200 (1472)
|+.|.||+-... ..+...+. .+. .........|..-|.-++|+|+ +.+|++++.|++|.+||.++.+.+
T Consensus 90 D~~v~iW~~~~~--~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~---~~~lvS~s~DnsViiwn~~tF~~~ 164 (942)
T KOG0973|consen 90 DRLVMIWERAEI--GSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD---DSLLVSVSLDNSVIIWNAKTFELL 164 (942)
T ss_pred cceEEEeeeccc--CCcccccccccccccceeeEEEEEecCCCccceeccCCC---ccEEEEecccceEEEEccccceee
Confidence 999999998731 11111111 011 1122223345666667789998 679999999999999999999989
Q ss_pred ceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEecccc-----CCceeEEeecCCCCCccccCCCC
Q 000470 1201 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQV-----CPIEKMCLFVPPPNAAVSTTARP 1275 (1472)
Q Consensus 1201 ~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~-----~~I~~l~~~~p~~~~~~~~~~~~ 1275 (1472)
.++.. |++.|-.+.|||-|++|++-+.|++|++|++......+++..+.. ....++.| +|++.
T Consensus 165 ~vl~~--H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSW-SPDG~--------- 232 (942)
T KOG0973|consen 165 KVLRG--HQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSW-SPDGH--------- 232 (942)
T ss_pred eeeec--ccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeeccc-CCCcC---------
Confidence 99987 999999999999999999999999999999777666666655432 24567777 77665
Q ss_pred EEEEEEc----CCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCc
Q 000470 1276 LIYVAAG----CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRL 1351 (1472)
Q Consensus 1276 ~l~vas~----dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1351 (1472)
+++++.+ -..+.|.+-.+.++-.-|.+ |.
T Consensus 233 ~las~nA~n~~~~~~~IieR~tWk~~~~LvG-----------------------------------------------H~ 265 (942)
T KOG0973|consen 233 HLASPNAVNGGKSTIAIIERGTWKVDKDLVG-----------------------------------------------HS 265 (942)
T ss_pred eecchhhccCCcceeEEEecCCceeeeeeec-----------------------------------------------CC
Confidence 6666533 23466666555444444432 22
Q ss_pred CCceEeccCC--------C----------CcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEE
Q 000470 1352 LGIRSLLPLP--------G----------GDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVV 1413 (1472)
Q Consensus 1352 ~~V~sl~~~p--------~----------g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~ 1413 (1472)
.++.++.|+| + ..+++||.|+.|-+|....+....++...
T Consensus 266 ~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~l---------------------- 323 (942)
T KOG0973|consen 266 APVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNL---------------------- 323 (942)
T ss_pred CceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhh----------------------
Confidence 3344444432 0 13558999999999998766554433210
Q ss_pred EeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000470 1414 QERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1414 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVW 1471 (1472)
-..+|.|+. |+++|..|..||.||+|.+.
T Consensus 324 ----------------------------f~~SI~Dms-WspdG~~LfacS~DGtV~~i 352 (942)
T KOG0973|consen 324 ----------------------------FNKSIVDMS-WSPDGFSLFACSLDGTVALI 352 (942)
T ss_pred ----------------------------hcCceeeee-EcCCCCeEEEEecCCeEEEE
Confidence 235799995 99999999999999999875
No 461
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.87 E-value=8.2e-21 Score=197.00 Aligned_cols=223 Identities=19% Similarity=0.248 Sum_probs=178.8
Q ss_pred CCCccc-ccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC
Q 000470 1041 DSGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1041 ~~~W~p-~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~ 1119 (1472)
-..|+| +|.|++++.+|...|..++.+.|+..|++|+.|..|.+||+.+++ ....+.+|.+.|..+.|.+.+.
T Consensus 41 vrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGk------v~Rr~rgH~aqVNtV~fNeesS 114 (307)
T KOG0316|consen 41 VRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGK------VDRRFRGHLAQVNTVRFNEESS 114 (307)
T ss_pred EEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCe------eeeecccccceeeEEEecCcce
Confidence 468997 699999999999999999999999999999999999999999987 3446778999999999999999
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~ 1199 (1472)
.+++|+.|.++++||.+.. ..+++..++.. ...|..+..+. ..+++|+.||+++.||+|.|+.
T Consensus 115 Vv~SgsfD~s~r~wDCRS~-----------s~ePiQildea-~D~V~Si~v~~-----heIvaGS~DGtvRtydiR~G~l 177 (307)
T KOG0316|consen 115 VVASGSFDSSVRLWDCRSR-----------SFEPIQILDEA-KDGVSSIDVAE-----HEIVAGSVDGTVRTYDIRKGTL 177 (307)
T ss_pred EEEeccccceeEEEEcccC-----------CCCccchhhhh-cCceeEEEecc-----cEEEeeccCCcEEEEEeeccee
Confidence 9999999999999999731 12233333322 23344554543 3899999999999999999887
Q ss_pred cceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeE--EeecCCCCCccccCCCCEE
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKM--CLFVPPPNAAVSTTARPLI 1277 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l--~~~~p~~~~~~~~~~~~~l 1277 (1472)
....- ..+|+|++|+++++..+.|+-+++|++-|-.+++.++++.. |...-.++ ++ ... ...+
T Consensus 178 ~sDy~----g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkG-hkn~eykldc~l-~qs---------dthV 242 (307)
T KOG0316|consen 178 SSDYF----GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKG-HKNMEYKLDCCL-NQS---------DTHV 242 (307)
T ss_pred ehhhc----CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcc-cccceeeeeeee-ccc---------ceeE
Confidence 55443 45899999999999999999999999999999999988775 33222222 22 222 2368
Q ss_pred EEEEcCCeEEEEEcCCCeEEEEEe
Q 000470 1278 YVAAGCNEVSLWNAENGSCHQVLR 1301 (1472)
Q Consensus 1278 ~vas~dg~V~VWDl~t~~~~~~l~ 1301 (1472)
+.|+.||.|.+||+........+.
T Consensus 243 ~sgSEDG~Vy~wdLvd~~~~sk~~ 266 (307)
T KOG0316|consen 243 FSGSEDGKVYFWDLVDETQISKLS 266 (307)
T ss_pred EeccCCceEEEEEeccceeeeeec
Confidence 899999999999999877666555
No 462
>PTZ00420 coronin; Provisional
Probab=99.87 E-value=2.7e-20 Score=229.92 Aligned_cols=226 Identities=12% Similarity=0.161 Sum_probs=166.3
Q ss_pred CCccc-ccceeeeccccccceeEEEEcCC-CCEEEEEeCCCCEEEEeCCCCcccc-c-cccceEEeccCCceEEEEEecC
Q 000470 1042 SGWRP-RGILVAHLQEHCSAVNEIAISHD-HSFFVSASDDSTVKVWDSRKLEKDI-S-FRSRLTYHLEGSRALCTMMLRH 1117 (1472)
Q Consensus 1042 ~~W~p-~G~lV~~l~~H~~~V~~lafspd-~~~laSgS~DGtVkvWD~~~~e~~~-~-~~~~~t~~~~~~~I~~v~f~~~ 1117 (1472)
..|+. +...+..+.+|.++|++++|+|+ +.+|||||.||+|+|||+.+..... . ......+.+|...|.+++|+|+
T Consensus 57 ~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~ 136 (568)
T PTZ00420 57 RLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPM 136 (568)
T ss_pred EeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCC
Confidence 35653 45678899999999999999996 7899999999999999997643111 0 1233466788889999999998
Q ss_pred CCE-EEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCC
Q 000470 1118 SAQ-VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRS 1196 (1472)
Q Consensus 1118 ~~~-las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt 1196 (1472)
+.. +++|+.||+|+|||+.... ....+ .+...+.++.|+++ |.+|++++.|+.|++||+|+
T Consensus 137 g~~iLaSgS~DgtIrIWDl~tg~-------------~~~~i--~~~~~V~Slswspd---G~lLat~s~D~~IrIwD~Rs 198 (568)
T PTZ00420 137 NYYIMCSSGFDSFVNIWDIENEK-------------RAFQI--NMPKKLSSLKWNIK---GNLLSGTCVGKHMHIIDPRK 198 (568)
T ss_pred CCeEEEEEeCCCeEEEEECCCCc-------------EEEEE--ecCCcEEEEEECCC---CCEEEEEecCCEEEEEECCC
Confidence 765 5789999999999997311 11111 23456888999998 77999999999999999999
Q ss_pred CCccceeecCCCccceEEE-----EEcCCCCEEEEEeCCC----cEEEEECCC-CcccceEeccccCCceeEEeecCCCC
Q 000470 1197 NSNTWTLKAIPEEGYVSSL-----VTGPCGNWFVSGSSRG----VLTLWDLRF-LVPVNSWQYSQVCPIEKMCLFVPPPN 1266 (1472)
Q Consensus 1197 ~~~~~~l~~~~h~g~Itsl-----~~sp~g~~LvsGssdG----~I~lWDlr~-~~~i~s~~~~~~~~I~~l~~~~p~~~ 1266 (1472)
++.+.++.. |.+.+.+. .|++++.+|++++.++ .|++||+|. ..++..+.......+....+ .++
T Consensus 199 g~~i~tl~g--H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~-D~~-- 273 (568)
T PTZ00420 199 QEIASSFHI--HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHY-DES-- 273 (568)
T ss_pred CcEEEEEec--ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEee-eCC--
Confidence 998887765 66654433 3458888988877664 799999995 56666654432222111122 221
Q ss_pred CccccCCCCEEEEEEcCCeEEEEEcCCCeE
Q 000470 1267 AAVSTTARPLIYVAAGCNEVSLWNAENGSC 1296 (1472)
Q Consensus 1267 ~~~~~~~~~~l~vas~dg~V~VWDl~t~~~ 1296 (1472)
.+.++++|++|+.|++|++..+.+
T Consensus 274 ------tg~l~lsGkGD~tIr~~e~~~~~~ 297 (568)
T PTZ00420 274 ------TGLIYLIGKGDGNCRYYQHSLGSI 297 (568)
T ss_pred ------CCCEEEEEECCCeEEEEEccCCcE
Confidence 245788899999999999987753
No 463
>PTZ00421 coronin; Provisional
Probab=99.87 E-value=3.6e-20 Score=228.15 Aligned_cols=266 Identities=12% Similarity=0.116 Sum_probs=185.9
Q ss_pred cccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccc----c---ccceEEeccCCceEEEEEec-CCCEEEEEeCCC
Q 000470 1057 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDIS----F---RSRLTYHLEGSRALCTMMLR-HSAQVVVGACDG 1128 (1472)
Q Consensus 1057 H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~----~---~~~~t~~~~~~~I~~v~f~~-~~~~las~s~DG 1128 (1472)
|-..|+....++|+..+++++.+..+..|+...+..... . .....+.+|.+.|++++|+| +++.|++|+.||
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg 98 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG 98 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC
Confidence 344566666777877788888888888888654321110 0 11224678899999999999 789999999999
Q ss_pred cEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCC
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1208 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h 1208 (1472)
+|++||+..... .... ...+. ....|...|.++.|+|+. +++|++++.|++|++||+++++....+.. |
T Consensus 99 tIkIWdi~~~~~----~~~~--~~~l~-~L~gH~~~V~~l~f~P~~--~~iLaSgs~DgtVrIWDl~tg~~~~~l~~--h 167 (493)
T PTZ00421 99 TIMGWGIPEEGL----TQNI--SDPIV-HLQGHTKKVGIVSFHPSA--MNVLASAGADMVVNVWDVERGKAVEVIKC--H 167 (493)
T ss_pred EEEEEecCCCcc----cccc--CcceE-EecCCCCcEEEEEeCcCC--CCEEEEEeCCCEEEEEECCCCeEEEEEcC--C
Confidence 999999973110 0000 01122 223466778899999974 35999999999999999999988777765 7
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEE----cCC
Q 000470 1209 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA----GCN 1284 (1472)
Q Consensus 1209 ~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas----~dg 1284 (1472)
.+.|++++|+|+|.+|++|+.||.|++||+|.+..+..+.......+.++.| .+... .+++++ .++
T Consensus 168 ~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w-~~~~~---------~ivt~G~s~s~Dr 237 (493)
T PTZ00421 168 SDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLW-AKRKD---------LIITLGCSKSQQR 237 (493)
T ss_pred CCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEE-cCCCC---------eEEEEecCCCCCC
Confidence 8899999999999999999999999999999998887765422223344555 55432 455543 368
Q ss_pred eEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-
Q 000470 1285 EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG- 1363 (1472)
Q Consensus 1285 ~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g- 1363 (1472)
.|.+||+++......... . .....+....|++++
T Consensus 238 ~VklWDlr~~~~p~~~~~--~-------------------------------------------d~~~~~~~~~~d~d~~ 272 (493)
T PTZ00421 238 QIMLWDTRKMASPYSTVD--L-------------------------------------------DQSSALFIPFFDEDTN 272 (493)
T ss_pred eEEEEeCCCCCCceeEec--c-------------------------------------------CCCCceEEEEEcCCCC
Confidence 999999986542211110 0 011134556677887
Q ss_pred cEEEcc-CCCeEEEEeCCCCCCceEE
Q 000470 1364 DLLTGG-TDLKIRRWDHCSPGRSYCI 1388 (1472)
Q Consensus 1364 ~llTgg-~Dg~IrlWDl~~~~~s~vv 1388 (1472)
.+++|| .|+.||+||+.+++..+..
T Consensus 273 ~L~lggkgDg~Iriwdl~~~~~~~~~ 298 (493)
T PTZ00421 273 LLYIGSKGEGNIRCFELMNERLTFCS 298 (493)
T ss_pred EEEEEEeCCCeEEEEEeeCCceEEEe
Confidence 555666 5999999999987655443
No 464
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.87 E-value=5.2e-22 Score=270.50 Aligned_cols=190 Identities=17% Similarity=0.229 Sum_probs=145.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCH---EKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH---~~gIvH~DLKpeNILv 76 (1472)
++||||+++++++.++...|+||||++ |+|.++++. +++.++..|+.|++.||+||| +.+|+||||||+||++
T Consensus 740 l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~ 816 (968)
T PLN00113 740 LQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII 816 (968)
T ss_pred CCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE
Confidence 579999999999999999999999999 799999964 789999999999999999999 6699999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++..++. ||....... .....+++.|+|||.+. ...++.++||||+||++|||++|
T Consensus 817 ~~~~~~~~~-~~~~~~~~~-----------~~~~~~t~~y~aPE~~~----------~~~~~~~sDv~S~Gvvl~el~tg 874 (968)
T PLN00113 817 DGKDEPHLR-LSLPGLLCT-----------DTKCFISSAYVAPETRE----------TKDITEKSDIYGFGLILIELLTG 874 (968)
T ss_pred CCCCceEEE-ecccccccc-----------CCCccccccccCccccc----------CCCCCcccchhhHHHHHHHHHhC
Confidence 998887775 664432210 01224678899999764 34688999999999999999999
Q ss_pred CCCCCch-----HHHHHHhcCCCC-------CcccCC------CCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcc
Q 000470 157 VPFFELS-----HLLAYRRGQYDP-------SQHLEK------IPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 215 (1472)
Q Consensus 157 ~~pf~~~-----~~~~~~~~~~~~-------~~~l~~------~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 215 (1472)
++||+.. ...++.+..+.. .+.+.. ....++.+++.+||+.||++||+++|+++.++..
T Consensus 875 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 875 KSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred CCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 9888532 122221111100 001100 1112567899999999999999999999986543
No 465
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.87 E-value=3.2e-21 Score=206.58 Aligned_cols=259 Identities=18% Similarity=0.304 Sum_probs=199.0
Q ss_pred ceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCC
Q 000470 1049 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1128 (1472)
Q Consensus 1049 ~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG 1128 (1472)
.++++|-.|.+.|+.+.|+|....|+|||.|++||++|..+..-...+ .+-....+|.++.|+|.|..+++|+...
T Consensus 163 PvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~----K~~qd~~~vrsiSfHPsGefllvgTdHp 238 (430)
T KOG0640|consen 163 PVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAF----KVFQDTEPVRSISFHPSGEFLLVGTDHP 238 (430)
T ss_pred ceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHH----HHhhccceeeeEeecCCCceEEEecCCC
Confidence 378999999999999999999999999999999999999864321111 1223445799999999999999999999
Q ss_pred cEEEEEccccccCCCccccccCccccee--ecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecC
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKK--KDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1206 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~ 1206 (1472)
++|+||+.+.. +... .+..|...|+++.+++. +.+.++|+.||.|++||=-+++|+.++.+.
T Consensus 239 ~~rlYdv~T~Q-------------cfvsanPd~qht~ai~~V~Ys~t---~~lYvTaSkDG~IklwDGVS~rCv~t~~~A 302 (430)
T KOG0640|consen 239 TLRLYDVNTYQ-------------CFVSANPDDQHTGAITQVRYSST---GSLYVTASKDGAIKLWDGVSNRCVRTIGNA 302 (430)
T ss_pred ceeEEecccee-------------EeeecCcccccccceeEEEecCC---ccEEEEeccCCcEEeeccccHHHHHHHHhh
Confidence 99999998522 1111 23356678899999998 789999999999999999999999999874
Q ss_pred CCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEE-cCCe
Q 000470 1207 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA-GCNE 1285 (1472)
Q Consensus 1207 ~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas-~dg~ 1285 (1472)
.....|++..|..+|+++++.+-|..++||.+.++.+++.+.......-... - .+ +.|.....+++.-. ..++
T Consensus 303 H~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~----r-tq-AvFNhtEdyVl~pDEas~s 376 (430)
T KOG0640|consen 303 HGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKH----R-TQ-AVFNHTEDYVLFPDEASNS 376 (430)
T ss_pred cCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhh----h-hh-hhhcCccceEEccccccCc
Confidence 4455799999999999999999999999999999999998876432211000 0 00 11111222444333 3567
Q ss_pred EEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-c
Q 000470 1286 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-D 1364 (1472)
Q Consensus 1286 V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~ 1364 (1472)
+--||.+++..+..+. .+|...++.+..+|.+ .
T Consensus 377 lcsWdaRtadr~~l~s----------------------------------------------lgHn~a~R~i~HSP~~p~ 410 (430)
T KOG0640|consen 377 LCSWDARTADRVALLS----------------------------------------------LGHNGAVRWIVHSPVEPA 410 (430)
T ss_pred eeeccccchhhhhhcc----------------------------------------------cCCCCCceEEEeCCCCCc
Confidence 8889988765433322 4566789999999988 7
Q ss_pred EEEccCCCeEEEEeC
Q 000470 1365 LLTGGTDLKIRRWDH 1379 (1472)
Q Consensus 1365 llTgg~Dg~IrlWDl 1379 (1472)
++|||.|.++|||--
T Consensus 411 FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 411 FMTCSDDFRARFWYR 425 (430)
T ss_pred eeeecccceeeeeee
Confidence 889999999999963
No 466
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.86 E-value=9.6e-23 Score=235.73 Aligned_cols=141 Identities=29% Similarity=0.289 Sum_probs=126.3
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-C-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-N-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+|+||++++++||+++.+||+||--+ | +|+++|.-++.++|.+++.|++|++.|+++||++||||||||-||++++++
T Consensus 627 sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~ 706 (772)
T KOG1152|consen 627 SHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSN 706 (772)
T ss_pred CccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecC
Confidence 49999999999999999999999887 6 999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||.+..+ .+..|++..||..|.|||++.+.. ..+..-|||++|+++|.++....|
T Consensus 707 g~~klidfgsaa~~---------ksgpfd~f~gtv~~aapevl~g~~---------y~gk~qdiwalgillytivykenp 768 (772)
T KOG1152|consen 707 GFVKLIDFGSAAYT---------KSGPFDVFVGTVDYAAPEVLGGEK---------YLGKPQDIWALGILLYTIVYKENP 768 (772)
T ss_pred CeEEEeeccchhhh---------cCCCcceeeeeccccchhhhCCCc---------cCCCcchhhhhhheeeEEEeccCC
Confidence 99999999987654 133568888999999999886433 346677999999999999888555
Q ss_pred C
Q 000470 160 F 160 (1472)
Q Consensus 160 f 160 (1472)
|
T Consensus 769 y 769 (772)
T KOG1152|consen 769 Y 769 (772)
T ss_pred C
Confidence 5
No 467
>PTZ00421 coronin; Provisional
Probab=99.86 E-value=4.1e-20 Score=227.64 Aligned_cols=220 Identities=12% Similarity=0.181 Sum_probs=164.6
Q ss_pred eccccccceeEEEEcC-CCCEEEEEeCCCCEEEEeCCCCccc-cccccceEEeccCCceEEEEEecCC-CEEEEEeCCCc
Q 000470 1053 HLQEHCSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLEKD-ISFRSRLTYHLEGSRALCTMMLRHS-AQVVVGACDGI 1129 (1472)
Q Consensus 1053 ~l~~H~~~V~~lafsp-d~~~laSgS~DGtVkvWD~~~~e~~-~~~~~~~t~~~~~~~I~~v~f~~~~-~~las~s~DG~ 1129 (1472)
.+.+|.+.|++++|+| ++.+|||||.||+|+|||+.+.... .......++.+|...|.+++|+|++ +.|++|+.||+
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 4789999999999999 8889999999999999999764311 1112445678899999999999975 79999999999
Q ss_pred EEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCc
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1209 (1472)
Q Consensus 1130 I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~ 1209 (1472)
|+|||+.+.. .... ...+...+..+.|+|+ +..|++++.||.|++||+|+++.+.++.. |.
T Consensus 150 VrIWDl~tg~-------------~~~~-l~~h~~~V~sla~spd---G~lLatgs~Dg~IrIwD~rsg~~v~tl~~--H~ 210 (493)
T PTZ00421 150 VNVWDVERGK-------------AVEV-IKCHSDQITSLEWNLD---GSLLCTTSKDKKLNIIDPRDGTIVSSVEA--HA 210 (493)
T ss_pred EEEEECCCCe-------------EEEE-EcCCCCceEEEEEECC---CCEEEEecCCCEEEEEECCCCcEEEEEec--CC
Confidence 9999997311 1111 2245567889999998 77999999999999999999998877765 55
Q ss_pred cc-eEEEEEcCCCCEEEEEe----CCCcEEEEECCCCc-ccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEE-c
Q 000470 1210 GY-VSSLVTGPCGNWFVSGS----SRGVLTLWDLRFLV-PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA-G 1282 (1472)
Q Consensus 1210 g~-Itsl~~sp~g~~LvsGs----sdG~I~lWDlr~~~-~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas-~ 1282 (1472)
+. +..+.|.+++..+++++ .||.|++||+|... ++........ ....+.++++++ .++++++ +
T Consensus 211 ~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~-~~~~~~~~d~d~---------~~L~lggkg 280 (493)
T PTZ00421 211 SAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQS-SALFIPFFDEDT---------NLLYIGSKG 280 (493)
T ss_pred CCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCC-CceEEEEEcCCC---------CEEEEEEeC
Confidence 43 45677888877776543 47999999999754 3333332222 222333335544 4777776 6
Q ss_pred CCeEEEEEcCCCeEEEEEe
Q 000470 1283 CNEVSLWNAENGSCHQVLR 1301 (1472)
Q Consensus 1283 dg~V~VWDl~t~~~~~~l~ 1301 (1472)
|+.|++||+.+++......
T Consensus 281 Dg~Iriwdl~~~~~~~~~~ 299 (493)
T PTZ00421 281 EGNIRCFELMNERLTFCSS 299 (493)
T ss_pred CCeEEEEEeeCCceEEEee
Confidence 9999999999988765543
No 468
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.86 E-value=9.1e-21 Score=202.05 Aligned_cols=310 Identities=16% Similarity=0.234 Sum_probs=210.8
Q ss_pred cccccceeEEEEcC-CCCEEEEEeCCCCEEEEeCCCCcc----ccccccce-----EEeccCCceEEEEEec-CCCEEEE
Q 000470 1055 QEHCSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLEK----DISFRSRL-----TYHLEGSRALCTMMLR-HSAQVVV 1123 (1472)
Q Consensus 1055 ~~H~~~V~~lafsp-d~~~laSgS~DGtVkvWD~~~~e~----~~~~~~~~-----t~~~~~~~I~~v~f~~-~~~~las 1123 (1472)
.-|.+.||++.+.+ .|++++||+.||.+.|||++.... ....+..+ .-.+|.-.|.++.|.| +...|.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 34889999999987 689999999999999999986441 11122222 2235666899999999 5667888
Q ss_pred EeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCcccee
Q 000470 1124 GACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1203 (1472)
Q Consensus 1124 ~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l 1203 (1472)
++.|.+++|||..+.. ..+.......|...+++|-..+.-.+++|+.+-.|++.|+.+|....+|
T Consensus 120 sSFDhtlKVWDtnTlQ---------------~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~L 184 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQ---------------EAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTL 184 (397)
T ss_pred ccccceEEEeecccce---------------eeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeee
Confidence 9999999999998521 1222333455666677776443347888999999999999999999999
Q ss_pred ecCCCccceEEEEEcCCCCE-EEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEc
Q 000470 1204 KAIPEEGYVSSLVTGPCGNW-FVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG 1282 (1472)
Q Consensus 1204 ~~~~h~g~Itsl~~sp~g~~-LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~ 1282 (1472)
.+ |.+.|.++.|+|...| |++|+.||.|++||+|..
T Consensus 185 sG--Hr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRra----------------------------------------- 221 (397)
T KOG4283|consen 185 SG--HRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRA----------------------------------------- 221 (397)
T ss_pred cc--ccCceEEEEeccCceeEEEecCCCceEEEEEeecc-----------------------------------------
Confidence 87 9999999999998887 679999999999999831
Q ss_pred CCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCC
Q 000470 1283 CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG 1362 (1472)
Q Consensus 1283 dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~ 1362 (1472)
.|.+.+.|...++....+. ..+.|...|..++|..+
T Consensus 222 sgcf~~lD~hn~k~~p~~~--------------------------------------------~n~ah~gkvngla~tSd 257 (397)
T KOG4283|consen 222 SGCFRVLDQHNTKRPPILK--------------------------------------------TNTAHYGKVNGLAWTSD 257 (397)
T ss_pred cceeEEeecccCccCcccc--------------------------------------------ccccccceeeeeeeccc
Confidence 1112233333322111111 12456668999999999
Q ss_pred C-cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCC
Q 000470 1363 G-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGC 1441 (1472)
Q Consensus 1363 g-~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1441 (1472)
| .++++|.|.++|+|+..+++.+..-.|+-.......+-...+....-.|+--.... .+.--+..+......+..
T Consensus 258 ~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~----~lall~~~sgs~ir~l~~ 333 (397)
T KOG4283|consen 258 ARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDG----SLALLNLLEGSFVRRLST 333 (397)
T ss_pred chhhhhccCccceEEeecccCcccccccccccccccccceEEEeecccceEEEEecCC----eEEEEEccCceEEEeeec
Confidence 8 78899999999999999998876666654322111111222222222222111100 000000111223345667
Q ss_pred CccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000470 1442 HRDSILSLGSVKLNQRLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1442 H~d~I~~va~~~~~~~~LvS~s~DG~IkVW 1471 (1472)
|...|.+. .+.++..-..++++||.|..|
T Consensus 334 h~k~i~c~-~~~~~fq~~~tg~~d~ni~~w 362 (397)
T KOG4283|consen 334 HLKRINCA-AYRPDFEQCFTGDMNGNIYMW 362 (397)
T ss_pred ccceeeEE-eecCchhhhhccccCCccccc
Confidence 98888877 488888889999999999888
No 469
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.86 E-value=7e-22 Score=232.25 Aligned_cols=195 Identities=16% Similarity=0.137 Sum_probs=159.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|.|||++++|++..+ ..+.||||+++ |+|.++|.+ ++.|-......++.||+.|+.||.++++|||||...|+|+-
T Consensus 168 L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla 246 (1039)
T KOG0199|consen 168 LQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA 246 (1039)
T ss_pred ccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec
Confidence 679999999999988 77899999999 899999987 45578888999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeec-cCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFD-TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~-~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+...|||+|||+.+.....++ .|.+. ...-...|.|||.+. ...++.++|+|++|++|||||++
T Consensus 247 sprtVKI~DFGLmRaLg~ned-----~Yvm~p~rkvPfAWCaPEsLr----------h~kFShaSDvWmyGVTiWEMFty 311 (1039)
T KOG0199|consen 247 SPRTVKICDFGLMRALGENED-----MYVMAPQRKVPFAWCAPESLR----------HRKFSHASDVWMYGVTIWEMFTY 311 (1039)
T ss_pred ccceeeeecccceeccCCCCc-----ceEecCCCcCcccccCHhHhc----------cccccccchhhhhhhhHHhhhcc
Confidence 999999999999987754333 22222 223355699999765 45789999999999999999996
Q ss_pred -CCCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 -VPFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 -~~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+.||.+-.-..+ .+........-++.+++++.+++.+||..+|.+||++..+.++
T Consensus 312 GEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 312 GEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred CCCCCCCCCHHHHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 888865443333 2322222334566788999999999999999999999999865
No 470
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.86 E-value=7.4e-21 Score=199.66 Aligned_cols=243 Identities=15% Similarity=0.238 Sum_probs=189.4
Q ss_pred cccceeEEEEcCCCC-EEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEec-CCCEEEEEeCCCcEEEEE
Q 000470 1057 HCSAVNEIAISHDHS-FFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR-HSAQVVVGACDGIIHMFS 1134 (1472)
Q Consensus 1057 H~~~V~~lafspd~~-~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~-~~~~las~s~DG~I~vwd 1134 (1472)
-.+.+..++|++... .+++|+.||+++|||....+ .+...++.|...|.++.|.+ ++..++++|.||+|++|+
T Consensus 59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s-----~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~ 133 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPS-----KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWD 133 (311)
T ss_pred cccceeEeeecCCCcceEEEEecCceEEEeccCCCC-----cchhHHHhhhhheEEeccccccceeEEeeccCCceEeec
Confidence 457899999998664 78899999999999965443 36677888999999999998 567788999999999999
Q ss_pred ccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEE
Q 000470 1135 VDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSS 1214 (1472)
Q Consensus 1135 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Its 1214 (1472)
..... .++. ..++..+|....|+|.. ++.+++++.||.+++||+|.......++. |...|.|
T Consensus 134 ~~r~~-------------Sv~T-f~gh~~~Iy~a~~sp~~--~nlfas~Sgd~~l~lwdvr~~gk~~~i~a--h~~Eil~ 195 (311)
T KOG0277|consen 134 PNRPN-------------SVQT-FNGHNSCIYQAAFSPHI--PNLFASASGDGTLRLWDVRSPGKFMSIEA--HNSEILC 195 (311)
T ss_pred CCCCc-------------ceEe-ecCCccEEEEEecCCCC--CCeEEEccCCceEEEEEecCCCceeEEEe--ccceeEe
Confidence 86211 1122 34578889999999986 45999999999999999998644334544 7789999
Q ss_pred EEEcC-CCCEEEEEeCCCcEEEEECCCCc-ccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcC
Q 000470 1215 LVTGP-CGNWFVSGSSRGVLTLWDLRFLV-PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1292 (1472)
Q Consensus 1215 l~~sp-~g~~LvsGssdG~I~lWDlr~~~-~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~ 1292 (1472)
+.|+. +.+.|+||+.|+.|++||+|... ++..+ .+|.-.|+++.+ +|... ..+++++.|-++++||.+
T Consensus 196 cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL-~gh~~AVRkvk~-Sph~~--------~lLaSasYDmT~riw~~~ 265 (311)
T KOG0277|consen 196 CDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFEL-NGHGLAVRKVKF-SPHHA--------SLLASASYDMTVRIWDPE 265 (311)
T ss_pred ecccccCCcEEEecCCCceEEEEehhhccccceee-cCCceEEEEEec-Ccchh--------hHhhhccccceEEecccc
Confidence 99998 66889999999999999999754 44444 457778999998 88654 478899999999999988
Q ss_pred CCe-EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCC--CCcEEEcc
Q 000470 1293 NGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP--GGDLLTGG 1369 (1472)
Q Consensus 1293 t~~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p--~g~llTgg 1369 (1472)
.+. ++++.. .|..-|..+.|++ .+.++++|
T Consensus 266 ~~ds~~e~~~-----------------------------------------------~HtEFv~g~Dws~~~~~~vAs~g 298 (311)
T KOG0277|consen 266 RQDSAIETVD-----------------------------------------------HHTEFVCGLDWSLFDPGQVASTG 298 (311)
T ss_pred cchhhhhhhh-----------------------------------------------ccceEEeccccccccCceeeecc
Confidence 543 222221 1222466677765 35899999
Q ss_pred CCCeEEEEeC
Q 000470 1370 TDLKIRRWDH 1379 (1472)
Q Consensus 1370 ~Dg~IrlWDl 1379 (1472)
.|..+++|+.
T Consensus 299 WDe~l~Vw~p 308 (311)
T KOG0277|consen 299 WDELLYVWNP 308 (311)
T ss_pred cccceeeecc
Confidence 9999999983
No 471
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.86 E-value=1.9e-21 Score=220.50 Aligned_cols=255 Identities=17% Similarity=0.270 Sum_probs=194.7
Q ss_pred CCccc--ccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCC-
Q 000470 1042 SGWRP--RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS- 1118 (1472)
Q Consensus 1042 ~~W~p--~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~- 1118 (1472)
..|+- .|.+++++.+|..+|..++|+++|..|.|+|.|+++|+||+.++.. ...++. +..++|+.|.|++
T Consensus 240 klW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~------~~~f~~-~~~~~cvkf~pd~~ 312 (503)
T KOG0282|consen 240 KLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQV------LSRFHL-DKVPTCVKFHPDNQ 312 (503)
T ss_pred EEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceE------EEEEec-CCCceeeecCCCCC
Confidence 46873 5899999999999999999999999999999999999999999873 233332 3458999999987
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
+.|++|+.|+.|+.||++... -+..++.+-+ .+..+.|-++ +..+++++.|+++++|+.+.+-
T Consensus 313 n~fl~G~sd~ki~~wDiRs~k-------------vvqeYd~hLg-~i~~i~F~~~---g~rFissSDdks~riWe~~~~v 375 (503)
T KOG0282|consen 313 NIFLVGGSDKKIRQWDIRSGK-------------VVQEYDRHLG-AILDITFVDE---GRRFISSSDDKSVRIWENRIPV 375 (503)
T ss_pred cEEEEecCCCcEEEEeccchH-------------HHHHHHhhhh-heeeeEEccC---CceEeeeccCccEEEEEcCCCc
Confidence 889999999999999998411 2333443334 4555668887 7799999999999999999887
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCC--cccceEeccccCC--ceeEEeecCCCCCccccCCC
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL--VPVNSWQYSQVCP--IEKMCLFVPPPNAAVSTTAR 1274 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~--~~i~s~~~~~~~~--I~~l~~~~p~~~~~~~~~~~ 1274 (1472)
.+.-.. ..+.....|+..+|++.|+++-+-|..|.++.+.-. .-.+..-.+|..+ -.++.| +| +|
T Consensus 376 ~ik~i~-~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~f-Sp---------DG 444 (503)
T KOG0282|consen 376 PIKNIA-DPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDF-SP---------DG 444 (503)
T ss_pred cchhhc-chhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEE-cC---------CC
Confidence 665333 234557889999999999999999999999986432 1111111122222 223344 55 45
Q ss_pred CEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCc
Q 000470 1275 PLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1354 (1472)
Q Consensus 1275 ~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1354 (1472)
.+|++|.++|.+.+||..+.+....+. .|...+
T Consensus 445 ~~l~SGdsdG~v~~wdwkt~kl~~~lk-----------------------------------------------ah~~~c 477 (503)
T KOG0282|consen 445 RTLCSGDSDGKVNFWDWKTTKLVSKLK-----------------------------------------------AHDQPC 477 (503)
T ss_pred CeEEeecCCccEEEeechhhhhhhccc-----------------------------------------------cCCcce
Confidence 699999999999999998866544443 233368
Q ss_pred eEeccCCCC--cEEEccCCCeEEEEe
Q 000470 1355 RSLLPLPGG--DLLTGGTDLKIRRWD 1378 (1472)
Q Consensus 1355 ~sl~~~p~g--~llTgg~Dg~IrlWD 1378 (1472)
..+.|+|.. .++|||.||.|++||
T Consensus 478 i~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 478 IGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred EEEEecCCCcceeEecccCceeEecC
Confidence 889999976 899999999999997
No 472
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=4.5e-20 Score=198.73 Aligned_cols=304 Identities=15% Similarity=0.240 Sum_probs=204.2
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCcccccccc-ceEEeccCCceEEEEEecCCCEEEE-EeCC
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRS-RLTYHLEGSRALCTMMLRHSAQVVV-GACD 1127 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~-~~t~~~~~~~I~~v~f~~~~~~las-~s~D 1127 (1472)
.++.|++|.+.|++++||.||++|||++.|++|+|||+++.+... .++ +...... -.+.+.|.|+...+++ +...
T Consensus 78 ~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~e-Hr~~R~nve~d--hpT~V~FapDc~s~vv~~~~g 154 (420)
T KOG2096|consen 78 NVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKE-HRCIRQNVEYD--HPTRVVFAPDCKSVVVSVKRG 154 (420)
T ss_pred hhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhh-hhHhhccccCC--CceEEEECCCcceEEEEEccC
Confidence 467899999999999999999999999999999999999865221 121 1222221 3688999999776555 5556
Q ss_pred CcEEEEEccccccCCCccccccCcccceeec-----CCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccce
Q 000470 1128 GIIHMFSVDHISRGLGNVEKYSGISDIKKKD-----TKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWT 1202 (1472)
Q Consensus 1128 G~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~ 1202 (1472)
.++++|....... |.. + .....++ ..+...+-.+-...+ +.++++++.|..|.+||++ |+.+.+
T Consensus 155 ~~l~vyk~~K~~d--G~~---~--~~~v~~D~~~f~~kh~v~~i~iGiA~~---~k~imsas~dt~i~lw~lk-Gq~L~~ 223 (420)
T KOG2096|consen 155 NKLCVYKLVKKTD--GSG---S--HHFVHIDNLEFERKHQVDIINIGIAGN---AKYIMSASLDTKICLWDLK-GQLLQS 223 (420)
T ss_pred CEEEEEEeeeccc--CCC---C--cccccccccccchhcccceEEEeecCC---ceEEEEecCCCcEEEEecC-Cceeee
Confidence 6799999873222 211 1 1111112 122322322333333 6799999999999999999 887776
Q ss_pred eecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCC------cccceEec-cccCCceeEEeecCCCCCccccCCCC
Q 000470 1203 LKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL------VPVNSWQY-SQVCPIEKMCLFVPPPNAAVSTTARP 1275 (1472)
Q Consensus 1203 l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~------~~i~s~~~-~~~~~I~~l~~~~p~~~~~~~~~~~~ 1275 (1472)
+.. ....-+..+++|+|+++++++-.--|++|..-|+ +..+.++. +|.+.|+..+| +|+..
T Consensus 224 idt--nq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aF-sn~S~--------- 291 (420)
T KOG2096|consen 224 IDT--NQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAF-SNSST--------- 291 (420)
T ss_pred ecc--ccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeee-CCCcc---------
Confidence 654 3444566789999999999999899999987543 33333332 46678888888 66554
Q ss_pred EEEEEEcCCeEEEEEcCC----CeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCc
Q 000470 1276 LIYVAAGCNEVSLWNAEN----GSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRL 1351 (1472)
Q Consensus 1276 ~l~vas~dg~V~VWDl~t----~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1351 (1472)
.+++++-||..++||+.- ++-...++... .|.... +.
T Consensus 292 r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~---------------~pl~aa-----------------------g~- 332 (420)
T KOG2096|consen 292 RAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGS---------------APLHAA-----------------------GS- 332 (420)
T ss_pred eeEEEecCCcEEEeeccceEecCCCchHhhcCC---------------cchhhc-----------------------CC-
Confidence 789999999999999852 11111111110 011110 00
Q ss_pred CCceEeccCCCCcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHH
Q 000470 1352 LGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVL 1431 (1472)
Q Consensus 1352 ~~V~sl~~~p~g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 1431 (1472)
.++ .+..+|+|.+++.+....+.++..++++.-- ++
T Consensus 333 ~p~-RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~--------------~~----------------------------- 368 (420)
T KOG2096|consen 333 EPV-RLELSPSGDSLAVSFGSDLKVFASEDGKDYP--------------EL----------------------------- 368 (420)
T ss_pred Cce-EEEeCCCCcEEEeecCCceEEEEcccCccch--------------hH-----------------------------
Confidence 123 6778899988877777789999877654311 00
Q ss_pred hhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000470 1432 AAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1432 ~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVW 1471 (1472)
-+.|.+.|++++ |+++|++++||+ |..++|.
T Consensus 369 -------e~~h~~~Is~is-~~~~g~~~atcG-dr~vrv~ 399 (420)
T KOG2096|consen 369 -------EDIHSTTISSIS-YSSDGKYIATCG-DRYVRVI 399 (420)
T ss_pred -------HHhhcCceeeEE-ecCCCcEEeeec-ceeeeee
Confidence 012999999995 999999999998 5555553
No 473
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.86 E-value=4e-20 Score=198.78 Aligned_cols=255 Identities=13% Similarity=0.176 Sum_probs=182.3
Q ss_pred cccceeEEEEcC-CCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q 000470 1057 HCSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSV 1135 (1472)
Q Consensus 1057 H~~~V~~lafsp-d~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv 1135 (1472)
..+.|.+|+||| ...+++.||.||+||+|+++..... .+ .....|.++|.+++|+.+|..+++|+.|+.+++||+
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~---~~-ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL 101 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQL---VP-KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDL 101 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcc---cc-hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEc
Confidence 357899999999 4557778999999999999864211 12 223457788999999999999999999999999999
Q ss_pred cccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEE
Q 000470 1136 DHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSL 1215 (1472)
Q Consensus 1136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl 1215 (1472)
.+. ...++ ..|..++..++|-+... ...|++|++|.+|+.||+|....+.++..+ +.+.
T Consensus 102 ~S~--------------Q~~~v-~~Hd~pvkt~~wv~~~~-~~cl~TGSWDKTlKfWD~R~~~pv~t~~LP---eRvY-- 160 (347)
T KOG0647|consen 102 ASG--------------QVSQV-AAHDAPVKTCHWVPGMN-YQCLVTGSWDKTLKFWDTRSSNPVATLQLP---ERVY-- 160 (347)
T ss_pred cCC--------------Ceeee-eecccceeEEEEecCCC-cceeEecccccceeecccCCCCeeeeeecc---ceee--
Confidence 841 12222 24566677777766521 348999999999999999999999888773 3344
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCcc-cceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCC
Q 000470 1216 VTGPCGNWFVSGSSRGVLTLWDLRFLVP-VNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENG 1294 (1472)
Q Consensus 1216 ~~sp~g~~LvsGssdG~I~lWDlr~~~~-i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~ 1294 (1472)
+.|-....+++++.+..|.++.|+.... .+....+-.-.++++.. ..+.. ..+.|+-.|.+.+..+..+
T Consensus 161 a~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~-f~d~~---------~~alGsiEGrv~iq~id~~ 230 (347)
T KOG0647|consen 161 AADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVAC-FQDKD---------GFALGSIEGRVAIQYIDDP 230 (347)
T ss_pred ehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEE-EecCC---------ceEeeeecceEEEEecCCC
Confidence 4444567899999999999999986543 33334344445677766 44433 3488999999999988876
Q ss_pred --eEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCC-CcEEEccCC
Q 000470 1295 --SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG-GDLLTGGTD 1371 (1472)
Q Consensus 1295 --~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~-g~llTgg~D 1371 (1472)
+.-..|+.+..... ..+....|++++|+|. |.|+|+|+|
T Consensus 231 ~~~~nFtFkCHR~~~~--------------------------------------~~~~VYaVNsi~FhP~hgtlvTaGsD 272 (347)
T KOG0647|consen 231 NPKDNFTFKCHRSTNS--------------------------------------VNDDVYAVNSIAFHPVHGTLVTAGSD 272 (347)
T ss_pred CccCceeEEEeccCCC--------------------------------------CCCceEEecceEeecccceEEEecCC
Confidence 22334443221000 0011236899999995 599999999
Q ss_pred CeEEEEeCCCCCC
Q 000470 1372 LKIRRWDHCSPGR 1384 (1472)
Q Consensus 1372 g~IrlWDl~~~~~ 1384 (1472)
|++.|||-+...+
T Consensus 273 Gtf~FWDkdar~k 285 (347)
T KOG0647|consen 273 GTFSFWDKDARTK 285 (347)
T ss_pred ceEEEecchhhhh
Confidence 9999999765443
No 474
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.86 E-value=4.2e-20 Score=206.54 Aligned_cols=210 Identities=16% Similarity=0.298 Sum_probs=176.5
Q ss_pred cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEe
Q 000470 1046 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1125 (1472)
Q Consensus 1046 p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s 1125 (1472)
|.+++++.|.||.-.|+.+.|+|+...++++|.|..++||...... .......|.++|+.+..+|+|.+|++++
T Consensus 249 ~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s------~~~~~~~h~~~V~~ls~h~tgeYllsAs 322 (506)
T KOG0289|consen 249 PSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS------EPTSSRPHEEPVTGLSLHPTGEYLLSAS 322 (506)
T ss_pred chhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccccc------CccccccccccceeeeeccCCcEEEEec
Confidence 7789999999999999999999999999999999999999987543 3344567889999999999999999999
Q ss_pred CCCcEEEEEccccccCCCccccccCcccceeecC-CCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceee
Q 000470 1126 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDT-KEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK 1204 (1472)
Q Consensus 1126 ~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~ 1204 (1472)
.||+.-+.|+.... .+..... ..+..+++..|+|| |.++.+|+.||.|++||+..+..+..+.
T Consensus 323 ~d~~w~Fsd~~~g~-------------~lt~vs~~~s~v~~ts~~fHpD---gLifgtgt~d~~vkiwdlks~~~~a~Fp 386 (506)
T KOG0289|consen 323 NDGTWAFSDISSGS-------------QLTVVSDETSDVEYTSAAFHPD---GLIFGTGTPDGVVKIWDLKSQTNVAKFP 386 (506)
T ss_pred CCceEEEEEccCCc-------------EEEEEeeccccceeEEeeEcCC---ceEEeccCCCceEEEEEcCCccccccCC
Confidence 99999999987311 1222222 23456788999999 8899999999999999999999888786
Q ss_pred cCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCC
Q 000470 1205 AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN 1284 (1472)
Q Consensus 1205 ~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg 1284 (1472)
+ |.++|+++.|+.+|.||++++.||.|++||||..+.++++......++..++| .+.+. ++++++.+
T Consensus 387 g--ht~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~f-D~SGt---------~L~~~g~~- 453 (506)
T KOG0289|consen 387 G--HTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSF-DQSGT---------YLGIAGSD- 453 (506)
T ss_pred C--CCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEE-cCCCC---------eEEeecce-
Confidence 5 99999999999999999999999999999999999999998877778999988 55554 67766444
Q ss_pred eEEEEEc
Q 000470 1285 EVSLWNA 1291 (1472)
Q Consensus 1285 ~V~VWDl 1291 (1472)
+.||-.
T Consensus 454 -l~Vy~~ 459 (506)
T KOG0289|consen 454 -LQVYIC 459 (506)
T ss_pred -eEEEEE
Confidence 444443
No 475
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.86 E-value=3.3e-20 Score=210.77 Aligned_cols=229 Identities=19% Similarity=0.222 Sum_probs=169.3
Q ss_pred cceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCcc-ccccccceEEeccCCceEEEEEecCCCEEEEEeC
Q 000470 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEK-DISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1126 (1472)
Q Consensus 1048 G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~-~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~ 1126 (1472)
+..-..|.+|+..|.++++.|.|..|+|||.|-+|++||...+.. ...++... ...+..|.++.|++.++.|++.+.
T Consensus 157 ~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~--P~E~h~i~sl~ys~Tg~~iLvvsg 234 (641)
T KOG0772|consen 157 GSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQ--PCETHQINSLQYSVTGDQILVVSG 234 (641)
T ss_pred ccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccC--cccccccceeeecCCCCeEEEEec
Confidence 345567889999999999999999999999999999999998763 22333322 234456999999999999999988
Q ss_pred CCcEEEEEccccccCCCccccccCcccceeec--CCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC-cccee
Q 000470 1127 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKD--TKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS-NTWTL 1203 (1472)
Q Consensus 1127 DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~-~~~~l 1203 (1472)
....+|+|-+... ...-.-|-.-++-+. ..|-..+++-+|+|.+ .+.+++++.||++++||+...+ ....+
T Consensus 235 ~aqakl~DRdG~~----~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~--k~~FlT~s~DgtlRiWdv~~~k~q~qVi 308 (641)
T KOG0772|consen 235 SAQAKLLDRDGFE----IVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDN--KEEFLTCSYDGTLRIWDVNNTKSQLQVI 308 (641)
T ss_pred CcceeEEccCCce----eeeeeccchhhhhhhccCCceeeeeccccccCc--ccceEEecCCCcEEEEecCCchhheeEE
Confidence 8899999876211 001111112222222 2355677888999996 4599999999999999997643 22333
Q ss_pred ec---CCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--ccceEeccccC--CceeEEeecCCCCCccccCCCCE
Q 000470 1204 KA---IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV--PVNSWQYSQVC--PIEKMCLFVPPPNAAVSTTARPL 1276 (1472)
Q Consensus 1204 ~~---~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~--~i~s~~~~~~~--~I~~l~~~~p~~~~~~~~~~~~~ 1276 (1472)
+. .+..-.+++.+|+|+|.|+++|..||.|.+||.+... +...+...|.. .|+++.| ++++ ++
T Consensus 309 k~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~F-S~dg---------~~ 378 (641)
T KOG0772|consen 309 KTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISF-SYDG---------NY 378 (641)
T ss_pred eeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEe-cccc---------ch
Confidence 32 2234468999999999999999999999999986543 33334444544 7999988 6655 48
Q ss_pred EEEEEcCCeEEEEEcCCC
Q 000470 1277 IYVAAGCNEVSLWNAENG 1294 (1472)
Q Consensus 1277 l~vas~dg~V~VWDl~t~ 1294 (1472)
+++-+.|+.++|||++..
T Consensus 379 LlSRg~D~tLKvWDLrq~ 396 (641)
T KOG0772|consen 379 LLSRGFDDTLKVWDLRQF 396 (641)
T ss_pred hhhccCCCceeeeecccc
Confidence 999999999999999864
No 476
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=5.4e-20 Score=218.12 Aligned_cols=258 Identities=18% Similarity=0.245 Sum_probs=206.8
Q ss_pred CCccc-ccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEec-cCCceEEEEEecCCC
Q 000470 1042 SGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHL-EGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1042 ~~W~p-~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~-~~~~I~~v~f~~~~~ 1119 (1472)
-.|+. .|....-..-++..|+++.|+++|.+||.|-.+|+|.|||.....+. .++.+ |..+|-+++|. +.
T Consensus 200 ylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~------~~~~~~h~~rvg~laW~--~~ 271 (484)
T KOG0305|consen 200 YLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKT------RTLRGSHASRVGSLAWN--SS 271 (484)
T ss_pred EEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhcccc------ccccCCcCceeEEEecc--Cc
Confidence 36884 56644444444899999999999999999999999999999876533 34445 88899999997 77
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~ 1199 (1472)
.+.+|+.||.|..+|++... .... ...+|...|+.+.|+++ +..+++|+.|+.+.+||......
T Consensus 272 ~lssGsr~~~I~~~dvR~~~------------~~~~-~~~~H~qeVCgLkws~d---~~~lASGgnDN~~~Iwd~~~~~p 335 (484)
T KOG0305|consen 272 VLSSGSRDGKILNHDVRISQ------------HVVS-TLQGHRQEVCGLKWSPD---GNQLASGGNDNVVFIWDGLSPEP 335 (484)
T ss_pred eEEEecCCCcEEEEEEecch------------hhhh-hhhcccceeeeeEECCC---CCeeccCCCccceEeccCCCccc
Confidence 89999999999999998421 1111 24467788999999999 88999999999999999988888
Q ss_pred cceeecCCCccceEEEEEcC-CCCEEEEE--eCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCE
Q 000470 1200 TWTLKAIPEEGYVSSLVTGP-CGNWFVSG--SSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPL 1276 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsl~~sp-~g~~LvsG--ssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~ 1276 (1472)
..++.. |.+.|..++|+| ....|++| +.|++|++||..++..+..... .+.|..|.| ++... -
T Consensus 336 ~~~~~~--H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt--gsQVcsL~W-sk~~k---------E 401 (484)
T KOG0305|consen 336 KFTFTE--HTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDT--GSQVCSLIW-SKKYK---------E 401 (484)
T ss_pred cEEEec--cceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccccc--CCceeeEEE-cCCCC---------E
Confidence 877776 999999999999 55788876 4699999999999999887664 457999999 66553 4
Q ss_pred EEEEEc--CCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCc
Q 000470 1277 IYVAAG--CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1354 (1472)
Q Consensus 1277 l~vas~--dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1354 (1472)
++++.| ++.|.||+..+.+....+. +|...|
T Consensus 402 i~sthG~s~n~i~lw~~ps~~~~~~l~-----------------------------------------------gH~~RV 434 (484)
T KOG0305|consen 402 LLSTHGYSENQITLWKYPSMKLVAELL-----------------------------------------------GHTSRV 434 (484)
T ss_pred EEEecCCCCCcEEEEeccccceeeeec-----------------------------------------------CCccee
Confidence 566554 5789999998865544443 455568
Q ss_pred eEeccCCCC-cEEEccCCCeEEEEeCCCCCC
Q 000470 1355 RSLLPLPGG-DLLTGGTDLKIRRWDHCSPGR 1384 (1472)
Q Consensus 1355 ~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~ 1384 (1472)
..++++|+| .++||+.|.++|||++-....
T Consensus 435 l~la~SPdg~~i~t~a~DETlrfw~~f~~~~ 465 (484)
T KOG0305|consen 435 LYLALSPDGETIVTGAADETLRFWNLFDERP 465 (484)
T ss_pred EEEEECCCCCEEEEecccCcEEeccccCCCC
Confidence 999999998 888999999999999876533
No 477
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.85 E-value=4.7e-21 Score=206.64 Aligned_cols=156 Identities=20% Similarity=0.152 Sum_probs=120.1
Q ss_pred CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCcee
Q 000470 28 NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 106 (1472)
Q Consensus 28 gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~ 106 (1472)
|+|.+++..+ ..+++.+++.|+.||+.||+|||+++ ||+|||++.++.+++ ||.++....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~----------- 61 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP----------- 61 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc-----------
Confidence 7899999864 45999999999999999999999998 999999999999999 998875421
Q ss_pred eccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchH-----HHHHHhcCCCCCc---c
Q 000470 107 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-----LLAYRRGQYDPSQ---H 178 (1472)
Q Consensus 107 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-----~~~~~~~~~~~~~---~ 178 (1472)
....|++.|+|||.+. +..++.++||||+||++|||++|++||.... +............ .
T Consensus 62 -~~~~g~~~y~aPE~~~----------~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (176)
T smart00750 62 -EQSRVDPYFMAPEVIQ----------GQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRS 130 (176)
T ss_pred -ccCCCcccccChHHhc----------CCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccc
Confidence 1124688999999875 3467889999999999999999988885432 1112111111100 0
Q ss_pred cCCCCCH--HHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 179 LEKIPDS--GIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 179 l~~~~~~--~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.+...+. .++++|.+||..||++||++.|+++|.+
T Consensus 131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 131 NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCR 167 (176)
T ss_pred cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 1111122 6999999999999999999999999954
No 478
>PTZ00420 coronin; Provisional
Probab=99.85 E-value=2.5e-19 Score=221.28 Aligned_cols=202 Identities=13% Similarity=0.133 Sum_probs=146.5
Q ss_pred EEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC-CCEEEEEeCCCcEEEEEccccccCCCccccccCccc
Q 000470 1075 SASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH-SAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISD 1153 (1472)
Q Consensus 1075 SgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~-~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~ 1153 (1472)
+|+.+|.|++|+..+.. ....+.+|.+.|.+++|+|+ ++.||+|+.||+|+|||+...... ..... ..
T Consensus 49 gGG~~gvI~L~~~~r~~------~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~---~~~i~--~p 117 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKP------PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDES---VKEIK--DP 117 (568)
T ss_pred CCCceeEEEeeecCCCc------eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcc---ccccc--cc
Confidence 36778999999986532 44567889999999999996 789999999999999999731100 00000 01
Q ss_pred ceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcE
Q 000470 1154 IKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVL 1233 (1472)
Q Consensus 1154 ~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I 1233 (1472)
+ .....|...|.+++|+|++ ..++++++.||+|++||+++++....+. +.+.|++++|+|+|.+|++|+.||.|
T Consensus 118 ~-~~L~gH~~~V~sVaf~P~g--~~iLaSgS~DgtIrIWDl~tg~~~~~i~---~~~~V~SlswspdG~lLat~s~D~~I 191 (568)
T PTZ00420 118 Q-CILKGHKKKISIIDWNPMN--YYIMCSSGFDSFVNIWDIENEKRAFQIN---MPKKLSSLKWNIKGNLLSGTCVGKHM 191 (568)
T ss_pred e-EEeecCCCcEEEEEECCCC--CeEEEEEeCCCeEEEEECCCCcEEEEEe---cCCcEEEEEECCCCCEEEEEecCCEE
Confidence 1 1223456778999999983 2367899999999999999998776664 45789999999999999999999999
Q ss_pred EEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCC----eEEEEEcCC-CeEEEE
Q 000470 1234 TLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN----EVSLWNAEN-GSCHQV 1299 (1472)
Q Consensus 1234 ~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg----~V~VWDl~t-~~~~~~ 1299 (1472)
++||+|.+..+..+.. |...+....++. . .+++++.++++++.++ +|.+||+++ ++++..
T Consensus 192 rIwD~Rsg~~i~tl~g-H~g~~~s~~v~~-~----~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~ 256 (568)
T PTZ00420 192 HIIDPRKQEIASSFHI-HDGGKNTKNIWI-D----GLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVT 256 (568)
T ss_pred EEEECCCCcEEEEEec-ccCCceeEEEEe-e----eEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEE
Confidence 9999999988877654 444443332211 0 0123345778877663 799999985 444433
No 479
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.85 E-value=1.8e-20 Score=218.47 Aligned_cols=263 Identities=15% Similarity=0.268 Sum_probs=206.4
Q ss_pred cccccee---EEEEc-CCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEE
Q 000470 1056 EHCSAVN---EIAIS-HDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1131 (1472)
Q Consensus 1056 ~H~~~V~---~lafs-pd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~ 1131 (1472)
.|...|+ .+..+ |.+++|.|||.||++++|+.........-.....+..|..+|.++..+.+++.|++||.|-+|+
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK 98 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVK 98 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEE
Confidence 4556666 44444 4677899999999999999876443222223556778999999999999999999999999999
Q ss_pred EEEccccccCCCccccccCcccceeecCCCCcEEEEEEe-cCCCCCceEEEEEeCCCeEEEEeCCCCC--ccceeec---
Q 000470 1132 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNY-NTDNCASHMFMYSTQNCGIHLWDTRSNS--NTWTLKA--- 1205 (1472)
Q Consensus 1132 vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~d~~s~~~L~~at~dg~I~iwDlrt~~--~~~~l~~--- 1205 (1472)
+|+... . + .-+......|..-|.|+++ ..+ ...+++|+-|+.|.+||+.++. .+.++.+
T Consensus 99 ~W~~~~-~----------~-~~c~stir~H~DYVkcla~~ak~---~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~ 163 (735)
T KOG0308|consen 99 VWNAHK-D----------N-TFCMSTIRTHKDYVKCLAYIAKN---NELVASGGLDRKIFLWDINTGTATLVASFNNVTV 163 (735)
T ss_pred Eeeccc-C----------c-chhHhhhhcccchheeeeecccC---ceeEEecCCCccEEEEEccCcchhhhhhcccccc
Confidence 999872 1 0 0112223356677888877 444 5689999999999999999873 3322221
Q ss_pred ---C-CCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEE
Q 000470 1206 ---I-PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA 1281 (1472)
Q Consensus 1206 ---~-~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas 1281 (1472)
. ++...|.+++..+.|..+++|+..+.|++||.|+...+..++ +|..-|..+.. .++ |..+++++
T Consensus 164 ~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLr-GHTdNVr~ll~-~dD---------Gt~~ls~s 232 (735)
T KOG0308|consen 164 NSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLR-GHTDNVRVLLV-NDD---------GTRLLSAS 232 (735)
T ss_pred ccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeee-ccccceEEEEE-cCC---------CCeEeecC
Confidence 1 466789999999999999999999999999999999988888 67778888877 554 45899999
Q ss_pred cCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCC
Q 000470 1282 GCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP 1361 (1472)
Q Consensus 1282 ~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p 1361 (1472)
.||+|++||+...+|+.++..+.. +|+++..+|
T Consensus 233 SDgtIrlWdLgqQrCl~T~~vH~e-----------------------------------------------~VWaL~~~~ 265 (735)
T KOG0308|consen 233 SDGTIRLWDLGQQRCLATYIVHKE-----------------------------------------------GVWALQSSP 265 (735)
T ss_pred CCceEEeeeccccceeeeEEeccC-----------------------------------------------ceEEEeeCC
Confidence 999999999999999999875433 688888887
Q ss_pred CC-cEEEccCCCeEEEEeCCCCCCceEEeCC
Q 000470 1362 GG-DLLTGGTDLKIRRWDHCSPGRSYCICGP 1391 (1472)
Q Consensus 1362 ~g-~llTgg~Dg~IrlWDl~~~~~s~vv~g~ 1391 (1472)
+- .+.+||.||.|..=|+.++..+..++..
T Consensus 266 sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~ 296 (735)
T KOG0308|consen 266 SFTHVYSGGRDGNIYRTDLRNPAKSTLICKE 296 (735)
T ss_pred CcceEEecCCCCcEEecccCCchhheEeecC
Confidence 65 7889999999999999998777666654
No 480
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.85 E-value=1.3e-20 Score=209.67 Aligned_cols=252 Identities=19% Similarity=0.290 Sum_probs=200.9
Q ss_pred CCcccc-c--ceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCC
Q 000470 1042 SGWRPR-G--ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1042 ~~W~p~-G--~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~ 1118 (1472)
..|+-- + .++.+|.|--++|+++.|.++++.++++|.|+.+++|++.... .+.++.+|...|+++.|....
T Consensus 200 k~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r------~~~TLsGHtdkVt~ak~~~~~ 273 (459)
T KOG0288|consen 200 KLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLR------LRHTLSGHTDKVTAAKFKLSH 273 (459)
T ss_pred hhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchh------hhhhhcccccceeeehhhccc
Confidence 468843 2 3788999999999999999999999999999999999998754 667888999999999998877
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
..+++|+.|.+|++||+.. .. +.+.+.. +..+..+..++ ..++++-.|++|++||+|+..
T Consensus 274 ~~vVsgs~DRtiK~WDl~k-~~------------C~kt~l~--~S~cnDI~~~~-----~~~~SgH~DkkvRfwD~Rs~~ 333 (459)
T KOG0288|consen 274 SRVVSGSADRTIKLWDLQK-AY------------CSKTVLP--GSQCNDIVCSI-----SDVISGHFDKKVRFWDIRSAD 333 (459)
T ss_pred cceeeccccchhhhhhhhh-hh------------eeccccc--cccccceEecc-----eeeeecccccceEEEeccCCc
Confidence 7799999999999999973 11 1111111 11112222222 277888899999999999999
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccc---cCCceeEEeecCCCCCccccCCCC
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ---VCPIEKMCLFVPPPNAAVSTTARP 1275 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~---~~~I~~l~~~~p~~~~~~~~~~~~ 1275 (1472)
+....+. +|.|+++..+++|..+++++.|.++.+.|+|+......+.... .+..++++| +|+ +.
T Consensus 334 ~~~sv~~---gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvf-Spd---------~~ 400 (459)
T KOG0288|consen 334 KTRSVPL---GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVF-SPD---------GS 400 (459)
T ss_pred eeeEeec---CcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEE-CCC---------Cc
Confidence 8888776 6799999999999999999999999999999987766665432 223555555 554 55
Q ss_pred EEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCce
Q 000470 1276 LIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIR 1355 (1472)
Q Consensus 1276 ~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~ 1355 (1472)
++++|+.||.|.||++.+++|..++..... .++|+
T Consensus 401 YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s---------------------------------------------~~aI~ 435 (459)
T KOG0288|consen 401 YVAAGSADGSVYIWSVFTGKLEKVLSLSTS---------------------------------------------NAAIT 435 (459)
T ss_pred eeeeccCCCcEEEEEccCceEEEEeccCCC---------------------------------------------CcceE
Confidence 999999999999999999999888863221 12699
Q ss_pred EeccCCCC-cEEEccCCCeEEEE
Q 000470 1356 SLLPLPGG-DLLTGGTDLKIRRW 1377 (1472)
Q Consensus 1356 sl~~~p~g-~llTgg~Dg~IrlW 1377 (1472)
+++|+|.| .+++++.++.+++|
T Consensus 436 s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 436 SLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred EEEEcCCCchhhcccCCcceEec
Confidence 99999998 78899999999999
No 481
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.85 E-value=8e-21 Score=242.00 Aligned_cols=194 Identities=17% Similarity=0.237 Sum_probs=158.9
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
.||||+.+.+++..+...++|+||+. |+|.++++.+. .|+..+...+++||+.|++||++.++
T Consensus 360 ~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~ 439 (609)
T KOG0200|consen 360 KHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPC 439 (609)
T ss_pred CCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 59999999999999999999999999 89999998754 48899999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceee-ccCCCCc--cccCcccccccCCccccccCCCCCccc
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFF-DTGGKRL--CYLAPERFYEHGGEMQVAQDAPLKPSM 141 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~-~~~~gt~--~Y~APE~~~~~~~~~~~~~~~~~t~~~ 141 (1472)
+||||-..|||++.+..+||+|||+++..... .++. ....++. .|||||.+. ...|+.++
T Consensus 440 vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~-------~~y~~~~~~~~LP~kWmApEsl~----------~~~ft~kS 502 (609)
T KOG0200|consen 440 VHRDLAARNVLITKNKVIKIADFGLARDHYNK-------DYYRTKSSAGTLPVKWMAPESLF----------DRVFTSKS 502 (609)
T ss_pred cchhhhhhhEEecCCCEEEEccccceeccCCC-------CceEecCCCCccceeecCHHHhc----------cCcccccc
Confidence 99999999999999999999999999854221 1122 2223323 499999775 35789999
Q ss_pred hHHHHHHHHHHHHhC-CCCCCc----hHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 142 DIFAVGCVIAELFLE-VPFFEL----SHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 142 DIwSlG~il~eLltg-~~pf~~----~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||||+|+++||+++. ..||.. ..+.++.+..+. ...|...++++.++++.||+.+|++||++.|+.+.+..
T Consensus 503 DVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r--~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 503 DVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNR--MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred hhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 999999999999984 888864 334333333332 23566678899999999999999999999999987443
No 482
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.85 E-value=7.7e-20 Score=207.18 Aligned_cols=278 Identities=15% Similarity=0.207 Sum_probs=206.2
Q ss_pred eeeccccccceeEEEEcCCCC-EEEEEeCCCCEEEEeCCCCccc----cccccceEEeccCCceEEEEEecC-CCEEEEE
Q 000470 1051 VAHLQEHCSAVNEIAISHDHS-FFVSASDDSTVKVWDSRKLEKD----ISFRSRLTYHLEGSRALCTMMLRH-SAQVVVG 1124 (1472)
Q Consensus 1051 V~~l~~H~~~V~~lafspd~~-~laSgS~DGtVkvWD~~~~e~~----~~~~~~~t~~~~~~~I~~v~f~~~-~~~las~ 1124 (1472)
+.+.-.|.+.|+++..-|... .+||++..|.|.|||..+-... ..+++.+++.+|...-++++|++. .-.+++|
T Consensus 117 i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~ 196 (422)
T KOG0264|consen 117 ISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSG 196 (422)
T ss_pred EEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeec
Confidence 344456999999999999665 7778889999999998764421 145666788888877888999985 4579999
Q ss_pred eCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceee
Q 000470 1125 ACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK 1204 (1472)
Q Consensus 1125 s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~ 1204 (1472)
+.|++|++||+..... ..+....+.+...|..+|.-++|++-. ...+++++.|+.+.+||+|+++......
T Consensus 197 ~~d~~i~lwdi~~~~~-------~~~~~~p~~~~~~h~~~VeDV~~h~~h--~~lF~sv~dd~~L~iwD~R~~~~~~~~~ 267 (422)
T KOG0264|consen 197 SDDHTICLWDINAESK-------EDKVVDPKTIFSGHEDVVEDVAWHPLH--EDLFGSVGDDGKLMIWDTRSNTSKPSHS 267 (422)
T ss_pred cCCCcEEEEecccccc-------CCccccceEEeecCCcceehhhccccc--hhhheeecCCCeEEEEEcCCCCCCCccc
Confidence 9999999999974221 122233455666788899999999975 4599999999999999999642222233
Q ss_pred cCCCccceEEEEEcCC-CCEEEEEeCCCcEEEEECCCCcc-cceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEc
Q 000470 1205 AIPEEGYVSSLVTGPC-GNWFVSGSSRGVLTLWDLRFLVP-VNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG 1282 (1472)
Q Consensus 1205 ~~~h~g~Itsl~~sp~-g~~LvsGssdG~I~lWDlr~~~~-i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~ 1282 (1472)
...|.+.|+|++|+|. +..|++|++|++|.|||+|.... +.++. .|...|.++.| +|... ..+++++.
T Consensus 268 ~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e-~H~dev~~V~W-SPh~e--------tvLASSg~ 337 (422)
T KOG0264|consen 268 VKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFE-GHEDEVFQVEW-SPHNE--------TVLASSGT 337 (422)
T ss_pred ccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceecc-CCCcceEEEEe-CCCCC--------ceeEeccc
Confidence 3459999999999994 56788999999999999998654 44444 36778999999 88754 46788888
Q ss_pred CCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCC
Q 000470 1283 CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG 1362 (1472)
Q Consensus 1283 dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~ 1362 (1472)
|+.+.|||+..-.-.+. .... .+...+.+-.+.||...|..+.|+|+
T Consensus 338 D~rl~vWDls~ig~eq~--~eda-------------------------------~dgppEllF~HgGH~~kV~DfsWnp~ 384 (422)
T KOG0264|consen 338 DRRLNVWDLSRIGEEQS--PEDA-------------------------------EDGPPELLFIHGGHTAKVSDFSWNPN 384 (422)
T ss_pred CCcEEEEeccccccccC--hhhh-------------------------------ccCCcceeEEecCcccccccccCCCC
Confidence 99999999975221111 0000 00111222234688889999999998
Q ss_pred C--cEEEccCCCeEEEEeCC
Q 000470 1363 G--DLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1363 g--~llTgg~Dg~IrlWDl~ 1380 (1472)
. .++|..+|+.+.+|.+.
T Consensus 385 ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 385 EPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCeEEEEecCCceEEEeecc
Confidence 7 56699999999999976
No 483
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.84 E-value=4.7e-20 Score=208.17 Aligned_cols=284 Identities=16% Similarity=0.225 Sum_probs=216.5
Q ss_pred ccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q 000470 1056 EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSV 1135 (1472)
Q Consensus 1056 ~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv 1135 (1472)
.|..-|-.+..|...+.+.||+. |+|||||+...+. ....+.+.....+..|.++...|+|+.|++|+.-.++.|||+
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~-k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDL 494 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGN-KSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDL 494 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCC-CCccccccccCcccceeeeEecCCCceEEeccccceeeeeec
Confidence 58888888999998999999988 8999999986542 111222223334567999999999999999999999999999
Q ss_pred cccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEE
Q 000470 1136 DHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSL 1215 (1472)
Q Consensus 1136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl 1215 (1472)
.... ..+.......+-....++.+|| .++.+++..||.|.|||++....+..|++ |.+.+.|+
T Consensus 495 AapT------------prikaeltssapaCyALa~spD---akvcFsccsdGnI~vwDLhnq~~VrqfqG--htDGascI 557 (705)
T KOG0639|consen 495 AAPT------------PRIKAELTSSAPACYALAISPD---AKVCFSCCSDGNIAVWDLHNQTLVRQFQG--HTDGASCI 557 (705)
T ss_pred cCCC------------cchhhhcCCcchhhhhhhcCCc---cceeeeeccCCcEEEEEcccceeeecccC--CCCCceeE
Confidence 7311 0111111223345567788999 67999999999999999999999999987 89999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCe
Q 000470 1216 VTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGS 1295 (1472)
Q Consensus 1216 ~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~ 1295 (1472)
.++++|..|.+|+-|.+|++||+|.+..+....+ .+.|.++.. .|.+. |+++|-.++.|.|......+
T Consensus 558 dis~dGtklWTGGlDntvRcWDlregrqlqqhdF--~SQIfSLg~-cP~~d---------WlavGMens~vevlh~skp~ 625 (705)
T KOG0639|consen 558 DISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDF--SSQIFSLGY-CPTGD---------WLAVGMENSNVEVLHTSKPE 625 (705)
T ss_pred EecCCCceeecCCCccceeehhhhhhhhhhhhhh--hhhheeccc-CCCcc---------ceeeecccCcEEEEecCCcc
Confidence 9999999999999999999999999887766554 346777776 66554 99999999888887665432
Q ss_pred EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeE
Q 000470 1296 CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKI 1374 (1472)
Q Consensus 1296 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~I 1374 (1472)
.-+. .-|...|-++.|.+.| ++++.|.|+-+
T Consensus 626 kyql------------------------------------------------hlheScVLSlKFa~cGkwfvStGkDnlL 657 (705)
T KOG0639|consen 626 KYQL------------------------------------------------HLHESCVLSLKFAYCGKWFVSTGKDNLL 657 (705)
T ss_pred ceee------------------------------------------------cccccEEEEEEecccCceeeecCchhhh
Confidence 2111 1233468899999888 88899999999
Q ss_pred EEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeec
Q 000470 1375 RRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKL 1454 (1472)
Q Consensus 1375 rlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~ 1454 (1472)
..|.+-.+...+... -...|++. .++.
T Consensus 658 nawrtPyGasiFqsk----------------------------------------------------E~SsVlsC-DIS~ 684 (705)
T KOG0639|consen 658 NAWRTPYGASIFQSK----------------------------------------------------ESSSVLSC-DISF 684 (705)
T ss_pred hhccCccccceeecc----------------------------------------------------ccCcceee-eecc
Confidence 999765443322110 24568888 5899
Q ss_pred CCcEEEEEcCCceEEEc
Q 000470 1455 NQRLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1455 ~~~~LvS~s~DG~IkVW 1471 (1472)
+.++|||||-|...-||
T Consensus 685 ddkyIVTGSGdkkATVY 701 (705)
T KOG0639|consen 685 DDKYIVTGSGDKKATVY 701 (705)
T ss_pred CceEEEecCCCcceEEE
Confidence 99999999999776665
No 484
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.84 E-value=6.2e-21 Score=217.77 Aligned_cols=204 Identities=19% Similarity=0.170 Sum_probs=150.9
Q ss_pred CCCCCcceeeEEEEeCC----eEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCee
Q 000470 1 MSSTPCVHKKFWQETDK----AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK---------GICH 66 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~----~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~---------gIvH 66 (1472)
|.|+||++|+..-+... .++||++|-+ |+|.+||+.+ .+++.+...|+..+++||+|||+. .|+|
T Consensus 261 m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaH 339 (534)
T KOG3653|consen 261 MKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAH 339 (534)
T ss_pred ccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCcccc
Confidence 68999999999887655 8999999999 9999999886 489999999999999999999973 5999
Q ss_pred cCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHH
Q 000470 67 GDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 146 (1472)
Q Consensus 67 ~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSl 146 (1472)
||||..||||.+++...|+|||++.... +.....+. ....||..|||||++.+.-. .. +..--.++||||+
T Consensus 340 RDlkSkNVLvK~DlTccIaDFGLAl~~~-p~~~~~d~----~~qVGT~RYMAPEvLEgain---l~-d~~Afkr~DvYam 410 (534)
T KOG3653|consen 340 RDLKSKNVLVKNDLTCCIADFGLALRLE-PGKPQGDT----HGQVGTRRYMAPEVLEGAIN---LQ-DRDAFKRIDVYAM 410 (534)
T ss_pred ccccccceEEccCCcEEeeccceeEEec-CCCCCcch----hhhhhhhhhcCHHHHhhhcc---cc-cHHHHHHHHHHHH
Confidence 9999999999999999999999998764 22222221 23678999999999864311 01 1222357999999
Q ss_pred HHHHHHHHhCCC--------CCC------------chHHHHHH---hcCCCCCcccCCC-CCHHHHHHHHHhcccCcCCC
Q 000470 147 GCVIAELFLEVP--------FFE------------LSHLLAYR---RGQYDPSQHLEKI-PDSGIRKMILHMIQLEPELR 202 (1472)
Q Consensus 147 G~il~eLltg~~--------pf~------------~~~~~~~~---~~~~~~~~~l~~~-~~~~l~~LI~~mL~~dP~~R 202 (1472)
|.|+|||++... +|. ..++..+. +........+.+. .-.-+++.+..||..||+.|
T Consensus 411 gLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeAR 490 (534)
T KOG3653|consen 411 GLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEAR 490 (534)
T ss_pred HHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhh
Confidence 999999987522 221 11222221 1111111122222 22468999999999999999
Q ss_pred CCHHHHHHHhhc
Q 000470 203 FSAESYLQNYAA 214 (1472)
Q Consensus 203 psa~elL~~~~~ 214 (1472)
.||.-+.+++..
T Consensus 491 LTA~Cv~eR~~~ 502 (534)
T KOG3653|consen 491 LTAGCVEERMAE 502 (534)
T ss_pred hhhHHHHHHHHH
Confidence 999988877543
No 485
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.84 E-value=2.7e-19 Score=210.34 Aligned_cols=243 Identities=17% Similarity=0.293 Sum_probs=186.8
Q ss_pred cceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEE-EEEec-CCCEEEEEe
Q 000470 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALC-TMMLR-HSAQVVVGA 1125 (1472)
Q Consensus 1048 G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~-v~f~~-~~~~las~s 1125 (1472)
-++-+.+++|...|..+++. ++..+++||.||++++|+-...+ +-....+.++.+-|.+ +++.+ ++-.+++|+
T Consensus 4 Y~ls~~l~gH~~DVr~v~~~-~~~~i~s~sRd~t~~vw~~~~~~----~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~ 78 (745)
T KOG0301|consen 4 YKLSHELEGHKSDVRAVAVT-DGVCIISGSRDGTVKVWAKKGKQ----YLETHAFEGPKGFIANSICYAESDKGRLVVGG 78 (745)
T ss_pred ceeEEEeccCccchheeEec-CCeEEeecCCCCceeeeeccCcc----cccceecccCcceeeccceeccccCcceEeec
Confidence 35678899999999888875 45589999999999999975543 2233456666666666 88876 444699999
Q ss_pred CCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeec
Q 000470 1126 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1205 (1472)
Q Consensus 1126 ~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~ 1205 (1472)
.|++|.+|..... .+. .....|...|++++...+ + .+++|++|.++++|-. +++...+++
T Consensus 79 ~D~~i~v~~~~~~-------------~P~-~~LkgH~snVC~ls~~~~---~-~~iSgSWD~TakvW~~--~~l~~~l~g 138 (745)
T KOG0301|consen 79 MDTTIIVFKLSQA-------------EPL-YTLKGHKSNVCSLSIGED---G-TLISGSWDSTAKVWRI--GELVYSLQG 138 (745)
T ss_pred ccceEEEEecCCC-------------Cch-hhhhccccceeeeecCCc---C-ceEecccccceEEecc--hhhhcccCC
Confidence 9999999988631 111 122346666777765554 2 5999999999999976 455555655
Q ss_pred CCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000470 1206 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1285 (1472)
Q Consensus 1206 ~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~ 1285 (1472)
|...|++++.-|++ .++||+.|.+|++|.- ++.++++.. |..-|+.+++ .+.. .+++++.||.
T Consensus 139 --H~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~g-HtD~VRgL~v-l~~~----------~flScsNDg~ 201 (745)
T KOG0301|consen 139 --HTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSG-HTDCVRGLAV-LDDS----------HFLSCSNDGS 201 (745)
T ss_pred --cchheeeeeecCCC-cEEeccCcceeeeccC--Cchhhhhcc-chhheeeeEE-ecCC----------CeEeecCCce
Confidence 99999999999988 8999999999999985 677777776 7778999988 5543 3789999999
Q ss_pred EEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEec-cCCCCc
Q 000470 1286 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL-PLPGGD 1364 (1472)
Q Consensus 1286 V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~-~~p~g~ 1364 (1472)
|+.|++ +|+|+..+.. |..-|+++. .++++.
T Consensus 202 Ir~w~~-~ge~l~~~~g-----------------------------------------------htn~vYsis~~~~~~~ 233 (745)
T KOG0301|consen 202 IRLWDL-DGEVLLEMHG-----------------------------------------------HTNFVYSISMALSDGL 233 (745)
T ss_pred EEEEec-cCceeeeeec-----------------------------------------------cceEEEEEEecCCCCe
Confidence 999999 7888776652 333688888 556678
Q ss_pred EEEccCCCeEEEEeCC
Q 000470 1365 LLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1365 llTgg~Dg~IrlWDl~ 1380 (1472)
++|+|+||++|+|+..
T Consensus 234 Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 234 IVSTGEDRTLRIWKKD 249 (745)
T ss_pred EEEecCCceEEEeecC
Confidence 9999999999999976
No 486
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.84 E-value=1.1e-18 Score=179.30 Aligned_cols=260 Identities=18% Similarity=0.236 Sum_probs=195.4
Q ss_pred ceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC----CCEEEEE
Q 000470 1049 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH----SAQVVVG 1124 (1472)
Q Consensus 1049 ~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~----~~~las~ 1124 (1472)
.+-..-+.|++.|+|.+|||+|++++|||.|.+||+--.....++.+ -..+.+..|.+.|.+++|..+ +..++++
T Consensus 80 v~~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~-g~dle~nmhdgtirdl~fld~~~s~~~il~s~ 158 (350)
T KOG0641|consen 80 VLCKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNAT-GHDLEFNMHDGTIRDLAFLDDPESGGAILASA 158 (350)
T ss_pred EEeeeccccCccEEEEEecCccCeEEecCCCceEEEEeccccccccc-CcceeeeecCCceeeeEEecCCCcCceEEEec
Confidence 34445567999999999999999999999999999987654333222 245677888999999999864 4566665
Q ss_pred eCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceee
Q 000470 1125 ACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK 1204 (1472)
Q Consensus 1125 s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~ 1204 (1472)
+. |-.+||-.+. .+ | ..+..+..+.|.++..-.|+.- ++++|+.|.+|++||+|...++.++.
T Consensus 159 ga-gdc~iy~tdc-~~--g--------~~~~a~sghtghilalyswn~~-----m~~sgsqdktirfwdlrv~~~v~~l~ 221 (350)
T KOG0641|consen 159 GA-GDCKIYITDC-GR--G--------QGFHALSGHTGHILALYSWNGA-----MFASGSQDKTIRFWDLRVNSCVNTLD 221 (350)
T ss_pred CC-CcceEEEeec-CC--C--------CcceeecCCcccEEEEEEecCc-----EEEccCCCceEEEEeeeccceeeecc
Confidence 53 4444444432 11 1 1234455677888888878654 99999999999999999999998887
Q ss_pred cCCCc-----cceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEE
Q 000470 1205 AIPEE-----GYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1279 (1472)
Q Consensus 1205 ~~~h~-----g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~v 1279 (1472)
+..|. ..|.+++++|.|+.|++|-.|....+||+|-+.++..+. +|...|.++.| +|... ++++
T Consensus 222 ~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~-phsadir~vrf-sp~a~---------yllt 290 (350)
T KOG0641|consen 222 NDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFH-PHSADIRCVRF-SPGAH---------YLLT 290 (350)
T ss_pred CcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeC-CCccceeEEEe-CCCce---------EEEE
Confidence 76554 469999999999999999999999999999999998875 58888999998 77654 8999
Q ss_pred EEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEecc
Q 000470 1280 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1359 (1472)
Q Consensus 1280 as~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1359 (1472)
++.|..|++-|+.. .....+.. -+ ...|...+-.+.|
T Consensus 291 ~syd~~ikltdlqg-dla~el~~--------------~v----------------------------v~ehkdk~i~~rw 327 (350)
T KOG0641|consen 291 CSYDMKIKLTDLQG-DLAHELPI--------------MV----------------------------VAEHKDKAIQCRW 327 (350)
T ss_pred ecccceEEEeeccc-chhhcCce--------------EE----------------------------EEeccCceEEEEe
Confidence 99999999999863 22111100 00 0112224567889
Q ss_pred CCCC-cEEEccCCCeEEEEeCC
Q 000470 1360 LPGG-DLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1360 ~p~g-~llTgg~Dg~IrlWDl~ 1380 (1472)
+|.. .+++.+.|+++.+|-+.
T Consensus 328 h~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 328 HPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred cCccceeeeccCcceEEEeccC
Confidence 9988 68899999999999753
No 487
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.84 E-value=1.8e-19 Score=212.86 Aligned_cols=268 Identities=15% Similarity=0.187 Sum_probs=218.8
Q ss_pred CCCccc-ccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC
Q 000470 1041 DSGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1041 ~~~W~p-~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~ 1119 (1472)
-..|+- +++++.++... .+.+..|-|.++++++|...|.+.|+|+....- .-+...|.+.|++++..|++.
T Consensus 396 ikiWn~~t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l------~Eti~AHdgaIWsi~~~pD~~ 467 (888)
T KOG0306|consen 396 IKIWNRDTLKCIRTITCG--YILASKFVPGDRYIVLGTKNGELQVFDLASASL------VETIRAHDGAIWSISLSPDNK 467 (888)
T ss_pred EEEEEccCcceeEEeccc--cEEEEEecCCCceEEEeccCCceEEEEeehhhh------hhhhhccccceeeeeecCCCC
Confidence 457985 59999999754 888999999999999999999999999987652 223457889999999999999
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~ 1199 (1472)
.+++||.|.+|++||........+.-.+.-++...+... -..-+-++.++|| +.+|+++=-|++|++|-+.+.+-
T Consensus 468 g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLe--l~ddvL~v~~Spd---gk~LaVsLLdnTVkVyflDtlKF 542 (888)
T KOG0306|consen 468 GFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLE--LEDDVLCVSVSPD---GKLLAVSLLDNTVKVYFLDTLKF 542 (888)
T ss_pred ceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEe--ccccEEEEEEcCC---CcEEEEEeccCeEEEEEecceee
Confidence 999999999999999874332112111221112222222 2446778899999 88999999999999999998876
Q ss_pred cceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEE
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1279 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~v 1279 (1472)
--++-+ |.-+|.|+.++|++..++|||.|..|++|-+.||.|-+++-. |...|.++.| .|... .+++
T Consensus 543 flsLYG--HkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fA-HdDSvm~V~F-~P~~~---------~FFt 609 (888)
T KOG0306|consen 543 FLSLYG--HKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFA-HDDSVMSVQF-LPKTH---------LFFT 609 (888)
T ss_pred eeeecc--cccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhc-ccCceeEEEE-cccce---------eEEE
Confidence 655554 899999999999999999999999999999999999998764 7788999999 77543 7899
Q ss_pred EEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEecc
Q 000470 1280 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1359 (1472)
Q Consensus 1280 as~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1359 (1472)
++-|+.|+-||-++.++.+.+. +|...|+|++.
T Consensus 610 ~gKD~kvKqWDg~kFe~iq~L~-----------------------------------------------~H~~ev~cLav 642 (888)
T KOG0306|consen 610 CGKDGKVKQWDGEKFEEIQKLD-----------------------------------------------GHHSEVWCLAV 642 (888)
T ss_pred ecCcceEEeechhhhhhheeec-----------------------------------------------cchheeeeeEE
Confidence 9999999999999988887775 23347999999
Q ss_pred CCCC-cEEEccCCCeEEEEeCCC
Q 000470 1360 LPGG-DLLTGGTDLKIRRWDHCS 1381 (1472)
Q Consensus 1360 ~p~g-~llTgg~Dg~IrlWDl~~ 1381 (1472)
.|+| +++|+|.|..||+|....
T Consensus 643 ~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 643 SPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred cCCCCeEEeccCCceeEeeeccC
Confidence 9998 888999999999998654
No 488
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.84 E-value=2.2e-20 Score=229.65 Aligned_cols=202 Identities=18% Similarity=0.143 Sum_probs=138.4
Q ss_pred CCcceeeEEEEe--------CCeEEEEecccC-CcHHHHHhCC------------------------CCCCHHHHHHHHH
Q 000470 4 TPCVHKKFWQET--------DKAAYLLRQYFF-NSLRDRLSTP------------------------PFLSLVEKKWLAF 50 (1472)
Q Consensus 4 pNIv~~~~~~~~--------~~~~~lV~Ey~~-gsL~d~l~~~------------------------~~l~~~~~~~i~~ 50 (1472)
++|+++++++.. +...|||+||++ ++|.+++... ..+++..++.++.
T Consensus 237 ~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ 316 (507)
T PLN03224 237 ASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMR 316 (507)
T ss_pred hhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHH
Confidence 445777777643 356899999999 6999988642 1235667889999
Q ss_pred HHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccc
Q 000470 51 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQ 130 (1472)
Q Consensus 51 Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~ 130 (1472)
|++.||.|||++||+||||||+|||++.++.+||+|||+++....... .. .....+++.|+|||.+........
T Consensus 317 ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~----~~--~~~g~~tp~Y~aPE~l~~~~~~~~ 390 (507)
T PLN03224 317 QVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN----FN--PLYGMLDPRYSPPEELVMPQSCPR 390 (507)
T ss_pred HHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc----cC--ccccCCCcceeChhhhcCCCCCCc
Confidence 999999999999999999999999999999999999999864421110 00 112234788999998863221100
Q ss_pred c------------ccCCCCCccchHHHHHHHHHHHHhCC-CCCCchHH------------HHHHhcC-CCCCcccCCCCC
Q 000470 131 V------------AQDAPLKPSMDIFAVGCVIAELFLEV-PFFELSHL------------LAYRRGQ-YDPSQHLEKIPD 184 (1472)
Q Consensus 131 ~------------~~~~~~t~~~DIwSlG~il~eLltg~-~pf~~~~~------------~~~~~~~-~~~~~~l~~~~~ 184 (1472)
. ........+.||||+||++|+|+++. +||..... ..++... ...........+
T Consensus 391 ~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s 470 (507)
T PLN03224 391 APAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNK 470 (507)
T ss_pred cchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccC
Confidence 0 00011223579999999999999984 46642111 1111100 011112233456
Q ss_pred HHHHHHHHHhcccCc---CCCCCHHHHHHH
Q 000470 185 SGIRKMILHMIQLEP---ELRFSAESYLQN 211 (1472)
Q Consensus 185 ~~l~~LI~~mL~~dP---~~Rpsa~elL~~ 211 (1472)
+..++|+.+||..+| .+|+|++|+|+|
T Consensus 471 ~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 471 EAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred hHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 789999999999876 689999999999
No 489
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.83 E-value=6.5e-21 Score=227.85 Aligned_cols=198 Identities=14% Similarity=0.093 Sum_probs=160.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
|.|||+++++++..... ..||+||++ |+|.|+++. +..+...+...|.+||++||.|||.++++||||-..||||.+
T Consensus 755 ldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVks 833 (1177)
T KOG1025|consen 755 LDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKS 833 (1177)
T ss_pred CCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecC
Confidence 58999999999998876 889999999 899999986 567999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
-+++|++|||+++.....+ ..+......-.+.|||=|.+. ...|+.++||||+|+++||++| |.
T Consensus 834 P~hvkitdfgla~ll~~d~-----~ey~~~~gK~pikwmale~i~----------~~~~thqSDVWsfGVtiWElmTFGa 898 (1177)
T KOG1025|consen 834 PNHVKITDFGLAKLLAPDE-----KEYSAPGGKVPIKWMALESIR----------IRKYTHQSDVWSFGVTIWELMTFGA 898 (1177)
T ss_pred CCeEEEEecchhhccCccc-----ccccccccccCcHHHHHHHhh----------ccCCCchhhhhhhhhhHHHHHhcCC
Confidence 9999999999998663222 222233333456688888664 4589999999999999999998 66
Q ss_pred CCCCchHHHHHHhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 158 PFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.|+..-...++...... .+..-|.+.+.++.-++.+||..|++.||+++++...+..
T Consensus 899 ~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~ 956 (1177)
T KOG1025|consen 899 KPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSR 956 (1177)
T ss_pred CccCCCCHHHhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHH
Confidence 66665444443322111 1234567888899999999999999999999999988653
No 490
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.83 E-value=4.5e-19 Score=191.71 Aligned_cols=269 Identities=19% Similarity=0.260 Sum_probs=193.8
Q ss_pred EEEEeCCCCEEEEeCCCCc------cccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccc
Q 000470 1073 FVSASDDSTVKVWDSRKLE------KDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVE 1146 (1472)
Q Consensus 1073 laSgS~DGtVkvWD~~~~e------~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~ 1146 (1472)
|+.|+....+-=+++.... +..++.+...+..|.++|++++. ++.++|+||.|.+|+|||+.... ..+
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~-qlg--- 77 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAV--SGPYVASGSSDETIHIYDMRKRK-QLG--- 77 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEe--cceeEeccCCCCcEEEEeccchh-hhc---
Confidence 5556666555555443211 22334567788899999999987 57899999999999999997311 111
Q ss_pred cccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEE
Q 000470 1147 KYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVS 1226 (1472)
Q Consensus 1147 ~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~Lvs 1226 (1472)
....|...++++.|.+... ...|++|+.||.|.+||.....++.+++. |.+.|+.++++|.|..-++
T Consensus 78 ----------~ll~HagsitaL~F~~~~S-~shLlS~sdDG~i~iw~~~~W~~~~slK~--H~~~Vt~lsiHPS~KLALs 144 (362)
T KOG0294|consen 78 ----------ILLSHAGSITALKFYPPLS-KSHLLSGSDDGHIIIWRVGSWELLKSLKA--HKGQVTDLSIHPSGKLALS 144 (362)
T ss_pred ----------ceeccccceEEEEecCCcc-hhheeeecCCCcEEEEEcCCeEEeeeecc--cccccceeEecCCCceEEE
Confidence 1224556677778887632 34899999999999999999999999987 8888999999999999999
Q ss_pred EeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCC
Q 000470 1227 GSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYD 1306 (1472)
Q Consensus 1227 GssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~ 1306 (1472)
-+.|+.+++|||-.++.-......+. -+.+.| .|.+. +++++ +.+.|-+|.+++.+....+. .
T Consensus 145 Vg~D~~lr~WNLV~Gr~a~v~~L~~~--at~v~w-~~~Gd---------~F~v~-~~~~i~i~q~d~A~v~~~i~---~- 207 (362)
T KOG0294|consen 145 VGGDQVLRTWNLVRGRVAFVLNLKNK--ATLVSW-SPQGD---------HFVVS-GRNKIDIYQLDNASVFREIE---N- 207 (362)
T ss_pred EcCCceeeeehhhcCccceeeccCCc--ceeeEE-cCCCC---------EEEEE-eccEEEEEecccHhHhhhhh---c-
Confidence 99999999999987765444443322 223555 55443 44444 45668899887643321111 0
Q ss_pred CCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCCcEEEccCCCeEEEEeCCCCCCce
Q 000470 1307 GDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSY 1386 (1472)
Q Consensus 1307 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~llTgg~Dg~IrlWDl~~~~~s~ 1386 (1472)
...+.|+.|...+.+++|++|+.|++||.++.....
T Consensus 208 --------------------------------------------~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~ 243 (362)
T KOG0294|consen 208 --------------------------------------------PKRILCATFLDGSELLVGGDNEWISLKDTDSDTPLT 243 (362)
T ss_pred --------------------------------------------cccceeeeecCCceEEEecCCceEEEeccCCCccce
Confidence 013567777777799999999999999987643322
Q ss_pred EEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeee-cCCcEEEEEcCC
Q 000470 1387 CICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK-LNQRLLISSSRD 1465 (1472)
Q Consensus 1387 vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~-~~~~~LvS~s~D 1465 (1472)
.+ .+|...|-+++.+. +.+.+|+|+|.|
T Consensus 244 ~~---------------------------------------------------~AH~~RVK~i~~~~~~~~~~lvTaSSD 272 (362)
T KOG0294|consen 244 EF---------------------------------------------------LAHENRVKDIASYTNPEHEYLVTASSD 272 (362)
T ss_pred ee---------------------------------------------------ecchhheeeeEEEecCCceEEEEeccC
Confidence 11 23999999997554 558999999999
Q ss_pred ceEEEcC
Q 000470 1466 GAIKVWK 1472 (1472)
Q Consensus 1466 G~IkVWk 1472 (1472)
|.|+|||
T Consensus 273 G~I~vWd 279 (362)
T KOG0294|consen 273 GFIKVWD 279 (362)
T ss_pred ceEEEEE
Confidence 9999997
No 491
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.83 E-value=4.7e-21 Score=203.82 Aligned_cols=189 Identities=16% Similarity=0.113 Sum_probs=145.7
Q ss_pred CCCcceeeE-EEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC-
Q 000470 3 STPCVHKKF-WQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW- 79 (1472)
Q Consensus 3 HpNIv~~~~-~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~- 79 (1472)
|.||+.-|+ .|++.+.+++++||++ |+|..-+...+ +.|...+.++.|+++||.|||++++||||||.|||||-..
T Consensus 80 H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~G-igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d 158 (378)
T KOG1345|consen 80 HQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAG-IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD 158 (378)
T ss_pred chhhhHHHHHHhhcCceEEEeeccCccchhhhhcCccc-ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC
Confidence 789998554 6788899999999999 99999887755 8899999999999999999999999999999999999533
Q ss_pred -CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 80 -NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 80 -~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
-++||||||...+....- ........|.|||...... ...-...+..|||.||+++|.+++|++
T Consensus 159 f~rvKlcDFG~t~k~g~tV----------~~~~~~~~y~~pe~~~~~~-----ne~~~~~ps~D~WqfGIi~f~cltG~~ 223 (378)
T KOG1345|consen 159 FYRVKLCDFGLTRKVGTTV----------KYLEYVNNYHAPELCDTVV-----NEKLVVNPSTDIWQFGIIFFYCLTGKF 223 (378)
T ss_pred ccEEEeeecccccccCcee----------hhhhhhcccCCcHHHhhcc-----ccceEecccccchheeeeeeeeecCCC
Confidence 379999999887653221 1111244589999775432 224456889999999999999999999
Q ss_pred CCCch--------HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 000470 159 FFELS--------HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAES 207 (1472)
Q Consensus 159 pf~~~--------~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~e 207 (1472)
||... +..++..+.....+......++.+..+.++-|..+|++|-...+
T Consensus 224 PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~ 280 (378)
T KOG1345|consen 224 PWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWT 280 (378)
T ss_pred cchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHH
Confidence 99632 23334444444334444566788999999999999999943333
No 492
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.83 E-value=1.2e-19 Score=194.73 Aligned_cols=269 Identities=19% Similarity=0.305 Sum_probs=201.4
Q ss_pred CCCCccc-ccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeC------CC--------Cc-------------
Q 000470 1040 PDSGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDS------RK--------LE------------- 1091 (1472)
Q Consensus 1040 ~~~~W~p-~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~------~~--------~e------------- 1091 (1472)
...+|.. .|.+++.+.||.+.||+|+|++.+.+++|||.|++..||.. .. .|
T Consensus 171 TA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~ 250 (481)
T KOG0300|consen 171 TARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDT 250 (481)
T ss_pred ceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhccccccccc
Confidence 3568994 69999999999999999999999999999999999999972 11 00
Q ss_pred ----ccc--ccc-cceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcE
Q 000470 1092 ----KDI--SFR-SRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAI 1164 (1472)
Q Consensus 1092 ----~~~--~~~-~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1472)
+.. +.+ +...+.+|.+.|.+..|...++.+++++.|.+-.+||+++. .+.....+|...
T Consensus 251 d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtg--------------e~v~~LtGHd~E 316 (481)
T KOG0300|consen 251 DSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETG--------------EVVNILTGHDSE 316 (481)
T ss_pred ccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccC--------------ceeccccCcchh
Confidence 000 112 34567788889999999999999999999999999999851 112223345555
Q ss_pred EEEEEecCCCCCceEEEEEeCCCeEEEEeCCCC-CccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCc-
Q 000470 1165 VTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN-SNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV- 1242 (1472)
Q Consensus 1165 v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~-~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~- 1242 (1472)
++.++-+|. +.++++++.|.+.++||.|-. ..+..+++ |...|+++.|..+ ..+++|+.|.+|++||||+..
T Consensus 317 LtHcstHpt---QrLVvTsSrDtTFRLWDFReaI~sV~VFQG--HtdtVTS~vF~~d-d~vVSgSDDrTvKvWdLrNMRs 390 (481)
T KOG0300|consen 317 LTHCSTHPT---QRLVVTSSRDTTFRLWDFREAIQSVAVFQG--HTDTVTSVVFNTD-DRVVSGSDDRTVKVWDLRNMRS 390 (481)
T ss_pred ccccccCCc---ceEEEEeccCceeEeccchhhcceeeeecc--cccceeEEEEecC-CceeecCCCceEEEeeeccccC
Confidence 666667787 778999999999999999932 22345555 9999999999865 468899999999999999754
Q ss_pred ccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCC
Q 000470 1243 PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPS 1322 (1472)
Q Consensus 1243 ~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~ 1322 (1472)
++.++.. .++++++.. +- .++.|+.--.+..|++||+.. ..+..+. .
T Consensus 391 plATIRt--dS~~NRvav-s~---------g~~iIAiPhDNRqvRlfDlnG-~RlaRlP--------------------r 437 (481)
T KOG0300|consen 391 PLATIRT--DSPANRVAV-SK---------GHPIIAIPHDNRQVRLFDLNG-NRLARLP--------------------R 437 (481)
T ss_pred cceeeec--CCccceeEe-ec---------CCceEEeccCCceEEEEecCC-CccccCC--------------------c
Confidence 4555553 456777766 22 245667777778899999863 3221111 0
Q ss_pred CCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC---cEEEccCCCeEEEEeCCCCC
Q 000470 1323 SRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG---DLLTGGTDLKIRRWDHCSPG 1383 (1472)
Q Consensus 1323 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g---~llTgg~Dg~IrlWDl~~~~ 1383 (1472)
. ...+|...|.|++|..+. .|+|+|-|+++.=|++..+.
T Consensus 438 t----------------------sRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~ 479 (481)
T KOG0300|consen 438 T----------------------SRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPT 479 (481)
T ss_pred c----------------------cccccceeeeeeeccccCcccccccccccceeeeeEecccC
Confidence 0 114566689999997543 79999999999999988764
No 493
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.83 E-value=4.1e-19 Score=192.05 Aligned_cols=244 Identities=15% Similarity=0.205 Sum_probs=186.2
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC--EEEEEeCC
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA--QVVVGACD 1127 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~--~las~s~D 1127 (1472)
.+-+++.|.++|+++|++ +.++||||.|-+|+|||.++.. .......|.+.|+++.|.++.. +|++|+.|
T Consensus 35 ~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~------qlg~ll~HagsitaL~F~~~~S~shLlS~sdD 106 (362)
T KOG0294|consen 35 PLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRK------QLGILLSHAGSITALKFYPPLSKSHLLSGSDD 106 (362)
T ss_pred ccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchh------hhcceeccccceEEEEecCCcchhheeeecCC
Confidence 456788999999999994 8999999999999999998754 3344556788899999998764 89999999
Q ss_pred CcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCC
Q 000470 1128 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207 (1472)
Q Consensus 1128 G~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~ 1207 (1472)
|.|.+||+.. .........|...|+.++.+|. +.+-++.+.|+.++.||+-.|+....+..
T Consensus 107 G~i~iw~~~~--------------W~~~~slK~H~~~Vt~lsiHPS---~KLALsVg~D~~lr~WNLV~Gr~a~v~~L-- 167 (362)
T KOG0294|consen 107 GHIIIWRVGS--------------WELLKSLKAHKGQVTDLSIHPS---GKLALSVGGDQVLRTWNLVRGRVAFVLNL-- 167 (362)
T ss_pred CcEEEEEcCC--------------eEEeeeecccccccceeEecCC---CceEEEEcCCceeeeehhhcCccceeecc--
Confidence 9999999972 1112222334444899999998 78889999999999999999998877664
Q ss_pred CccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEE
Q 000470 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1287 (1472)
Q Consensus 1208 h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~ 1287 (1472)
....+.+.|+|.|.+++.+..++ |-+|-+...........+ .++.++.| . ++..+++|+.++.|+
T Consensus 168 -~~~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~A~v~~~i~~~--~r~l~~~~-l----------~~~~L~vG~d~~~i~ 232 (362)
T KOG0294|consen 168 -KNKATLVSWSPQGDHFVVSGRNK-IDIYQLDNASVFREIENP--KRILCATF-L----------DGSELLVGGDNEWIS 232 (362)
T ss_pred -CCcceeeEEcCCCCEEEEEeccE-EEEEecccHhHhhhhhcc--ccceeeee-c----------CCceEEEecCCceEE
Confidence 23445699999999998888764 889998877666655543 23444444 1 234789999999999
Q ss_pred EEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccC--CCC-c
Q 000470 1288 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL--PGG-D 1364 (1472)
Q Consensus 1288 VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~--p~g-~ 1364 (1472)
+||..++.+...+.. |...|-++.+- |.+ +
T Consensus 233 ~~D~ds~~~~~~~~A-----------------------------------------------H~~RVK~i~~~~~~~~~~ 265 (362)
T KOG0294|consen 233 LKDTDSDTPLTEFLA-----------------------------------------------HENRVKDIASYTNPEHEY 265 (362)
T ss_pred EeccCCCccceeeec-----------------------------------------------chhheeeeEEEecCCceE
Confidence 999988766555542 22245555532 344 7
Q ss_pred EEEccCCCeEEEEeCCCC
Q 000470 1365 LLTGGTDLKIRRWDHCSP 1382 (1472)
Q Consensus 1365 llTgg~Dg~IrlWDl~~~ 1382 (1472)
|+|+|+||.|++||++..
T Consensus 266 lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 266 LVTASSDGFIKVWDIDME 283 (362)
T ss_pred EEEeccCceEEEEEcccc
Confidence 889999999999999765
No 494
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.83 E-value=6.2e-18 Score=173.96 Aligned_cols=304 Identities=19% Similarity=0.260 Sum_probs=216.9
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCc------cccccccc---eEEeccCCceEEEEEecCCCE
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE------KDISFRSR---LTYHLEGSRALCTMMLRHSAQ 1120 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e------~~~~~~~~---~t~~~~~~~I~~v~f~~~~~~ 1120 (1472)
.|..| +...+|.+++|+|.|.+.+.||...+.+|-...... ......+. ..-..|.+.|.|.+|+|.|..
T Consensus 25 ~i~~l-~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~gel 103 (350)
T KOG0641|consen 25 AINIL-EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGEL 103 (350)
T ss_pred EEEEe-cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCe
Confidence 44444 456789999999999999999999999987543221 11111111 122346788999999999999
Q ss_pred EEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCC-ceEEEEE-eCCCeEEEEeCCCCC
Q 000470 1121 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCA-SHMFMYS-TQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1121 las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s-~~~L~~a-t~dg~I~iwDlrt~~ 1198 (1472)
+++|+.|.+|++........ ...+ .-..++-+.| .+.-++|-.+..+ +.+|+++ ..|..|++=|..+|+
T Consensus 104 iatgsndk~ik~l~fn~dt~------~~~g--~dle~nmhdg-tirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~ 174 (350)
T KOG0641|consen 104 IATGSNDKTIKVLPFNADTC------NATG--HDLEFNMHDG-TIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQ 174 (350)
T ss_pred EEecCCCceEEEEecccccc------cccC--cceeeeecCC-ceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCC
Confidence 99999999999987752111 1111 1112222333 4444455433222 4566664 457889999999999
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccc------cCCceeEEeecCCCCCccccC
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ------VCPIEKMCLFVPPPNAAVSTT 1272 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~------~~~I~~l~~~~p~~~~~~~~~ 1272 (1472)
....+.+ |.|-|.++ ++-+|-.+++|+.|.+|+.||+|-..+++.+.... .+.|..++. .|.
T Consensus 175 ~~~a~sg--htghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~v-dps-------- 242 (350)
T KOG0641|consen 175 GFHALSG--HTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAV-DPS-------- 242 (350)
T ss_pred cceeecC--CcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEE-CCC--------
Confidence 9888876 88888776 33457789999999999999999988887765321 235666666 555
Q ss_pred CCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcC
Q 000470 1273 ARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLL 1352 (1472)
Q Consensus 1273 ~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 1352 (1472)
|+++++|-.|....+||++.+..++.|..+ ..
T Consensus 243 -grll~sg~~dssc~lydirg~r~iq~f~ph-----------------------------------------------sa 274 (350)
T KOG0641|consen 243 -GRLLASGHADSSCMLYDIRGGRMIQRFHPH-----------------------------------------------SA 274 (350)
T ss_pred -cceeeeccCCCceEEEEeeCCceeeeeCCC-----------------------------------------------cc
Confidence 458899999999999999998888777532 23
Q ss_pred CceEeccCCCC-cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHH
Q 000470 1353 GIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVL 1431 (1472)
Q Consensus 1353 ~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 1431 (1472)
.|+|+.|+|.. +++||+.|.+|++=|++.--. . .....++.|
T Consensus 275 dir~vrfsp~a~yllt~syd~~ikltdlqgdla-~--------------------el~~~vv~e---------------- 317 (350)
T KOG0641|consen 275 DIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLA-H--------------------ELPIMVVAE---------------- 317 (350)
T ss_pred ceeEEEeCCCceEEEEecccceEEEeecccchh-h--------------------cCceEEEEe----------------
Confidence 69999999987 788999999999999863210 0 011234444
Q ss_pred hhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000470 1432 AAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1432 ~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVW 1471 (1472)
|.|.+-.+ .|++..--++|.|.|.++-+|
T Consensus 318 ----------hkdk~i~~-rwh~~d~sfisssadkt~tlw 346 (350)
T KOG0641|consen 318 ----------HKDKAIQC-RWHPQDFSFISSSADKTATLW 346 (350)
T ss_pred ----------ccCceEEE-EecCccceeeeccCcceEEEe
Confidence 88877777 488887778999999999999
No 495
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.82 E-value=7.3e-19 Score=199.17 Aligned_cols=279 Identities=19% Similarity=0.257 Sum_probs=196.2
Q ss_pred EEeCC-CCEEEEeCCCCccccccccceEEeccCC-ceEEEEEecCCCEEEEEe-CCCcEEEEEccccccCCCccccccCc
Q 000470 1075 SASDD-STVKVWDSRKLEKDISFRSRLTYHLEGS-RALCTMMLRHSAQVVVGA-CDGIIHMFSVDHISRGLGNVEKYSGI 1151 (1472)
Q Consensus 1075 SgS~D-GtVkvWD~~~~e~~~~~~~~~t~~~~~~-~I~~v~f~~~~~~las~s-~DG~I~vwdv~~~~~~~~~~~~~~~~ 1151 (1472)
++|.| +++.+||++++. ...+|.+... .-.++... +..+++++. .-..|++|.+.....
T Consensus 12 ssS~d~~~~~~~dl~TGt------~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~----------- 73 (476)
T KOG0646|consen 12 SSSFDPINCIVWDLRTGT------SLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQ----------- 73 (476)
T ss_pred ccCCCCcceeEEecCCCc------eeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhh-----------
Confidence 34444 559999999987 4445544321 11222222 234555544 456799998862110
Q ss_pred ccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCC
Q 000470 1152 SDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRG 1231 (1472)
Q Consensus 1152 ~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG 1231 (1472)
.. ...-...++.++.-+|+ |.+|+.|+..|.|++|.+.+|..+..+.. |+..|||+.|+-||.+|++|+.||
T Consensus 74 --~~-q~~v~Pg~v~al~s~n~---G~~l~ag~i~g~lYlWelssG~LL~v~~a--HYQ~ITcL~fs~dgs~iiTgskDg 145 (476)
T KOG0646|consen 74 --VV-QYIVLPGPVHALASSNL---GYFLLAGTISGNLYLWELSSGILLNVLSA--HYQSITCLKFSDDGSHIITGSKDG 145 (476)
T ss_pred --hh-hhcccccceeeeecCCC---ceEEEeecccCcEEEEEeccccHHHHHHh--hccceeEEEEeCCCcEEEecCCCc
Confidence 00 11123346778878887 77899999999999999999999988855 999999999999999999999999
Q ss_pred cEEEEECCC---------CcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEec
Q 000470 1232 VLTLWDLRF---------LVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRT 1302 (1472)
Q Consensus 1232 ~I~lWDlr~---------~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~ 1302 (1472)
.|.+|++-+ -.++..|.. |.-+|+.+.. .+.+. ...+++++.|.++++||+..|.....+..
T Consensus 146 ~V~vW~l~~lv~a~~~~~~~p~~~f~~-HtlsITDl~i-g~Gg~-------~~rl~TaS~D~t~k~wdlS~g~LLlti~f 216 (476)
T KOG0646|consen 146 AVLVWLLTDLVSADNDHSVKPLHIFSD-HTLSITDLQI-GSGGT-------NARLYTASEDRTIKLWDLSLGVLLLTITF 216 (476)
T ss_pred cEEEEEEEeecccccCCCccceeeecc-CcceeEEEEe-cCCCc-------cceEEEecCCceEEEEEeccceeeEEEec
Confidence 999998743 345566664 6668888877 44432 35799999999999999999977666541
Q ss_pred ccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCCC
Q 000470 1303 ANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCS 1381 (1472)
Q Consensus 1303 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~ 1381 (1472)
. ..+.+++.+|.+ .+..|++||.|.+.++..
T Consensus 217 p------------------------------------------------~si~av~lDpae~~~yiGt~~G~I~~~~~~~ 248 (476)
T KOG0646|consen 217 P------------------------------------------------SSIKAVALDPAERVVYIGTEEGKIFQNLLFK 248 (476)
T ss_pred C------------------------------------------------CcceeEEEcccccEEEecCCcceEEeeehhc
Confidence 1 157889999988 666999999999999864
Q ss_pred CCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCcc--ceeEEeeeecCCcEE
Q 000470 1382 PGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRD--SILSLGSVKLNQRLL 1459 (1472)
Q Consensus 1382 ~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d--~I~~va~~~~~~~~L 1459 (1472)
...-. .|....+ +... ..+...+.||.+ .|+++| ++.||..|
T Consensus 249 ~~~~~--~~v~~k~---------~~~~------------------------~t~~~~~~Gh~~~~~ITcLa-is~DgtlL 292 (476)
T KOG0646|consen 249 LSGQS--AGVNQKG---------RHEE------------------------NTQINVLVGHENESAITCLA-ISTDGTLL 292 (476)
T ss_pred CCccc--ccccccc---------cccc------------------------cceeeeeccccCCcceeEEE-EecCccEE
Confidence 32100 0000000 0000 012234567988 999997 99999999
Q ss_pred EEEcCCceEEEcC
Q 000470 1460 ISSSRDGAIKVWK 1472 (1472)
Q Consensus 1460 vS~s~DG~IkVWk 1472 (1472)
+|||.||.|.|||
T Consensus 293 lSGd~dg~VcvWd 305 (476)
T KOG0646|consen 293 LSGDEDGKVCVWD 305 (476)
T ss_pred EeeCCCCCEEEEe
Confidence 9999999999997
No 496
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.82 E-value=3.4e-19 Score=207.97 Aligned_cols=222 Identities=19% Similarity=0.301 Sum_probs=179.8
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEE-ecCCCEEEEEeCCC
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMM-LRHSAQVVVGACDG 1128 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f-~~~~~~las~s~DG 1128 (1472)
.++.++.|.+.|+.++...+++-|+|||.|-|||+|+..... . -+..+...|...|.|++. .++...+|+||-|+
T Consensus 65 ~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~-~---~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~ 140 (735)
T KOG0308|consen 65 YIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDN-T---FCMSTIRTHKDYVKCLAYIAKNNELVASGGLDR 140 (735)
T ss_pred hhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCc-c---hhHhhhhcccchheeeeecccCceeEEecCCCc
Confidence 578899999999999999999999999999999999998753 1 134456678889999999 67888999999999
Q ss_pred cEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCC
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1208 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h 1208 (1472)
.|.+||+.+.... -+..+... .......++...++.++.++. +.++++|+..+.+++||.|+++.+-.+.+ |
T Consensus 141 ~IflWDin~~~~~--l~~s~n~~-t~~sl~sG~k~siYSLA~N~t---~t~ivsGgtek~lr~wDprt~~kimkLrG--H 212 (735)
T KOG0308|consen 141 KIFLWDINTGTAT--LVASFNNV-TVNSLGSGPKDSIYSLAMNQT---GTIIVSGGTEKDLRLWDPRTCKKIMKLRG--H 212 (735)
T ss_pred cEEEEEccCcchh--hhhhcccc-ccccCCCCCccceeeeecCCc---ceEEEecCcccceEEeccccccceeeeec--c
Confidence 9999999842100 00011110 011111144567888888887 67999999999999999999998888875 9
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEE
Q 000470 1209 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSL 1288 (1472)
Q Consensus 1209 ~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~V 1288 (1472)
..-|.++..+++|+.+++|++||+|++|||+.+.|+.++.. |...++.+.. .|.-. .+++|+-+|.|..
T Consensus 213 TdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~v-H~e~VWaL~~-~~sf~---------~vYsG~rd~~i~~ 281 (735)
T KOG0308|consen 213 TDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIV-HKEGVWALQS-SPSFT---------HVYSGGRDGNIYR 281 (735)
T ss_pred ccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEe-ccCceEEEee-CCCcc---------eEEecCCCCcEEe
Confidence 99999999999999999999999999999999999999887 4445888877 65544 7899999999999
Q ss_pred EEcCCC
Q 000470 1289 WNAENG 1294 (1472)
Q Consensus 1289 WDl~t~ 1294 (1472)
=|+.+.
T Consensus 282 Tdl~n~ 287 (735)
T KOG0308|consen 282 TDLRNP 287 (735)
T ss_pred cccCCc
Confidence 999884
No 497
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.82 E-value=8.1e-21 Score=223.59 Aligned_cols=197 Identities=21% Similarity=0.190 Sum_probs=162.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|.||||+.|++.|.....+++.||||+ |+|.|...-.+.|++.++...++..+.||+|||++|-+|||||-.|||+++.
T Consensus 69 c~h~nivay~gsylr~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~ 148 (829)
T KOG0576|consen 69 CRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDE 148 (829)
T ss_pred CCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeeccc
Confidence 689999999999999999999999999 6999998888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC-
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP- 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~- 158 (1472)
|.+||+|||.+..+...- .--....||+.|||||+-. +...+.|...+|||++|+...|+-.-+|
T Consensus 149 gDvklaDfgvsaqitati-------~KrksfiGtpywmapEvaa-------verkggynqlcdiwa~gitAiel~eLqpp 214 (829)
T KOG0576|consen 149 GDVKLADFGVSAQITATI-------AKRKSFIGTPYWMAPEVAA-------VERKGGYNQLCDIWALGITAIELGELQPP 214 (829)
T ss_pred CceeecccCchhhhhhhh-------hhhhcccCCccccchhHHH-------HHhcccccccccccccccchhhhhhcCCc
Confidence 999999999865442111 1123456899999999753 4567789999999999999999987754
Q ss_pred CCCchHHHH---HHhcCCCCCc-ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLA---YRRGQYDPSQ-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~---~~~~~~~~~~-~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.|+...... +.+..+.+.. .-+...++.+.+|++.+|.++|++||+++.+|.|
T Consensus 215 lfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 215 LFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred ccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 466554433 3344444322 2223456789999999999999999999999987
No 498
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.82 E-value=2.3e-18 Score=194.75 Aligned_cols=267 Identities=17% Similarity=0.191 Sum_probs=202.9
Q ss_pred eeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCcccccc-cc-----------ceEEeccCCceEEEEEecCC
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISF-RS-----------RLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1051 V~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~-~~-----------~~t~~~~~~~I~~v~f~~~~ 1118 (1472)
...+..|.-+|++++++||+++..++|.||+|.=|++.++.+.... .. ......|...+.+++.++++
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg 214 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG 214 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence 4556789999999999999999999999999999999877643111 00 00113677789999999999
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
++||+|+.|..|+||+.++.. .+. ....|...|..++|--. ...+++++.|++|++|++..+.
T Consensus 215 kylatgg~d~~v~Iw~~~t~e-------------hv~-~~~ghr~~V~~L~fr~g---t~~lys~s~Drsvkvw~~~~~s 277 (479)
T KOG0299|consen 215 KYLATGGRDRHVQIWDCDTLE-------------HVK-VFKGHRGAVSSLAFRKG---TSELYSASADRSVKVWSIDQLS 277 (479)
T ss_pred cEEEecCCCceEEEecCcccc-------------hhh-cccccccceeeeeeecC---ccceeeeecCCceEEEehhHhH
Confidence 999999999999999998521 111 12356667777888765 4489999999999999999998
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEE
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1278 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~ 1278 (1472)
.+.++-+ |++.|.++.....++.+.+|+.|+++++|++.. ..+-+..++...+.+++|.+. ..++
T Consensus 278 ~vetlyG--Hqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~e--esqlifrg~~~sidcv~~In~-----------~Hfv 342 (479)
T KOG0299|consen 278 YVETLYG--HQDGVLGIDALSRERCVTVGGRDRTVRLWKIPE--ESQLIFRGGEGSIDCVAFIND-----------EHFV 342 (479)
T ss_pred HHHHHhC--CccceeeechhcccceEEeccccceeEEEeccc--cceeeeeCCCCCeeeEEEecc-----------ccee
Confidence 8888866 999999999888889999999999999999943 233333455667888888322 2579
Q ss_pred EEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEec
Q 000470 1279 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1358 (1472)
Q Consensus 1279 vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1358 (1472)
+|+.+|.|.+|++.+.+.+.+........ |.. .+-++...|++++
T Consensus 343 sGSdnG~IaLWs~~KKkplf~~~~AHgv~-------------~~~----------------------~~~~~~~Witsla 387 (479)
T KOG0299|consen 343 SGSDNGSIALWSLLKKKPLFTSRLAHGVI-------------PEL----------------------DPVNGNFWITSLA 387 (479)
T ss_pred eccCCceEEEeeecccCceeEeecccccc-------------CCc----------------------cccccccceeeeE
Confidence 99999999999999888877765322100 000 0011224799999
Q ss_pred cCCCC-cEEEccCCCeEEEEeCCCCCC
Q 000470 1359 PLPGG-DLLTGGTDLKIRRWDHCSPGR 1384 (1472)
Q Consensus 1359 ~~p~g-~llTgg~Dg~IrlWDl~~~~~ 1384 (1472)
..|.. .+++|+.+|.||+|-+..+-+
T Consensus 388 ~i~~sdL~asGS~~G~vrLW~i~~g~r 414 (479)
T KOG0299|consen 388 VIPGSDLLASGSWSGCVRLWKIEDGLR 414 (479)
T ss_pred ecccCceEEecCCCCceEEEEecCCcc
Confidence 98877 566999999999999876644
No 499
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.81 E-value=3.7e-19 Score=211.42 Aligned_cols=293 Identities=18% Similarity=0.259 Sum_probs=207.5
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccce-EEeccCCceEEEEEec-CCCEEEEEeCC
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRL-TYHLEGSRALCTMMLR-HSAQVVVGACD 1127 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~-t~~~~~~~I~~v~f~~-~~~~las~s~D 1127 (1472)
.+-++++|. +.|...++-..++.++. ...+|+.+..........-.. +-......+..|+|.. ..++||+|+..
T Consensus 34 ~~~~~k~~~---nAIs~nr~~~qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~n 109 (839)
T KOG0269|consen 34 MNCKLKAKA---NAISVNRDINQIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTN 109 (839)
T ss_pred eeeeccccc---ceEeecCCcceeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCC
Confidence 344455554 45556677777777766 478888877544322211110 0000112356788875 47899999999
Q ss_pred CcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCC
Q 000470 1128 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207 (1472)
Q Consensus 1128 G~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~ 1207 (1472)
|.|.+||+....+ ........+|...+..+.|++...+ +|++|+.||+|++||+|...-..++..
T Consensus 110 G~i~vWdlnk~~r-----------nk~l~~f~EH~Rs~~~ldfh~tep~--iliSGSQDg~vK~~DlR~~~S~~t~~~-- 174 (839)
T KOG0269|consen 110 GVISVWDLNKSIR-----------NKLLTVFNEHERSANKLDFHSTEPN--ILISGSQDGTVKCWDLRSKKSKSTFRS-- 174 (839)
T ss_pred CcEEEEecCcccc-----------chhhhHhhhhccceeeeeeccCCcc--EEEecCCCceEEEEeeecccccccccc--
Confidence 9999999973111 1112233456777888899987644 999999999999999999888777766
Q ss_pred CccceEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcc-cceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000470 1208 EEGYVSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVP-VNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1285 (1472)
Q Consensus 1208 h~g~Itsl~~sp-~g~~LvsGssdG~I~lWDlr~~~~-i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~ 1285 (1472)
....|..+.|+| .++.|+++...|+|.+||+|+... ...+. +|.+++.++.| +|+.. ||++||-|+.
T Consensus 175 nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~-AH~GpV~c~nw-hPnr~---------~lATGGRDK~ 243 (839)
T KOG0269|consen 175 NSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLT-AHNGPVLCLNW-HPNRE---------WLATGGRDKM 243 (839)
T ss_pred cchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhh-cccCceEEEee-cCCCc---------eeeecCCCcc
Confidence 567899999999 678999999999999999997543 33333 58899999999 98654 9999999999
Q ss_pred EEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC--
Q 000470 1286 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-- 1363 (1472)
Q Consensus 1286 V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-- 1363 (1472)
|+|||+.++......... -..+|.++.|.|..
T Consensus 244 vkiWd~t~~~~~~~~tIn----------------------------------------------Tiapv~rVkWRP~~~~ 277 (839)
T KOG0269|consen 244 VKIWDMTDSRAKPKHTIN----------------------------------------------TIAPVGRVKWRPARSY 277 (839)
T ss_pred EEEEeccCCCccceeEEe----------------------------------------------ecceeeeeeeccCccc
Confidence 999999764332222110 01268889999876
Q ss_pred cEEEccC--CCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCC
Q 000470 1364 DLLTGGT--DLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGC 1441 (1472)
Q Consensus 1364 ~llTgg~--Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1441 (1472)
.|+|++. |-.|++||+..+=-.+. ...+
T Consensus 278 hLAtcsmv~dtsV~VWDvrRPYIP~~--------------------------------------------------t~~e 307 (839)
T KOG0269|consen 278 HLATCSMVVDTSVHVWDVRRPYIPYA--------------------------------------------------TFLE 307 (839)
T ss_pred hhhhhhccccceEEEEeeccccccce--------------------------------------------------eeec
Confidence 5666655 99999999986633221 1123
Q ss_pred CccceeEEeeeecCCcEEEEEcCCceE
Q 000470 1442 HRDSILSLGSVKLNQRLLISSSRDGAI 1468 (1472)
Q Consensus 1442 H~d~I~~va~~~~~~~~LvS~s~DG~I 1468 (1472)
|++.++.+++-+.+...+-||+.||+|
T Consensus 308 H~~~vt~i~W~~~d~~~l~s~sKD~tv 334 (839)
T KOG0269|consen 308 HTDSVTGIAWDSGDRINLWSCSKDGTV 334 (839)
T ss_pred cCccccceeccCCCceeeEeecCccHH
Confidence 999999997334567889999999986
No 500
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.81 E-value=9.8e-20 Score=206.54 Aligned_cols=204 Identities=18% Similarity=0.141 Sum_probs=150.5
Q ss_pred CCCCCcceeeEEEEeCC----eEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeec
Q 000470 1 MSSTPCVHKKFWQETDK----AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK--------GICHG 67 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~----~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~--------gIvH~ 67 (1472)
|.|+||+.|+..-..++ .+|||.+|-+ |+|+|||.. ..++.....+++..+++||.|||.. .|.||
T Consensus 262 LRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHR 340 (513)
T KOG2052|consen 262 LRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHR 340 (513)
T ss_pred hccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcc
Confidence 68999999998876554 6899999999 999999988 4599999999999999999999963 49999
Q ss_pred CCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 68 DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
|||..||||.++|..-|+|+|+|....... ..........+||..|||||++...-.. ..- .--..+||||||
T Consensus 341 DlKSKNILVKkn~~C~IADLGLAv~h~~~t---~~idi~~N~rVGTKRYMAPEvLdetin~---~~F-esyk~ADIYafg 413 (513)
T KOG2052|consen 341 DLKSKNILVKKNGTCCIADLGLAVRHDSDT---DTIDIPPNPRVGTKRYMAPEVLDETINM---KHF-ESYKRADIYAFG 413 (513)
T ss_pred ccccccEEEccCCcEEEeeceeeEEecccC---CcccCCCCCccceeeccChHHhhhhcCh---hhh-hhhhHHHHHHHH
Confidence 999999999999999999999986553221 2233344678899999999998643211 000 012358999999
Q ss_pred HHHHHHHh---------C-CCCCC-----chHHHHHHhcCCC--CCcccCC--CCCH---HHHHHHHHhcccCcCCCCCH
Q 000470 148 CVIAELFL---------E-VPFFE-----LSHLLAYRRGQYD--PSQHLEK--IPDS---GIRKMILHMIQLEPELRFSA 205 (1472)
Q Consensus 148 ~il~eLlt---------g-~~pf~-----~~~~~~~~~~~~~--~~~~l~~--~~~~---~l~~LI~~mL~~dP~~Rpsa 205 (1472)
.|+||+.. . ++||. ..+..++++-... ..+.++. ..++ .+-.|++.||..||.-|.||
T Consensus 414 LVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA 493 (513)
T KOG2052|consen 414 LVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA 493 (513)
T ss_pred HHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH
Confidence 99999974 1 45662 3344555432221 1111221 2223 45578999999999999999
Q ss_pred HHHHHHh
Q 000470 206 ESYLQNY 212 (1472)
Q Consensus 206 ~elL~~~ 212 (1472)
--+-+.+
T Consensus 494 LriKKtl 500 (513)
T KOG2052|consen 494 LRIKKTL 500 (513)
T ss_pred HHHHHHH
Confidence 7776653
Done!