Query 000475
Match_columns 1470
No_of_seqs 687 out of 5887
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 10:06:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000475.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000475hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 3E-273 6E-278 2598.2 145.0 1235 201-1461 122-1380(1381)
2 PLN03130 ABC transporter C fam 100.0 2E-209 4E-214 2122.4 171.9 1416 7-1459 29-1477(1622)
3 PLN03232 ABC transporter C fam 100.0 1E-205 3E-210 2087.8 171.4 1415 8-1459 30-1474(1495)
4 TIGR00957 MRP_assoc_pro multi 100.0 4E-202 9E-207 2056.5 172.4 1232 199-1456 199-1520(1522)
5 TIGR01271 CFTR_protein cystic 100.0 8E-197 2E-201 1997.5 152.6 1235 201-1460 3-1456(1490)
6 PTZ00243 ABC transporter; Prov 100.0 3E-187 7E-192 1902.0 151.9 1243 199-1459 57-1549(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 4E-141 8E-146 1335.6 113.7 1086 334-1457 91-1226(1228)
8 PTZ00265 multidrug resistance 100.0 9E-131 2E-135 1335.4 140.6 1164 266-1456 51-1465(1466)
9 KOG0058 Peptide exporter, ABC 100.0 1.4E-87 3E-92 808.4 61.6 567 876-1460 134-708 (716)
10 COG2274 SunT ABC-type bacterio 100.0 9.8E-81 2.1E-85 783.1 66.2 546 894-1456 157-708 (709)
11 COG1132 MdlB ABC-type multidru 100.0 1.3E-77 2.9E-82 762.2 67.5 543 896-1457 19-565 (567)
12 PRK11174 cysteine/glutathione 100.0 7.7E-76 1.7E-80 750.2 69.8 560 878-1457 11-585 (588)
13 TIGR00958 3a01208 Conjugate Tr 100.0 9.1E-76 2E-80 760.1 67.4 552 879-1453 151-711 (711)
14 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 8.6E-75 1.9E-79 751.7 71.0 540 895-1455 140-684 (686)
15 PRK10790 putative multidrug tr 100.0 2.8E-74 6E-79 736.0 71.0 544 896-1459 28-578 (592)
16 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.4E-74 3.1E-79 753.0 68.7 560 876-1453 141-709 (710)
17 TIGR01193 bacteriocin_ABC ABC- 100.0 1.7E-74 3.7E-79 751.4 68.5 558 876-1454 143-707 (708)
18 PRK11176 lipid transporter ATP 100.0 3E-73 6.5E-78 725.8 69.1 505 935-1457 73-580 (582)
19 TIGR03375 type_I_sec_LssB type 100.0 6.2E-73 1.3E-77 735.2 69.7 549 877-1444 135-689 (694)
20 PRK11160 cysteine/glutathione 100.0 1.1E-72 2.3E-77 716.1 69.4 555 880-1454 7-572 (574)
21 TIGR02203 MsbA_lipidA lipid A 100.0 6.4E-72 1.4E-76 712.8 69.2 542 897-1456 20-568 (571)
22 TIGR01846 type_I_sec_HlyB type 100.0 1.8E-71 4E-76 720.9 70.4 561 876-1456 126-692 (694)
23 COG4988 CydD ABC-type transpor 100.0 1.4E-71 3.1E-76 659.9 62.4 510 929-1458 42-557 (559)
24 COG4987 CydC ABC-type transpor 100.0 3.8E-71 8.2E-76 643.7 59.0 492 945-1454 76-571 (573)
25 KOG0055 Multidrug/pheromone ex 100.0 8.3E-73 1.8E-77 715.3 48.5 514 927-1458 71-590 (1228)
26 PRK13657 cyclic beta-1,2-gluca 100.0 3.5E-70 7.6E-75 697.2 70.9 550 893-1459 21-573 (588)
27 TIGR02868 CydC thiol reductant 100.0 1.4E-70 3.1E-75 693.1 63.9 506 896-1415 18-529 (529)
28 KOG0056 Heavy metal exporter H 100.0 6.8E-73 1.5E-77 639.4 37.9 506 939-1461 271-779 (790)
29 TIGR02204 MsbA_rel ABC transpo 100.0 6E-70 1.3E-74 695.0 69.2 561 878-1455 7-574 (576)
30 TIGR01192 chvA glucan exporter 100.0 1.1E-68 2.4E-73 680.2 71.0 562 880-1461 10-575 (585)
31 PRK10789 putative multidrug tr 100.0 6.5E-69 1.4E-73 681.4 65.6 509 932-1458 41-552 (569)
32 TIGR02857 CydD thiol reductant 100.0 2.5E-68 5.4E-73 672.7 64.1 514 897-1427 9-529 (529)
33 KOG0057 Mitochondrial Fe/S clu 100.0 1.8E-68 3.9E-73 621.4 55.6 510 927-1456 74-586 (591)
34 PRK11174 cysteine/glutathione 100.0 8.4E-67 1.8E-71 667.0 73.1 538 266-820 13-583 (588)
35 KOG0058 Peptide exporter, ABC 100.0 5.5E-66 1.2E-70 621.6 63.9 545 267-821 139-704 (716)
36 TIGR01842 type_I_sec_PrtD type 100.0 6.1E-66 1.3E-70 651.9 66.1 523 897-1443 12-542 (544)
37 COG5265 ATM1 ABC-type transpor 100.0 2.9E-68 6.3E-73 600.3 39.6 487 948-1454 3-496 (497)
38 PTZ00265 multidrug resistance 100.0 2.8E-66 6.1E-71 704.9 66.8 513 929-1457 99-729 (1466)
39 COG1123 ATPase components of v 100.0 3.1E-67 6.8E-72 626.7 45.6 465 590-1455 5-531 (539)
40 COG2274 SunT ABC-type bacterio 100.0 2.6E-64 5.7E-69 634.5 72.3 542 263-818 142-705 (709)
41 PRK10261 glutathione transport 100.0 1.7E-66 3.8E-71 662.7 50.9 484 589-1454 11-565 (623)
42 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2E-63 4.4E-68 645.4 74.7 537 265-819 126-683 (686)
43 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.1E-63 2.5E-68 650.7 72.4 535 267-817 146-708 (710)
44 TIGR03375 type_I_sec_LssB type 100.0 2.5E-63 5.4E-68 645.4 73.3 530 265-808 137-688 (694)
45 TIGR00958 3a01208 Conjugate Tr 100.0 3.2E-63 6.8E-68 643.1 73.1 525 270-808 156-702 (711)
46 PRK15134 microcin C ABC transp 100.0 2E-65 4.4E-70 644.5 47.4 452 590-1449 5-521 (529)
47 TIGR01194 cyc_pep_trnsptr cycl 100.0 1E-63 2.2E-68 631.6 63.0 515 898-1435 25-551 (555)
48 TIGR00956 3a01205 Pleiotropic 100.0 4.5E-64 9.7E-69 683.4 60.3 251 1175-1439 714-989 (1394)
49 PRK13549 xylose transporter AT 100.0 3.9E-65 8.4E-70 638.7 44.9 438 590-1442 5-493 (506)
50 PRK09700 D-allose transporter 100.0 6.1E-65 1.3E-69 637.9 44.1 436 590-1440 5-495 (510)
51 TIGR03269 met_CoM_red_A2 methy 100.0 1E-64 2.2E-69 637.4 46.1 219 1219-1443 279-517 (520)
52 PRK15064 ABC transporter ATP-b 100.0 5.7E-64 1.2E-68 631.6 51.9 201 1218-1444 318-526 (530)
53 PRK11176 lipid transporter ATP 100.0 8.8E-62 1.9E-66 620.3 72.6 539 267-819 17-577 (582)
54 TIGR02203 MsbA_lipidA lipid A 100.0 1.1E-61 2.5E-66 618.5 73.0 538 267-818 6-565 (571)
55 TIGR01193 bacteriocin_ABC ABC- 100.0 8E-62 1.7E-66 632.7 72.8 532 268-817 149-705 (708)
56 PRK10790 putative multidrug tr 100.0 3E-61 6.5E-66 615.9 75.6 537 268-820 16-574 (592)
57 PRK10762 D-ribose transporter 100.0 2.4E-64 5.2E-69 630.8 43.1 431 590-1442 4-483 (501)
58 PRK15439 autoinducer 2 ABC tra 100.0 6E-64 1.3E-68 627.5 46.0 445 590-1444 11-493 (510)
59 TIGR02633 xylG D-xylose ABC tr 100.0 8.6E-64 1.9E-68 626.5 45.3 213 1219-1441 257-490 (500)
60 TIGR01257 rim_protein retinal- 100.0 1.8E-60 4E-65 642.8 77.9 216 1217-1444 1935-2160(2272)
61 PRK11288 araG L-arabinose tran 100.0 3.1E-63 6.8E-68 620.7 46.2 433 590-1442 4-484 (501)
62 PRK13657 cyclic beta-1,2-gluca 100.0 3.7E-60 8E-65 605.1 73.5 533 269-820 13-569 (588)
63 TIGR02204 MsbA_rel ABC transpo 100.0 3.1E-60 6.8E-65 605.7 72.3 541 266-818 9-572 (576)
64 TIGR02868 CydC thiol reductant 100.0 1.8E-60 4E-65 601.2 68.7 500 268-780 6-529 (529)
65 TIGR01842 type_I_sec_PrtD type 100.0 2.9E-60 6.3E-65 600.2 70.0 521 271-808 2-542 (544)
66 PRK10982 galactose/methyl gala 100.0 9.7E-63 2.1E-67 615.2 45.8 430 594-1442 2-479 (491)
67 PRK10789 putative multidrug tr 100.0 5.6E-60 1.2E-64 599.7 71.6 524 285-820 5-549 (569)
68 PRK11819 putative ABC transpor 100.0 7.1E-62 1.5E-66 614.4 53.5 203 1218-1445 323-535 (556)
69 PRK11160 cysteine/glutathione 100.0 9.9E-60 2.1E-64 597.6 73.0 537 269-818 10-571 (574)
70 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1E-61 2.2E-66 613.1 53.9 481 590-1443 4-531 (552)
71 PRK10938 putative molybdenum t 100.0 1.1E-62 2.4E-67 615.0 43.8 439 590-1437 3-486 (490)
72 PRK10522 multidrug transporter 100.0 4.6E-60 1E-64 598.3 64.3 469 935-1436 56-531 (547)
73 TIGR01846 type_I_sec_HlyB type 100.0 2.7E-59 5.8E-64 607.2 73.1 540 266-819 130-690 (694)
74 PLN03232 ABC transporter C fam 100.0 2.6E-60 5.6E-65 653.3 67.1 474 952-1457 366-841 (1495)
75 PLN03130 ABC transporter C fam 100.0 4.3E-60 9.4E-65 650.2 66.6 473 952-1457 366-841 (1622)
76 COG4172 ABC-type uncharacteriz 100.0 1.7E-61 3.7E-66 540.6 41.7 456 589-1451 5-524 (534)
77 PRK10636 putative ABC transpor 100.0 1.3E-60 2.9E-65 608.8 54.7 200 1219-1443 312-517 (638)
78 COG1132 MdlB ABC-type multidru 100.0 1.5E-58 3.3E-63 587.8 71.8 529 273-820 13-563 (567)
79 TIGR01192 chvA glucan exporter 100.0 4.4E-58 9.5E-63 583.3 73.9 534 269-819 13-568 (585)
80 TIGR02857 CydD thiol reductant 100.0 2.1E-58 4.5E-63 582.5 68.2 506 274-792 2-529 (529)
81 COG4988 CydD ABC-type transpor 100.0 1.8E-57 4E-62 539.7 66.7 523 279-821 4-555 (559)
82 PRK11147 ABC transporter ATPas 100.0 5.6E-59 1.2E-63 595.7 52.0 200 1219-1443 319-528 (635)
83 PLN03073 ABC transporter F fam 100.0 5.7E-58 1.2E-62 585.1 55.0 199 1218-1441 507-712 (718)
84 COG0488 Uup ATPase components 100.0 1.5E-57 3.2E-62 556.7 49.8 484 590-1444 3-526 (530)
85 PLN03140 ABC transporter G fam 100.0 1.3E-56 2.9E-61 607.0 63.3 211 1219-1439 867-1106(1470)
86 KOG0057 Mitochondrial Fe/S clu 100.0 1.7E-55 3.7E-60 513.0 58.4 515 289-817 44-582 (591)
87 TIGR00957 MRP_assoc_pro multi 100.0 5.1E-55 1.1E-59 601.8 72.0 467 343-820 1030-1519(1522)
88 COG4987 CydC ABC-type transpor 100.0 6.3E-55 1.4E-59 508.3 61.1 463 344-817 84-569 (573)
89 COG4618 ArpD ABC-type protease 100.0 5.9E-56 1.3E-60 511.3 50.6 486 937-1444 73-561 (580)
90 PRK13409 putative ATPase RIL; 100.0 9.5E-57 2.1E-61 565.0 41.7 191 1219-1437 340-536 (590)
91 PTZ00243 ABC transporter; Prov 100.0 3.6E-53 7.7E-58 581.6 71.5 460 352-820 1032-1545(1560)
92 TIGR00954 3a01203 Peroxysomal 100.0 3.8E-54 8.2E-59 551.5 56.7 509 892-1429 97-653 (659)
93 TIGR01194 cyc_pep_trnsptr cycl 100.0 1E-52 2.2E-57 531.6 64.4 508 269-800 11-551 (555)
94 KOG0054 Multidrug resistance-a 100.0 4.9E-53 1.1E-57 549.0 61.6 476 951-1457 266-744 (1381)
95 COG1129 MglA ABC-type sugar tr 100.0 3.4E-54 7.3E-59 512.2 42.2 441 589-1439 7-486 (500)
96 KOG0056 Heavy metal exporter H 100.0 5E-54 1.1E-58 486.5 39.7 525 283-820 223-773 (790)
97 COG4618 ArpD ABC-type protease 100.0 6.5E-52 1.4E-56 478.0 54.7 528 263-808 11-560 (580)
98 PRK10522 multidrug transporter 100.0 8.9E-51 1.9E-55 513.8 64.4 504 265-800 3-530 (547)
99 TIGR01271 CFTR_protein cystic 100.0 4.3E-51 9.4E-56 561.1 65.4 476 942-1454 137-646 (1490)
100 COG3845 ABC-type uncharacteriz 100.0 1.4E-52 3.1E-57 486.2 37.7 439 589-1440 3-489 (501)
101 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.6E-53 3.5E-58 488.8 28.0 238 1218-1457 1-238 (275)
102 TIGR00954 3a01203 Peroxysomal 100.0 9E-49 1.9E-53 502.0 61.8 501 276-794 97-653 (659)
103 PRK14257 phosphate ABC transpo 100.0 1.4E-49 2.9E-54 467.9 27.7 259 1183-1448 35-318 (329)
104 COG5265 ATM1 ABC-type transpor 100.0 1.6E-47 3.4E-52 432.6 39.2 452 353-816 17-493 (497)
105 KOG0927 Predicted transporter 100.0 3.4E-46 7.4E-51 433.0 27.4 194 1219-1436 389-588 (614)
106 COG1126 GlnQ ABC-type polar am 100.0 2.7E-45 5.8E-50 384.7 22.1 217 1219-1448 2-230 (240)
107 COG1135 AbcC ABC-type metal io 100.0 3.3E-45 7.1E-50 402.5 22.5 225 1220-1455 2-244 (339)
108 cd03288 ABCC_SUR2 The SUR doma 100.0 3.2E-44 7E-49 411.1 29.8 240 1216-1455 16-255 (257)
109 KOG0062 ATPase component of AB 100.0 3.1E-43 6.8E-48 406.4 31.9 194 1216-1435 359-560 (582)
110 cd03252 ABCC_Hemolysin The ABC 100.0 3.4E-43 7.4E-48 398.3 27.8 234 1220-1454 1-235 (237)
111 COG1117 PstB ABC-type phosphat 100.0 8.3E-44 1.8E-48 371.0 19.0 220 1218-1446 6-240 (253)
112 cd03244 ABCC_MRP_domain2 Domai 100.0 5.4E-43 1.2E-47 392.5 27.0 221 1218-1438 1-221 (221)
113 PRK14257 phosphate ABC transpo 100.0 1E-42 2.2E-47 409.6 25.6 262 524-809 22-314 (329)
114 COG1125 OpuBA ABC-type proline 100.0 7.5E-43 1.6E-47 372.2 19.9 217 1220-1449 2-231 (309)
115 cd03251 ABCC_MsbA MsbA is an e 100.0 1E-41 2.2E-46 385.6 27.3 231 1220-1451 1-232 (234)
116 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.3E-41 2.9E-46 377.2 26.0 207 1214-1438 1-207 (207)
117 cd03254 ABCC_Glucan_exporter_l 100.0 1.5E-41 3.3E-46 382.9 26.5 226 1218-1444 1-227 (229)
118 cd03253 ABCC_ATM1_transporter 100.0 2.8E-41 6.1E-46 382.5 28.1 233 1220-1454 1-234 (236)
119 COG1120 FepC ABC-type cobalami 100.0 8.4E-42 1.8E-46 378.4 21.8 213 1219-1444 2-229 (258)
120 TIGR02314 ABC_MetN D-methionin 100.0 1.6E-41 3.4E-46 400.0 25.3 219 1220-1449 2-236 (343)
121 COG1126 GlnQ ABC-type polar am 100.0 1.6E-41 3.4E-46 356.4 21.8 203 590-812 2-229 (240)
122 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 5.2E-41 1.1E-45 380.8 27.5 232 1220-1452 1-234 (238)
123 COG1124 DppF ABC-type dipeptid 100.0 2.2E-41 4.8E-46 363.0 22.4 226 1219-1455 3-243 (252)
124 cd03245 ABCC_bacteriocin_expor 100.0 6.9E-41 1.5E-45 375.2 26.5 219 1218-1436 1-220 (220)
125 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.5E-41 5.5E-46 372.4 22.1 209 1219-1444 4-228 (254)
126 COG1127 Ttg2A ABC-type transpo 100.0 1.2E-40 2.6E-45 355.0 22.8 221 1218-1451 7-243 (263)
127 cd03260 ABC_PstB_phosphate_tra 100.0 7.9E-41 1.7E-45 376.5 22.7 211 1220-1441 1-227 (227)
128 PRK13631 cbiO cobalt transport 100.0 1.1E-40 2.3E-45 391.4 24.6 218 1217-1444 19-266 (320)
129 KOG0065 Pleiotropic drug resis 100.0 2E-39 4.3E-44 410.9 37.0 199 1232-1440 802-1018(1391)
130 cd03261 ABC_Org_Solvent_Resist 100.0 1.7E-40 3.6E-45 375.8 23.2 212 1220-1444 1-227 (235)
131 COG1122 CbiO ABC-type cobalt t 100.0 1.3E-40 2.9E-45 369.7 21.9 215 1219-1445 3-230 (235)
132 PRK14269 phosphate ABC transpo 100.0 4E-40 8.7E-45 375.1 25.8 219 1219-1446 2-233 (246)
133 PRK14250 phosphate ABC transpo 100.0 5.9E-40 1.3E-44 372.4 26.9 221 1219-1452 3-230 (241)
134 COG3839 MalK ABC-type sugar tr 100.0 2.9E-40 6.3E-45 379.5 23.1 216 1219-1449 3-229 (338)
135 PRK13650 cbiO cobalt transport 100.0 4.3E-40 9.3E-45 381.0 24.5 215 1219-1444 4-230 (279)
136 cd03248 ABCC_TAP TAP, the Tran 100.0 5.4E-40 1.2E-44 369.5 24.0 217 1216-1432 8-226 (226)
137 COG3638 ABC-type phosphate/pho 100.0 3.3E-40 7.2E-45 350.7 20.9 213 1219-1443 3-237 (258)
138 PRK11153 metN DL-methionine tr 100.0 5.7E-40 1.2E-44 389.7 25.0 221 1220-1451 2-238 (343)
139 PRK11650 ugpC glycerol-3-phosp 100.0 9.5E-40 2.1E-44 388.1 26.3 217 1219-1449 3-230 (356)
140 cd03263 ABC_subfamily_A The AB 100.0 6.8E-40 1.5E-44 367.1 22.9 210 1220-1441 1-219 (220)
141 PRK14273 phosphate ABC transpo 100.0 1.3E-39 2.8E-44 372.9 25.0 222 1219-1449 7-244 (254)
142 PRK13647 cbiO cobalt transport 100.0 9.6E-40 2.1E-44 377.1 24.1 212 1219-1442 4-226 (274)
143 PRK13637 cbiO cobalt transport 100.0 8.6E-40 1.9E-44 379.8 23.7 214 1220-1444 3-235 (287)
144 PRK10744 pstB phosphate transp 100.0 1.9E-39 4E-44 372.6 26.2 224 1217-1449 11-250 (260)
145 PRK11432 fbpC ferric transport 100.0 1.4E-39 2.9E-44 385.6 25.6 217 1218-1449 5-232 (351)
146 COG1136 SalX ABC-type antimicr 100.0 1.7E-39 3.7E-44 353.3 24.2 203 1220-1433 2-221 (226)
147 PRK14242 phosphate transporter 100.0 1.6E-39 3.6E-44 371.8 25.2 219 1219-1446 6-240 (253)
148 COG2884 FtsE Predicted ATPase 100.0 3.8E-40 8.3E-45 337.9 17.7 207 1220-1438 2-221 (223)
149 cd03256 ABC_PhnC_transporter A 100.0 1.1E-39 2.4E-44 370.7 23.4 212 1220-1443 1-234 (241)
150 PRK13635 cbiO cobalt transport 100.0 1.4E-39 3E-44 376.6 24.7 215 1219-1444 5-230 (279)
151 cd03250 ABCC_MRP_domain1 Domai 100.0 1.7E-39 3.6E-44 359.6 24.2 199 1220-1431 1-204 (204)
152 cd03296 ABC_CysA_sulfate_impor 100.0 1.9E-39 4.1E-44 368.0 25.3 212 1220-1446 3-229 (239)
153 TIGR00960 3a0501s02 Type II (G 100.0 8.3E-40 1.8E-44 365.4 21.6 202 1220-1432 2-216 (216)
154 TIGR00972 3a0107s01c2 phosphat 100.0 2.1E-39 4.6E-44 369.5 25.2 221 1220-1449 2-238 (247)
155 cd03291 ABCC_CFTR1 The CFTR su 100.0 7.1E-39 1.5E-43 369.1 29.3 218 1217-1452 37-255 (282)
156 cd03219 ABC_Mj1267_LivG_branch 100.0 1.4E-39 3.1E-44 368.6 22.8 212 1220-1444 1-233 (236)
157 PRK14247 phosphate ABC transpo 100.0 2.6E-39 5.6E-44 369.6 25.1 223 1219-1450 3-241 (250)
158 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.6E-39 3.4E-44 369.4 23.1 220 1220-1449 1-231 (242)
159 TIGR03265 PhnT2 putative 2-ami 100.0 1.6E-39 3.5E-44 385.7 24.1 217 1219-1450 4-231 (353)
160 cd03258 ABC_MetN_methionine_tr 100.0 1.8E-39 3.9E-44 367.0 23.3 214 1220-1444 2-231 (233)
161 TIGR01186 proV glycine betaine 100.0 1.1E-39 2.5E-44 386.1 22.6 205 1234-1449 6-225 (363)
162 PRK14259 phosphate ABC transpo 100.0 4.4E-39 9.5E-44 370.9 26.6 222 1216-1446 10-256 (269)
163 PRK14235 phosphate transporter 100.0 4.1E-39 8.9E-44 370.9 25.9 223 1216-1447 16-255 (267)
164 PRK13646 cbiO cobalt transport 100.0 2.5E-39 5.4E-44 376.0 24.1 215 1220-1444 3-236 (286)
165 TIGR02315 ABC_phnC phosphonate 100.0 2.4E-39 5.2E-44 368.4 23.4 211 1220-1442 2-234 (243)
166 PRK14267 phosphate ABC transpo 100.0 2.9E-39 6.2E-44 369.8 24.2 222 1219-1449 4-243 (253)
167 PRK13643 cbiO cobalt transport 100.0 2.9E-39 6.3E-44 375.6 24.3 214 1220-1444 2-234 (288)
168 PRK13636 cbiO cobalt transport 100.0 3.2E-39 6.9E-44 374.5 24.4 214 1219-1444 5-232 (283)
169 PRK13632 cbiO cobalt transport 100.0 4.7E-39 1E-43 371.2 25.5 215 1219-1444 7-232 (271)
170 cd03259 ABC_Carb_Solutes_like 100.0 2E-39 4.3E-44 361.5 21.6 202 1220-1436 1-213 (213)
171 PRK10851 sulfate/thiosulfate t 100.0 4.8E-39 1E-43 381.7 26.0 216 1219-1449 2-232 (353)
172 PRK11629 lolD lipoprotein tran 100.0 4.3E-39 9.2E-44 363.8 23.6 208 1219-1437 5-228 (233)
173 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.9E-39 6.4E-44 372.3 22.7 217 1221-1450 26-257 (269)
174 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.8E-39 1.3E-43 363.4 24.6 211 1220-1444 2-222 (236)
175 PRK11308 dppF dipeptide transp 100.0 6.7E-39 1.5E-43 377.4 25.9 225 1219-1453 5-254 (327)
176 cd03224 ABC_TM1139_LivF_branch 100.0 3.4E-39 7.3E-44 362.0 22.3 212 1220-1443 1-221 (222)
177 cd03247 ABCC_cytochrome_bd The 100.0 3.9E-39 8.4E-44 348.7 21.9 178 1220-1436 1-178 (178)
178 PRK15079 oligopeptide ABC tran 100.0 8.2E-39 1.8E-43 376.9 26.3 223 1219-1451 8-259 (331)
179 PRK13640 cbiO cobalt transport 100.0 9.2E-39 2E-43 370.5 26.2 216 1218-1444 4-233 (282)
180 PRK14245 phosphate ABC transpo 100.0 5.6E-39 1.2E-43 366.7 23.8 222 1219-1449 3-240 (250)
181 PRK14244 phosphate ABC transpo 100.0 3.3E-39 7E-44 368.9 21.8 221 1220-1449 6-243 (251)
182 cd03266 ABC_NatA_sodium_export 100.0 5.3E-39 1.1E-43 359.4 23.0 205 1220-1436 2-218 (218)
183 PRK13537 nodulation ABC transp 100.0 4.9E-39 1.1E-43 376.1 23.6 213 1218-1444 6-228 (306)
184 PRK14237 phosphate transporter 100.0 1E-38 2.3E-43 367.5 25.9 220 1218-1446 19-254 (267)
185 PRK10619 histidine/lysine/argi 100.0 8.5E-39 1.9E-43 366.6 25.1 218 1217-1446 3-244 (257)
186 PRK14268 phosphate ABC transpo 100.0 6.2E-39 1.3E-43 367.8 23.9 222 1219-1449 12-248 (258)
187 PRK09536 btuD corrinoid ABC tr 100.0 6E-39 1.3E-43 384.3 24.8 213 1219-1444 3-229 (402)
188 PRK11000 maltose/maltodextrin 100.0 6.4E-39 1.4E-43 383.6 24.7 216 1219-1449 3-229 (369)
189 cd03265 ABC_DrrA DrrA is the A 100.0 7.2E-39 1.6E-43 358.8 23.6 208 1220-1441 1-219 (220)
190 PRK13652 cbiO cobalt transport 100.0 8.1E-39 1.7E-43 370.2 24.8 213 1220-1444 4-228 (277)
191 PRK14251 phosphate ABC transpo 100.0 6.5E-39 1.4E-43 366.5 23.7 222 1219-1449 4-241 (251)
192 TIGR03258 PhnT 2-aminoethylpho 100.0 5.6E-39 1.2E-43 381.5 23.9 218 1217-1449 3-234 (362)
193 PRK09452 potA putrescine/sperm 100.0 9.9E-39 2.1E-43 380.6 26.0 217 1218-1449 13-240 (375)
194 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.8E-39 8.3E-44 360.6 20.9 202 1220-1432 1-218 (218)
195 PRK14262 phosphate ABC transpo 100.0 9.3E-39 2E-43 365.0 24.5 224 1219-1451 3-242 (250)
196 PRK13634 cbiO cobalt transport 100.0 6.7E-39 1.5E-43 372.9 23.7 215 1220-1444 3-236 (290)
197 TIGR03005 ectoine_ehuA ectoine 100.0 1.1E-38 2.4E-43 364.7 25.0 217 1220-1449 1-242 (252)
198 PRK13651 cobalt transporter AT 100.0 8.4E-39 1.8E-43 373.3 24.5 215 1219-1444 2-255 (305)
199 cd03226 ABC_cobalt_CbiO_domain 100.0 5.6E-39 1.2E-43 355.7 21.8 198 1221-1433 1-205 (205)
200 PRK14239 phosphate transporter 100.0 9.5E-39 2.1E-43 365.4 24.4 220 1219-1447 5-240 (252)
201 COG3840 ThiQ ABC-type thiamine 100.0 6E-39 1.3E-43 325.9 20.0 211 1220-1447 2-223 (231)
202 PRK14274 phosphate ABC transpo 100.0 1.4E-38 3E-43 365.3 25.8 222 1219-1449 12-249 (259)
203 PRK13642 cbiO cobalt transport 100.0 1.3E-38 2.8E-43 368.5 25.6 215 1219-1444 4-230 (277)
204 COG1116 TauB ABC-type nitrate/ 100.0 7.8E-39 1.7E-43 347.3 22.2 221 1219-1458 3-239 (248)
205 PRK14266 phosphate ABC transpo 100.0 1.1E-38 2.5E-43 364.2 24.8 223 1219-1450 3-241 (250)
206 PRK14256 phosphate ABC transpo 100.0 1.5E-38 3.3E-43 363.6 25.8 224 1217-1449 2-242 (252)
207 PRK13644 cbiO cobalt transport 100.0 1.2E-38 2.5E-43 368.1 25.0 213 1220-1444 2-225 (274)
208 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.7E-38 3.6E-43 364.8 26.2 221 590-820 2-236 (275)
209 PRK11831 putative ABC transpor 100.0 1.7E-38 3.7E-43 366.2 26.3 223 1219-1454 7-244 (269)
210 COG1116 TauB ABC-type nitrate/ 100.0 4.9E-39 1.1E-43 348.9 20.1 188 590-797 3-211 (248)
211 TIGR03411 urea_trans_UrtD urea 100.0 9.7E-39 2.1E-43 363.1 23.5 211 1220-1443 3-231 (242)
212 cd03264 ABC_drug_resistance_li 100.0 7E-39 1.5E-43 356.5 21.9 202 1220-1436 1-211 (211)
213 PRK14240 phosphate transporter 100.0 1.9E-38 4.2E-43 362.4 25.9 223 1218-1449 2-240 (250)
214 cd03268 ABC_BcrA_bacitracin_re 100.0 9.6E-39 2.1E-43 354.7 22.7 202 1220-1436 1-208 (208)
215 PRK14260 phosphate ABC transpo 100.0 1.4E-38 3E-43 365.2 24.7 222 1218-1448 6-248 (259)
216 PRK14249 phosphate ABC transpo 100.0 2.1E-38 4.5E-43 362.2 26.0 219 1219-1446 4-238 (251)
217 COG1125 OpuBA ABC-type proline 100.0 3.8E-39 8.3E-44 343.9 18.4 210 591-818 2-235 (309)
218 PRK13633 cobalt transporter AT 100.0 1.5E-38 3.3E-43 368.5 24.9 215 1219-1444 4-234 (280)
219 COG4178 ABC-type uncharacteriz 100.0 7.5E-36 1.6E-40 361.8 49.2 479 928-1429 87-588 (604)
220 PRK13648 cbiO cobalt transport 100.0 1.1E-38 2.4E-43 367.8 23.6 215 1219-1444 7-232 (269)
221 PRK14248 phosphate ABC transpo 100.0 2E-38 4.4E-43 365.6 25.6 221 1219-1448 21-257 (268)
222 PRK11022 dppD dipeptide transp 100.0 1.8E-38 4E-43 373.9 25.5 227 1219-1453 3-253 (326)
223 cd03290 ABCC_SUR1_N The SUR do 100.0 1.8E-38 4E-43 355.0 24.2 210 1221-1431 2-218 (218)
224 cd03218 ABC_YhbG The ABC trans 100.0 1.1E-38 2.4E-43 360.3 22.6 211 1220-1443 1-222 (232)
225 TIGR02211 LolD_lipo_ex lipopro 100.0 1.7E-38 3.6E-43 356.1 23.9 203 1220-1433 2-220 (221)
226 PRK10575 iron-hydroxamate tran 100.0 1.4E-38 3E-43 366.2 23.6 212 1219-1443 11-237 (265)
227 PRK14236 phosphate transporter 100.0 2.6E-38 5.6E-43 365.2 25.9 221 1217-1446 23-259 (272)
228 cd03225 ABC_cobalt_CbiO_domain 100.0 7.9E-39 1.7E-43 356.2 20.8 200 1221-1431 1-211 (211)
229 TIGR02769 nickel_nikE nickel i 100.0 2.5E-38 5.5E-43 364.1 25.7 221 1220-1451 3-247 (265)
230 PRK09493 glnQ glutamine ABC tr 100.0 2.1E-38 4.6E-43 359.8 24.6 213 1220-1445 2-227 (240)
231 COG1135 AbcC ABC-type metal io 100.0 8.5E-39 1.8E-43 352.0 20.5 210 591-816 2-239 (339)
232 COG3842 PotA ABC-type spermidi 100.0 8.6E-39 1.9E-43 369.3 21.6 223 1218-1458 4-238 (352)
233 PRK14238 phosphate transporter 100.0 3.8E-38 8.2E-43 363.5 27.0 225 1215-1448 20-260 (271)
234 PRK14270 phosphate ABC transpo 100.0 3E-38 6.4E-43 360.9 25.5 219 1219-1446 4-238 (251)
235 PRK11124 artP arginine transpo 100.0 2.1E-38 4.6E-43 360.2 24.2 212 1220-1444 3-231 (242)
236 PRK14243 phosphate transporter 100.0 3.3E-38 7.2E-43 362.7 25.8 220 1219-1447 10-252 (264)
237 PRK11231 fecE iron-dicitrate t 100.0 1.9E-38 4.2E-43 363.3 23.7 211 1220-1443 3-227 (255)
238 PRK14252 phosphate ABC transpo 100.0 2.7E-38 5.8E-43 364.0 25.0 224 1215-1447 12-253 (265)
239 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.2E-38 2.6E-43 357.0 21.5 203 1220-1438 1-218 (220)
240 PRK14254 phosphate ABC transpo 100.0 4.2E-38 9.1E-43 365.1 26.7 221 1218-1447 38-273 (285)
241 cd03301 ABC_MalK_N The N-termi 100.0 1.2E-38 2.7E-43 355.1 21.4 202 1220-1436 1-213 (213)
242 cd03292 ABC_FtsE_transporter F 100.0 1.3E-38 2.8E-43 355.2 21.5 201 1220-1432 1-214 (214)
243 PRK10070 glycine betaine trans 100.0 2E-38 4.3E-43 379.6 24.5 204 1235-1449 42-260 (400)
244 PRK11264 putative amino-acid A 100.0 2.6E-38 5.6E-43 361.4 24.4 215 1219-1446 3-236 (250)
245 cd03300 ABC_PotA_N PotA is an 100.0 1.6E-38 3.4E-43 358.8 22.2 211 1220-1445 1-222 (232)
246 PRK09473 oppD oligopeptide tra 100.0 2.9E-38 6.3E-43 372.4 25.3 227 1219-1453 12-261 (330)
247 TIGR02673 FtsE cell division A 100.0 1.1E-38 2.5E-43 355.7 20.7 200 1220-1431 2-214 (214)
248 PRK11614 livF leucine/isoleuci 100.0 3.1E-38 6.8E-43 357.7 24.6 212 1219-1443 5-226 (237)
249 PRK14261 phosphate ABC transpo 100.0 3.7E-38 7.9E-43 360.6 25.2 224 1219-1451 6-245 (253)
250 PRK13645 cbiO cobalt transport 100.0 2.3E-38 4.9E-43 368.9 23.8 217 1217-1444 4-241 (289)
251 PRK10253 iron-enterobactin tra 100.0 2.7E-38 5.8E-43 363.9 23.9 213 1218-1443 6-233 (265)
252 COG4615 PvdE ABC-type sideroph 100.0 1.6E-35 3.5E-40 331.0 45.0 471 928-1436 49-530 (546)
253 PRK11607 potG putrescine trans 100.0 2.9E-38 6.2E-43 377.4 24.7 218 1218-1450 18-246 (377)
254 PRK13649 cbiO cobalt transport 100.0 2.8E-38 6E-43 366.9 23.8 215 1220-1444 3-235 (280)
255 PRK13641 cbiO cobalt transport 100.0 3.3E-38 7.2E-43 366.8 24.3 215 1219-1444 2-235 (287)
256 cd03299 ABC_ModC_like Archeal 100.0 3.5E-38 7.6E-43 356.6 23.8 210 1220-1445 1-221 (235)
257 cd03246 ABCC_Protease_Secretio 100.0 2.7E-38 5.9E-43 340.4 21.8 172 1220-1432 1-173 (173)
258 PRK11247 ssuB aliphatic sulfon 100.0 7E-38 1.5E-42 357.3 26.3 204 1218-1439 11-219 (257)
259 PRK14258 phosphate ABC transpo 100.0 4.5E-38 9.8E-43 361.2 24.9 223 1218-1449 6-251 (261)
260 PRK13548 hmuV hemin importer A 100.0 5.9E-38 1.3E-42 359.4 25.7 211 1220-1443 3-230 (258)
261 TIGR03410 urea_trans_UrtE urea 100.0 1.6E-38 3.5E-43 358.4 20.5 211 1220-1442 1-220 (230)
262 PRK10895 lipopolysaccharide AB 100.0 5.3E-38 1.2E-42 356.7 24.8 212 1219-1443 3-226 (241)
263 TIGR01288 nodI ATP-binding ABC 100.0 3.8E-38 8.2E-43 369.1 24.2 212 1219-1444 4-225 (303)
264 PRK14271 phosphate ABC transpo 100.0 7.4E-38 1.6E-42 361.6 26.2 220 1219-1447 21-255 (276)
265 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.5E-38 9.7E-43 350.1 23.4 200 1220-1436 1-211 (211)
266 PRK14241 phosphate transporter 100.0 5E-38 1.1E-42 360.4 24.4 219 1219-1446 4-245 (258)
267 PRK10584 putative ABC transpor 100.0 5.2E-38 1.1E-42 353.9 24.0 206 1219-1435 6-227 (228)
268 PRK14265 phosphate ABC transpo 100.0 8.6E-38 1.9E-42 360.9 26.3 220 1218-1446 19-261 (274)
269 PRK14263 phosphate ABC transpo 100.0 7.2E-38 1.6E-42 359.0 25.5 222 1219-1449 8-251 (261)
270 TIGR00968 3a0106s01 sulfate AB 100.0 6.7E-38 1.5E-42 354.7 24.9 211 1220-1445 1-222 (237)
271 PRK13536 nodulation factor exp 100.0 3.3E-38 7.1E-43 372.7 22.8 212 1219-1444 41-262 (340)
272 PRK14253 phosphate ABC transpo 100.0 7.4E-38 1.6E-42 357.3 25.0 219 1219-1446 3-236 (249)
273 PRK13638 cbiO cobalt transport 100.0 4.2E-38 9.1E-43 363.4 23.2 212 1220-1444 2-226 (271)
274 PRK14272 phosphate ABC transpo 100.0 6.6E-38 1.4E-42 358.5 24.5 223 1219-1450 4-243 (252)
275 cd03235 ABC_Metallic_Cations A 100.0 2.6E-38 5.6E-43 352.6 20.5 197 1221-1436 1-213 (213)
276 PRK15112 antimicrobial peptide 100.0 5.4E-38 1.2E-42 361.6 23.8 226 1219-1455 4-252 (267)
277 TIGR03522 GldA_ABC_ATP gliding 100.0 5E-38 1.1E-42 367.5 23.7 211 1220-1444 3-222 (301)
278 PRK13639 cbiO cobalt transport 100.0 5.9E-38 1.3E-42 362.6 24.0 213 1220-1444 2-227 (275)
279 PRK15093 antimicrobial peptide 100.0 8.1E-38 1.8E-42 369.6 25.5 226 1219-1452 3-257 (330)
280 PRK11300 livG leucine/isoleuci 100.0 7.5E-38 1.6E-42 358.6 24.5 213 1219-1444 5-244 (255)
281 PRK10771 thiQ thiamine transpo 100.0 1.3E-37 2.9E-42 351.4 26.0 208 1220-1444 2-220 (232)
282 PRK14264 phosphate ABC transpo 100.0 9.9E-38 2.2E-42 365.5 25.8 220 1217-1445 43-291 (305)
283 PRK14275 phosphate ABC transpo 100.0 8.5E-38 1.8E-42 363.0 25.0 223 1218-1449 38-276 (286)
284 PRK14255 phosphate ABC transpo 100.0 7.8E-38 1.7E-42 357.8 24.2 222 1219-1449 5-242 (252)
285 cd03257 ABC_NikE_OppD_transpor 100.0 9.1E-38 2E-42 351.9 24.3 207 1220-1436 2-228 (228)
286 TIGR03873 F420-0_ABC_ATP propo 100.0 7.2E-38 1.6E-42 358.7 23.8 211 1220-1443 2-226 (256)
287 PRK10908 cell division protein 100.0 1.2E-37 2.6E-42 349.4 24.8 202 1220-1433 2-216 (222)
288 cd03269 ABC_putative_ATPase Th 100.0 4.4E-38 9.6E-43 349.9 20.8 200 1220-1436 1-210 (210)
289 TIGR03415 ABC_choXWV_ATP choli 100.0 7.9E-38 1.7E-42 371.8 23.8 206 1234-1450 37-261 (382)
290 TIGR01277 thiQ thiamine ABC tr 100.0 1.2E-37 2.6E-42 347.1 23.1 201 1220-1437 1-212 (213)
291 COG1120 FepC ABC-type cobalami 100.0 7.8E-38 1.7E-42 346.8 21.3 199 590-808 2-228 (258)
292 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.7E-37 3.6E-42 342.2 23.6 198 589-808 3-227 (254)
293 cd03262 ABC_HisP_GlnQ_permease 100.0 7.6E-38 1.6E-42 348.8 21.0 200 1220-1432 1-213 (213)
294 PRK11701 phnK phosphonate C-P 100.0 1.9E-37 4.2E-42 355.6 24.9 221 1219-1451 6-249 (258)
295 COG1131 CcmA ABC-type multidru 100.0 7.7E-38 1.7E-42 362.5 21.7 213 1219-1444 4-227 (293)
296 PRK14246 phosphate ABC transpo 100.0 1.9E-37 4.1E-42 354.7 24.6 224 1218-1450 9-248 (257)
297 TIGR01188 drrA daunorubicin re 100.0 9.5E-38 2E-42 365.6 22.2 203 1228-1444 2-214 (302)
298 PRK10418 nikD nickel transport 100.0 2.4E-37 5.2E-42 353.9 24.8 223 1219-1454 4-242 (254)
299 cd03291 ABCC_CFTR1 The CFTR su 100.0 9.1E-37 2E-41 351.7 29.6 231 565-808 16-247 (282)
300 PRK11144 modC molybdate transp 100.0 2.2E-37 4.7E-42 368.8 24.5 214 1220-1449 2-224 (352)
301 COG1127 Ttg2A ABC-type transpo 100.0 2.8E-37 6E-42 329.4 22.5 203 588-811 6-238 (263)
302 PRK10247 putative ABC transpor 100.0 1.4E-37 3.1E-42 349.3 21.6 209 1219-1439 7-223 (225)
303 TIGR01978 sufC FeS assembly AT 100.0 1.7E-37 3.6E-42 353.3 22.3 212 1220-1442 1-233 (243)
304 PRK13547 hmuV hemin importer A 100.0 3.4E-37 7.4E-42 354.6 24.7 211 1220-1443 2-244 (272)
305 PRK00349 uvrA excinuclease ABC 100.0 2E-36 4.3E-41 391.5 33.2 111 1345-1455 818-939 (943)
306 COG3839 MalK ABC-type sugar tr 100.0 2.2E-37 4.8E-42 355.8 21.7 204 590-814 3-229 (338)
307 COG0410 LivF ABC-type branched 100.0 3.2E-37 7E-42 329.0 21.1 215 1219-1445 3-228 (237)
308 PRK09984 phosphonate/organopho 100.0 6.4E-37 1.4E-41 352.1 24.9 210 1219-1441 4-240 (262)
309 COG1117 PstB ABC-type phosphat 100.0 1.2E-37 2.7E-42 325.0 16.9 205 589-810 6-239 (253)
310 PRK11248 tauB taurine transpor 100.0 4.4E-37 9.5E-42 351.3 22.8 201 1220-1438 2-215 (255)
311 TIGR03740 galliderm_ABC gallid 100.0 1.1E-36 2.3E-41 341.9 24.9 204 1220-1440 1-210 (223)
312 cd03250 ABCC_MRP_domain1 Domai 100.0 8.6E-37 1.9E-41 337.9 23.4 200 591-796 1-204 (204)
313 cd03228 ABCC_MRP_Like The MRP 100.0 5.7E-37 1.2E-41 329.5 21.3 171 1220-1431 1-171 (171)
314 TIGR02982 heterocyst_DevA ABC 100.0 4.2E-37 9.1E-42 344.4 20.8 202 1220-1432 2-219 (220)
315 COG1118 CysA ABC-type sulfate/ 100.0 2.2E-37 4.7E-42 339.8 18.0 205 590-815 2-234 (345)
316 cd03252 ABCC_Hemolysin The ABC 100.0 2.2E-36 4.8E-41 342.6 26.2 210 591-808 1-225 (237)
317 TIGR02142 modC_ABC molybdenum 100.0 7.7E-37 1.7E-41 364.7 23.5 212 1224-1450 4-228 (354)
318 COG1118 CysA ABC-type sulfate/ 100.0 3.5E-37 7.6E-42 338.2 18.7 216 1219-1449 2-233 (345)
319 KOG0066 eIF2-interacting prote 100.0 4.3E-37 9.3E-42 344.4 19.4 192 1219-1435 586-782 (807)
320 PRK10419 nikE nickel transport 100.0 1.6E-36 3.5E-41 349.3 24.6 223 1219-1452 3-249 (268)
321 COG3842 PotA ABC-type spermidi 100.0 5.3E-37 1.2E-41 354.5 20.4 208 589-816 4-234 (352)
322 COG1137 YhbG ABC-type (unclass 100.0 6.3E-38 1.4E-42 323.5 11.1 215 1218-1445 3-230 (243)
323 TIGR02323 CP_lyasePhnK phospho 100.0 2.6E-36 5.7E-41 345.4 25.7 222 1219-1452 3-247 (253)
324 cd03230 ABC_DR_subfamily_A Thi 100.0 1.1E-36 2.4E-41 328.0 20.8 170 1220-1432 1-173 (173)
325 cd03229 ABC_Class3 This class 100.0 1.4E-36 3.1E-41 328.6 21.5 172 1220-1431 1-178 (178)
326 COG0444 DppD ABC-type dipeptid 100.0 8.9E-37 1.9E-41 342.2 20.3 229 1220-1456 2-256 (316)
327 PRK09544 znuC high-affinity zi 100.0 2.3E-36 4.9E-41 344.2 24.0 208 1219-1453 4-217 (251)
328 COG4555 NatA ABC-type Na+ tran 100.0 6.2E-37 1.3E-41 316.6 17.3 213 1220-1445 2-224 (245)
329 COG1245 Predicted ATPase, RNas 100.0 1E-35 2.2E-40 338.4 28.5 175 1243-1442 363-546 (591)
330 cd03217 ABC_FeS_Assembly ABC-t 100.0 2.2E-36 4.8E-41 333.2 22.5 185 1220-1442 1-192 (200)
331 COG3840 ThiQ ABC-type thiamine 100.0 1.1E-36 2.3E-41 309.5 18.2 197 591-809 2-220 (231)
332 cd03234 ABCG_White The White s 100.0 9.9E-37 2.2E-41 342.8 19.5 203 1220-1436 4-226 (226)
333 COG1136 SalX ABC-type antimicr 100.0 3.2E-36 7E-41 327.7 22.6 193 591-798 2-221 (226)
334 PRK15056 manganese/iron transp 100.0 3.1E-36 6.7E-41 348.0 23.9 208 1219-1443 6-230 (272)
335 cd03297 ABC_ModC_molybdenum_tr 100.0 2.4E-36 5.2E-41 336.9 21.7 200 1220-1436 2-214 (214)
336 cd03288 ABCC_SUR2 The SUR doma 100.0 8.4E-36 1.8E-40 341.6 26.5 214 589-810 18-245 (257)
337 cd03254 ABCC_Glucan_exporter_l 100.0 6.6E-36 1.4E-40 337.0 24.9 210 590-808 2-226 (229)
338 cd03233 ABC_PDR_domain1 The pl 100.0 3E-36 6.6E-41 332.6 21.4 190 1219-1436 3-202 (202)
339 cd03213 ABCG_EPDR ABCG transpo 100.0 2.8E-36 6.1E-41 330.7 20.2 182 1219-1436 3-194 (194)
340 cd03215 ABC_Carb_Monos_II This 100.0 2.7E-36 5.8E-41 327.7 19.6 172 1219-1432 4-182 (182)
341 CHL00131 ycf16 sulfate ABC tra 100.0 6.6E-36 1.4E-40 342.0 23.5 212 1219-1441 7-239 (252)
342 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.2E-35 2.6E-40 336.9 25.4 211 591-808 1-226 (238)
343 cd03251 ABCC_MsbA MsbA is an e 100.0 1.2E-35 2.6E-40 336.0 25.3 210 591-808 1-225 (234)
344 cd03214 ABC_Iron-Siderophores_ 100.0 4.1E-36 8.9E-41 325.6 20.2 177 1221-1436 1-180 (180)
345 TIGR02770 nickel_nikD nickel i 100.0 3.6E-36 7.7E-41 339.2 20.4 206 1236-1451 1-223 (230)
346 TIGR03608 L_ocin_972_ABC putat 100.0 2.8E-36 6E-41 334.5 19.1 193 1222-1427 1-206 (206)
347 cd03253 ABCC_ATM1_transporter 100.0 2E-35 4.3E-40 334.7 26.1 209 591-808 1-224 (236)
348 cd03244 ABCC_MRP_domain2 Domai 100.0 1.6E-35 3.5E-40 332.0 24.9 205 590-802 2-220 (221)
349 cd03223 ABCD_peroxisomal_ALDP 100.0 6.9E-36 1.5E-40 319.2 20.7 164 1220-1431 1-164 (166)
350 cd03232 ABC_PDR_domain2 The pl 100.0 4.2E-36 9.1E-41 328.9 19.5 181 1219-1436 3-192 (192)
351 PRK11650 ugpC glycerol-3-phosp 100.0 1.1E-35 2.4E-40 353.4 24.6 202 590-811 3-227 (356)
352 PRK03695 vitamin B12-transport 100.0 1.1E-35 2.4E-40 338.7 22.9 205 1221-1443 2-222 (248)
353 COG1122 CbiO ABC-type cobalt t 100.0 7.3E-36 1.6E-40 331.8 20.6 199 590-808 3-228 (235)
354 COG3638 ABC-type phosphate/pho 100.0 4.3E-36 9.3E-41 319.5 17.1 201 589-808 2-237 (258)
355 TIGR02314 ABC_MetN D-methionin 100.0 1.5E-35 3.3E-40 349.3 23.3 204 591-811 2-233 (343)
356 COG1123 ATPase components of v 100.0 1.1E-35 2.5E-40 356.1 22.3 229 1219-1456 5-257 (539)
357 cd03245 ABCC_bacteriocin_expor 100.0 3.5E-35 7.6E-40 329.1 24.9 204 590-801 2-220 (220)
358 TIGR01186 proV glycine betaine 100.0 1.1E-35 2.4E-40 352.1 21.0 192 611-814 6-225 (363)
359 TIGR01184 ntrCD nitrate transp 100.0 1.4E-35 3.1E-40 334.1 20.6 190 1237-1442 1-203 (230)
360 COG0411 LivG ABC-type branched 100.0 3.7E-36 8E-41 323.3 15.0 213 1220-1445 5-241 (250)
361 cd03267 ABC_NatA_like Similar 100.0 1.6E-35 3.4E-40 335.1 20.7 191 1234-1436 34-236 (236)
362 cd03231 ABC_CcmA_heme_exporter 100.0 3.1E-35 6.7E-40 324.5 22.2 194 1220-1427 1-198 (201)
363 TIGR00630 uvra excinuclease AB 100.0 1.7E-34 3.7E-39 372.9 32.6 216 1219-1441 612-923 (924)
364 PRK09580 sufC cysteine desulfu 100.0 2.6E-35 5.6E-40 336.3 22.3 210 1220-1441 2-233 (248)
365 COG4619 ABC-type uncharacteriz 100.0 7E-36 1.5E-40 299.4 15.1 198 1228-1435 10-215 (223)
366 PRK15439 autoinducer 2 ABC tra 100.0 4.5E-35 9.7E-40 367.2 25.5 212 1219-1443 11-229 (510)
367 PRK13631 cbiO cobalt transport 100.0 5.6E-35 1.2E-39 343.1 24.2 206 588-808 19-265 (320)
368 PRK11432 fbpC ferric transport 100.0 4.8E-35 1E-39 346.9 23.7 203 590-813 6-231 (351)
369 cd03216 ABC_Carb_Monos_I This 100.0 5.8E-35 1.3E-39 311.1 22.0 159 1220-1434 1-162 (163)
370 COG1124 DppF ABC-type dipeptid 100.0 5.6E-35 1.2E-39 313.8 21.8 204 590-809 3-232 (252)
371 PRK00635 excinuclease ABC subu 100.0 3.5E-34 7.6E-39 382.9 34.4 207 1219-1443 600-906 (1809)
372 PRK13549 xylose transporter AT 100.0 3.3E-35 7.2E-40 368.6 23.2 212 1219-1443 5-232 (506)
373 COG4615 PvdE ABC-type sideroph 100.0 3.7E-32 8E-37 304.2 44.4 503 266-800 4-529 (546)
374 cd03261 ABC_Org_Solvent_Resist 100.0 5.3E-35 1.2E-39 330.9 22.2 197 591-808 1-226 (235)
375 PRK09700 D-allose transporter 100.0 3.2E-35 6.9E-40 369.3 22.4 212 1219-1443 5-234 (510)
376 PRK10762 D-ribose transporter 100.0 4.4E-35 9.5E-40 367.1 23.3 212 1219-1443 4-230 (501)
377 TIGR03265 PhnT2 putative 2-ami 100.0 6.8E-35 1.5E-39 346.2 23.6 205 590-814 4-230 (353)
378 PRK13538 cytochrome c biogenes 100.0 5.6E-35 1.2E-39 323.3 21.3 194 1220-1427 2-202 (204)
379 PRK10261 glutathione transport 100.0 4.2E-35 9.1E-40 374.6 22.8 223 1219-1449 12-264 (623)
380 PRK09452 potA putrescine/sperm 100.0 1E-34 2.3E-39 346.2 24.5 202 589-811 13-237 (375)
381 cd03290 ABCC_SUR1_N The SUR do 100.0 1.2E-34 2.5E-39 324.3 23.0 197 592-796 2-218 (218)
382 PRK13643 cbiO cobalt transport 100.0 1.1E-34 2.4E-39 337.3 23.2 203 591-808 2-233 (288)
383 PRK10938 putative molybdenum t 100.0 8.8E-35 1.9E-39 363.8 23.6 212 1219-1444 3-225 (490)
384 cd03296 ABC_CysA_sulfate_impor 100.0 1.8E-34 3.8E-39 327.4 23.9 197 591-808 3-226 (239)
385 PRK13637 cbiO cobalt transport 100.0 1.2E-34 2.5E-39 336.9 22.7 205 590-808 2-234 (287)
386 PRK13634 cbiO cobalt transport 100.0 1.3E-34 2.8E-39 337.0 23.0 203 591-808 3-235 (290)
387 COG4608 AppF ABC-type oligopep 100.0 7.7E-35 1.7E-39 320.3 19.6 198 1219-1456 4-212 (268)
388 PRK15134 microcin C ABC transp 100.0 1.7E-34 3.7E-39 364.1 25.5 220 1219-1446 5-249 (529)
389 PRK11000 maltose/maltodextrin 100.0 1.7E-34 3.6E-39 345.6 24.0 201 590-811 3-226 (369)
390 TIGR03258 PhnT 2-aminoethylpho 100.0 1.5E-34 3.2E-39 343.7 23.1 203 589-811 4-231 (362)
391 PRK10851 sulfate/thiosulfate t 100.0 2.2E-34 4.8E-39 341.8 24.5 201 590-811 2-229 (353)
392 cd03260 ABC_PstB_phosphate_tra 100.0 1.4E-34 3.1E-39 325.7 21.4 194 591-805 1-226 (227)
393 COG4178 ABC-type uncharacteriz 100.0 4.6E-31 9.9E-36 320.3 53.2 436 339-793 107-587 (604)
394 cd03219 ABC_Mj1267_LivG_branch 100.0 1.7E-34 3.6E-39 327.1 21.8 197 591-808 1-232 (236)
395 PRK13650 cbiO cobalt transport 100.0 1.9E-34 4.2E-39 333.9 22.6 201 590-808 4-229 (279)
396 PRK13543 cytochrome c biogenes 100.0 2.5E-34 5.3E-39 320.5 22.5 195 1219-1429 11-212 (214)
397 PRK13651 cobalt transporter AT 100.0 2.6E-34 5.6E-39 335.6 23.6 204 590-808 2-254 (305)
398 TIGR00972 3a0107s01c2 phosphat 100.0 2.8E-34 6.1E-39 327.4 23.3 202 590-808 1-232 (247)
399 COG4175 ProV ABC-type proline/ 100.0 1.3E-34 2.9E-39 317.4 19.5 220 1219-1449 4-260 (386)
400 PRK14242 phosphate transporter 100.0 3E-34 6.4E-39 328.5 23.4 203 589-808 5-237 (253)
401 PRK14250 phosphate ABC transpo 100.0 4.9E-34 1.1E-38 324.0 25.0 199 590-808 3-221 (241)
402 COG4559 ABC-type hemin transpo 100.0 1.8E-34 3.9E-39 300.5 19.5 213 1220-1445 2-232 (259)
403 TIGR02324 CP_lyasePhnL phospho 100.0 1.7E-34 3.7E-39 324.4 20.9 198 1220-1427 2-222 (224)
404 PRK13540 cytochrome c biogenes 100.0 1.7E-34 3.8E-39 318.4 20.6 192 1220-1425 2-197 (200)
405 cd03259 ABC_Carb_Solutes_like 100.0 2E-34 4.3E-39 321.3 21.1 190 591-801 1-213 (213)
406 PRK11288 araG L-arabinose tran 100.0 1.9E-34 4.1E-39 361.3 23.4 207 1219-1438 4-224 (501)
407 PRK14269 phosphate ABC transpo 100.0 3.5E-34 7.6E-39 326.3 23.4 202 590-808 2-230 (246)
408 PRK13647 cbiO cobalt transport 100.0 2.3E-34 5E-39 332.4 22.0 197 590-806 4-225 (274)
409 TIGR00960 3a0501s02 Type II (G 100.0 1.7E-34 3.7E-39 322.5 20.2 188 591-797 2-216 (216)
410 TIGR01257 rim_protein retinal- 100.0 1.8E-34 3.9E-39 391.5 24.4 215 1219-1445 928-1151(2272)
411 PRK14273 phosphate ABC transpo 100.0 5.3E-34 1.1E-38 326.5 24.6 203 589-808 6-238 (254)
412 COG4598 HisP ABC-type histidin 100.0 8.3E-35 1.8E-39 294.1 15.3 217 1219-1448 6-246 (256)
413 cd03265 ABC_DrrA DrrA is the A 100.0 2.7E-34 5.8E-39 321.8 21.2 195 591-806 1-219 (220)
414 cd03369 ABCC_NFT1 Domain 2 of 100.0 7E-34 1.5E-38 315.4 24.2 188 589-802 5-206 (207)
415 PRK13646 cbiO cobalt transport 100.0 3.4E-34 7.3E-39 333.1 22.4 204 590-808 2-235 (286)
416 PRK13539 cytochrome c biogenes 100.0 4.1E-34 8.9E-39 317.1 22.1 193 1220-1429 3-200 (207)
417 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.2E-34 7E-39 321.2 21.4 196 591-803 1-218 (220)
418 cd03248 ABCC_TAP TAP, the Tran 100.0 5.6E-34 1.2E-38 320.6 23.4 203 588-797 9-226 (226)
419 PRK10982 galactose/methyl gala 100.0 2.4E-34 5.1E-39 359.8 22.5 208 1222-1442 1-222 (491)
420 TIGR01189 ccmA heme ABC export 100.0 3.7E-34 8E-39 315.3 21.4 192 1220-1426 1-197 (198)
421 PRK11607 potG putrescine trans 100.0 4.9E-34 1.1E-38 341.1 24.0 205 588-812 17-243 (377)
422 TIGR02315 ABC_phnC phosphonate 100.0 4.5E-34 9.8E-39 325.1 22.6 196 591-806 2-233 (243)
423 COG2884 FtsE Predicted ATPase 100.0 2.7E-34 5.9E-39 294.9 18.4 191 591-801 2-219 (223)
424 cd03256 ABC_PhnC_transporter A 100.0 4.5E-34 9.7E-39 324.7 22.3 197 591-807 1-233 (241)
425 COG4175 ProV ABC-type proline/ 100.0 2.7E-34 5.9E-39 315.0 19.5 216 590-817 4-263 (386)
426 cd03268 ABC_BcrA_bacitracin_re 100.0 4.8E-34 1E-38 317.0 21.9 190 591-801 1-208 (208)
427 cd03263 ABC_subfamily_A The AB 100.0 4.9E-34 1.1E-38 319.8 22.1 197 591-806 1-219 (220)
428 PRK11153 metN DL-methionine tr 100.0 4.4E-34 9.5E-39 339.3 23.0 202 591-809 2-231 (343)
429 cd03226 ABC_cobalt_CbiO_domain 100.0 3E-34 6.6E-39 317.8 20.2 186 593-798 2-205 (205)
430 TIGR02633 xylG D-xylose ABC tr 100.0 3.4E-34 7.3E-39 359.4 23.1 211 1220-1442 2-229 (500)
431 PRK13537 nodulation ABC transp 100.0 5.9E-34 1.3E-38 333.3 23.3 199 589-808 6-227 (306)
432 PLN03211 ABC transporter G-25; 100.0 6.7E-34 1.5E-38 362.6 25.7 199 1234-1443 81-296 (659)
433 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.7E-34 8.1E-39 320.3 20.0 190 591-797 1-218 (218)
434 cd03235 ABC_Metallic_Cations A 100.0 5.6E-34 1.2E-38 317.7 21.1 187 593-801 2-213 (213)
435 PRK10744 pstB phosphate transp 100.0 1.4E-33 3.1E-38 323.9 24.6 203 589-808 12-244 (260)
436 cd03218 ABC_YhbG The ABC trans 100.0 8.7E-34 1.9E-38 320.4 22.4 197 591-808 1-222 (232)
437 cd03224 ABC_TM1139_LivF_branch 100.0 8.3E-34 1.8E-38 318.4 22.2 197 591-807 1-220 (222)
438 PRK13635 cbiO cobalt transport 100.0 1.1E-33 2.4E-38 327.4 23.8 201 589-808 4-229 (279)
439 PRK11247 ssuB aliphatic sulfon 100.0 1.1E-33 2.5E-38 322.7 23.5 195 589-804 11-219 (257)
440 PRK13644 cbiO cobalt transport 100.0 1.1E-33 2.3E-38 326.9 23.5 198 591-808 2-224 (274)
441 cd03301 ABC_MalK_N The N-termi 100.0 6.5E-34 1.4E-38 317.2 20.9 190 591-801 1-213 (213)
442 TIGR03771 anch_rpt_ABC anchore 100.0 3.3E-34 7.1E-39 321.5 18.5 186 1242-1444 1-202 (223)
443 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.1E-33 2.4E-38 320.3 22.7 197 591-808 2-221 (236)
444 cd03294 ABC_Pro_Gly_Bertaine T 100.0 6.8E-34 1.5E-38 327.7 21.4 185 611-808 37-250 (269)
445 cd03258 ABC_MetN_methionine_tr 100.0 1.1E-33 2.3E-38 319.9 22.5 201 591-808 2-230 (233)
446 PRK10535 macrolide transporter 100.0 8.5E-34 1.8E-38 363.8 24.5 213 1219-1442 4-231 (648)
447 TIGR01288 nodI ATP-binding ABC 100.0 1.2E-33 2.6E-38 331.2 23.6 199 589-808 3-224 (303)
448 PRK13636 cbiO cobalt transport 100.0 1.2E-33 2.6E-38 327.9 23.5 199 590-808 5-231 (283)
449 PRK11629 lolD lipoprotein tran 100.0 1E-33 2.3E-38 319.9 22.3 196 590-802 5-228 (233)
450 PRK13641 cbiO cobalt transport 100.0 1.2E-33 2.6E-38 328.6 23.4 204 590-808 2-234 (287)
451 PRK13546 teichoic acids export 100.0 1.2E-33 2.6E-38 323.5 22.8 207 1219-1449 4-238 (264)
452 PRK14235 phosphate transporter 100.0 1.5E-33 3.2E-38 324.8 23.5 205 587-808 16-251 (267)
453 TIGR01166 cbiO cobalt transpor 100.0 3.7E-34 7.9E-39 313.3 17.6 173 1234-1417 5-189 (190)
454 PRK14274 phosphate ABC transpo 100.0 1.7E-33 3.6E-38 323.2 23.7 203 589-808 11-243 (259)
455 cd03266 ABC_NatA_sodium_export 100.0 1.1E-33 2.4E-38 316.5 21.6 194 591-801 2-218 (218)
456 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.1E-33 2.4E-38 321.5 21.9 200 591-808 1-225 (242)
457 cd03264 ABC_drug_resistance_li 100.0 9.2E-34 2E-38 315.5 20.6 189 591-801 1-211 (211)
458 PRK09536 btuD corrinoid ABC tr 100.0 1.2E-33 2.7E-38 338.6 22.8 198 590-808 3-228 (402)
459 PRK14248 phosphate ABC transpo 100.0 2.2E-33 4.8E-38 323.7 24.1 203 589-808 20-252 (268)
460 PRK13545 tagH teichoic acids e 100.0 3.5E-33 7.5E-38 336.2 26.5 202 1219-1444 21-233 (549)
461 TIGR03269 met_CoM_red_A2 methy 100.0 6.7E-34 1.5E-38 358.2 21.4 211 1220-1443 1-258 (520)
462 PRK14239 phosphate transporter 100.0 2E-33 4.4E-38 321.4 23.4 202 590-808 5-236 (252)
463 PRK14251 phosphate ABC transpo 100.0 1.6E-33 3.4E-38 322.1 22.4 202 590-808 4-235 (251)
464 PRK14268 phosphate ABC transpo 100.0 1.9E-33 4.2E-38 322.4 23.2 203 589-808 11-242 (258)
465 PRK09493 glnQ glutamine ABC tr 100.0 2.5E-33 5.4E-38 318.3 23.8 197 591-808 2-225 (240)
466 PRK11831 putative ABC transpor 100.0 2.2E-33 4.8E-38 323.7 23.7 199 589-808 6-233 (269)
467 TIGR03415 ABC_choXWV_ATP choli 100.0 1.2E-33 2.6E-38 336.1 22.0 188 611-810 37-256 (382)
468 PRK14245 phosphate ABC transpo 100.0 1.7E-33 3.7E-38 321.5 22.4 202 590-808 3-234 (250)
469 PRK14259 phosphate ABC transpo 100.0 4.1E-33 8.9E-38 321.3 25.6 204 588-808 11-253 (269)
470 cd03247 ABCC_cytochrome_bd The 100.0 1.6E-33 3.5E-38 304.8 20.8 165 591-801 1-178 (178)
471 PRK13541 cytochrome c biogenes 100.0 1E-33 2.2E-38 310.9 19.5 188 1220-1425 2-193 (195)
472 PRK13536 nodulation factor exp 100.0 1.9E-33 4.2E-38 332.2 23.2 200 588-808 39-261 (340)
473 cd03269 ABC_putative_ATPase Th 100.0 1.5E-33 3.3E-38 313.4 21.0 190 591-801 1-210 (210)
474 PRK10619 histidine/lysine/argi 100.0 2.6E-33 5.6E-38 321.3 23.4 200 589-808 4-241 (257)
475 PRK14270 phosphate ABC transpo 100.0 3E-33 6.4E-38 319.8 23.8 202 590-808 4-235 (251)
476 PRK14237 phosphate transporter 100.0 3.2E-33 6.8E-38 322.0 24.0 204 588-808 18-251 (267)
477 PRK13640 cbiO cobalt transport 100.0 2.1E-33 4.5E-38 325.8 22.7 201 589-808 4-232 (282)
478 PRK13649 cbiO cobalt transport 100.0 1.9E-33 4.1E-38 326.4 22.3 204 590-808 2-234 (280)
479 PRK11264 putative amino-acid A 100.0 2.4E-33 5.2E-38 320.5 22.8 198 590-808 3-233 (250)
480 PRK14249 phosphate ABC transpo 100.0 3.8E-33 8.3E-38 318.9 24.3 202 590-808 4-235 (251)
481 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.6E-33 5.6E-38 311.9 22.2 188 591-801 1-211 (211)
482 TIGR03411 urea_trans_UrtD urea 100.0 2.5E-33 5.3E-38 318.8 22.5 197 591-808 3-231 (242)
483 PRK14247 phosphate ABC transpo 100.0 3.7E-33 8E-38 318.9 23.8 202 590-808 3-234 (250)
484 TIGR02211 LolD_lipo_ex lipopro 100.0 2.3E-33 4.9E-38 314.7 21.4 191 591-798 2-220 (221)
485 PRK14243 phosphate transporter 100.0 5E-33 1.1E-37 319.8 24.7 203 589-808 9-248 (264)
486 PRK11300 livG leucine/isoleuci 100.0 3.4E-33 7.4E-38 320.2 23.2 198 590-808 5-243 (255)
487 PRK11231 fecE iron-dicitrate t 100.0 3.5E-33 7.5E-38 319.9 23.2 197 591-808 3-227 (255)
488 TIGR03410 urea_trans_UrtE urea 100.0 2.6E-33 5.7E-38 316.0 21.8 197 591-807 1-220 (230)
489 PRK14240 phosphate transporter 100.0 4.6E-33 9.9E-38 318.1 23.9 202 590-808 3-234 (250)
490 PRK13632 cbiO cobalt transport 100.0 3.3E-33 7.1E-38 322.6 22.9 201 589-808 6-231 (271)
491 PRK13645 cbiO cobalt transport 100.0 2.8E-33 6.1E-38 326.2 22.6 205 589-808 5-240 (289)
492 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 1.9E-33 4.1E-38 315.5 20.3 193 1220-1436 23-224 (224)
493 PRK13548 hmuV hemin importer A 100.0 5.9E-33 1.3E-37 318.2 24.5 197 591-808 3-230 (258)
494 cd03292 ABC_FtsE_transporter F 100.0 2.3E-33 4.9E-38 313.1 20.5 187 591-797 1-214 (214)
495 PRK14267 phosphate ABC transpo 100.0 3.9E-33 8.4E-38 319.2 22.9 202 590-808 4-237 (253)
496 PRK10070 glycine betaine trans 100.0 2.7E-33 6E-38 335.4 22.5 209 590-810 4-256 (400)
497 PRK11124 artP arginine transpo 100.0 4.8E-33 1E-37 316.4 23.3 198 590-808 2-230 (242)
498 PRK15079 oligopeptide ABC tran 100.0 5.2E-33 1.1E-37 327.7 24.4 217 588-816 6-259 (331)
499 PRK10253 iron-enterobactin tra 100.0 5.1E-33 1.1E-37 320.1 23.7 201 587-808 4-233 (265)
500 TIGR02673 FtsE cell division A 100.0 2.2E-33 4.7E-38 313.2 19.8 186 591-796 2-214 (214)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.7e-273 Score=2598.24 Aligned_cols=1235 Identities=43% Similarity=0.738 Sum_probs=1152.8
Q ss_pred CCCcccCCH--hHHHHHHhHHHHHHhhccCCCCCCCCCCCCcCCcHHHHHHHHHHHHHhhcC---CCCChHHHHHHHHHH
Q 000475 201 ISTFASAGV--LSKITFHWLNQLFQRGRIQKLELLHIPPIPQSETANDASSLLEESLRKQKT---DATSLPQVIIHAVWK 275 (1470)
Q Consensus 201 ~~p~~~a~~--~s~~~f~W~~~l~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~---~~~~l~~~l~~~~~~ 275 (1470)
++|.+.++. +|+++|||++|++++|||++|+.+|+|+++++|+++.++++|++.|+++.+ ++|+++++++++||+
T Consensus 122 ~~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~~~~~psl~~al~~~f~~ 201 (1381)
T KOG0054|consen 122 PNPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGRSGKKPSLLRALLRTFGR 201 (1381)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhccccCCcHHHHHHHHHHHH
Confidence 445555555 999999999999999999999999999999999999999999999999854 358999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 276 SLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTV 355 (1470)
Q Consensus 276 ~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~rir~~L~~ 355 (1470)
++++.++++.+.+.+.|++|.+|+.+++|+++++. ..+. ||+++++++++.++++++.|||+|..+++|+|+|+++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~-~~~~-g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~ 279 (1381)
T KOG0054|consen 202 TFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRL-PLNN-GYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALIS 279 (1381)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCc-ccch-hHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHH
Confidence 99999999999999999999999999999998743 3444 999999999999999999999999999999999999999
Q ss_pred HHHHHhcccccCCC---CHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 000475 356 LIYKRSMAIKFAGP---SSGIIINMINVDVERIGDFFLYIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSN 432 (1470)
Q Consensus 356 ~iy~K~L~ls~~~~---~~G~ivnlms~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i~~~~~ 432 (1470)
+||+|+|++++.++ +.|+|+|+|++|++|+.++..++|.+|.+|+|+++++++||..+| +++++|++++++++|+|
T Consensus 280 ~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG-~sa~~G~~~~il~~p~n 358 (1381)
T KOG0054|consen 280 AIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLG-PSALAGVAVMVLLIPLN 358 (1381)
T ss_pred HHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHH
Confidence 99999999999886 899999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 433 TPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWASPTLV 512 (1470)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v 512 (1470)
.+++++++++|++.|+.+|+|++.|+|+|+|||+|||||||++|.++|++.|++|+++++|..|..+++.++++++|+++
T Consensus 359 ~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv 438 (1381)
T KOG0054|consen 359 SFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLV 438 (1381)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CCCCCCCCCCCCCCcc
Q 000475 513 SVITFGVCI-LLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDN-QKKPITEPTSKASDVA 590 (1470)
Q Consensus 513 ~~~~f~~~~-~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e-~~~~~~~~~~~~~~~~ 590 (1470)
+++||++|+ ..++.++++++|+++++||+|+.|+.++|..++.+.|++||++|+++||..+| +++...+.+.+..+.+
T Consensus 439 ~~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~ 518 (1381)
T KOG0054|consen 439 SVVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENA 518 (1381)
T ss_pred HHHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCce
Confidence 999999999 77889999999999999999999999999999999999999999999999998 4444443345556678
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCEeEEEcCCCC
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGKKAYVPQSSW 669 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~~ayv~Q~~~ 669 (1470)
|+++|++|+|+++ ++.++|+| ||++++|+++||||++||||||||++|+|||++.+|++ .++|.+|||||+||
T Consensus 519 i~i~~~sfsW~~~-----~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v-~v~gsiaYv~Q~pW 592 (1381)
T KOG0054|consen 519 IEIKNGSFSWDSE-----SPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSV-AVNGSVAYVPQQPW 592 (1381)
T ss_pred EEEeeeeEecCCC-----CCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceE-EEcCeEEEeccccH
Confidence 9999999999975 45669999 99999999999999999999999999999999999997 99999999999999
Q ss_pred CCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCC
Q 000475 670 IQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFS 749 (1470)
Q Consensus 670 i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~s 749 (1470)
|+||||||||+||.|||+++|++|+++|+|++|++.+|+||+|+|||||.||||||||||+||||+|+|+||||||||+|
T Consensus 593 I~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplS 672 (1381)
T KOG0054|consen 593 IQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLS 672 (1381)
T ss_pred hhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHHhhchhHHHHHHHHhhhcccCCC
Q 000475 750 AVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVN 829 (1470)
Q Consensus 750 aLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 829 (1470)
|||+|+++|||++|+++.+++||||+|||+++++++||+|++|+||+|.+.|+|+|+++ .+..+.++..+ .+.++.+
T Consensus 673 AVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~-~~~~~~~l~~~--~~~~~~~ 749 (1381)
T KOG0054|consen 673 AVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLK-SGGDFAELAHE--EESEQEE 749 (1381)
T ss_pred hhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHh-cchhHHHHhhc--cchhhcc
Confidence 99999999999999999999999999999999999999999999999999999999997 77777776322 1111111
Q ss_pred C-CCCCcc--cccCcc-----cccchhhhhccCCCCCCCCCCCCccchhhcCcchHHHHHHHHHHhchhhHHHHHHHHHH
Q 000475 830 P-PQEDKC--LSRVPC-----QMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYSAFITLVYKGALVPVILLCQV 901 (1470)
Q Consensus 830 ~-~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~l~~~ 901 (1470)
+ ..+... ....+. ......++ +....+.+..++.++|+++.|.|+|++|+.|+++.+|+..+++++++.+
T Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v 827 (1381)
T KOG0054|consen 750 EASEKDLESGESSRESESRSLESLSSEEE--KSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFV 827 (1381)
T ss_pred ccccccccccccccchhhhhhhhhccccc--ccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 0 000000 000000 00000000 0111122345677889999999999999999999888888888889999
Q ss_pred HHHHHHhhhhHHHHHhccccc--c---ccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 000475 902 LFQALQMGSNYWIAWATDEKR--K---VSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPIS 976 (1470)
Q Consensus 902 ~~~~~~~~~~~wl~~~~~~~~--~---~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ 976 (1470)
+.++++++++||+++|++... . .+...|+++|++++++++++.++|++.+...++++|++||++|+++++|+||+
T Consensus 828 ~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~ 907 (1381)
T KOG0054|consen 828 LTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMS 907 (1381)
T ss_pred HHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch
Confidence 999999999999999996432 1 35678999999999999999999999999999999999999999999999999
Q ss_pred cccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 000475 977 FFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQ 1056 (1470)
Q Consensus 977 ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~ 1056 (1470)
|||+||+|||+||||+|++.+|..+|..+..++..+++++++++++++++|+++++++|+.+++++++
T Consensus 908 FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~------------ 975 (1381)
T KOG0054|consen 908 FFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQ------------ 975 (1381)
T ss_pred hcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHH------------
Confidence 99999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Q 000475 1057 AYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFA 1136 (1470)
Q Consensus 1057 ~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~ 1136 (1470)
+||++++||++|+++.+|||+++||+||+.|+.|||||++|++|.+++..++|.+++++|+..+++||+++|+|++++++
T Consensus 976 ~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~ 1055 (1381)
T KOG0054|consen 976 RYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLV 1055 (1381)
T ss_pred HHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCC
Q 000475 1137 FFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPS 1216 (1470)
Q Consensus 1137 ~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~ 1216 (1470)
+++++++++..+.+..+||.+|++++|+++++..++|++|+.+++|++|+||||+.||+++|+|+|+..+..+||++||+
T Consensus 1056 v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~ 1135 (1381)
T KOG0054|consen 1056 VLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPS 1135 (1381)
T ss_pred HHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCC
Confidence 99999988877766578999999999999999999999999999999999999999999999998887777779999999
Q ss_pred CCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcc
Q 000475 1217 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSR 1296 (1470)
Q Consensus 1217 ~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~ 1296 (1470)
+|+|+|+|+++||+|+.|+|||||||+|+||||||||||||||||||+++|||+.||.+|+|.|||+||+++++||||++
T Consensus 1136 ~G~I~f~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsr 1215 (1381)
T KOG0054|consen 1136 KGEIEFEDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSR 1215 (1381)
T ss_pred CCeEEEEEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000475 1297 LSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1376 (1470)
Q Consensus 1297 isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1376 (1470)
+++|||||+||+||+|+||||+++|+|+|||+|||+|+|+++|+++|+|||++|.|+|+|||.||||++||||||||++|
T Consensus 1216 lsIIPQdPvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~sk 1295 (1381)
T KOG0054|consen 1216 LSIIPQDPVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSK 1295 (1381)
T ss_pred CeeeCCCCceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHH
Q 000475 1377 ILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEF 1456 (1470)
Q Consensus 1377 ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~ 1456 (1470)
|||||||||++|++||..||++||++|+|||||+||||++||+|||||+|||+|+|+|+|+|++|+++++|.|++++.++
T Consensus 1296 ILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~ 1375 (1381)
T KOG0054|consen 1296 ILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEA 1375 (1381)
T ss_pred EEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred Hhhcc
Q 000475 1457 LRRTS 1461 (1470)
Q Consensus 1457 ~~~~~ 1461 (1470)
+.++.
T Consensus 1376 ~~~~~ 1380 (1381)
T KOG0054|consen 1376 ALSSR 1380 (1381)
T ss_pred HHhhc
Confidence 86653
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.1e-209 Score=2122.44 Aligned_cols=1416 Identities=31% Similarity=0.506 Sum_probs=1173.6
Q ss_pred chhhcchhhhhHHHHHHHHHHHHHHHHHHhhcCCCcchhh--hhhhhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccc
Q 000475 7 LELVSADKVLESVNVAFFIGLFTRLWIEILKRRRDDGYIL--MARRAAGLVIVLCNVLIFILYMGFGFYEYWNFRIVSFK 84 (1470)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1470)
+...-.|.++.++..+++++++...+....+.....++.. ...+....+.++|+....+++...+..........+ +
T Consensus 29 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 107 (1622)
T PLN03130 29 YTPCATDSLVINISHLVLLGLCLYRIWLIKKDHKVQRFCLRSKWYNYFLALLAAYCTAEPLFRLVMGISVLNLDGQTS-L 107 (1622)
T ss_pred CCccHHhhHHHHHHHHHHHHHHHHHHHHhccccccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccc-c
Confidence 3344467677777777777666665554422111111101 122234555666666666666444333211111112 2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhc-----cccccchHHHHHHHHH---HHHHHHHHHHHHHHHHhhcCCCCccchhhHH
Q 000475 85 SVSLVVTWALATVVALCSRYYRTLG-----EHKRWPLVLVLWWVVH---LVIVLVCVSVYLLTHLSSIGLPHILPEAKAV 156 (1470)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1470)
...+...+..+++..+++.+.+.++ +..++++.+++||++. +++.+ . ........... ....+..+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~--~~~~~~~~ 181 (1622)
T PLN03130 108 PPFEIVSLIVEALTWCSMLVMIGVETKIYIREFRWYVRFAVIYVLVGDAVMLNL-V---LSVKEYYSSFV--LYLYISEV 181 (1622)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeehhHHHhhHHHHHHH-H---HHHHHHHhccc--cceehhHH
Confidence 3344443555666666522111122 1456799999999998 65544 2 11222222210 01122222
Q ss_pred HHHHHHHHHHhhcccccccccCCCCCCCCCCCC------ccccccccccCCCCcccCCHhHHHHHHhHHHHHHhhccCCC
Q 000475 157 DFVSLPLLVLLCFNATYACCCARDPSDLDIPLL------REEDDEFLCKNISTFASAGVLSKITFHWLNQLFQRGRIQKL 230 (1470)
Q Consensus 157 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~p~~~a~~~s~~~f~W~~~l~~~g~~~~L 230 (1470)
.+.+.+.+..+. .+.|..+. ..+.|.. .+.++.+.+.+++||++||+|||++|||+||++++||+++|
T Consensus 182 ~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L 255 (1622)
T PLN03130 182 AAQVLFGILLLV----YFPNLDPY--PGYTPIGSESVDDYEYEELPGGEQICPERHANIFSRIFFGWMTPLMQLGYKRPL 255 (1622)
T ss_pred HHHHHHHHHHHH----HHhcCCCC--cccccccccccccccccCCcccCCCCcccccCHHHHHHHHHHHHHHHHHhcCCC
Confidence 222221111100 01122221 0111100 01111233467899999999999999999999999999999
Q ss_pred CCCCCCCCCcCCcHHHHHHHHHHHHHhhcC-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 000475 231 ELLHIPPIPQSETANDASSLLEESLRKQKT-DATSLPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKH 309 (1470)
Q Consensus 231 ~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~-~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~ 309 (1470)
+.+|||+|+++|+++.++++|++.|+++.+ ++|+|+++++++||+.+++.++++++..++.+++|++++.+++++.+++
T Consensus 256 ~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~~ 335 (1622)
T PLN03130 256 TEKDVWKLDTWDQTETLYRSFQKCWDEELKKPKPWLLRALNNSLGGRFWLGGFFKIGNDLSQFVGPLLLNLLLESMQNGE 335 (1622)
T ss_pred ChhhccCCChhhhHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999998754 5689999999999999999999999999999999999999999997643
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC---CHHHHHHHHHHhHHHHH
Q 000475 310 DHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTVLIYKRSMAIKFAGP---SSGIIINMINVDVERIG 386 (1470)
Q Consensus 310 ~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~rir~~L~~~iy~K~L~ls~~~~---~~G~ivnlms~D~~~i~ 386 (1470)
. ... |++++++++++.++.+++.++|++...++++++|+.++..+|+|.++++.... ++|+++|+|++|++++.
T Consensus 336 ~--~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~ 412 (1622)
T PLN03130 336 P--AWI-GYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQ 412 (1622)
T ss_pred c--chH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHH
Confidence 2 333 77777777777777788888999999999999999999999999999987543 88999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 000475 387 DFFLYIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRV 466 (1470)
Q Consensus 387 ~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~ 466 (1470)
+++..+|.+|..|+++++++++||..+| +++++|++++++++|++..+++++++.++++++.+|+|++.++|+++|||+
T Consensus 413 ~~~~~l~~l~~~pl~ii~~~~lL~~~lg-~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~ 491 (1622)
T PLN03130 413 QICQQLHTLWSAPFRIIIAMVLLYQQLG-VASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDT 491 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 889999888999999999999999999999999999999999999999999
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 000475 467 LKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPI 546 (1470)
Q Consensus 467 IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl 546 (1470)
||+|+||+.|.+++++.|++|++..++..+..++..++....|.++++++|++|.+.++.+|++.+|++++++++++.|+
T Consensus 492 IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl 571 (1622)
T PLN03130 492 VKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPL 571 (1622)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888888788888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcE
Q 000475 547 YNLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSK 625 (1470)
Q Consensus 547 ~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~ 625 (1470)
..+|..+..+.++++|++||++|+..+|..+... .+.......|+++|++|+|+++ +..+.|+| ||++++|++
T Consensus 572 ~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~-~~~~~~~~~I~~~nvsf~y~~~-----~~~~vL~~inl~i~~Ge~ 645 (1622)
T PLN03130 572 FMLPNLITQAVNANVSLKRLEELLLAEERVLLPN-PPLEPGLPAISIKNGYFSWDSK-----AERPTLSNINLDVPVGSL 645 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCcccccccC-CcccCCCCceEEEeeEEEccCC-----CCCceeeceeEEecCCCE
Confidence 9999999999999999999999998766321111 1111123469999999999854 23578999 999999999
Q ss_pred EEEEcCCCCChHHHHHHHhCCCcCCC-CcEEEECCEeEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHH
Q 000475 626 VAVCGSVGSGKSSLLSSILGEIPRIS-GAAIKVHGKKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIE 704 (1470)
Q Consensus 626 ~~ivG~~GsGKSTLl~~llG~~~~~~-G~~i~~~g~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~ 704 (1470)
++|+||+|||||||+++|+|+++|.+ |++ .+++++|||+|+||+|++||||||+||+++++++|++++++|+|++|++
T Consensus 646 vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I-~l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~ 724 (1622)
T PLN03130 646 VAIVGSTGEGKTSLISAMLGELPPRSDASV-VIRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLD 724 (1622)
T ss_pred EEEECCCCCCHHHHHHHHHHhhccCCCceE-EEcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHH
Confidence 99999999999999999999999999 886 8999999999999999999999999999999999999999999999999
Q ss_pred hccCCCcccccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhh
Q 000475 705 MWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLD 784 (1470)
Q Consensus 705 ~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~ 784 (1470)
.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++++.+.+++||+|+|||+++.++
T Consensus 725 ~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~ 804 (1622)
T PLN03130 725 LLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLS 804 (1622)
T ss_pred hCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhhHHhhchhHHHHHHHHhhhcccCCCCCCCCc-c-cccCcccc--cchhhhhcc-CCCCCC
Q 000475 785 AADLVLVMKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDK-C-LSRVPCQM--SQITEERFA-RPISCG 859 (1470)
Q Consensus 785 ~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~--~~~~~~~~~-~~~~~~ 859 (1470)
.||+|++|++|+|+++|+++|+.+ .+..+.++...+....+..+...+.. . ....+... .....+... ......
T Consensus 805 ~aD~Ii~L~~G~i~e~Gt~~eL~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (1622)
T PLN03130 805 QVDRIILVHEGMIKEEGTYEELSN-NGPLFQKLMENAGKMEEYVEENGEEEDDQTSSKPVANGNANNLKKDSSSKKKSKE 883 (1622)
T ss_pred hCCEEEEEeCCEEEEeCCHHHHHh-cchhHHHHHHhcccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999987 55566666544321110000000000 0 00000000 000000000 000001
Q ss_pred CCCCCCccchhhcCcchHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccc--cccccchhhhHHHhh
Q 000475 860 EFSGRSQDEDTELGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKR--KVSREQLIGVFIFLS 937 (1470)
Q Consensus 860 ~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~--~~~~~~~l~vy~~l~ 937 (1470)
....+.++|+++.|.++|++|+.|+++.++.+++.+++++.++.+++.+++++|+++|++... ......|+++|++++
T Consensus 884 ~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~i~~~l~ 963 (1622)
T PLN03130 884 GKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTHGPLFYNLIYALLS 963 (1622)
T ss_pred cchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHHHHH
Confidence 112345678889999999999999999877666666667777888889999999999986322 122456788899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHH
Q 000475 938 GGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLS 1017 (1470)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~ 1017 (1470)
++..++.+++.+++...+.++++++|++++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+++
T Consensus 964 ~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~ 1043 (1622)
T PLN03130 964 FGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLS 1043 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchH
Q 000475 1018 IIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQE 1097 (1470)
Q Consensus 1018 ~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e 1097 (1470)
.++++++++|...++++|+.+++++++ ++|.+++|+++|.+..+++|+++|+.|+++|+.|||+|+++
T Consensus 1044 ~~i~i~~~~~~~~~~~~pl~~~~~~~~------------~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~ 1111 (1622)
T PLN03130 1044 TFVLIGIVSTISLWAIMPLLVLFYGAY------------LYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAY 1111 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHH
Confidence 999988888877777777766655555 78999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCC----CcCHHHHHHHHHHHHHHHHHHHH
Q 000475 1098 NRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRS----AIDPSLAGLAATYGLNLNVLQAW 1173 (1470)
Q Consensus 1098 ~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~----~~~~~~~gl~l~y~l~l~~~~~~ 1173 (1470)
++|.+++.+..|.+.+..+.....++|++.++++++++++.+.+.+.+..... ...++.+|++++|++.+...+.+
T Consensus 1112 ~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~ 1191 (1622)
T PLN03130 1112 DRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTA 1191 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998887666554443322111 11267899999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEE
Q 000475 1174 VIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVV 1253 (1470)
Q Consensus 1174 ~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIV 1253 (1470)
+++.+.++|+.++|+||+.+|.+.|+|++...++..+++.||.+|.|+|+||+|+|+++.++||+|+||+|+||||||||
T Consensus 1192 l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIV 1271 (1622)
T PLN03130 1192 VLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIV 1271 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEE
Confidence 99999999999999999999999998876544445567789999999999999999988788999999999999999999
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHc
Q 000475 1254 GRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKC 1333 (1470)
Q Consensus 1254 GrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~ 1333 (1470)
||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+|+|+||+++
T Consensus 1272 GrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~a 1351 (1622)
T PLN03130 1272 GRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLERA 1351 (1622)
T ss_pred CCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEec
Q 000475 1334 HLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAH 1413 (1470)
Q Consensus 1334 ~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAH 1413 (1470)
+++++|.++|+||||+|+|+|.|||||||||+||||||||+|+|||||||||+||.+||+.||++|++.+++||||+|||
T Consensus 1352 ~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAH 1431 (1622)
T PLN03130 1352 HLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAH 1431 (1622)
T ss_pred CcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHHhh
Q 000475 1414 RIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLRR 1459 (1470)
Q Consensus 1414 Rl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~~~ 1459 (1470)
|++|+++||||+|||+|+|+|+|+|++|+++++|.|++|+++....
T Consensus 1432 RL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~~ 1477 (1622)
T PLN03130 1432 RLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGAA 1477 (1622)
T ss_pred ChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcChh
Confidence 9999999999999999999999999999998789999999987753
No 3
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.5e-205 Score=2087.82 Aligned_cols=1415 Identities=30% Similarity=0.504 Sum_probs=1169.2
Q ss_pred hhhcchhhhhHHHHHHHHHHHHHHHHHHhhcCCCcchhh--hhhhhhhHHHHHHHHHHHHHHHHhhhhhhhhccc-cccc
Q 000475 8 ELVSADKVLESVNVAFFIGLFTRLWIEILKRRRDDGYIL--MARRAAGLVIVLCNVLIFILYMGFGFYEYWNFRI-VSFK 84 (1470)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 84 (1470)
...-.|.++..+..+++++++...+....+++....+.. ...+....+.++|+....+++...+.... ...+ .. +
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~ 107 (1495)
T PLN03232 30 TPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAKAQIYVLRKKYYNCVLGILACYCVVEPVLRLVMGISLF-DMDEETD-L 107 (1495)
T ss_pred CccHHhhHHHHHHHHHHHHHHHHHHHHHhhccccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccccccc-c
Confidence 344456666677777777666666555432222211101 12223455566666666665533332221 1111 12 2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhc-----cccccchHHHHHHHHH---HHHHHHHHHHHHHHHHhhcCCCCccchhhHH
Q 000475 85 SVSLVVTWALATVVALCSRYYRTLG-----EHKRWPLVLVLWWVVH---LVIVLVCVSVYLLTHLSSIGLPHILPEAKAV 156 (1470)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1470)
...+...+..+++..+++.+.+.++ +..++++++++||++. +++.+ . ........... ....+..+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~--~~~~~~~~ 181 (1495)
T PLN03232 108 PPFEVASLMVEAFAWFSMLVLIGLETKQYVKEFRWYVRFGVVYVLVADAVLLDL-V---LPLKNSINRTA--LYLCISSR 181 (1495)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeehhHhhhhHHHHHH-H---HHHHHHHhccc--cceehhHH
Confidence 3334443555666666622111122 1456799999999998 66554 2 11111112110 01122222
Q ss_pred HHHHHHHHHHhhcccccccccCCCCCCCC---CCCCc--cccccccccCCCCcccCCHhHHHHHHhHHHHHHhhccCCCC
Q 000475 157 DFVSLPLLVLLCFNATYACCCARDPSDLD---IPLLR--EEDDEFLCKNISTFASAGVLSKITFHWLNQLFQRGRIQKLE 231 (1470)
Q Consensus 157 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~p~~~a~~~s~~~f~W~~~l~~~g~~~~L~ 231 (1470)
.+.+.+.+..+. .+.|..+. +... .+..+ +.+..+.+.+++||++||+|||++|||++|++++||+++|+
T Consensus 182 ~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~f~w~~pl~~~g~~~~L~ 256 (1495)
T PLN03232 182 CCQALFGILLLV----YIPELDPY-PGYHILNNESLDNVEYDALRGGENICPERYASIFSRIYFSWMTPLMQLGYRKPIT 256 (1495)
T ss_pred HHHHHHHHHHHH----hcccCCCC-CcccccccccccccccccccccCCCCccccCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 222221111100 11122211 0000 00111 00112335678999999999999999999999999999999
Q ss_pred CCCCCCCCcCCcHHHHHHHHHHHHHhhcC-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 000475 232 LLHIPPIPQSETANDASSLLEESLRKQKT-DATSLPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHD 310 (1470)
Q Consensus 232 ~~dl~~l~~~~~~~~~~~~~~~~w~~~~~-~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~ 310 (1470)
.+|||+|+++|+++.++++|++.|+++.+ ++++++++++++||+.++..++++++.+++.+++|++++.+++++++++.
T Consensus 257 ~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~~ 336 (1495)
T PLN03232 257 EKDVWQLDQWDQTETLIKRFQRCWTEESRRPKPWLLRALNNSLGGRFWLGGIFKIGHDLSQFVGPVILSHLLQSMQEGDP 336 (1495)
T ss_pred hhhccCCChhhhHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999998754 46899999999999999999999999999999999999999999976432
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC---CHHHHHHHHHHhHHHHHH
Q 000475 311 HSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTVLIYKRSMAIKFAGP---SSGIIINMINVDVERIGD 387 (1470)
Q Consensus 311 ~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~rir~~L~~~iy~K~L~ls~~~~---~~G~ivnlms~D~~~i~~ 387 (1470)
... |+.++++++++.++.+++.++|++...++++++|+.++..+|+|.++++.... ++|+++|+|++|++++.+
T Consensus 337 --~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~ 413 (1495)
T PLN03232 337 --AWV-GYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQ 413 (1495)
T ss_pred --cch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 333 88888888889999999999999999999999999999999999999987543 799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 000475 388 FFLYIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVL 467 (1470)
Q Consensus 388 ~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~I 467 (1470)
+...+|.+|..|++++++++++|..+| ++++++++++++++|++..+++++++.++++++.+|+|.+.++|+++|||+|
T Consensus 414 ~~~~l~~l~~~p~~ii~~~~~l~~~lg-~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~I 492 (1495)
T PLN03232 414 IAEQLHGLWSAPFRIIVSMVLLYQQLG-VASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTV 492 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 8889998888899999999999999999999999999999999999999999
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000475 468 KLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIY 547 (1470)
Q Consensus 468 K~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~ 547 (1470)
|+|+||+.+.+++++.|++|.+..++..+..+...++....|.++++++|++|.+.++++|++.+|+++++++.+..|+.
T Consensus 493 K~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~ 572 (1495)
T PLN03232 493 KCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLN 572 (1495)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988888777777778888888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEE
Q 000475 548 NLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKV 626 (1470)
Q Consensus 548 ~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~ 626 (1470)
.+|..+..+.++++|++||++|++.+|+.+... .+.......|+++|++|+|+.+ +..+.|+| ||++++|+++
T Consensus 573 ~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~-~~~~~~~~~I~~~~vsF~y~~~-----~~~~vL~~inl~i~~Ge~v 646 (1495)
T PLN03232 573 MLPNLLSQVVNANVSLQRIEELLLSEERILAQN-PPLQPGAPAISIKNGYFSWDSK-----TSKPTLSDINLEIPVGSLV 646 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcccccccc-CCcCCCCCcEEEEeeEEEcCCC-----CCCceeeeeEEEEcCCCEE
Confidence 999999999999999999999998765321111 1111123469999999999854 23578999 9999999999
Q ss_pred EEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCEeEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhc
Q 000475 627 AVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGKKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMW 706 (1470)
Q Consensus 627 ~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l 706 (1470)
+|+||+|||||||+++|+|+++|.+|++..+++.+|||+|+||+|++||||||+||+++++++|++++++|+|++|++.+
T Consensus 647 aIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~L 726 (1495)
T PLN03232 647 AIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLL 726 (1495)
T ss_pred EEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhC
Confidence 99999999999999999999999999877889999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhc
Q 000475 707 ADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAA 786 (1470)
Q Consensus 707 ~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~ 786 (1470)
|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++++.+.++++|+|+|||+++.++.|
T Consensus 727 p~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~a 806 (1495)
T PLN03232 727 PGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLM 806 (1495)
T ss_pred CCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhC
Confidence 99999999999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred CEEEEEeCCEEEEecChhhHHhhchhHHHHHHHHhhhcccCCCCCC-CCcccccCcccccchhhhhccCCC-CCCCCCCC
Q 000475 787 DLVLVMKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQ-EDKCLSRVPCQMSQITEERFARPI-SCGEFSGR 864 (1470)
Q Consensus 787 d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 864 (1470)
|+|++|++|+|+++|+++|+.+ .+..+.++...+....+..+..+ .+......+.......++...... .+.....+
T Consensus 807 D~Ii~L~~G~i~~~Gt~~eL~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (1495)
T PLN03232 807 DRIILVSEGMIKEEGTFAELSK-SGSLFKKLMENAGKMDATQEVNTNDENILKLGPTVTIDVSERNLGSTKQGKRGRSVL 885 (1495)
T ss_pred CEEEEEeCCEEEEecCHHHHHh-cchhHHHHHHhcccccccccccccccccccccccccccccccccccccccccchhhh
Confidence 9999999999999999999987 55566665543321111000000 000000000000000000000000 00111235
Q ss_pred CccchhhcCcchHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccc--cccccchhhhHHHhhhHHHH
Q 000475 865 SQDEDTELGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKR--KVSREQLIGVFIFLSGGSSF 942 (1470)
Q Consensus 865 ~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~--~~~~~~~l~vy~~l~~~~~~ 942 (1470)
.++|+++.|.++|++|+.|+++.++++.+.+++++.++.+++.+++++|+++|++... ......|+++|++++++..+
T Consensus 886 ~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~l~~y~~l~~~~~~ 965 (1495)
T PLN03232 886 VKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTPKSYSPGFYIVVYALLGFGQVA 965 (1495)
T ss_pred hhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHH
Confidence 6778899999999999999999877666666666777788888999999999985321 22346789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHH
Q 000475 943 FILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILM 1022 (1470)
Q Consensus 943 ~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~ 1022 (1470)
+.+++.+++...+.++++++|++++++++++|++|||++|+|+++||+++|++.+|..++..+..++..++.+++.++++
T Consensus 966 ~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~ 1045 (1495)
T PLN03232 966 VTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALI 1045 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHH
Q 000475 1023 SQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLL 1102 (1470)
Q Consensus 1023 ~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~ 1102 (1470)
+.+++...++++|+.+++++.+ .+|.+++|+++|.+..+++|+++|++|+++|+.|||+|+++++|.+
T Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~ 1113 (1495)
T PLN03232 1046 GTVSTISLWAIMPLLILFYAAY------------LYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAK 1113 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHH
Confidence 8777766666666666555555 7889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-----CHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 1103 RSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAI-----DPSLAGLAATYGLNLNVLQAWVIWN 1177 (1470)
Q Consensus 1103 ~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~gl~l~y~l~l~~~~~~~i~~ 1177 (1470)
++.+..|.+.+..+.....++|+..++++++++++.+.+.+.+.. .+.. .++.+|++++|+..+...+.++++.
T Consensus 1114 ~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~ 1192 (1495)
T PLN03232 1114 INGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLR-NGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQ 1192 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999899999999999988766555444433322 2221 2567888999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCC
Q 000475 1178 LCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTG 1257 (1470)
Q Consensus 1178 ~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTG 1257 (1470)
+.++|+.++|+||+.+|.+.|+|++...+...+++.||..|.|+|+||+|+|+++.++||+|+||+|+||||||||||||
T Consensus 1193 ~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SG 1272 (1495)
T PLN03232 1193 ASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTG 1272 (1495)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCC
Confidence 99999999999999999999888654333344667899999999999999998887889999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHH
Q 000475 1258 SGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAE 1337 (1470)
Q Consensus 1258 SGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~ 1337 (1470)
||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+|+|+||+++++++
T Consensus 1273 SGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~~a~l~~ 1352 (1495)
T PLN03232 1273 AGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKD 1352 (1495)
T ss_pred CCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhh
Q 000475 1338 IVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPT 1417 (1470)
Q Consensus 1338 ~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~t 1417 (1470)
+|+++|+||||+|+|+|.|||||||||+||||||||+|+|||||||||+||++||+.||++|++.+++||||+||||++|
T Consensus 1353 ~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~t 1432 (1495)
T PLN03232 1353 VIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNT 1432 (1495)
T ss_pred HHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHHhh
Q 000475 1418 VIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLRR 1459 (1470)
Q Consensus 1418 i~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~~~ 1459 (1470)
+++||||+|||+|+|+|+|+|+||+++++|.|++|+++....
T Consensus 1433 i~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1433 IIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPA 1474 (1495)
T ss_pred HHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChh
Confidence 999999999999999999999999998888999999987654
No 4
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.1e-202 Score=2056.50 Aligned_cols=1232 Identities=33% Similarity=0.591 Sum_probs=1092.7
Q ss_pred cCCCCcccCCHhHHHHHHhHHHHHHhhccCCCCCCCCCCCCcCCcHHHHHHHHHHHHHhhcC------------------
Q 000475 199 KNISTFASAGVLSKITFHWLNQLFQRGRIQKLELLHIPPIPQSETANDASSLLEESLRKQKT------------------ 260 (1470)
Q Consensus 199 ~~~~p~~~a~~~s~~~f~W~~~l~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~------------------ 260 (1470)
.+.+||++||++||++|||+||++++||+++|+.+|||+++++|+++.++++|++.|+++.+
T Consensus 199 ~~~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 278 (1522)
T TIGR00957 199 PNPCPESSASFLSRITFWWITGMAVYGYRQPLEESDLWSLNKEDTSEMVVPVLVENWKKECKKTRKQPVSAVYGKKDPSK 278 (1522)
T ss_pred CCCCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhccCCCHhHhHHHHHHHHHHHHHHHHhhccccccccccccccccc
Confidence 45789999999999999999999999999999999999999999999999999999986510
Q ss_pred ------------------------CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHH
Q 000475 261 ------------------------DATSLPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHY 316 (1470)
Q Consensus 261 ------------------------~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~ 316 (1470)
++++|+++++++||+.++..++++++.+++.+++|++++.+++|+.++.. ....
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~-~~~~- 356 (1522)
T TIGR00957 279 PKGSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFGPYFLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMA-PDWQ- 356 (1522)
T ss_pred ccccccccccccccccccccccccCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-ccch-
Confidence 23689999999999999999999999999999999999999999976543 2233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC---CHHHHHHHHHHhHHHHHHHHHHHH
Q 000475 317 GLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTVLIYKRSMAIKFAGP---SSGIIINMINVDVERIGDFFLYIH 393 (1470)
Q Consensus 317 g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~rir~~L~~~iy~K~L~ls~~~~---~~G~ivnlms~D~~~i~~~~~~~~ 393 (1470)
||+++++++++.++.+++.++|+|...++|+++|++|+..||+|+|+++.... ++|+++|+|++|++++.++..++|
T Consensus 357 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~ 436 (1522)
T TIGR00957 357 GYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYIN 436 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhcCCCCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999987654 889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccH
Q 000475 394 RIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWE 473 (1470)
Q Consensus 394 ~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE 473 (1470)
.+|..|++++++++++|..+| ++++++++++++++|++..++++.+++++++|+.+|+|++.++|+++|||+||+|+||
T Consensus 437 ~~~~~~~~i~~~~~ll~~~~g-~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e 515 (1522)
T TIGR00957 437 MIWSAPLQVILALYFLWLNLG-PSVLAGVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWE 515 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 474 QEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWASPTLVSVITFGVCILL--KTPLTSGAVLSALATFRILQEPIYNLPE 551 (1470)
Q Consensus 474 ~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~--~~~L~~~~vft~l~~~~~l~~pl~~lp~ 551 (1470)
+.|.+++++.|++|++..++..+......+.++..|.++.+++|++|.+. ++.|+++.+|++++++++++.|+..+|.
T Consensus 516 ~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~ 595 (1522)
T TIGR00957 516 LAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPM 595 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988888877777888999999999998876 4679999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCC-CCCCCCCCC-CCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEE
Q 000475 552 LISMIAQTKVSLYRIQEFIKEDNQ-KKPITEPTS-KASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAV 628 (1470)
Q Consensus 552 ~i~~~~~a~vs~~Ri~~fL~~~e~-~~~~~~~~~-~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~i 628 (1470)
.+..+.++++|++||++|++.++. ++....... ......|+++|++|+|+.+ ..+.|+| ||++++|++++|
T Consensus 596 ~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------~~~~l~~isl~i~~G~~v~I 669 (1522)
T TIGR00957 596 VISSIVQASVSLKRLRIFLSHEELEPDSIERRTIKPGEGNSITVHNATFTWARD------LPPTLNGITFSIPEGALVAV 669 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcccccccccccccCCCCCCcEEEEEeEEEcCCC------CCceeeeeEEEEcCCCEEEE
Confidence 999999999999999999987652 211111111 1112369999999999753 3468999 999999999999
Q ss_pred EcCCCCChHHHHHHHhCCCcCCCCcEEEECCEeEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccC
Q 000475 629 CGSVGSGKSSLLSSILGEIPRISGAAIKVHGKKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWAD 708 (1470)
Q Consensus 629 vG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~ 708 (1470)
+||||||||||+++|+|+++|++|++ .++|++|||+|+||++++||+|||.||.++++++|++++++|++.+|++.+|+
T Consensus 670 vG~~GsGKSTLl~~l~g~~~~~~G~i-~~~g~i~yv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~ 748 (1522)
T TIGR00957 670 VGQVGCGKSSLLSALLAEMDKVEGHV-HMKGSVAYVPQQAWIQNDSLRENILFGKALNEKYYQQVLEACALLPDLEILPS 748 (1522)
T ss_pred ECCCCCCHHHHHHHHhCCCccCCcEE-EECCEEEEEcCCccccCCcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCC
Confidence 99999999999999999999999997 89999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHH--HhhcCCcEEEEEcCCcchhhhc
Q 000475 709 GDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCL--MGLLSQKTVLYTTHQLEFLDAA 786 (1470)
Q Consensus 709 g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~--~~~~~~~tvilvtH~~~~l~~~ 786 (1470)
||+|.+|++|.+|||||||||+||||+|++||+|||||||||||+++++++++.++ .+.++++|+|+|||++++++.|
T Consensus 749 g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~ 828 (1522)
T TIGR00957 749 GDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQV 828 (1522)
T ss_pred CCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhC
Confidence 99999999999999999999999999999999999999999999999999999887 3566789999999999999999
Q ss_pred CEEEEEeCCEEEEecChhhHHhhchhHHHHHHHHhhhcccCC--CCC------CCCccc---c---------cCcccc--
Q 000475 787 DLVLVMKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQV--NPP------QEDKCL---S---------RVPCQM-- 844 (1470)
Q Consensus 787 d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~---~---------~~~~~~-- 844 (1470)
|+|++|++|++++.|+++++.+ ++..+.++...+....+.. +.. .+.... . ..+...
T Consensus 829 D~ii~l~~G~i~~~g~~~~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1522)
T TIGR00957 829 DVIIVMSGGKISEMGSYQELLQ-RDGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQL 907 (1522)
T ss_pred CEEEEecCCeEEeeCCHHHHHh-cchhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhc
Confidence 9999999999999999999987 4555655554322110000 000 000000 0 000000
Q ss_pred ---cc-hhh-hhc-------cCCCCCCCCCCCCccchhhcCcchHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhH
Q 000475 845 ---SQ-ITE-ERF-------ARPISCGEFSGRSQDEDTELGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNY 912 (1470)
Q Consensus 845 ---~~-~~~-~~~-------~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 912 (1470)
.. ... .+. ..........+..++|+++.|+++|++|+.|+++.+ +..+++++++.++.+++..++++
T Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 986 (1522)
T TIGR00957 908 SASSSDSGDQSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWDYMKAIG-LFITFLSIFLFVCNHVSALASNY 986 (1522)
T ss_pred cccccccccccccccccccccccccccchhhhHHHHHHhcCcccHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 000 000000011234566778899999999999999875 44444555566777888899999
Q ss_pred HHHHhccccc----cccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHH
Q 000475 913 WIAWATDEKR----KVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILN 988 (1470)
Q Consensus 913 wl~~~~~~~~----~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~iln 988 (1470)
|+++|.+... ..+...++++|++++++..++.+++.++....+.++++++|++++++++++|++|||++|+|+|+|
T Consensus 987 ~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~iln 1066 (1522)
T TIGR00957 987 WLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVN 1066 (1522)
T ss_pred HHHHHhccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHH
Confidence 9999986321 122446778999999999888888989999999999999999999999999999999999999999
Q ss_pred HHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q 000475 989 RCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELAR 1068 (1470)
Q Consensus 989 R~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~r 1068 (1470)
||++|++.+|..++..+..++..++.+++.++++++.+|+++++++|+++++++++ ++|.+++|+++|
T Consensus 1067 R~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~r~~~~ 1134 (1522)
T TIGR00957 1067 RFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQ------------RFYVASSRQLKR 1134 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888887777777776666666 899999999999
Q ss_pred HHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000475 1069 MVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLP 1148 (1470)
Q Consensus 1069 l~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~ 1148 (1470)
++..+++|+++|+.|+++|+.|||+|+++++|.+++.+..|.++++.+.....++|+..++++++++++.+++.+.+ ..
T Consensus 1135 ~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~ 1213 (1522)
T TIGR00957 1135 LESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVGNCIVLFAALFAV-IS 1213 (1522)
T ss_pred HHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh
Confidence 99999999999999999999999999999999999999999999999999999999999999988765554444333 33
Q ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEE
Q 000475 1149 RSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQ 1228 (1470)
Q Consensus 1149 ~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~ 1228 (1470)
.+.+++|.+|++++|++.+...+.++++.++++|+.++|+||+.+|.+.|+|.+...+...++++||..|.|+|+||+|+
T Consensus 1214 ~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~ 1293 (1522)
T TIGR00957 1214 RHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLR 1293 (1522)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEE
Confidence 56789999999999999999999999999999999999999999999988876533334456678999999999999999
Q ss_pred eCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCc
Q 000475 1229 YNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQ 1308 (1470)
Q Consensus 1229 Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~ 1308 (1470)
|+++.++||+||||+|+||||||||||||||||||+++|+|+++|++|+|.|||+||+++++++||++|++|||||+||+
T Consensus 1294 Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~ 1373 (1522)
T TIGR00957 1294 YREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFS 1373 (1522)
T ss_pred eCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccC
Confidence 98877789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCC
Q 000475 1309 GTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASID 1388 (1470)
Q Consensus 1309 gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD 1388 (1470)
||||+||||+++++|+|||+||++|+++++|.++|+||||+|+|+|.|||||||||+||||||||+|+|||||||||+||
T Consensus 1374 gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD 1453 (1522)
T TIGR00957 1374 GSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVD 1453 (1522)
T ss_pred ccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHH
Q 000475 1389 TATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEF 1456 (1470)
Q Consensus 1389 ~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~ 1456 (1470)
.+||+.||++|++.+++||||+||||++|+++||||+|||+|+|+|+|+|++|+++ +|.|++|+++.
T Consensus 1454 ~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1454 LETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDA 1520 (1522)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999986 69999999874
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=8.3e-197 Score=1997.50 Aligned_cols=1235 Identities=27% Similarity=0.464 Sum_probs=1077.7
Q ss_pred CCCcccCCHhHHHHHHhHHHHHHhhccCCCCCCCCCCCCcCCcHHHHHHHHHHHHHhhc---CCCCChHHHHHHHHHHHH
Q 000475 201 ISTFASAGVLSKITFHWLNQLFQRGRIQKLELLHIPPIPQSETANDASSLLEESLRKQK---TDATSLPQVIIHAVWKSL 277 (1470)
Q Consensus 201 ~~p~~~a~~~s~~~f~W~~~l~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~---~~~~~l~~~l~~~~~~~~ 277 (1470)
.+||++||+|||++|||+||++++||+++|+.+|||+|+++|+++.++++|++.|+++. .++++|+++++++||+.+
T Consensus 3 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~L~~~l~~~~~~~~ 82 (1490)
T TIGR01271 3 RSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELASAKKNPKLLNALRRCFFWRF 82 (1490)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999998753 245899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 278 ALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTVLI 357 (1470)
Q Consensus 278 ~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~rir~~L~~~i 357 (1470)
++.++++++.+++.+++|++++.+++|++.... .....||+++++++++.++++++.++++|...++|+++|++|+.+|
T Consensus 83 ~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~i 161 (1490)
T TIGR01271 83 VFYGILLYFGEATKAVQPLLLGRIIASYDPFNA-PEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLI 161 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999964332 2222389999999999999999999999999999999999999999
Q ss_pred HHHhcccccCCC---CHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 000475 358 YKRSMAIKFAGP---SSGIIINMINVDVERIGDFFLYIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSNTP 434 (1470)
Q Consensus 358 y~K~L~ls~~~~---~~G~ivnlms~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i~~~~~~~ 434 (1470)
|+|.|+++..+. ++|+++|+|++|++++.+++.++|.+|..|+++++++++||..+| +++++|+++++++++++.+
T Consensus 162 y~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G-~~~l~~l~v~~~~~~~~~~ 240 (1490)
T TIGR01271 162 YKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLE-VNGFCGLGFLILLALFQAC 240 (1490)
T ss_pred HHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 999999976543 789999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 435 LANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWASPTLVSV 514 (1470)
Q Consensus 435 ~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~ 514 (1470)
+++++.++++++|+.+|+|++.++|+|+|||+||+|+||+.|.+++++.|++|++.+++..+......++++..|.++++
T Consensus 241 ~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1490)
T TIGR01271 241 LGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVF 320 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888888888889999999
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccEEE
Q 000475 515 ITFGVCILLKTPLTSGAVLSALATFRILQEPIY-NLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEPTSKASDVAIDI 593 (1470)
Q Consensus 515 ~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~-~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~~~~~i~~ 593 (1470)
++|++|.+.++ ++++.+||++++|++++.|+. .+|..+..+.++++|++||++||..+|.++... ......+++
T Consensus 321 ~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~----~~~~~~i~~ 395 (1490)
T TIGR01271 321 LSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEY----NLTTTEVEM 395 (1490)
T ss_pred HHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc----cCCCCceEE
Confidence 99999987754 789999999999999999985 799999999999999999999998876322111 112235999
Q ss_pred eeeEEEeCCCc--------cc------cC------------CCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCC
Q 000475 594 EAGEYAWDARE--------EN------FK------------KPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGE 646 (1470)
Q Consensus 594 ~~~~f~w~~~~--------~~------~~------------~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~ 646 (1470)
+|++|+|+... .. .. ...+.|+| ||++++|++++|+||||||||||+++|+|+
T Consensus 396 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~ 475 (1490)
T TIGR01271 396 VNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGE 475 (1490)
T ss_pred ecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 99999996420 00 00 01357899 999999999999999999999999999999
Q ss_pred CcCCCCcEEEECCEeEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHH
Q 000475 647 IPRISGAAIKVHGKKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1470)
Q Consensus 647 ~~~~~G~~i~~~g~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 726 (1470)
++|++|++ .++|.+|||+|+||++++||+|||+||.++++++|++++++|+|.+|++.+|+||.|.+|++|.+||||||
T Consensus 476 ~~~~~G~i-~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqk 554 (1490)
T TIGR01271 476 LEPSEGKI-KHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQR 554 (1490)
T ss_pred CCCCCceE-EECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHH
Confidence 99999997 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhH
Q 000475 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDL 806 (1470)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l 806 (1470)
|||+||||+|++|++|||||||||||+++++++++.|+.+.++++|+|+|||+++.++.||+|++|++|++.+.|+++++
T Consensus 555 qRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l 634 (1490)
T TIGR01271 555 ARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSEL 634 (1490)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999999999999999888877789999999999999999999999999999999999999
Q ss_pred HhhchhHHHHHHHHhh---h----c-------------cc--C-------C------CCCCC--Cc--------------
Q 000475 807 IADQNSELVRQMKAHR---K----S-------------LD--Q-------V------NPPQE--DK-------------- 835 (1470)
Q Consensus 807 ~~~~~~~~~~~~~~~~---~----~-------------~~--~-------~------~~~~~--~~-------------- 835 (1470)
.+ .+..+........ + . .+ . . .+..+ ..
T Consensus 635 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (1490)
T TIGR01271 635 QA-KRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASAR 713 (1490)
T ss_pred Hh-cChHHHHHHhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 76 3334433332100 0 0 00 0 0 00000 00
Q ss_pred ---------------c-c--ccCcc-------------------ccc---------chh--------h------hh----
Q 000475 836 ---------------C-L--SRVPC-------------------QMS---------QIT--------E------ER---- 851 (1470)
Q Consensus 836 ---------------~-~--~~~~~-------------------~~~---------~~~--------~------~~---- 851 (1470)
. . ...+. ... +.. . ++
T Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1490)
T TIGR01271 714 KFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQ 793 (1490)
T ss_pred ccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccc
Confidence 0 0 00000 000 000 0 00
Q ss_pred --ccC-------------------C-CCC------------CCCCCCCccchhhcCcchHHHHHHHHHHhchhhHHHHHH
Q 000475 852 --FAR-------------------P-ISC------------GEFSGRSQDEDTELGRVKWTVYSAFITLVYKGALVPVIL 897 (1470)
Q Consensus 852 --~~~-------------------~-~~~------------~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~ 897 (1470)
..+ . ... .......++|+++.|.++|++|+.|+++.+++.++.+++
T Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~~~~~~~~~ 873 (1490)
T TIGR01271 794 TSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNRNLVFVLIFC 873 (1490)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCcHHHHHHHH
Confidence 000 0 000 000113445777889999999999999886656655666
Q ss_pred HHHHHHHHHHhhhhHHHHHhcccc--------ccc-------------cccch-hhhHHHhhhHHHHHHHHHHHHHHHHH
Q 000475 898 LCQVLFQALQMGSNYWIAWATDEK--------RKV-------------SREQL-IGVFIFLSGGSSFFILGRAVLLATIA 955 (1470)
Q Consensus 898 l~~~~~~~~~~~~~~wl~~~~~~~--------~~~-------------~~~~~-l~vy~~l~~~~~~~~~~~~~~~~~~~ 955 (1470)
++.++.+++..++++|+++|.... +.. ...+| +++|++++++..++.+++.+++...+
T Consensus 874 ~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (1490)
T TIGR01271 874 LVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTL 953 (1490)
T ss_pred HHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667788899999999998775311 000 11122 45555555556677788999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000475 956 IKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLV 1035 (1470)
Q Consensus 956 ~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip 1035 (1470)
.++++++|.+++++++++|++||+++|+|+|+|||++|++.+|..+|..+..++..++.+++.++++++.+|+++++++|
T Consensus 954 ~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~~~ 1033 (1490)
T TIGR01271 954 LTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAAIP 1033 (1490)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988877778
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 000475 1036 ILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVT 1115 (1470)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~ 1115 (1470)
+++++++++ ++|.+++|+++|++..+++|+++|+.|++.|+.|||+|+++++|.+++.+..|.+++.+
T Consensus 1034 l~~~~~~~~------------~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~ 1101 (1490)
T TIGR01271 1034 VAVIFIMLR------------AYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANW 1101 (1490)
T ss_pred HHHHHHHHH------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHH
Confidence 777666666 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHh
Q 000475 1116 FHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFT 1195 (1470)
Q Consensus 1116 ~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~ 1195 (1470)
+.....++|+..++++++.+.+..++++.+. ....++|.+|++++|++.+...+.++++.++++|+.+.|+||+.+|.
T Consensus 1102 ~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~--~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~ 1179 (1490)
T TIGR01271 1102 FLYLSTLRWFQMRIDIIFVFFFIAVTFIAIG--TNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFI 1179 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999876654443333222 22356788999999999999999999999999999999999999999
Q ss_pred cCCCCCccccC--------------CCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHH
Q 000475 1196 NIPSEAPLVIK--------------NSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKS 1261 (1470)
Q Consensus 1196 ~~~~E~~~~~~--------------~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKS 1261 (1470)
+.|+|.+...+ ...+|+.||..|.|+|+||+++|+++.++||+|+||+|+||||||||||||||||
T Consensus 1180 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKS 1259 (1490)
T TIGR01271 1180 DLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKS 1259 (1490)
T ss_pred cCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHH
Confidence 98877542111 1234567999999999999999998778999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHh
Q 000475 1262 TLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQ 1341 (1470)
Q Consensus 1262 TLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~ 1341 (1470)
||+++|+|+++ ++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+++|+||++|+|+++|.+
T Consensus 1260 TLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~ 1338 (1490)
T TIGR01271 1260 TLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQ 1338 (1490)
T ss_pred HHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHh
Confidence 99999999998 79999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhc
Q 000475 1342 DQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDN 1421 (1470)
Q Consensus 1342 lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~ 1421 (1470)
+|+||||+|+|+|.||||||||||||||||||+|+|||||||||+||.+||+.||++|++.+++||||+||||++++.+|
T Consensus 1339 lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~ 1418 (1490)
T TIGR01271 1339 FPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLEC 1418 (1490)
T ss_pred CccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHHhhc
Q 000475 1422 DLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLRRT 1460 (1470)
Q Consensus 1422 DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~~~~ 1460 (1470)
|||+||++|+|+|+|+|++|++ ++|.|++|+++.....
T Consensus 1419 DrIlvL~~G~ivE~g~p~~Ll~-~~~~f~~l~~~~~~~~ 1456 (1490)
T TIGR01271 1419 QQFLVIEGSSVKQYDSIQKLLN-ETSLFKQAMSAADRLK 1456 (1490)
T ss_pred CEEEEEECCEEEEeCCHHHHHc-CCcHHHHHHHHhChhc
Confidence 9999999999999999999997 5899999999887543
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.4e-187 Score=1901.96 Aligned_cols=1243 Identities=29% Similarity=0.483 Sum_probs=1073.6
Q ss_pred cCCCCcccCCHhHHHHHHhHHHHHHhhccCCCCCCCCCCCCcCCcHHHHHHHHHHHHHhhcC------------------
Q 000475 199 KNISTFASAGVLSKITFHWLNQLFQRGRIQKLELLHIPPIPQSETANDASSLLEESLRKQKT------------------ 260 (1470)
Q Consensus 199 ~~~~p~~~a~~~s~~~f~W~~~l~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~------------------ 260 (1470)
..+.||++||||.++++.|++|++.+..|..|+.+|+|+...+.++-++..++.+..+++..
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (1560)
T PTZ00243 57 YTPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLD 136 (1560)
T ss_pred CCCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeecc
Confidence 34579999999999999999999999999999999999999999886665555443221100
Q ss_pred ---------------------------------C----------------------------------------------
Q 000475 261 ---------------------------------D---------------------------------------------- 261 (1470)
Q Consensus 261 ---------------------------------~---------------------------------------------- 261 (1470)
+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (1560)
T PTZ00243 137 ASSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSS 216 (1560)
T ss_pred ccccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeecc
Confidence 0
Q ss_pred --------------CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHH
Q 000475 262 --------------ATSLPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFA 327 (1470)
Q Consensus 262 --------------~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~ 327 (1470)
..+|+|+++++||+.+++.++++++.+++.+++|++++.+++|++++.. .+..|++++++++++
T Consensus 217 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~--~~~~g~~l~~~l~~~ 294 (1560)
T PTZ00243 217 TGSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNA--TWGRGLGLVLTLFLT 294 (1560)
T ss_pred cccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--chhHHHHHHHHHHHH
Confidence 0379999999999999999999999999999999999999999976543 343488899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCC-----CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000475 328 KTVESLTQRQWYFGANRIGIRVRSALTVLIYKRSMAIKFAG-----PSSGIIINMINVDVERIGDFFLYIHRIWLLPVQV 402 (1470)
Q Consensus 328 ~~~~~l~~~~~~~~~~r~g~rir~~L~~~iy~K~L~ls~~~-----~~~G~ivnlms~D~~~i~~~~~~~~~~w~~pl~i 402 (1470)
.++++++.++|+|...+.|+++|++|.+.+|+|+++++..+ .++|+++|+|++|++++.+++.++|.+|..|+++
T Consensus 295 ~~~~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~l 374 (1560)
T PTZ00243 295 QLIQSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVL 374 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987643 2789999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHH
Q 000475 403 FLALVILYKNLGAAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLR 482 (1470)
Q Consensus 403 ~~~~~lL~~~lG~~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~ 482 (1470)
++++++||..+| +++++|++++++++|++.++++++.++++++|+.+|+|++.++|+++|||+||+||||+.|.++|++
T Consensus 375 i~~~~lL~~~lG-~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~ 453 (1560)
T PTZ00243 375 LLSILLLSRLVG-WCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIED 453 (1560)
T ss_pred HHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 483 LREIERDSLKKYLYTCSAIAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVS 562 (1470)
Q Consensus 483 ~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs 562 (1470)
.|++|++.+++..+..++..++.+++|.++.+++|++|++.+++||++.+|+++++|++++.|+.++|..++.+.++++|
T Consensus 454 ~R~~El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS 533 (1560)
T PTZ00243 454 KRARELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVS 533 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCC-CCCC----CC-----CCC------------------------------------------------
Q 000475 563 LYRIQEFIKEDNQ-KKPI----TE-----PTS------------------------------------------------ 584 (1470)
Q Consensus 563 ~~Ri~~fL~~~e~-~~~~----~~-----~~~------------------------------------------------ 584 (1470)
++||++||..+|. .+.. +. ...
T Consensus 534 ~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (1560)
T PTZ00243 534 IKRISTFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPT 613 (1560)
T ss_pred HHHHHHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhccccccccc
Confidence 9999999987651 1000 00 000
Q ss_pred -CCCCccEEEeeeEEEeCCCcc-------------------------------cc-CCCcccccC-ceEeeCCcEEEEEc
Q 000475 585 -KASDVAIDIEAGEYAWDAREE-------------------------------NF-KKPTIKLTD-KMKIMKGSKVAVCG 630 (1470)
Q Consensus 585 -~~~~~~i~~~~~~f~w~~~~~-------------------------------~~-~~~~~~L~~-nl~i~~G~~~~ivG 630 (1470)
......+.++|++|+|+.... .+ ....+.|++ ||++++|++++|+|
T Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG 693 (1560)
T PTZ00243 614 KRHPSPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLG 693 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEEC
Confidence 000123566677776642110 00 012457889 99999999999999
Q ss_pred CCCCChHHHHHHHhCCCcCCCCcEEEECCEeEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCC
Q 000475 631 SVGSGKSSLLSSILGEIPRISGAAIKVHGKKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGD 710 (1470)
Q Consensus 631 ~~GsGKSTLl~~llG~~~~~~G~~i~~~g~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~ 710 (1470)
|||||||||+++|+|+++|++|++ .+++.+|||+|+||++++||+|||.|+.++++++|++++++|++++|++.+|+|+
T Consensus 694 ~nGsGKSTLL~~i~G~~~~~~G~i-~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~ 772 (1560)
T PTZ00243 694 ATGSGKSTLLQSLLSQFEISEGRV-WAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGL 772 (1560)
T ss_pred CCCCcHHHHHHHHhcCCCCCCcEE-EECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccc
Confidence 999999999999999999999997 7889999999999999999999999999888889999999999999999999999
Q ss_pred cccccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEE
Q 000475 711 LSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVL 790 (1470)
Q Consensus 711 ~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~ 790 (1470)
+|.+|++|.+|||||||||+||||+|++|++||||||||+||++++++++++++.+.++++|+|+|||+++.++.||+|+
T Consensus 773 ~t~i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii 852 (1560)
T PTZ00243 773 ETEIGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVV 852 (1560)
T ss_pred hHHhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999999999988877778999999999999999999999
Q ss_pred EEeCCEEEEecChhhHHhhchhHHHHHHHHhhhccc--CCCCCCCCcccccCc---ccccc--hhhhhc--cC--CCCCC
Q 000475 791 VMKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLD--QVNPPQEDKCLSRVP---CQMSQ--ITEERF--AR--PISCG 859 (1470)
Q Consensus 791 ~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~--~~~~~~--~~--~~~~~ 859 (1470)
+|++|++.+.|+++++.+ .. .+..+........+ ......+.......+ ..... ..+... .. .....
T Consensus 853 ~l~~G~i~~~G~~~~l~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1560)
T PTZ00243 853 ALGDGRVEFSGSSADFMR-TS-LYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDA 930 (1560)
T ss_pred EEECCEEEEecCHHHHHh-Ch-HHHHHHHhhccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999986 32 34333322111100 000000000000000 00000 000000 00 00011
Q ss_pred CCCCCCccchhhcCcchHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhH
Q 000475 860 EFSGRSQDEDTELGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGG 939 (1470)
Q Consensus 860 ~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~ 939 (1470)
...++.++|+++.|.++|++|+.|+++.++..++.+++++.++.+++..++++|+++|++.....+...|+++|+++.++
T Consensus 931 ~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~l~~y~~~~~~ 1010 (1560)
T PTZ00243 931 AAGRLMTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSFKLSAATYLYVYLGIVLL 1010 (1560)
T ss_pred ccchhhhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCcccHHHHHHHHHHH
Confidence 12345667788899999999999999987666555555666677888899999999998644334456788899988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHH
Q 000475 940 SSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSII 1019 (1470)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~ 1019 (1470)
..++.+++.+.....+.++++++|++++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+++.+
T Consensus 1011 ~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~l 1090 (1560)
T PTZ00243 1011 GTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSI 1090 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHH
Q 000475 1020 ILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENR 1099 (1470)
Q Consensus 1020 ~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~ 1099 (1470)
+++++..|.++++++|+.++++++. ++|.+..|+++|.....++|++++++|+++|+.|||+|+.++.
T Consensus 1091 i~~~~~~p~~~~~~i~~~~~~~~i~------------~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~ 1158 (1560)
T PTZ00243 1091 LVTSASQPFVLVALVPCGYLYYRLM------------QFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHL 1158 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHH
Confidence 9998888877766666665555554 8899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH---hhcCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 1100 FLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILV---TLPRSAIDPSLAGLAATYGLNLNVLQAWVIW 1176 (1470)
Q Consensus 1100 f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~---~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~ 1176 (1470)
|.+++.+..|.+.+..+.....++|+..+++++.+++.++++++.+ ....+..++|.++++++|+.++...+.++++
T Consensus 1159 ~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~ 1238 (1560)
T PTZ00243 1159 VMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVR 1238 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988776544433322 2234456789999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHhc-CCCCCcccc-----------------------CCCCCC---CCCCCCCcEEEEeEEEEe
Q 000475 1177 NLCNVENKMISVERILQFTN-IPSEAPLVI-----------------------KNSRPS---PEWPSSGKIELENLLVQY 1229 (1470)
Q Consensus 1177 ~~~~le~~~~sveRi~~~~~-~~~E~~~~~-----------------------~~~~~~---~~wp~~g~I~~~nvs~~Y 1229 (1470)
.+.++|+.|.|+||+.+|.+ .|+|+.... +...++ +.||..|.|+|+||+|+|
T Consensus 1239 ~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y 1318 (1560)
T PTZ00243 1239 QVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRY 1318 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEe
Confidence 99999999999999999996 444421100 011122 245677999999999999
Q ss_pred CCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcc
Q 000475 1230 NPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQG 1309 (1470)
Q Consensus 1230 ~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~g 1309 (1470)
+++.|+||+||||+|+||||||||||||||||||+++|+|+++|++|+|.|||+||+++++++||++|++|||||+||+|
T Consensus 1319 ~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~g 1398 (1560)
T PTZ00243 1319 REGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDG 1398 (1560)
T ss_pred CCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccc
Confidence 98878899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccC-CCEEEEeccCCCCC
Q 000475 1310 TVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKK-KRILVLDEATASID 1388 (1470)
Q Consensus 1310 TIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~-~~ILlLDEaTsslD 1388 (1470)
|||+||||+++++|+|||+||++|+++++|.++|+||||.|+|+|.|||||||||||||||||++ |+|||||||||+||
T Consensus 1399 TIreNIdp~~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD 1478 (1560)
T PTZ00243 1399 TVRQNVDPFLEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANID 1478 (1560)
T ss_pred cHHHHhCcccCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999996 89999999999999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHHhh
Q 000475 1389 TATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLRR 1459 (1470)
Q Consensus 1389 ~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~~~ 1459 (1470)
++||+.||++|++.+++||||+||||++|+.+||+|+||++|+|+|+|+|+||+++++|.|++|+++....
T Consensus 1479 ~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~~~ 1549 (1560)
T PTZ00243 1479 PALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALGRS 1549 (1560)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChh
Confidence 99999999999999999999999999999999999999999999999999999988889999999887543
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-141 Score=1335.61 Aligned_cols=1086 Identities=22% Similarity=0.265 Sum_probs=822.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q 000475 334 TQRQWYFGANRIGIRVRSALTVLIYKRSMAIKFAGPSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVILYKN 412 (1470)
Q Consensus 334 ~~~~~~~~~~r~g~rir~~L~~~iy~K~L~ls~~~~~~G~ivnlms~D~~~i~~~~~~-~~~~w~~pl~i~~~~~lL~~~ 412 (1470)
....|.+...|...|+|.....++.|+-....... .+|++.+.|+.|+++|.+++.. +..+....-.++.++++.+ .
T Consensus 91 q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~-~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F-~ 168 (1228)
T KOG0055|consen 91 QVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTN-STGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGF-Y 168 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecc-cccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 34678889999999999999999999777654433 4499999999999999998742 2212222222222333222 2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 000475 413 LGAAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLK 492 (1470)
Q Consensus 413 lG~~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~ 492 (1470)
.+|..+++++.+..++......+++.+.+...+.+++-.+--+...|.+.+||++-.|+-|+...++..+.=+.-.+.-.
T Consensus 169 ~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi 248 (1228)
T KOG0055|consen 169 YGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGI 248 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHH
Confidence 37788899998888888888999998888888888888888999999999999999999999877766554222222222
Q ss_pred HHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000475 493 KYLYTCSAIA-FL-FWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFI 570 (1470)
Q Consensus 493 ~~~~~~~~~~-~~-~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL 570 (1470)
+......+.. +. +++-......++||..++..+..+++.+++.+...-+-...+.+....++.+.+|+++..+|.+.+
T Consensus 249 ~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i 328 (1228)
T KOG0055|consen 249 KKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETI 328 (1228)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHh
Confidence 2222222221 11 222233455678888888888899999999887776777888888889999999999999999999
Q ss_pred cccCCCCCC--CCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCC
Q 000475 571 KEDNQKKPI--TEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEI 647 (1470)
Q Consensus 571 ~~~e~~~~~--~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~ 647 (1470)
+..++.++. ...........|+++|+.|+||.+ ++.+.|++ ||+|++|+.+|+||||||||||++++|.|.+
T Consensus 329 ~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsR-----pdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~Rfy 403 (1228)
T KOG0055|consen 329 DRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSR-----PDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFY 403 (1228)
T ss_pred cCCCCCCcccccCCcccccccceEEEEEEecCCCC-----CcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhc
Confidence 876532221 122233345789999999999988 56788999 9999999999999999999999999999999
Q ss_pred cCCCCcEEEECC-------------EeEEEcCCCCCCCccHHHHHhcCCCC-CHHHHHHHHHHhcchHHHHhccCCCccc
Q 000475 648 PRISGAAIKVHG-------------KKAYVPQSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSV 713 (1470)
Q Consensus 648 ~~~~G~~i~~~g-------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~-~~~~y~~v~~~~~l~~d~~~l~~g~~t~ 713 (1470)
+|++|++ .++| ++|.|+|+|.+|++||+|||.||+|. ..++..++.+.....+.+..+|+|++|.
T Consensus 404 dP~~G~V-~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~ 482 (1228)
T KOG0055|consen 404 DPTSGEV-LIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTL 482 (1228)
T ss_pred CCCCceE-EEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhccc
Confidence 9999997 8887 46999999999999999999999964 5677777888888888999999999999
Q ss_pred ccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEe
Q 000475 714 VGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMK 793 (1470)
Q Consensus 714 ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~ 793 (1470)
+||+|..|||||||||||||||.+||+||||||||||||++++ ++.++.+....+|+|.|+|+|+++.+..||+|++|+
T Consensus 483 vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se-~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~ 561 (1228)
T KOG0055|consen 483 VGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESE-RVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVME 561 (1228)
T ss_pred ccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHH-HHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEE
Confidence 9999999999999999999999999999999999999999975 555778888889999999999999999999999999
Q ss_pred CCEEEEecChhhHHhhchhHHHHHHHHhhhcccCCC-CCCCCcc----cccCcccccchhhhh-----c--cCCCCCCCC
Q 000475 794 DGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVN-PPQEDKC----LSRVPCQMSQITEER-----F--ARPISCGEF 861 (1470)
Q Consensus 794 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~-----~--~~~~~~~~~ 861 (1470)
+|+|++.|+++||++. ...+.++++.++......+ +.+++.. .+...........+. . .++..+...
T Consensus 562 ~G~IvE~G~h~ELi~~-~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~~~e~~~ 640 (1228)
T KOG0055|consen 562 EGKIVEQGTHDELIAL-GGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLSVKPEGEDPE 640 (1228)
T ss_pred CCEEEEecCHHHHHhc-cchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCccccccccccccccccc
Confidence 9999999999999994 4888888877643322111 0000000 000000000000000 0 000000000
Q ss_pred CCCCccchhhcCcchHHHHHHHHHHhchhhHHHHHHHHHHHHHH----HHhhhhHHHHHhccccc---cccccchhhhHH
Q 000475 862 SGRSQDEDTELGRVKWTVYSAFITLVYKGALVPVILLCQVLFQA----LQMGSNYWIAWATDEKR---KVSREQLIGVFI 934 (1470)
Q Consensus 862 ~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~wl~~~~~~~~---~~~~~~~l~vy~ 934 (1470)
... .+++ -.+++....+|.+. .|.++.+-+++.++..+ +.......+......++ ......|...|+
T Consensus 641 ~~~-~~~~---~~~s~~~i~k~~~p--e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~ 714 (1228)
T KOG0055|consen 641 EPV-SEED---EKVSFWRIFKLNKP--EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFL 714 (1228)
T ss_pred ccc-cccc---ccccHHHHHHhccc--hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Confidence 000 1111 12222222222222 22222222222222222 22222222221111111 112234788899
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc--cChhhHHHHHhhchhhhhcchHHHHHHHHHHH
Q 000475 935 FLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDS--TPSSRILNRCSTDQSTVDTDIPYRLAGLAFAL 1012 (1470)
Q Consensus 935 ~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~--~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~ 1012 (1470)
++++.+.++.++..+++.+.+.+..++++.++|+++++.++.|||. +. |++.+|+++|...+...+...+..++.++
T Consensus 715 ~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~ 793 (1228)
T KOG0055|consen 715 GLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNI 793 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999995 45 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHH---HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhH
Q 000475 1013 IQLLSIIILMSQAAWQVFPLFL---VILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGAT 1089 (1470)
Q Consensus 1013 ~~~~~~~~v~~~~~~~~~~~~i---p~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~ 1089 (1470)
..++..+++.++++|.+.++.+ |++++..+.+. +++-..+++.+... ........|++++++
T Consensus 794 ~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~-----------~~~~~~~~~~~~~~----~ea~~iA~eai~NIr 858 (1228)
T KOG0055|consen 794 AAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQK-----------KFLKGFSKDDKKAY----EEASKIAIEAVSNIR 858 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHhhhhHHHHHHH----HHHHHHHHHHHHhHH
Confidence 9999999999999999987665 55555444441 23333333333322 223356789999999
Q ss_pred HHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH---HHHH-HHhhcCCCcCHHHHHHHHHHHH
Q 000475 1090 TIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFL---VLII-LVTLPRSAIDPSLAGLAATYGL 1165 (1470)
Q Consensus 1090 tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~---~~~~-~~~~~~~~~~~~~~gl~l~y~l 1165 (1470)
||++|+.|++|++.+.+.++...+..+... .|-++...+-.+++++. +..+ ..+...+..++..+-..+.-..
T Consensus 859 TV~al~~e~~~~~~y~~~l~~p~~~~~~~~---~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~ 935 (1228)
T KOG0055|consen 859 TVAALCAEEKFMELYKEELEKPRKSSFKRG---LISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALS 935 (1228)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHH
Confidence 999999999999999998888766655432 23333333222222222 1111 2233455555554433222222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCC-CCcceeeeeEEe
Q 000475 1166 NLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTF 1244 (1470)
Q Consensus 1166 ~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vLk~is~~i 1244 (1470)
.-............+.-....|+.++.+..+.+++-+...+... ..-+.+|+|+|+||+|+||.. ..+||+|+|++|
T Consensus 936 ~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~--~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i 1013 (1228)
T KOG0055|consen 936 FTAMALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGG--KLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSI 1013 (1228)
T ss_pred HHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCC--ccccceeEEEEeeeEeeCCCCCCchhhcCCcEEe
Confidence 22223334455566777888899999999986654321111110 111358999999999999632 126999999999
Q ss_pred eCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC-CCCCH
Q 000475 1245 PGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSD 1323 (1470)
Q Consensus 1245 ~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~-~~~sd 1323 (1470)
++||.+|+||||||||||++.+|.|+|+|++|+|.|||.||++++++.||++|++|.|||.||++||||||... .+.+.
T Consensus 1014 ~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~ 1093 (1228)
T KOG0055|consen 1014 RAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSE 1093 (1228)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987 45799
Q ss_pred HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc
Q 000475 1324 QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET 1403 (1470)
Q Consensus 1324 ~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~ 1403 (1470)
+||.+|++.++.++||.++|+||||.|||+|.+||||||||+|||||++|+||||+||||||+||.++|+.+|++|++..
T Consensus 1094 ~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~ 1173 (1228)
T KOG0055|consen 1094 EEIIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM 1173 (1228)
T ss_pred HHHHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHH
Q 000475 1404 SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1457 (1470)
Q Consensus 1404 ~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~ 1457 (1470)
.++|+|+|||||+||++||.|.|+++|+|+|.|+|++|++ ++|.|++|++...
T Consensus 1174 ~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~-~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1174 EGRTTIVIAHRLSTIQNADVIAVLKNGKVVEQGTHDELLA-KRGIYFRLVQLQS 1226 (1228)
T ss_pred cCCcEEEEecchhhhhcCCEEEEEECCEEEecccHHHHHh-CCCchHHHhhhcc
Confidence 9999999999999999999999999999999999999998 6899999998643
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=8.6e-131 Score=1335.39 Aligned_cols=1164 Identities=17% Similarity=0.173 Sum_probs=841.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 266 PQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRI 345 (1470)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~ 345 (1470)
++-..+.+++.++++.++.++..++..+.|+++..+++.+...+. ... ++..+++..++..++...+.+...++
T Consensus 51 ~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~--~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~ 124 (1466)
T PTZ00265 51 FKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGEN--VND----IIFSLVLIGIFQFILSFISSFCMDVV 124 (1466)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch--HHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344567778888888888888888899999999987642211 111 11222222233333333344455566
Q ss_pred HHHHHHHHHHHHHHHhccccc---CCCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 000475 346 GIRVRSALTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAA 421 (1470)
Q Consensus 346 g~rir~~L~~~iy~K~L~ls~---~~~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~ 421 (1470)
+.++...+...+|++.++++. .....|++.|.++.|++.+.+++. .+..+...++.++.++++++. ++|..+++.
T Consensus 125 ~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~-~sw~Lalv~ 203 (1466)
T PTZ00265 125 TTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLF-KNARLTLCI 203 (1466)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHH
Confidence 667777777777777777653 233789999999999999988764 455555556666666555553 555677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 422 LFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAI 501 (1470)
Q Consensus 422 l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~ 501 (1470)
++++++++.+...+.++.++..++..+..++..+.+.|.++|||+||.|+-|+.+.++.++..+.-.+...+.....++.
T Consensus 204 l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~ 283 (1466)
T PTZ00265 204 TCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLH 283 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777788888888888888888888999999999999999999999999999888765444333333333333332
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000475 502 AFLFWA--SPTLVSVITFGVCILLKT--------PLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIK 571 (1470)
Q Consensus 502 ~~~~~~--~p~~v~~~~f~~~~~~~~--------~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~ 571 (1470)
..+... .-..+.+++||.+.+..+ .++++.+++.+....+...++..+...+..+.++++|.+||.+.++
T Consensus 284 ~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~ 363 (1466)
T PTZ00265 284 IGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIIN 363 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 222111 122344567788777653 5888888877655544455556666678899999999999999998
Q ss_pred ccCCCCCC-CCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcC
Q 000475 572 EDNQKKPI-TEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR 649 (1470)
Q Consensus 572 ~~e~~~~~-~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~ 649 (1470)
.++..+.. .....+ ....|+++|++|+|+.+ +..+.|++ ||++++|+++||+||||||||||+++|+|.++|
T Consensus 364 ~~~~~~~~~~~~~~~-~~~~I~~~nVsf~Y~~~-----~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p 437 (1466)
T PTZ00265 364 RKPLVENNDDGKKLK-DIKKIQFKNVRFHYDTR-----KDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDP 437 (1466)
T ss_pred CCCCCCCCCCCccCC-CCCcEEEEEEEEEcCCC-----CCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccC
Confidence 76522111 111111 12369999999999854 23468999 999999999999999999999999999999999
Q ss_pred CCCcEEEEC-C-------------EeEEEcCCCCCCCccHHHHHhcCCC-------------------------------
Q 000475 650 ISGAAIKVH-G-------------KKAYVPQSSWIQTGTIRENILFGKD------------------------------- 684 (1470)
Q Consensus 650 ~~G~~i~~~-g-------------~~ayv~Q~~~i~~~Ti~eNI~~g~~------------------------------- 684 (1470)
++|++ .++ | .+|||+|+|.+|++||+|||.+|..
T Consensus 438 ~~G~I-~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (1466)
T PTZ00265 438 TEGDI-IINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRA 516 (1466)
T ss_pred CCCeE-EEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccc
Confidence 99997 773 3 3699999999999999999999742
Q ss_pred ---------------------------CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHcc
Q 000475 685 ---------------------------MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYS 737 (1470)
Q Consensus 685 ---------------------------~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~ 737 (1470)
.+++...++++.+++++.++.+|+|.+|.+|++|.+|||||||||+||||+++
T Consensus 517 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~ 596 (1466)
T PTZ00265 517 KCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIR 596 (1466)
T ss_pred cccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhc
Confidence 12345667777888999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhhcCEEEEEeCC--------------------
Q 000475 738 NSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDAADLVLVMKDG-------------------- 795 (1470)
Q Consensus 738 ~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~~d~i~~l~~G-------------------- 795 (1470)
+|+|+|||||||+||++++..+.+ .+..+. +++|+|+|||+++.+..||+|++|++|
T Consensus 597 ~P~ILlLDEpTSaLD~~se~~i~~-~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~ 675 (1466)
T PTZ00265 597 NPKILILDEATSSLDNKSEYLVQK-TINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNK 675 (1466)
T ss_pred CCCEEEEeCcccccCHHHHHHHHH-HHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccccccc
Confidence 999999999999999999887765 455554 489999999999999889999999986
Q ss_pred ---------------------------EEEEecChhhHHhhchhHHHHHHHHhhhcccCCC-C-CCCCc----cc-c-cC
Q 000475 796 ---------------------------KIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVN-P-PQEDK----CL-S-RV 840 (1470)
Q Consensus 796 ---------------------------~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~----~~-~-~~ 840 (1470)
+|+++|+++|+++..+..+..++..+........ . .+... .. . ..
T Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (1466)
T PTZ00265 676 ENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYKDSE 755 (1466)
T ss_pred ccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccccccccc
Confidence 5999999999997456677777755422211100 0 00000 00 0 00
Q ss_pred cc---cc-cch--hhhhc-cCCCCC----CCCCCCCcc------ch----hhcCcchHHHHHHHHHHhchhhHHHHHHHH
Q 000475 841 PC---QM-SQI--TEERF-ARPISC----GEFSGRSQD------ED----TELGRVKWTVYSAFITLVYKGALVPVILLC 899 (1470)
Q Consensus 841 ~~---~~-~~~--~~~~~-~~~~~~----~~~~~~~~~------e~----~~~g~v~~~~y~~y~~~~~~~~~~~~~~l~ 899 (1470)
+. .. ... .+... ...... ....+...+ ++ .......+..++.++.......+ +.+++
T Consensus 756 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 833 (1466)
T PTZ00265 756 RGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVT--IIALS 833 (1466)
T ss_pred cccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHH--HHHHH
Confidence 00 00 000 00000 000000 000000000 00 00001122233344433222211 11122
Q ss_pred HHHHHHHHhhhhHHHHHhcc----c-cccccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000475 900 QVLFQALQMGSNYWIAWATD----E-KRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAP 974 (1470)
Q Consensus 900 ~~~~~~~~~~~~~wl~~~~~----~-~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap 974 (1470)
.++..++.....+.++.+.+ . ........+..++++++++..++.+++.++....+.+...+++.++++++++.|
T Consensus 834 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~ 913 (1466)
T PTZ00265 834 ILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQE 913 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22222222223333332221 0 001112245566667777778888899999999999999999999999999999
Q ss_pred cccccc--cChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 000475 975 ISFFDS--TPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCH 1052 (1470)
Q Consensus 975 ~~ffd~--~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~ 1052 (1470)
++|||+ +++|++++|+++|++.+...+...+..++..++.+++.++++++.+|.+.++++|++++......
T Consensus 914 ~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~------- 986 (1466)
T PTZ00265 914 ISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFA------- 986 (1466)
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 999986 88999999999999999999998888888999999999899999999887776655433322110
Q ss_pred HHHHHHHHHHHHHHHHH-------------HhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 1053 YLLQAYYITTARELARM-------------VGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNC 1119 (1470)
Q Consensus 1053 ~~l~~~y~~~sr~l~rl-------------~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~ 1119 (1470)
.+......++.++. +....+.....+.|++.|+.+||+|+.|+++.+++.+..+...+......
T Consensus 987 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~ 1063 (1466)
T PTZ00265 987 ---IRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKT 1063 (1466)
T ss_pred ---HHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011111111111 12223456788999999999999999999999999999888776666554
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCC
Q 000475 1120 GTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIP 1198 (1470)
Q Consensus 1120 ~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~ 1198 (1470)
....++....+++..+..+++.++ ......+.++.+.+..++.+.+........+...+.++++...+.+|+.++++.+
T Consensus 1064 ~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~ 1143 (1466)
T PTZ00265 1064 LVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRK 1143 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 444444344444333322222222 2334467777776555444443333345556778888999999999999999876
Q ss_pred CCCccccCCCCC-CCCCCCCCcEEEEeEEEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC---
Q 000475 1199 SEAPLVIKNSRP-SPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP--- 1273 (1470)
Q Consensus 1199 ~E~~~~~~~~~~-~~~wp~~g~I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p--- 1273 (1470)
++.+.......+ ++..+..|.|+|+||+|+|+.. ..+||+|+||+|+|||++||||+||||||||+++|.|+|+|
T Consensus 1144 ~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~ 1223 (1466)
T PTZ00265 1144 SNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKND 1223 (1466)
T ss_pred CcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccc
Confidence 543211111111 0012346889999999999742 23699999999999999999999999999999999999999
Q ss_pred ---------------------------------------------------CCcEEEEcCEeCCCCCHHHHhcccEEEcc
Q 000475 1274 ---------------------------------------------------SGGRILIDGVDISMIGLQDLRSRLSIIPQ 1302 (1470)
Q Consensus 1274 ---------------------------------------------------~~G~I~IDG~dI~~i~l~~LR~~isiIpQ 1302 (1470)
++|+|+|||+||+++++++||++|+||||
T Consensus 1224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Q 1303 (1466)
T PTZ00265 1224 HHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQ 1303 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCC
Confidence 69999999999999999999999999999
Q ss_pred CCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000475 1303 DPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLD 1381 (1470)
Q Consensus 1303 dp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLD 1381 (1470)
||+||+|||||||..+ ++++|+||++|++.++++|||.++|+||||.|||+|.+|||||||||||||||+|+|+|||||
T Consensus 1304 ep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1304 EPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred CCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999999999999887 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeC----CEE-EEecChhHHhhcCCChHHHHHH
Q 000475 1382 EATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDE----GKV-LEYDSPRQLLEDNSSSFSKLVA 1454 (1470)
Q Consensus 1382 EaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~~DrIlvL~~----G~v-vE~g~p~~Ll~~~~s~f~~lv~ 1454 (1470)
||||+||++||+.|+++|++.. +++|+|+||||++++.+||+|+||++ |++ +|.|+|+||+++++|.|++|++
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~ 1463 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVK 1463 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHh
Confidence 9999999999999999999873 68999999999999999999999999 995 5999999999866899999987
Q ss_pred HH
Q 000475 1455 EF 1456 (1470)
Q Consensus 1455 ~~ 1456 (1470)
..
T Consensus 1464 ~~ 1465 (1466)
T PTZ00265 1464 LA 1465 (1466)
T ss_pred hc
Confidence 54
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.4e-87 Score=808.37 Aligned_cols=567 Identities=23% Similarity=0.335 Sum_probs=471.2
Q ss_pred hHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhcc-----ccccccccchhhhHHHhhhHHHHHHHHHHHH
Q 000475 876 KWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATD-----EKRKVSREQLIGVFIFLSGGSSFFILGRAVL 950 (1470)
Q Consensus 876 ~~~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~-----~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~ 950 (1470)
.+...+.|.+.-.++.... .++.++.....+.-++++....+ .+..........+..++.++++++.++|.++
T Consensus 134 ~~~rl~~l~~~~~~~l~~a--~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~ 211 (716)
T KOG0058|consen 134 LLKRLLGLLKPEWKWLVAA--FVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGL 211 (716)
T ss_pred HHHHHHHHhchhHHHHHHH--HHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666553333222 22223333344555554432221 1111122334455666777888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000475 951 LATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVF 1030 (1470)
Q Consensus 951 ~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~ 1030 (1470)
+.+.+.+...+++..+|++++++.++|||.+.+|++++|+++|...+...++..+...+.+.++.++.++.|+..+|.+.
T Consensus 212 ~~~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Lt 291 (716)
T KOG0058|consen 212 LQYAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLT 291 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHH
Q 000475 1031 PLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDD 1110 (1470)
Q Consensus 1031 ~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~ 1110 (1470)
.+.+..+++..... ++|-+.-|++.+...++-+...+...|.+.+++|+|+|+.|++..++|.+.+++
T Consensus 292 lv~~i~~P~v~~~~------------~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~ 359 (716)
T KOG0058|consen 292 LVTLIVVPIVALVA------------KIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLRE 359 (716)
T ss_pred HHHHHHhcHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHH
Confidence 66554444333322 566666667777777777788888999999999999999999999999888887
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 000475 1111 YSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVE 1189 (1470)
Q Consensus 1111 ~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sve 1189 (1470)
..+.........-.+....++.+++....+++. ......+.+++|..--.+.|...+...+.++...+.++.+.+.|.+
T Consensus 360 ~~~i~~k~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~ 439 (716)
T KOG0058|consen 360 VLKLSKKEAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASE 439 (716)
T ss_pred HHHHHHHHHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence 665554443333333333444444433333332 3445677889999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHh
Q 000475 1190 RILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALF 1268 (1470)
Q Consensus 1190 Ri~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~ 1268 (1470)
|+.||++.++.-+.. ....|. .-+|.|+|+||+|.|+.. ..+||||+||+|+|||.||+||||||||||++++|.
T Consensus 440 rvFel~dr~P~i~~~---G~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~ 515 (716)
T KOG0058|consen 440 RVFELMDRKPRIPLT---GTLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLL 515 (716)
T ss_pred HHHHHhccCCCCCCC---Cccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHH
Confidence 999999976654422 111222 468999999999999643 236999999999999999999999999999999999
Q ss_pred cCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccC
Q 000475 1269 RVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLD 1347 (1470)
Q Consensus 1269 rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLd 1347 (1470)
|+|+|++|+|++||+||++++.+.||++||+|.|||+||+|||||||... ...+||||.+|.++++.+|||.++|+|+|
T Consensus 516 rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~ 595 (716)
T KOG0058|consen 516 RFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYN 595 (716)
T ss_pred HhcCCCCCeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccc
Confidence 99999999999999999999999999999999999999999999999865 46899999999999999999999999999
Q ss_pred ccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEE
Q 000475 1348 APVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVL 1427 (1470)
Q Consensus 1348 t~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL 1427 (1470)
|.|||.|..|||||||||||||||+|||+|||||||||+||.++|..+|++|.+..+++|||+|||||+||+.+|+|+|+
T Consensus 596 T~VGEkG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi 675 (716)
T KOG0058|consen 596 TVVGEKGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVI 675 (716)
T ss_pred cccCCccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCEEEEecChhHHhhcCCChHHHHHHHHHhhc
Q 000475 1428 DEGKVLEYDSPRQLLEDNSSSFSKLVAEFLRRT 1460 (1470)
Q Consensus 1428 ~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~~~~ 1460 (1470)
++|+|+|.|+|+||+++++|.|++|+++.....
T Consensus 676 ~~G~V~E~G~h~eLl~~~~gly~~Lv~~q~~~~ 708 (716)
T KOG0058|consen 676 DKGRVVEMGTHDELLSKPNGLYAKLVQRQLDSG 708 (716)
T ss_pred cCCeEEecccHHHHhhCcccHHHHHHHHhcccC
Confidence 999999999999999999999999999876433
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=9.8e-81 Score=783.12 Aligned_cols=546 Identities=25% Similarity=0.371 Sum_probs=475.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhcccc-cccc--ccch-hhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 894 PVILLCQVLFQALQMGSNYWIAWATDEK-RKVS--REQL-IGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITS 969 (1470)
Q Consensus 894 ~~~~l~~~~~~~~~~~~~~wl~~~~~~~-~~~~--~~~~-l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ 969 (1470)
.-+++..++.+++.+++++...+..|.- +..+ ...+ ...+++.++...++.++|++++...+.+....+-.+++++
T Consensus 157 ~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~h 236 (709)
T COG2274 157 FEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRH 236 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3455566777888888888888766521 2222 2222 2334445566778899999999999999999999999999
Q ss_pred HhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhh
Q 000475 970 VFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTA 1049 (1470)
Q Consensus 970 vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~ 1049 (1470)
+++.|++||+++++|++++|+. |++.|...+...+...+..++..+..+++|++++|+++++.+..++++..+.
T Consensus 237 ll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~----- 310 (709)
T COG2274 237 LLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLIT----- 310 (709)
T ss_pred HHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 9999999999999999999985 7888888999888888889999999999999999999887776665554333
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHH
Q 000475 1050 RCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRI 1129 (1470)
Q Consensus 1050 ~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l 1129 (1470)
-+..+..|+..+......+...++..|++.|+.|||+.+.|.++..++.+..+++.+..+.......|.....
T Consensus 311 -------~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (709)
T COG2274 311 -------LIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIK 383 (709)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 2223334455555556667788899999999999999999999999999999999999999888888888888
Q ss_pred HHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCC
Q 000475 1130 NLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNS 1208 (1470)
Q Consensus 1130 ~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~ 1208 (1470)
.++..+....++++ +.....+.++.|..-...+..-.+...+..++..+.++.....+.||+.+..+.|+|.+. +.
T Consensus 384 ~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~---~~ 460 (709)
T COG2274 384 SLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEG---DK 460 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc---cc
Confidence 88777665555554 334456677777777777777788899999999999999999999999999999988642 22
Q ss_pred CCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCC
Q 000475 1209 RPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI 1288 (1470)
Q Consensus 1209 ~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i 1288 (1470)
.+...|+.+|+|+|+||+|+|+++.|++|+|+|++|+|||+|||||+||||||||+++|.|+|+|++|+|++||+|++++
T Consensus 461 ~~~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i 540 (709)
T COG2274 461 TLIHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDI 540 (709)
T ss_pred ccccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhc
Confidence 24455677899999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhcccEEEccCCCCCcccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHH
Q 000475 1289 GLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCL 1367 (1470)
Q Consensus 1289 ~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1367 (1470)
++++||++|++||||++||+||||||+...+ +.+|||+++|++.+|++|||.++|.||||+|+|+|.|||||||||++|
T Consensus 541 ~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlal 620 (709)
T COG2274 541 DLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLAL 620 (709)
T ss_pred CHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999998764 578899999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCC
Q 000475 1368 ARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSS 1447 (1470)
Q Consensus 1368 ARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s 1447 (1470)
||||+++|+||+||||||+||++||+.|++.|.+...+||+|+||||++++++||||+|||+|+|+|.|+|+||++. +|
T Consensus 621 ARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g 699 (709)
T COG2274 621 ARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GG 699 (709)
T ss_pred HHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999986 89
Q ss_pred hHHHHHHHH
Q 000475 1448 SFSKLVAEF 1456 (1470)
Q Consensus 1448 ~f~~lv~~~ 1456 (1470)
.|+++++..
T Consensus 700 ~y~~l~~~q 708 (709)
T COG2274 700 LYARLYQQQ 708 (709)
T ss_pred hHHHHHhcc
Confidence 999988753
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.3e-77 Score=762.20 Aligned_cols=543 Identities=27% Similarity=0.382 Sum_probs=445.5
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhccccc-c-ccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000475 896 ILLCQVLFQALQMGSNYWIAWATDEKR-K-VSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRA 973 (1470)
Q Consensus 896 ~~l~~~~~~~~~~~~~~wl~~~~~~~~-~-~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~a 973 (1470)
.+++.++...+....++++.+..+.-. . .....+...++++.++..++.++..+.....+.+...+++.++++++++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 98 (567)
T COG1132 19 AILLLLLSALLSLLLPLLIGRIIDALLADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLRL 98 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 334444555666666666665443211 1 11222334444455556666677777777888999999999999999999
Q ss_pred CcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhhH
Q 000475 974 PISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHY 1053 (1470)
Q Consensus 974 p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~ 1053 (1470)
|+++|+++++|++++|+++|++.++..+......+..+++.+++.+++++..+|.+.++++...+++.+..
T Consensus 99 ~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~--------- 169 (567)
T COG1132 99 PLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVL--------- 169 (567)
T ss_pred CHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH---------
Confidence 99999999999999999999999999988875556667888888899999999988776655544433322
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 000475 1054 LLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLF 1133 (1470)
Q Consensus 1054 ~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~ 1133 (1470)
.++.+..+...+......+.+.+.+.|+++|+.+||+|+.++...+++.+..+...+...........+.....++.
T Consensus 170 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (567)
T COG1132 170 ---SLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLS 246 (567)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333446666666677788999999999999999999999988777777776666555444444444433334443
Q ss_pred HHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCC
Q 000475 1134 NFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSP 1212 (1470)
Q Consensus 1134 ~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~ 1212 (1470)
.+....+... ......+.++.|.....+.|...+...+..+......++....+.||+.++.+.+++... ... +
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~---~~~--~ 321 (567)
T COG1132 247 SLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVED---PPD--P 321 (567)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---CCC--C
Confidence 3333322222 222345567888888899999999999999999999999999999999999987554221 111 1
Q ss_pred CCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH
Q 000475 1213 EWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD 1292 (1470)
Q Consensus 1213 ~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~ 1292 (1470)
..+..|.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+++|++|+|.|||+||+++++.+
T Consensus 322 ~~~~~~~I~f~~vsf~y~~~-~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~ 400 (567)
T COG1132 322 LKDTIGSIEFENVSFSYPGK-KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDS 400 (567)
T ss_pred CCCCCCeEEEEEEEEEcCCC-CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHH
Confidence 34556889999999999864 46999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccEEEccCCCCCcccHHHhcCcCCC-CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1293 LRSRLSIIPQDPMLFQGTVRTNLDPLEQ-HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1293 LR~~isiIpQdp~LF~gTIR~NLdp~~~-~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
||++|++|||||.||+||||+||+++.+ ++|||+++|+++++++|++.++|+|+||.|||+|.+||||||||+|||||+
T Consensus 401 lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARal 480 (567)
T COG1132 401 LRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARAL 480 (567)
T ss_pred HHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999865 799999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHH
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSK 1451 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~ 1451 (1470)
+|+|+|||||||||++|++||+.|++++++..+++|+|+||||++|+.+||+|+|||+|+|+|+|+|+||+++ +|.|++
T Consensus 481 l~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~ 559 (567)
T COG1132 481 LRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYAR 559 (567)
T ss_pred hcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHH
Confidence 9999999999999999999999999999988889999999999999999999999999999999999999986 899999
Q ss_pred HHHHHH
Q 000475 1452 LVAEFL 1457 (1470)
Q Consensus 1452 lv~~~~ 1457 (1470)
|+++..
T Consensus 560 l~~~~~ 565 (567)
T COG1132 560 LYQAQG 565 (567)
T ss_pred HHHHhh
Confidence 998765
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.7e-76 Score=750.17 Aligned_cols=560 Identities=18% Similarity=0.221 Sum_probs=438.3
Q ss_pred HHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhcccc--cccc---ccchhhhHHHhhhHHHHHHHHHHHHHH
Q 000475 878 TVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK--RKVS---REQLIGVFIFLSGGSSFFILGRAVLLA 952 (1470)
Q Consensus 878 ~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~--~~~~---~~~~l~vy~~l~~~~~~~~~~~~~~~~ 952 (1470)
+.++.|++...+.. .+.+++.++...+....++.+.+..+.- ++.+ ...++..++++.++..++.+++.++..
T Consensus 11 ~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK11174 11 RWLKQQSKPAKRWL--NLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGF 88 (588)
T ss_pred HHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666543332 2333444555556666666666544311 1111 112233344444556667777888888
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000475 953 TIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPL 1032 (1470)
Q Consensus 953 ~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1032 (1470)
..+.+...+++.++++++++.|+++|++.++|++++|+++|++.++..+...+..++..++.+++.+++++.++|++.++
T Consensus 89 ~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 168 (588)
T PRK11174 89 KAGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLI 168 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999998888888888888888888899999988766
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHH
Q 000475 1033 FLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYS 1112 (1470)
Q Consensus 1033 ~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~ 1112 (1470)
++.++++.+++. .++.+..++..+......+.+.+++.|+++|+.+||+|++|+++.+++.+..++..
T Consensus 169 ~l~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~ 236 (588)
T PRK11174 169 LLGTAPLIPLFM------------ALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFR 236 (588)
T ss_pred HHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHH
Confidence 554444333322 33334445555555556677889999999999999999999999999988888877
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 1113 CVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLA---------GLAATYGLNLNVLQAWVIWNLCNVEN 1183 (1470)
Q Consensus 1113 ~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------gl~l~y~l~l~~~~~~~i~~~~~le~ 1183 (1470)
+..........+......++..+...+++++......+.++.|.. -.++.+...+...+..+...+.++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~ 316 (588)
T PRK11174 237 QRTMEVLRMAFLSSAVLEFFASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQ 316 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 766555444444444444443332222211111111233333321 12224444556667777788888999
Q ss_pred hhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHH
Q 000475 1184 KMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTL 1263 (1470)
Q Consensus 1184 ~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTL 1263 (1470)
...+.+|+.++.+.|++.+.. ...+. ..+..+.|+|+||+|.|.++ +++|+|+||+|+|||++||||+||||||||
T Consensus 317 ~~~~~~ri~~~l~~~~~~~~~--~~~~~-~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL 392 (588)
T PRK11174 317 AVGAAESLVTFLETPLAHPQQ--GEKEL-ASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSL 392 (588)
T ss_pred HHHHHHHHHHHHcCCCcccCC--Ccccc-CCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHH
Confidence 999999999999876543211 11111 11234679999999887655 569999999999999999999999999999
Q ss_pred HHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhc
Q 000475 1264 IQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQD 1342 (1470)
Q Consensus 1264 l~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~l 1342 (1470)
+++|.|++ |++|+|.+||+|+++++.+++|++|+||||||+||+|||||||..+ ++++|+|+++|++.|++++++.++
T Consensus 393 ~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~l 471 (588)
T PRK11174 393 LNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLL 471 (588)
T ss_pred HHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhc
Confidence 99999999 9999999999999999999999999999999999999999999887 469999999999999999999999
Q ss_pred ccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcC
Q 000475 1343 QRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDND 1422 (1470)
Q Consensus 1343 p~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~D 1422 (1470)
|+|+||.|||+|.|||||||||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||
T Consensus 472 p~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD 551 (588)
T PRK11174 472 PQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWD 551 (588)
T ss_pred ccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred EEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHH
Q 000475 1423 LVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1457 (1470)
Q Consensus 1423 rIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~ 1457 (1470)
+|+||++|+++|.|+|+||+++ ++.|++|++...
T Consensus 552 ~Iivl~~G~i~e~G~~~eL~~~-~~~y~~l~~~q~ 585 (588)
T PRK11174 552 QIWVMQDGQIVQQGDYAELSQA-GGLFATLLAHRQ 585 (588)
T ss_pred EEEEEeCCeEeecCCHHHHHhc-chHHHHHHHHhh
Confidence 9999999999999999999975 689999987653
No 13
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=9.1e-76 Score=760.10 Aligned_cols=552 Identities=22% Similarity=0.304 Sum_probs=447.6
Q ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhcccc-cccc---ccchhhhHHHhhhHHHHHHHHHHHHHHHH
Q 000475 879 VYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK-RKVS---REQLIGVFIFLSGGSSFFILGRAVLLATI 954 (1470)
Q Consensus 879 ~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~-~~~~---~~~~l~vy~~l~~~~~~~~~~~~~~~~~~ 954 (1470)
.++.|++.... .+...+++.++...+.+..+++.....+.- ...+ ....+..++++.++..++.+++..+....
T Consensus 151 ~l~~~~~~~~~--~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 228 (711)
T TIGR00958 151 RLLGLSGRDWP--WLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYT 228 (711)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455554322 233344455566667777777776544311 1111 11233445555666777788888889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000475 955 AIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFL 1034 (1470)
Q Consensus 955 ~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~i 1034 (1470)
+.+...+++.++++++++.|++||++++.|++++|+++|++.++..+...+..++..++.+++.+++++..+|++.++++
T Consensus 229 ~~~~~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l 308 (711)
T TIGR00958 229 MARINLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTL 308 (711)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998876655
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHH
Q 000475 1035 VILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCV 1114 (1470)
Q Consensus 1035 p~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~ 1114 (1470)
..+++.+++. ..+.+..++..+......+...+++.|+++|+.+||+|+.|+++.+++.+..++..+.
T Consensus 309 ~~~~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~ 376 (711)
T TIGR00958 309 INLPLVFLAE------------KVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQL 376 (711)
T ss_pred HHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 5444443333 3333334444444445566778999999999999999999999999999888877666
Q ss_pred HHHHHhH---hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000475 1115 TFHNCGT---MEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERI 1191 (1470)
Q Consensus 1115 ~~~~~~~---~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi 1191 (1470)
....... ..|....+..+..+++.. +.......+.+++|.+..++.|...+...+..+...+.++.+...+.+|+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~il~--~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri 454 (711)
T TIGR00958 377 NKRKALAYAGYLWTTSVLGMLIQVLVLY--YGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKV 454 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5443322 233333222222222111 12223446788999888889999999999999999999999999999999
Q ss_pred HHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcC
Q 000475 1192 LQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRV 1270 (1470)
Q Consensus 1192 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl 1270 (1470)
.++.+.+++.+.. . ....++..|.|+|+||+|+|+.+ .+++|+|+||+|+|||++||||+||||||||+++|+|+
T Consensus 455 ~~~l~~~~~~~~~---~-~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl 530 (711)
T TIGR00958 455 FEYLDRKPNIPLT---G-TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNL 530 (711)
T ss_pred HHHhCCCCCCCCC---C-CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhc
Confidence 9999876554311 1 11123456889999999999753 34799999999999999999999999999999999999
Q ss_pred CCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCcc
Q 000475 1271 VEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAP 1349 (1470)
Q Consensus 1271 ~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~ 1349 (1470)
++|++|+|.+||+|+++++.+++|++|++|||||.+|+|||||||... .+.+|+++++++++++++++++++|+|+||.
T Consensus 531 ~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ 610 (711)
T TIGR00958 531 YQPTGGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTE 610 (711)
T ss_pred cCCCCCEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCc
Confidence 999999999999999999999999999999999999999999999865 4688999999999999999999999999999
Q ss_pred ccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeC
Q 000475 1350 VAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDE 1429 (1470)
Q Consensus 1350 v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~ 1429 (1470)
+||+|.+||||||||+|||||++++|+|||||||||+||++|++.|++ ....+++|+|+||||++++..||+|+||++
T Consensus 611 ige~G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~ 688 (711)
T TIGR00958 611 VGEKGSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKK 688 (711)
T ss_pred ccCCCCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999999 334579999999999999999999999999
Q ss_pred CEEEEecChhHHhhcCCChHHHHH
Q 000475 1430 GKVLEYDSPRQLLEDNSSSFSKLV 1453 (1470)
Q Consensus 1430 G~vvE~g~p~~Ll~~~~s~f~~lv 1453 (1470)
|+|+|.|+|+||+++ ++.|++|+
T Consensus 689 G~ive~Gt~~eL~~~-~~~y~~lv 711 (711)
T TIGR00958 689 GSVVEMGTHKQLMED-QGCYKHLV 711 (711)
T ss_pred CEEEEeeCHHHHHhC-CCchHhcC
Confidence 999999999999975 57898874
No 14
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=8.6e-75 Score=751.69 Aligned_cols=540 Identities=21% Similarity=0.271 Sum_probs=445.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhcccc-ccccc---cchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 895 VILLCQVLFQALQMGSNYWIAWATDEK-RKVSR---EQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSV 970 (1470)
Q Consensus 895 ~~~l~~~~~~~~~~~~~~wl~~~~~~~-~~~~~---~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~v 970 (1470)
.++++.++...+.+..++.+....+.- +..+. ..+...++++.++..++.+++.++....+.+...+++.++++++
T Consensus 140 ~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 219 (686)
T TIGR03797 140 AILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRL 219 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556666666666665544321 11111 11233444455566777888899999999999999999999999
Q ss_pred hcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhh
Q 000475 971 FRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTAR 1050 (1470)
Q Consensus 971 l~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 1050 (1470)
++.|++||++.++|++++|++ |++.+...+...+...+...+..++.+++++.++|++.++++.++++.+.+.
T Consensus 220 l~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~------ 292 (686)
T TIGR03797 220 LRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVT------ 292 (686)
T ss_pred HcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 999999999999999999997 7888888888777777777777777888888899988776665544433332
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHH
Q 000475 1051 CHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRIN 1130 (1470)
Q Consensus 1051 ~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~ 1130 (1470)
.+..+...+..+ ......+...+++.|+++|+.+||+|+.|+++.+++.+..++..+..+.......|......
T Consensus 293 --~~~~~~~~~~~~----~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (686)
T TIGR03797 293 --LVLGLLQVRKER----RLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNA 366 (686)
T ss_pred --HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011122222233 33344556789999999999999999999999999999999988888887777777776666
Q ss_pred HHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCC
Q 000475 1131 LLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSR 1209 (1470)
Q Consensus 1131 ~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~ 1209 (1470)
++..+...++.++ ......+.++.|.+-.+.++...+...+..+...+.++.....+.+|+.++.+.|+|.+. ...
T Consensus 367 ~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~---~~~ 443 (686)
T TIGR03797 367 VLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDE---AKT 443 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc---CcC
Confidence 6554433333322 233346778888777777788888888888999999999999999999999987766431 111
Q ss_pred CCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCC
Q 000475 1210 PSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG 1289 (1470)
Q Consensus 1210 ~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~ 1289 (1470)
+ ..+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++
T Consensus 444 ~--~~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~ 521 (686)
T TIGR03797 444 D--PGKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLD 521 (686)
T ss_pred C--CCCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCC
Confidence 1 11345789999999999866678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1290 LQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1290 l~~LR~~isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
.+++|++|++|||||.+|+|||||||..+..++|+++++|++.+++++++.++|+|+||.+||+|.+||||||||++|||
T Consensus 522 ~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialAR 601 (686)
T TIGR03797 522 VQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIAR 601 (686)
T ss_pred HHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999987668999999999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChH
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSF 1449 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f 1449 (1470)
|++++|+||+||||||+||++|++.|++.|++. ++|+|+||||++++..||+|+||++|+|+|.|+|++|+++ ++.|
T Consensus 602 All~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~~y 678 (686)
T TIGR03797 602 ALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EGLF 678 (686)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-CcHH
Confidence 999999999999999999999999999999986 6899999999999999999999999999999999999974 7899
Q ss_pred HHHHHH
Q 000475 1450 SKLVAE 1455 (1470)
Q Consensus 1450 ~~lv~~ 1455 (1470)
++|+++
T Consensus 679 ~~l~~~ 684 (686)
T TIGR03797 679 AQLARR 684 (686)
T ss_pred HHHHHh
Confidence 999874
No 15
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.8e-74 Score=735.96 Aligned_cols=544 Identities=24% Similarity=0.357 Sum_probs=440.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhcccc-cccc--ccch---hhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 896 ILLCQVLFQALQMGSNYWIAWATDEK-RKVS--REQL---IGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITS 969 (1470)
Q Consensus 896 ~~l~~~~~~~~~~~~~~wl~~~~~~~-~~~~--~~~~---l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ 969 (1470)
.+++.++...+....++++.+..+.. +..+ .... +.+++++.++..++.+++.+.....+.+...+++.+++++
T Consensus 28 ~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 107 (592)
T PRK10790 28 AVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMDA 107 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444566666667777776655421 1111 1111 1223333445556667778888888999999999999999
Q ss_pred HhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhh
Q 000475 970 VFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTA 1049 (1470)
Q Consensus 970 vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~ 1049 (1470)
+++.|+++|+..+.|++++|+++|++.++..+...+..++..++.+++.+++++..+|++.++++..+++.+.+.
T Consensus 108 l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~----- 182 (592)
T PRK10790 108 ALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVM----- 182 (592)
T ss_pred HHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 999999999999999999999999999999999999888888888888888888888887655443322222111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHH-HHH
Q 000475 1050 RCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWL-CLR 1128 (1470)
Q Consensus 1050 ~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl-~~~ 1128 (1470)
..+.+..+...+......+...+++.|+++|+.+||+|+.++++.+++.+..++..+..+.......+. ...
T Consensus 183 -------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (592)
T PRK10790 183 -------VIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPL 255 (592)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222333334444456677899999999999999999999999998887777666555444333332 222
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCC
Q 000475 1129 INLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNS 1208 (1470)
Q Consensus 1129 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~ 1208 (1470)
..++..+...++.+.......+.++.|.......|...+...+..+...+.++++...+.+|+.++.+.+++.+. ..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~---~~ 332 (592)
T PRK10790 256 LSLFSALILCGLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG---ND 332 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC---CC
Confidence 333333222222122112346778888888888888899999999999999999999999999999886654321 11
Q ss_pred CCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCC
Q 000475 1209 RPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI 1288 (1470)
Q Consensus 1209 ~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i 1288 (1470)
..++..+.|+|+||+|+|+++ +++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|++++
T Consensus 333 ---~~~~~~~~i~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~ 408 (592)
T PRK10790 333 ---DRPLQSGRIDIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSL 408 (592)
T ss_pred ---ccCCCCCeEEEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhC
Confidence 122345789999999999754 4699999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhcccEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1289 GLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1289 ~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
+.+.+|++|+||||||.+|+||||+||.++++++|++++++++++|+++++.++|+|+||.++|+|.+||||||||++||
T Consensus 409 ~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialA 488 (592)
T PRK10790 409 SHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALA 488 (592)
T ss_pred CHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999888899999999999999999999999999999999999999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCCh
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSS 1448 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~ 1448 (1470)
|||+++|+||+||||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|++|+++ ++.
T Consensus 489 RaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~-~~~ 567 (592)
T PRK10790 489 RVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAA-QGR 567 (592)
T ss_pred HHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhC-CCH
Confidence 9999999999999999999999999999999998889999999999999999999999999999999999999986 689
Q ss_pred HHHHHHHHHhh
Q 000475 1449 FSKLVAEFLRR 1459 (1470)
Q Consensus 1449 f~~lv~~~~~~ 1459 (1470)
|++|++.....
T Consensus 568 y~~l~~~~~~~ 578 (592)
T PRK10790 568 YWQMYQLQLAG 578 (592)
T ss_pred HHHHHHHHhhh
Confidence 99999876543
No 16
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.4e-74 Score=753.01 Aligned_cols=560 Identities=21% Similarity=0.263 Sum_probs=455.6
Q ss_pred hHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhcccc-cccccc---chhhhHHHhhhHHHHHHHHHHHHH
Q 000475 876 KWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK-RKVSRE---QLIGVFIFLSGGSSFFILGRAVLL 951 (1470)
Q Consensus 876 ~~~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~-~~~~~~---~~l~vy~~l~~~~~~~~~~~~~~~ 951 (1470)
.++.++.+++...+. ...++++.++..++.+..++.+....+.- +..... .+...++++.++..++.+++.++.
T Consensus 141 ~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (710)
T TIGR03796 141 LLRALWRRLRGSRGA--LLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYL 218 (710)
T ss_pred cHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566666644322 22333444555566666666666544311 111111 223334444555667788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000475 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1470)
Q Consensus 952 ~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~ 1031 (1470)
...+.+...+++.++++++++.|++||++.++|++++|++.| +.+...+...+..++..++.+++.+++++.++|++.+
T Consensus 219 ~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 297 (710)
T TIGR03796 219 RRLQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTL 297 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 5688778777888888888888888889999998877
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHH
Q 000475 1032 LFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDY 1111 (1470)
Q Consensus 1032 ~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~ 1111 (1470)
+.+.++++.+++. .++.+..+...+......+...+++.|+++|+.+||+++.|+.+.+++.+..++.
T Consensus 298 i~l~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~ 365 (710)
T TIGR03796 298 IGIAFAAINVLAL------------QLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKL 365 (710)
T ss_pred HHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHH
Confidence 7665555544333 2233333344444445566788999999999999999999999999999888888
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 000475 1112 SCVTFHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVER 1190 (1470)
Q Consensus 1112 ~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveR 1190 (1470)
.+..+.......|......++..+...++.++ ......+.++.|.+..+.++...+...+..+...+.++.....+.+|
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~r 445 (710)
T TIGR03796 366 LNAQQELGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNR 445 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666666666666665554433333222 33345677888888888888888888889999999999999999999
Q ss_pred HHHHhcCCCCCccccCC--C-CCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHH
Q 000475 1191 ILQFTNIPSEAPLVIKN--S-RPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQAL 1267 (1470)
Q Consensus 1191 i~~~~~~~~E~~~~~~~--~-~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L 1267 (1470)
+.++.+.|+|.+..... . ...+.++..|.|+++||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|
T Consensus 446 i~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL 525 (710)
T TIGR03796 446 LDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLV 525 (710)
T ss_pred HHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 99999887765321100 0 01111345688999999999987667799999999999999999999999999999999
Q ss_pred hcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhccccc
Q 000475 1268 FRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLL 1346 (1470)
Q Consensus 1268 ~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~v~~lp~gL 1346 (1470)
+|+++|++|+|.+||+|+++++.+++|++|+||||||.+|+|||||||..++ +++|+++++|++++++++++.++|+|+
T Consensus 526 ~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl 605 (710)
T TIGR03796 526 AGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGY 605 (710)
T ss_pred hcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcc
Confidence 9999999999999999999999999999999999999999999999998764 689999999999999999999999999
Q ss_pred CccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEE
Q 000475 1347 DAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLV 1426 (1470)
Q Consensus 1347 dt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlv 1426 (1470)
||.++|+|.|||||||||++||||++++|+||+||||||+||++|++.|.+.|++ .++|+|+||||++++.+||||+|
T Consensus 606 ~t~i~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iiv 683 (710)
T TIGR03796 606 DAELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIV 683 (710)
T ss_pred cceeccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEE
Confidence 9999999999999999999999999999999999999999999999999999987 58999999999999999999999
Q ss_pred EeCCEEEEecChhHHhhcCCChHHHHH
Q 000475 1427 LDEGKVLEYDSPRQLLEDNSSSFSKLV 1453 (1470)
Q Consensus 1427 L~~G~vvE~g~p~~Ll~~~~s~f~~lv 1453 (1470)
|++|+|+|.|+|++|+++ ++.|++|+
T Consensus 684 l~~G~i~~~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 684 LERGKVVQRGTHEELWAV-GGAYARLI 709 (710)
T ss_pred EeCCEEEEecCHHHHHHc-CCcHHHHh
Confidence 999999999999999974 68899886
No 17
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.7e-74 Score=751.40 Aligned_cols=558 Identities=21% Similarity=0.272 Sum_probs=448.8
Q ss_pred hHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhcccc-ccccc---cchhhhHHHhhhHHHHHHHHHHHHH
Q 000475 876 KWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK-RKVSR---EQLIGVFIFLSGGSSFFILGRAVLL 951 (1470)
Q Consensus 876 ~~~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~-~~~~~---~~~l~vy~~l~~~~~~~~~~~~~~~ 951 (1470)
++..++.|++...+. +..++++.++..++.++.++++....|.- +.... ..+...++++.+...++.+++.++.
T Consensus 143 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (708)
T TIGR01193 143 SLLKFIPLITRQKKL--IVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLL 220 (708)
T ss_pred hHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566676654332 23344455566667777777777655421 11111 1122233334445566778888899
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000475 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1470)
Q Consensus 952 ~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~ 1031 (1470)
...+.+...+++.++++++++.|+.||++.++|++++|++ |.+.+...+...+...+..++.+++.+++++.++|++++
T Consensus 221 ~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 299 (708)
T TIGR01193 221 NVLGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFL 299 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999999999999999999998 888887777666666677777777777778888988776
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHH
Q 000475 1032 LFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDY 1111 (1470)
Q Consensus 1032 ~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~ 1111 (1470)
+++..+++++.+. ..+.+..++..+......+...+++.|+++|+.+||+|+.|+++.+++.+..++.
T Consensus 300 i~l~~~~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~ 367 (708)
T TIGR01193 300 LSLLSIPVYAVII------------ILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDY 367 (708)
T ss_pred HHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHH
Confidence 6554444433322 2333444555555666677788999999999999999999999999998888877
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHH-HHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 000475 1112 SCVTFHNCGTMEWLCLRINLLFNFAFFLV-LIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVER 1190 (1470)
Q Consensus 1112 ~~~~~~~~~~~~wl~~~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveR 1190 (1470)
.+..+.......+......++..+...++ .+.......+.++.|.+..+.++...+...+..+...+.++.....+++|
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~r 447 (708)
T TIGR01193 368 LNKSFKYQKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNR 447 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666554444443333333332222211 12223335778888888888888888888889999999999999999999
Q ss_pred HHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcC
Q 000475 1191 ILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRV 1270 (1470)
Q Consensus 1191 i~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl 1270 (1470)
+.++.+.|+|.+.. ....+.++..|.|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+
T Consensus 448 i~~~l~~~~e~~~~---~~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl 523 (708)
T TIGR01193 448 LNEVYLVDSEFINK---KKRTELNNLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGF 523 (708)
T ss_pred HHHHHcCCCccccc---ccccCCCCCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhcc
Confidence 99999887765321 1112234456899999999999744 5699999999999999999999999999999999999
Q ss_pred CCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC--CCCCHHHHHHHHHHcCcHHHHHhcccccCc
Q 000475 1271 VEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL--EQHSDQEIWEVINKCHLAEIVRQDQRLLDA 1348 (1470)
Q Consensus 1271 ~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~--~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt 1348 (1470)
++|++|+|++||+|+++++.+++|++|+||||||.+|+|||||||..+ .+++|++++++++.+++++++.++|+||||
T Consensus 524 ~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt 603 (708)
T TIGR01193 524 FQARSGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQT 603 (708)
T ss_pred CCCCCcEEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCc
Confidence 999999999999999999999999999999999999999999999876 468999999999999999999999999999
Q ss_pred cccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEe
Q 000475 1349 PVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLD 1428 (1470)
Q Consensus 1349 ~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~ 1428 (1470)
.++|+|.+||||||||++||||++++|+||+||||||+||++|++.|++.|++. +++|+|+||||++++..||+|+||+
T Consensus 604 ~i~e~G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~ 682 (708)
T TIGR01193 604 ELSEEGSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLD 682 (708)
T ss_pred EecCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEE
Confidence 999999999999999999999999999999999999999999999999999974 7899999999999999999999999
Q ss_pred CCEEEEecChhHHhhcCCChHHHHHH
Q 000475 1429 EGKVLEYDSPRQLLEDNSSSFSKLVA 1454 (1470)
Q Consensus 1429 ~G~vvE~g~p~~Ll~~~~s~f~~lv~ 1454 (1470)
+|+++|.|+|++|+++ +|.|++|++
T Consensus 683 ~G~i~~~G~~~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 683 HGKIIEQGSHDELLDR-NGFYASLIH 707 (708)
T ss_pred CCEEEEECCHHHHHhc-CCcHHHHhh
Confidence 9999999999999985 689999875
No 18
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3e-73 Score=725.85 Aligned_cols=505 Identities=22% Similarity=0.294 Sum_probs=435.6
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHH
Q 000475 935 FLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQ 1014 (1470)
Q Consensus 935 ~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~ 1014 (1470)
++.++..++.+++.++....+.+....++..+++++++.|.++|++...|++++|+++|++.+...+...+..++..++.
T Consensus 73 ~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~ 152 (582)
T PRK11176 73 GLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGAS 152 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666677777788888999999999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhh
Q 000475 1015 LLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCF 1094 (1470)
Q Consensus 1015 ~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf 1094 (1470)
+++.+++++..+|+++++++..+++.+++. .+..+..++..+......+...+++.|.++|+.+||+|
T Consensus 153 ~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~ 220 (582)
T PRK11176 153 IIGLFIMMFYYSWQLSLILIVIAPIVSIAI------------RVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIF 220 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHh
Confidence 999999999999987776655544433322 22223333334444455677889999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHH
Q 000475 1095 NQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAW 1173 (1470)
Q Consensus 1095 ~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~ 1173 (1470)
+.++.+.+++.+..+...+..........|.....+++..+...+++++ ......+.+++|...++.++...+...+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~ 300 (582)
T PRK11176 221 GGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKS 300 (582)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888887777777777776666655544333332 233445788999988888888888899999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEE
Q 000475 1174 VIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVV 1253 (1470)
Q Consensus 1174 ~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIV 1253 (1470)
+...+..+.+...+.+|+.++.+.++|.+. ... ...|..+.|+++||+|+|+++.+++|+|+||+|++||++|||
T Consensus 301 l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~---~~~--~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIv 375 (582)
T PRK11176 301 LTNVNAQFQRGMAACQTLFAILDLEQEKDE---GKR--VIERAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALV 375 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcCCC---CCc--CCCCCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEE
Confidence 999999999999999999999987665321 111 112345689999999999876567999999999999999999
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC--CCCCHHHHHHHHH
Q 000475 1254 GRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL--EQHSDQEIWEVIN 1331 (1470)
Q Consensus 1254 GrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~--~~~sd~eI~~aL~ 1331 (1470)
|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++||||||++|+||||+||... ++++|++++++++
T Consensus 376 G~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~ 455 (582)
T PRK11176 376 GRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAAR 455 (582)
T ss_pred CCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999864 3489999999999
Q ss_pred HcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEE
Q 000475 1332 KCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITV 1411 (1470)
Q Consensus 1332 ~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~I 1411 (1470)
++++++++.++|+|+||.+||+|.+||||||||++|||||+++|+||+||||||+||++|++.|.+.|++..++||+|+|
T Consensus 456 ~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~V 535 (582)
T PRK11176 456 MAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVI 535 (582)
T ss_pred HhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998889999999
Q ss_pred ecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHH
Q 000475 1412 AHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1457 (1470)
Q Consensus 1412 AHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~ 1457 (1470)
|||++++..||+|++|++|+++|.|+|++|+++ ++.|++|+++..
T Consensus 536 tHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~-~~~y~~l~~~~~ 580 (582)
T PRK11176 536 AHRLSTIEKADEILVVEDGEIVERGTHAELLAQ-NGVYAQLHKMQF 580 (582)
T ss_pred ecchHHHHhCCEEEEEECCEEEEeCCHHHHHhC-CChHHHHHHHHh
Confidence 999999999999999999999999999999985 589999987653
No 19
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6.2e-73 Score=735.23 Aligned_cols=549 Identities=21% Similarity=0.246 Sum_probs=443.9
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhcccc-cccccc---chhhhHHHhhhHHHHHHHHHHHHHH
Q 000475 877 WTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK-RKVSRE---QLIGVFIFLSGGSSFFILGRAVLLA 952 (1470)
Q Consensus 877 ~~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~-~~~~~~---~~l~vy~~l~~~~~~~~~~~~~~~~ 952 (1470)
+..++.+++...+. +..++++.++..++..+.++.+....|.. +..+.. .+...++++.++..++.+++.++..
T Consensus 135 ~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (694)
T TIGR03375 135 KHWFWSTLKESWPL--YRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLD 212 (694)
T ss_pred chHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456666543322 23344445556666667777766554321 111111 1222333344456677788889999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000475 953 TIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPL 1032 (1470)
Q Consensus 953 ~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1032 (1470)
..+.+...+++.++++++++.|++| ++.++|++++|+ +|++.+...+...+...+..++.+++.++++++++|+++++
T Consensus 213 ~~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 290 (694)
T TIGR03375 213 VAGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999998 788999999999 79999999888887777777777777788888889887766
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHH
Q 000475 1033 FLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYS 1112 (1470)
Q Consensus 1033 ~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~ 1112 (1470)
.+..+++++.+. .++.+..++..+......+...+++.|+++|+.+||+|+.|+.+.+++.+..++..
T Consensus 291 ~l~~~~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~ 358 (694)
T TIGR03375 291 PLVAIPLILLPG------------LLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALA 358 (694)
T ss_pred HHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHH
Confidence 554444433322 22333344444444556678889999999999999999999999999999888877
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000475 1113 CVTFHNCGTMEWLCLRINLLFNFAFFLVLI-ILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERI 1191 (1470)
Q Consensus 1113 ~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~-~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi 1191 (1470)
+..+.......+......++..+...++.+ .......+.++.|..-.+.++...+...+..+...+.++.....+.+|+
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri 438 (694)
T TIGR03375 359 RSGLKSRFLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSL 438 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777666555555544444444332222222 2233446778888888888888888888899999999999999999999
Q ss_pred HHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCC
Q 000475 1192 LQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV 1271 (1470)
Q Consensus 1192 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~ 1271 (1470)
.++.+.|+|.+.. .......+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|
T Consensus 439 ~~il~~~~e~~~~---~~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~ 515 (694)
T TIGR03375 439 DELMQLPVERPEG---TRFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLY 515 (694)
T ss_pred HHHHcCCCCCCCC---CCCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 9999887764321 1111112345789999999999766667999999999999999999999999999999999999
Q ss_pred CCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccc
Q 000475 1272 EPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPV 1350 (1470)
Q Consensus 1272 ~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v 1350 (1470)
+|++|+|.+||+|+++++++++|+++++|||||.+|+|||||||.... +++|+|+++|++++++++++.++|+|+||.+
T Consensus 516 ~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i 595 (694)
T TIGR03375 516 QPTEGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQI 595 (694)
T ss_pred CCCCceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCccccccee
Confidence 999999999999999999999999999999999999999999999775 4899999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCC
Q 000475 1351 AEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEG 1430 (1470)
Q Consensus 1351 ~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G 1430 (1470)
+|+|.|||||||||++||||++++|+||+||||||+||++|++.|++.|++..+++|+|+||||++++..||+|+||++|
T Consensus 596 ~e~G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G 675 (694)
T TIGR03375 596 GERGRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNG 675 (694)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred EEEEecChhHHhhc
Q 000475 1431 KVLEYDSPRQLLED 1444 (1470)
Q Consensus 1431 ~vvE~g~p~~Ll~~ 1444 (1470)
+++|.|+|+||+++
T Consensus 676 ~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 676 RIVADGPKDQVLEA 689 (694)
T ss_pred EEEeeCCHHHHHHH
Confidence 99999999999875
No 20
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.1e-72 Score=716.13 Aligned_cols=555 Identities=20% Similarity=0.245 Sum_probs=437.4
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhcccc---ccc---cccc--hhhhHHHhhhHHHHHHHHHHHHH
Q 000475 880 YSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK---RKV---SREQ--LIGVFIFLSGGSSFFILGRAVLL 951 (1470)
Q Consensus 880 y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~---~~~---~~~~--~l~vy~~l~~~~~~~~~~~~~~~ 951 (1470)
++.|++...+.. .+.+++.++..++.++.++.+.|..+.. ... .... ....+.+++++..++.++..++.
T Consensus 7 ~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (574)
T PRK11160 7 FLKLYKRHWFML--SLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVS 84 (574)
T ss_pred HHHHHhhhhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555433222 2333344455555556666666554321 110 0011 11123334445566677777788
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000475 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1470)
Q Consensus 952 ~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~ 1031 (1470)
...+.+...+++.++++++++.|+.||++.+.|++++|+++|++.++..+...+..++..++.+++.+++++..+|++.+
T Consensus 85 ~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 164 (574)
T PRK11160 85 HDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLAL 164 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999988888999999999999999999998877
Q ss_pred HHHHHHHHHH-HHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHH
Q 000475 1032 LFLVILGISI-WYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDD 1110 (1470)
Q Consensus 1032 ~~ip~~~~~~-~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~ 1110 (1470)
+++.++++.. .+. .++.+..+...+......+.+.+.+.|+++|+.+||+|+.|+++.+++.+..++
T Consensus 165 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~ 232 (574)
T PRK11160 165 TLGGILLLLLLLLP------------LLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQ 232 (574)
T ss_pred HHHHHHHHHHHHHH------------HHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHH
Confidence 6543332221 111 223333444445555667778889999999999999999999999999999988
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHH
Q 000475 1111 YSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYG-LNLNVLQAWVIWNLCNVENKMISVE 1189 (1470)
Q Consensus 1111 ~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~-l~l~~~~~~~i~~~~~le~~~~sve 1189 (1470)
+.+..........+.....+++..+...++.++......+.++.|..-.++.|. +.....+..+...+.++.....+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 312 (574)
T PRK11160 233 WLAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGGVGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASAR 312 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777766666666555565554443333332222224555555544444443 2233344555667778888899999
Q ss_pred HHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhc
Q 000475 1190 RILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFR 1269 (1470)
Q Consensus 1190 Ri~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~r 1269 (1470)
|+.++.+.|+|.+.. ...++ .+..+.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|
T Consensus 313 ri~~ll~~~~~~~~~--~~~~~--~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g 388 (574)
T PRK11160 313 RINEITEQKPEVTFP--TTSTA--AADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTR 388 (574)
T ss_pred HHHHHHhCCCCCCCC--cccCC--CCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhc
Confidence 999999876653211 11111 13457899999999997654569999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCc
Q 000475 1270 VVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDA 1348 (1470)
Q Consensus 1270 l~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt 1348 (1470)
+++|++|+|.+||+|+++++.+++|++++++||||.+|+||||||+... .+.+|++++++++++++++++.+ |+||||
T Consensus 389 ~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT 467 (574)
T PRK11160 389 AWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNA 467 (574)
T ss_pred CCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCc
Confidence 9999999999999999999999999999999999999999999999865 36899999999999999999999 999999
Q ss_pred cccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEe
Q 000475 1349 PVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLD 1428 (1470)
Q Consensus 1349 ~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~ 1428 (1470)
.+||+|.+||||||||++||||++++|+||+||||||++|++|++.|++.|++..+++|+|+||||++++.+||+|++|+
T Consensus 468 ~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~ 547 (574)
T PRK11160 468 WLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMD 547 (574)
T ss_pred hhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CCEEEEecChhHHhhcCCChHHHHHH
Q 000475 1429 EGKVLEYDSPRQLLEDNSSSFSKLVA 1454 (1470)
Q Consensus 1429 ~G~vvE~g~p~~Ll~~~~s~f~~lv~ 1454 (1470)
+|+++|.|+|+||+++ ++.|++|++
T Consensus 548 ~G~i~~~g~~~~l~~~-~g~y~~l~~ 572 (574)
T PRK11160 548 NGQIIEQGTHQELLAQ-QGRYYQLKQ 572 (574)
T ss_pred CCeEEEeCCHHHHHhc-CcHHHHHHh
Confidence 9999999999999975 789999876
No 21
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=6.4e-72 Score=712.77 Aligned_cols=542 Identities=22% Similarity=0.313 Sum_probs=459.7
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcccc---cccc-ccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000475 897 LLCQVLFQALQMGSNYWIAWATDEK---RKVS-REQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFR 972 (1470)
Q Consensus 897 ~l~~~~~~~~~~~~~~wl~~~~~~~---~~~~-~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ 972 (1470)
+++.++..++.....++++...+.. .... ...+...++++.+...++.+++.++....+.+....++..+++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~~ 99 (571)
T TIGR02203 20 GVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLLG 99 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3344555555555666665433211 1111 11223345556666677778888999999999999999999999999
Q ss_pred CCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 000475 973 APISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCH 1052 (1470)
Q Consensus 973 ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~ 1052 (1470)
.|.++|++.+.|++++|+++|++.++..+...+..++..++.+++.++++++++|+++++++.++++.+++.
T Consensus 100 ~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~-------- 171 (571)
T TIGR02203 100 LPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILM-------- 171 (571)
T ss_pred CCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH--------
Confidence 999999999999999999999999999999999999999999999999999999998887776666555443
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHH
Q 000475 1053 YLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLL 1132 (1470)
Q Consensus 1053 ~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l 1132 (1470)
.++.+..++..+......++..+++.|+++|+.+||+++.++++.+++.+..++..+..........+.....+++
T Consensus 172 ----~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (571)
T TIGR02203 172 ----RRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLI 247 (571)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555566666666778899999999999999999999999999999999998888877777777776666665
Q ss_pred HHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCC
Q 000475 1133 FNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPS 1211 (1470)
Q Consensus 1133 ~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~ 1211 (1470)
..+...+++++ ......+.+++|.+..+.++...+...+..+...+.++.+...+.+|+.++.+.++|.+. ...+.
T Consensus 248 ~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~---~~~~~ 324 (571)
T TIGR02203 248 ASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDT---GTRAI 324 (571)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC---CCCCC
Confidence 55433332222 233456788999998888999999999999999999999999999999999987665431 11111
Q ss_pred CCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHH
Q 000475 1212 PEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ 1291 (1470)
Q Consensus 1212 ~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~ 1291 (1470)
+ +..+.|+++||+|+|+++.+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||+|+++++.+
T Consensus 325 ~--~~~~~i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~ 402 (571)
T TIGR02203 325 E--RARGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLA 402 (571)
T ss_pred C--CCCCeEEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHH
Confidence 1 23568999999999976556799999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcCC--CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPLE--QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~~--~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
++|++++|+||||.+|+||||+||..+. +.+|++++++++++++++++.++|+||||.++|+|.+||||||||+||||
T Consensus 403 ~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLAR 482 (571)
T TIGR02203 403 SLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIAR 482 (571)
T ss_pred HHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHH
Confidence 9999999999999999999999998763 68999999999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChH
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSF 1449 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f 1449 (1470)
|++++|+||+||||||+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++++++ ++.|
T Consensus 483 all~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~-~~~~ 561 (571)
T TIGR02203 483 ALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLAR-NGLY 561 (571)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHc-CCHH
Confidence 999999999999999999999999999999998899999999999999999999999999999999999999975 6789
Q ss_pred HHHHHHH
Q 000475 1450 SKLVAEF 1456 (1470)
Q Consensus 1450 ~~lv~~~ 1456 (1470)
++++.+.
T Consensus 562 ~~~~~~~ 568 (571)
T TIGR02203 562 AQLHNMQ 568 (571)
T ss_pred HHHHHHh
Confidence 9887754
No 22
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.8e-71 Score=720.89 Aligned_cols=561 Identities=21% Similarity=0.280 Sum_probs=454.7
Q ss_pred hHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhcccc-cccc--c-cchhhhHHHhhhHHHHHHHHHHHHH
Q 000475 876 KWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK-RKVS--R-EQLIGVFIFLSGGSSFFILGRAVLL 951 (1470)
Q Consensus 876 ~~~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~-~~~~--~-~~~l~vy~~l~~~~~~~~~~~~~~~ 951 (1470)
++..++.+++...+. +..++++.++..++.+..++.+....+.- +..+ . ..+...++++.++..++.+++.++.
T Consensus 126 ~~~~~~~~~~~~~~~--~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~ 203 (694)
T TIGR01846 126 GFSWFIPAIIRYRKQ--FREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLF 203 (694)
T ss_pred cHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566666543322 22333444555556666677666544321 1111 1 1223334444555677788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000475 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1470)
Q Consensus 952 ~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~ 1031 (1470)
...+.+...+++.++++++++.|++||++.+.|++++|+ +|++.+...+...+..++..++.+++.++++++++|++.+
T Consensus 204 ~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 282 (694)
T TIGR01846 204 AHLTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTG 282 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 6999999888877777777777777777888889998877
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHH
Q 000475 1032 LFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDY 1111 (1470)
Q Consensus 1032 ~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~ 1111 (1470)
+++..++++..+. .+..+..+...+......+...+++.|+++|+.+||+|+.|+.+.+++.+..++.
T Consensus 283 i~l~~~~~~~~i~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~ 350 (694)
T TIGR01846 283 VVIGSLVCYALLS------------VFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAY 350 (694)
T ss_pred HHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHH
Confidence 6654444433322 1111222222333334456778999999999999999999999999999999988
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 000475 1112 SCVTFHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVER 1190 (1470)
Q Consensus 1112 ~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveR 1190 (1470)
.+..+.......+.....+++..+...++.++ ......+.++.|.+..+.++...+...+..+...+.+++....+.+|
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~r 430 (694)
T TIGR01846 351 VAASFRVTNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALER 430 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877777666676666666555443333222 23344677888888888888888888899999999999999999999
Q ss_pred HHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcC
Q 000475 1191 ILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRV 1270 (1470)
Q Consensus 1191 i~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl 1270 (1470)
+.++.+.|+|.+.. ...+.+ +..|.|+++||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+
T Consensus 431 i~~~l~~~~e~~~~--~~~~~~--~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~ 506 (694)
T TIGR01846 431 LGDILNSPTEPRSA--GLAALP--ELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRL 506 (694)
T ss_pred HHHHHcCCCCccCC--CCCCCC--CCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 99999887764311 111111 23578999999999987666799999999999999999999999999999999999
Q ss_pred CCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCcc
Q 000475 1271 VEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAP 1349 (1470)
Q Consensus 1271 ~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~ 1349 (1470)
++|++|+|.+||+|+++++.+++|+++++|||||.+|+|||||||... .+++|++++++++++++++++.++|+|+||.
T Consensus 507 ~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~ 586 (694)
T TIGR01846 507 YTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTE 586 (694)
T ss_pred CCCCCceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcE
Confidence 999999999999999999999999999999999999999999999875 4689999999999999999999999999999
Q ss_pred ccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeC
Q 000475 1350 VAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDE 1429 (1470)
Q Consensus 1350 v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~ 1429 (1470)
++|+|.+||||||||++||||++++|+||+||||||+||++|++.+.+.|++..+++|+|+||||++++..||+|++|++
T Consensus 587 i~~~g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~ 666 (694)
T TIGR01846 587 VGEKGANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEK 666 (694)
T ss_pred ecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred CEEEEecChhHHhhcCCChHHHHHHHH
Q 000475 1430 GKVLEYDSPRQLLEDNSSSFSKLVAEF 1456 (1470)
Q Consensus 1430 G~vvE~g~p~~Ll~~~~s~f~~lv~~~ 1456 (1470)
|+++|.|+|++|+++ +|.|++|+++.
T Consensus 667 G~i~~~g~~~~l~~~-~~~y~~l~~~~ 692 (694)
T TIGR01846 667 GQIAESGRHEELLAL-QGLYARLWQQQ 692 (694)
T ss_pred CEEEEeCCHHHHHHc-CChHHHHHHhh
Confidence 999999999999985 68999998753
No 23
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-71 Score=659.85 Aligned_cols=510 Identities=21% Similarity=0.273 Sum_probs=424.4
Q ss_pred hhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHH
Q 000475 929 LIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGL 1008 (1470)
Q Consensus 929 ~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~ 1008 (1470)
+++..+++.++..+....+.......+.++...++.++++++.+.+..+-...|+|++.+.++.-++.++..+...+...
T Consensus 42 ~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~ 121 (559)
T COG4988 42 LLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQM 121 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445555666667777777788888888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHH---HHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhh
Q 000475 1009 AFALIQLLSIIILMSQAAWQVFPL---FLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESI 1085 (1470)
Q Consensus 1009 ~~~~~~~~~~~~v~~~~~~~~~~~---~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl 1085 (1470)
+.+.+..+.+++.++..+|...++ ..|++++++.+. ...++...+.....-..+.+||-+.+
T Consensus 122 ~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilv---------------g~~a~~~s~~~~~~~~~ls~~FLD~L 186 (559)
T COG4988 122 FLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILV---------------GLAAKDASEKQFSALARLSGHFLDRL 186 (559)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH---------------HHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999976554 446655544322 11122333333344456789999999
Q ss_pred hhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhh-cC-CCcCHHHHHHHHHH
Q 000475 1086 AGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTL-PR-SAIDPSLAGLAATY 1163 (1470)
Q Consensus 1086 ~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~-~~-~~~~~~~~gl~l~y 1163 (1470)
+|+.|+|+|+..+...++..+.-.++.+..+.....+---+..+|++..+.++.+++..... .. |.++-...-+++..
T Consensus 187 rGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiL 266 (559)
T COG4988 187 RGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLIL 266 (559)
T ss_pred cChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHH
Confidence 99999999999999999999998888888887777776667888888887777666654322 22 33433333334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEE
Q 000475 1164 GLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCT 1243 (1470)
Q Consensus 1164 ~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~ 1243 (1470)
+.-+-..+.-+-..+....+...+.+.+..+.+.|.+.+... ......|.....|+.+|++++|+++. ++++|+||+
T Consensus 267 APEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~--~~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t 343 (559)
T COG4988 267 APEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSG--EKAEVANEPPIEISLENLSFRYPDGK-PALSDLNLT 343 (559)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCc--cccccccCCCceeeecceEEecCCCC-cccCCceeE
Confidence 444555555555566666677788999999998776644211 11123333345667779999998764 799999999
Q ss_pred eeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcCC-CCC
Q 000475 1244 FPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHS 1322 (1470)
Q Consensus 1244 i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~-~~s 1322 (1470)
++||+++||||+||||||||+++|.|+.+|++|+|.+||+|+.+++.+++|+++++|||+|++|+|||||||...+ +.+
T Consensus 344 ~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s 423 (559)
T COG4988 344 IKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDAS 423 (559)
T ss_pred ecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998765 489
Q ss_pred HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHh
Q 000475 1323 DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREE 1402 (1470)
Q Consensus 1323 d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~ 1402 (1470)
|+||+++++++++.++++. |+|||+.+||+|.+|||||+||++||||++++++++++|||||+||.+||+.|++.|.+.
T Consensus 424 ~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l 502 (559)
T COG4988 424 DEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQEL 502 (559)
T ss_pred HHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHH
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHHh
Q 000475 1403 TSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLR 1458 (1470)
Q Consensus 1403 ~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~~ 1458 (1470)
++++|||+||||++.+.++|+|+|||+|+++|.|+|++|.++ ++.|++|+++...
T Consensus 503 ~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q~~ 557 (559)
T COG4988 503 AKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQEG 557 (559)
T ss_pred HhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999985 7899999988654
No 24
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.8e-71 Score=643.72 Aligned_cols=492 Identities=22% Similarity=0.314 Sum_probs=413.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 945 LGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQ 1024 (1470)
Q Consensus 945 ~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~ 1024 (1470)
++.-+.......+.-..++.++|+++...+..-...-..|+++||+..|++.+|+.+-..+...+.++...++.++.+.+
T Consensus 76 Y~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f 155 (573)
T COG4987 76 YVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSF 155 (573)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 33333445677788888999999999988888889999999999999999999999999998888888888888888888
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHH
Q 000475 1025 AAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRS 1104 (1470)
Q Consensus 1025 ~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~ 1104 (1470)
.+|++.+.+...+.+...+ +.-.+.+..|...+--...++.+.++|.|.+.|....+.||.+++|.+.+
T Consensus 156 ~~~~~Alll~~~ll~~lli-----------~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l 224 (573)
T COG4987 156 FSIPLALLLGLILLLLLLI-----------IPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTAL 224 (573)
T ss_pred hhHHHHHHHHHHHHHHHHH-----------HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHH
Confidence 8888765544333332221 11333445666666666778899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH-HHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000475 1105 HSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFF-LVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVI-WNLCNVE 1182 (1470)
Q Consensus 1105 ~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~-~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i-~~~~~le 1182 (1470)
....+...+..........|-...+.++..+.+. ..++.......|..+...+.+++.-.+.....+.-+. ..+.++.
T Consensus 225 ~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lg 304 (573)
T COG4987 225 EATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLG 304 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhh
Confidence 9999999999999999999999999988887766 3333333344554442222222222122222222233 4567888
Q ss_pred HhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCC-cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHH
Q 000475 1183 NKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSG-KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKS 1261 (1470)
Q Consensus 1183 ~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g-~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKS 1261 (1470)
...-|.+|+.+..+.++|.... . +.-|..+ .++++||+|+|+.+.+++|+|+||++++||||||+||||||||
T Consensus 305 q~~~Sa~Rl~~i~~q~~e~~~~---~---~~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKS 378 (573)
T COG4987 305 QVIASARRLNDILDQKPEVTFP---D---EQTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKS 378 (573)
T ss_pred HHHHHHHHHhhhccCCcccCCC---c---cccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHH
Confidence 8889999999988766665422 1 1112222 7999999999998888999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHH
Q 000475 1262 TLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVR 1340 (1470)
Q Consensus 1262 TLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~ 1340 (1470)
|++++|.|.++|++|+|..+|.+++.++.+++|+.|++++|.+.+|+||+|+||... .+.||||+|++|+++||.++++
T Consensus 379 TllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~ 458 (573)
T COG4987 379 TLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLE 458 (573)
T ss_pred HHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999764 4689999999999999999999
Q ss_pred hcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh
Q 000475 1341 QDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID 1420 (1470)
Q Consensus 1341 ~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~ 1420 (1470)
+.|+||+|.+||+|.+||||||||++|||+||++.++++|||||.+||++||+.|.+.|.+..+|+|+|+||||+..+..
T Consensus 459 ~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~ 538 (573)
T COG4987 459 SAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLER 538 (573)
T ss_pred hChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCEEEEecChhHHhhcCCChHHHHHH
Q 000475 1421 NDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVA 1454 (1470)
Q Consensus 1421 ~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~ 1454 (1470)
||||+|||+|+++|.|+|.+|++ ++|.|++|++
T Consensus 539 ~drIivl~~Gkiie~G~~~~Ll~-~~g~~~~l~q 571 (573)
T COG4987 539 MDRIIVLDNGKIIEEGTHAELLA-NNGRYKRLYQ 571 (573)
T ss_pred cCEEEEEECCeeeecCCHHhhhc-cccHHHHHhc
Confidence 99999999999999999999998 5799999865
No 25
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.3e-73 Score=715.30 Aligned_cols=514 Identities=22% Similarity=0.308 Sum_probs=413.6
Q ss_pred cchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHH
Q 000475 927 EQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLA 1006 (1470)
Q Consensus 927 ~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~ 1006 (1470)
..+...|+.++++..+..++....+...+.|...+++.+.+++++|++++|||++..|.+..|+++|++.+.+.+...+.
T Consensus 71 ~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg 150 (1228)
T KOG0055|consen 71 SKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVG 150 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHHH
Confidence 45666777888888888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhh
Q 000475 1007 GLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIA 1086 (1470)
Q Consensus 1007 ~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~ 1086 (1470)
.++..+.++++.+++.++..|++.++++++.++..... ..+.+..-.+...+...-+.--+...|++.
T Consensus 151 ~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g------------~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~ 218 (1228)
T KOG0055|consen 151 NFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAG------------GLLARFLSKLTEKEQEAYAKAGSIAEEVIS 218 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999888776665543332 111111111222222333445567889999
Q ss_pred hhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH---HHHHH-HhhcCCCcCHHHHHHHHH
Q 000475 1087 GATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFL---VLIIL-VTLPRSAIDPSLAGLAAT 1162 (1470)
Q Consensus 1087 G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~---~~~~~-~~~~~~~~~~~~~gl~l~ 1162 (1470)
+++|+.+|+-|++..+++.+.++...+...... -|.++-..+...++... ..++. ..+..+..++|.+...+.
T Consensus 219 ~iRTV~af~gq~~e~~ry~~~L~~~~k~gi~~g---~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~ 295 (1228)
T KOG0055|consen 219 SIRTVYAFNGEKKEIERYSKALENALKFGIKKG---LFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFF 295 (1228)
T ss_pred hhhhhhhhcCcHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEe
Confidence 999999999999999999998888766544322 22222222221111111 11111 112233444544332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCC-Ccceeeee
Q 000475 1163 YGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTL-PMVLKGIT 1241 (1470)
Q Consensus 1163 y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~-~~vLk~is 1241 (1470)
+.+.-...+......+..+.+...|..+|.+.++..++.....+..++ .-..+|.|+|+||+|+|+... .++|+|+|
T Consensus 296 ~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~--~~~~~g~ief~nV~FsYPsRpdv~Il~g~s 373 (1228)
T KOG0055|consen 296 SVLIGGMSLGQASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRV--LSSIKGEIEFRNVCFSYPSRPDVKILKGVS 373 (1228)
T ss_pred ehhhhhhhhhccccchHHHhccccchHHHHHHhcCCCCCCcccccCCc--ccccccceEEEEEEecCCCCCcchhhCCeE
Confidence 222222333334445566677778899999988644332111111111 113579999999999996432 27999999
Q ss_pred EEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcCC-C
Q 000475 1242 CTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-Q 1320 (1470)
Q Consensus 1242 ~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~-~ 1320 (1470)
|+|++||.|||||+|||||||++++|.|+|+|++|+|+|||.||.+++.++||++||+|.|||+||++||+||+.... +
T Consensus 374 l~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~d 453 (1228)
T KOG0055|consen 374 LKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPD 453 (1228)
T ss_pred EEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998765 7
Q ss_pred CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHH
Q 000475 1321 HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIR 1400 (1470)
Q Consensus 1321 ~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~ 1400 (1470)
.|++|+.+|++.++.++||.++|+|+||.|||+|..||||||||+||||||+|+|+||+||||||+||+++|+.+|++|+
T Consensus 454 at~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd 533 (1228)
T KOG0055|consen 454 ATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALD 533 (1228)
T ss_pred ccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHHh
Q 000475 1401 EETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLR 1458 (1470)
Q Consensus 1401 ~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~~ 1458 (1470)
+..+|+|.|+|||||+||+++|+|+||++|+|+|.|+|+||++++ |.|++||+-...
T Consensus 534 ~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q~~ 590 (1228)
T KOG0055|consen 534 KASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQGTHDELIALG-GIYSSLVRLQEL 590 (1228)
T ss_pred HhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEecCHHHHHhcc-chHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999986 999999987653
No 26
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=3.5e-70 Score=697.21 Aligned_cols=550 Identities=19% Similarity=0.243 Sum_probs=436.5
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhcccccccc-ccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000475 893 VPVILLCQVLFQALQMGSNYWIAWATDEKRKVS-REQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVF 971 (1470)
Q Consensus 893 ~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~-~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl 971 (1470)
+.+++++.++..++....++++.+..+.-.... ...++..++++.++..+..+...........+...++..+++++++
T Consensus 21 ~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ 100 (588)
T PRK13657 21 GILLAVANVLLAAATFAEPILFGRIIDAISGKGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFERII 100 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455566667777777888776554211111 1111222232223333333333333344445555556669999999
Q ss_pred cCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 000475 972 RAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARC 1051 (1470)
Q Consensus 972 ~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 1051 (1470)
+.|+.+|++.+.|++++|+++|++.+.......+..++..++..++.+++++..+|++.++++.+++++..+.
T Consensus 101 ~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~------- 173 (588)
T PRK13657 101 QLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLIT------- 173 (588)
T ss_pred hCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 9999999999999999999999999988777777777777777777777888888887766655554443333
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHH
Q 000475 1052 HYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINL 1131 (1470)
Q Consensus 1052 ~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~ 1131 (1470)
.++.+..++..+......+...+++.|+++|+.+||+|+.++.+.+++.+..++..+..........+.....++
T Consensus 174 -----~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (588)
T PRK13657 174 -----TLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRA 248 (588)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555566666666677888999999999999999999999999999888888777766555555555444444
Q ss_pred HHHHHHHHHHH-HHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCC
Q 000475 1132 LFNFAFFLVLI-ILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRP 1210 (1470)
Q Consensus 1132 l~~~~~~~~~~-~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~ 1210 (1470)
+..+...++.+ .......+.+++|.+..+..+...+...+..+...+.++.....+.+|+.++.+.+++.+.. ...+
T Consensus 249 ~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~--~~~~ 326 (588)
T PRK13657 249 ASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP--PGAI 326 (588)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC--CCCC
Confidence 43333222222 23334567888998888888888888888888888888888899999999988765442211 1111
Q ss_pred CCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCH
Q 000475 1211 SPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL 1290 (1470)
Q Consensus 1211 ~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l 1290 (1470)
+.. +..+.|+++||+|+|+++ +++|+|+||+++|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++.
T Consensus 327 ~~~-~~~~~I~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~ 404 (588)
T PRK13657 327 DLG-RVKGAVEFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTR 404 (588)
T ss_pred CcC-CCCCeEEEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCH
Confidence 111 234679999999999744 469999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccEEEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1291 QDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1291 ~~LR~~isiIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
+++|++|+|+||||.+|+||||+||... ++.+|++++++++.+++++++.++|+|+||.++++|.+||||||||+||||
T Consensus 405 ~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialAR 484 (588)
T PRK13657 405 ASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIAR 484 (588)
T ss_pred HHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999876 468999999999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChH
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSF 1449 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f 1449 (1470)
||+++|+||+||||||+||++|++.|.+.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ ++.|
T Consensus 485 all~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y 563 (588)
T PRK13657 485 ALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRF 563 (588)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChH
Confidence 999999999999999999999999999999988789999999999999999999999999999999999999975 6899
Q ss_pred HHHHHHHHhh
Q 000475 1450 SKLVAEFLRR 1459 (1470)
Q Consensus 1450 ~~lv~~~~~~ 1459 (1470)
++|+++....
T Consensus 564 ~~l~~~~~~~ 573 (588)
T PRK13657 564 AALLRAQGML 573 (588)
T ss_pred HHHHHHhhcc
Confidence 9999866433
No 27
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.4e-70 Score=693.09 Aligned_cols=506 Identities=20% Similarity=0.249 Sum_probs=405.6
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhccccccccccchhh-h---HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000475 896 ILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIG-V---FIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVF 971 (1470)
Q Consensus 896 ~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~-v---y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl 971 (1470)
.+++.++..++.++.++.+++..+..........+. . .+++.++..++.++..++....+.+...+++.+++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 97 (529)
T TIGR02868 18 AILLGALALGSAVALLGVSAWLISRAAEMPPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRLA 97 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334445555666666666666554211111111111 1 112333445566677777778889999999999999999
Q ss_pred cCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 000475 972 RAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARC 1051 (1470)
Q Consensus 972 ~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 1051 (1470)
+.|.+||++.++|++++|+++|++.++..+...+..++..++.+++.++++++.+|.+.++++..++++.++.
T Consensus 98 ~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~------- 170 (529)
T TIGR02868 98 RLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVA------- 170 (529)
T ss_pred ccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-------
Confidence 9999999999999999999999999999999888888888888889999999999988776654443332221
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHH
Q 000475 1052 HYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINL 1131 (1470)
Q Consensus 1052 ~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~ 1131 (1470)
..++.+..+...+......+.+.+++.|+++|+.+||+|+.|+.+.+++.+..++..+..........+......+
T Consensus 171 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (529)
T TIGR02868 171 ----PLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLL 246 (529)
T ss_pred ----HHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0223333344444445566888999999999999999999999999999998888877766665555554444444
Q ss_pred HHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCC
Q 000475 1132 LFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRP 1210 (1470)
Q Consensus 1132 l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~ 1210 (1470)
+..+...++.++ ......+.++.|.....+.|...+...+..+...+.++.+...+.+|+.++.+.++|.+.. +...+
T Consensus 247 ~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-~~~~~ 325 (529)
T TIGR02868 247 AAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEG-VVPAA 325 (529)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCC-CCCCC
Confidence 443333322222 2233467788888888888888888888888888999999999999999999876653321 11111
Q ss_pred CCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCH
Q 000475 1211 SPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL 1290 (1470)
Q Consensus 1211 ~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l 1290 (1470)
...+|..+.|+|+||+|+|+++. ++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||+|++++ .
T Consensus 326 ~~~~~~~~~I~~~~vsf~Y~~~~-~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~ 403 (529)
T TIGR02868 326 GALGLGKPTLELRDLSFGYPGSP-PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-Q 403 (529)
T ss_pred cccCCCCceEEEEEEEEecCCCC-ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-H
Confidence 12234567899999999997654 599999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHhcccEEEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1291 QDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1291 ~~LR~~isiIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
+++|++++||||||++|+|||||||..+ ++++|+++++|+++++++|++.++|+|+||.+||+|.+||||||||+||||
T Consensus 404 ~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiAR 483 (529)
T TIGR02868 404 DELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALAR 483 (529)
T ss_pred HHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHH
Confidence 9999999999999999999999999985 468999999999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCh
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRI 1415 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl 1415 (1470)
|++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 484 all~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 484 ALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999988999999999995
No 28
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-73 Score=639.39 Aligned_cols=506 Identities=22% Similarity=0.354 Sum_probs=413.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHH
Q 000475 939 GSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSI 1018 (1470)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~ 1018 (1470)
++.++..+|+++......-+.+.+-.++++|+....+.|.-...+|+++.-..+..+.+. .+........-.++.+...
T Consensus 271 gsG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va 349 (790)
T KOG0056|consen 271 GSGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVA 349 (790)
T ss_pred cccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhh
Confidence 346677788888888888899999999999999999999999999988877776666555 3333333333334444333
Q ss_pred HHH-HHHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchH
Q 000475 1019 IIL-MSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQE 1097 (1470)
Q Consensus 1019 ~~v-~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e 1097 (1470)
++. ....+||+.+++..++.++.+..+..+ .+--+..|.+...+.+++ ..-.+++-+.+|+|-|++|
T Consensus 350 ~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iT--------eWRTk~rR~Mn~~~nesr----Ar~vDsllNFETVKyy~Ae 417 (790)
T KOG0056|consen 350 MVYFFIKFNIWFGLIVFLMMLLYCYVTIKIT--------EWRTKARRKMNNSWNESR----ARQVDSLLNFETVKYYNAE 417 (790)
T ss_pred hhhhhhhHhHHHHHHHHHHHHHHhheeeeee--------hhhHHHHHHhhhhhhhhh----hhhhhhhhcchhhhccCch
Confidence 332 233567776666666655554432111 222223333333333333 3446889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH-HHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 1098 NRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLV-LIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIW 1176 (1470)
Q Consensus 1098 ~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~ 1176 (1470)
+...+++.+.++++++..+........+...-+.+..+..... +++++....+..+.|...+..+|.+++-+.++|+-.
T Consensus 418 ~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT 497 (790)
T KOG0056|consen 418 DYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGT 497 (790)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHH
Confidence 9999999999999998877766665555555554444433332 222333346667788888999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCC
Q 000475 1177 NLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRT 1256 (1470)
Q Consensus 1177 ~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrT 1256 (1470)
.+..++++.+-.|++.+..+.++|. .+.+..+|---.+|+|+|+||+|.|+|+.| ||+||||+++||+.||+||||
T Consensus 498 ~YR~iQ~nfiDmEnmfdllkee~eV---vd~P~a~pl~~~~G~i~fsnvtF~Y~p~k~-vl~disF~v~pGktvAlVG~S 573 (790)
T KOG0056|consen 498 YYRSIQKNFIDMENMFDLLKEEPEV---VDLPGAPPLKVTQGKIEFSNVTFAYDPGKP-VLSDISFTVQPGKTVALVGPS 573 (790)
T ss_pred HHHHHHHhhhhHHHHHHHhhcCchh---hcCCCCCCccccCCeEEEEEeEEecCCCCc-eeecceEEecCCcEEEEECCC
Confidence 9999999999999999998755543 222222222335899999999999998865 999999999999999999999
Q ss_pred CCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCc
Q 000475 1257 GSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHL 1335 (1470)
Q Consensus 1257 GSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L 1335 (1470)
|+||||++++|||+++.++|.|.|||+||+.+..+.||+.||+||||.+||+.||..|+... ..++|||+.+|.+.+++
T Consensus 574 GaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~I 653 (790)
T KOG0056|consen 574 GAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQI 653 (790)
T ss_pred CCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999865 46899999999999999
Q ss_pred HHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCh
Q 000475 1336 AEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRI 1415 (1470)
Q Consensus 1336 ~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl 1415 (1470)
+|-|...|+|++|.|||+|-.||||||||+++||++||+|.|++||||||+||..||+.||.++.+..+++|.|+||||+
T Consensus 654 HdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRL 733 (790)
T KOG0056|consen 654 HDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRL 733 (790)
T ss_pred HHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHHhhcc
Q 000475 1416 PTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLRRTS 1461 (1470)
Q Consensus 1416 ~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~~~~~ 1461 (1470)
+||.++|.|+|+++|+|+|.|+|+||+++++|.|++|++......+
T Consensus 734 STivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~qqa~g~ 779 (790)
T KOG0056|consen 734 STIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQAQQAMGK 779 (790)
T ss_pred hheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999999999965554433
No 29
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=6e-70 Score=695.00 Aligned_cols=561 Identities=21% Similarity=0.298 Sum_probs=451.1
Q ss_pred HHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccc---ccccc-ccchhhhHHHhhhHHHHHHHHHHHHHHH
Q 000475 878 TVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDE---KRKVS-REQLIGVFIFLSGGSSFFILGRAVLLAT 953 (1470)
Q Consensus 878 ~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~---~~~~~-~~~~l~vy~~l~~~~~~~~~~~~~~~~~ 953 (1470)
+.++.|++...+.. .+.+++.++..++.++.++.+....+. ..... ...++..++++.+...++.+++.++...
T Consensus 7 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (576)
T TIGR02204 7 AALWPFVRPYRGRV--LAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTW 84 (576)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455655432222 223334455555556666655544332 11111 1122333444444556667778888888
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000475 954 IAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLF 1033 (1470)
Q Consensus 954 ~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 1033 (1470)
.+.+....++..+++++++.|.++|+....|++++|+++|++.++..+...+..++..++.+++.+++++.++|++.+++
T Consensus 85 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (576)
T TIGR02204 85 LGERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLV 164 (576)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888888888888888888888988898877665
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHH
Q 000475 1034 LVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSC 1113 (1470)
Q Consensus 1034 ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~ 1113 (1470)
+..+++.+.+. .++.+..+...+.....+....+++.|.++|+.+||+|+.++.+.+++.+..++..+
T Consensus 165 l~~~~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~ 232 (576)
T TIGR02204 165 LLAVPLVLLPI------------LLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYE 232 (576)
T ss_pred HHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 54433332222 223333444455555666778899999999999999999999999999998888777
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 000475 1114 VTFHNCGTMEWLCLRINLLFNFAFFLVLI-ILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERIL 1192 (1470)
Q Consensus 1114 ~~~~~~~~~~wl~~~l~~l~~~~~~~~~~-~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~ 1192 (1470)
..........|+.....++..+...+..+ .......+.++.|....+..|...+...+..+...+.++.+...+.+|+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~ 312 (576)
T TIGR02204 233 AARQRIRTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLI 312 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666555566555544443332222222 22334567788888888888888889999999999999999999999999
Q ss_pred HHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCC-CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCC
Q 000475 1193 QFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTL-PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV 1271 (1470)
Q Consensus 1193 ~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~-~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~ 1271 (1470)
++.+.++|.+... ...+..+|..+.|+++||+|+|+++. +++|+|+||+|+|||+++|+|+||||||||+++|+|++
T Consensus 313 ~~l~~~~~~~~~~--~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~ 390 (576)
T TIGR02204 313 ELLQAEPDIKAPA--HPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFY 390 (576)
T ss_pred HHhCCCCcCCCCC--CCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhcc
Confidence 9988765532111 11112234457899999999997533 57999999999999999999999999999999999999
Q ss_pred CCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccc
Q 000475 1272 EPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPV 1350 (1470)
Q Consensus 1272 ~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v 1350 (1470)
+|++|+|.+||+|+++++.+++|++++|+||||.+|+||||+||.... +.+|++++++++++++.+++.++|+|+||++
T Consensus 391 ~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i 470 (576)
T TIGR02204 391 DPQSGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYL 470 (576)
T ss_pred CCCCCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCcee
Confidence 999999999999999999999999999999999999999999998754 5789999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCC
Q 000475 1351 AEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEG 1430 (1470)
Q Consensus 1351 ~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G 1430 (1470)
+|+|.+||||||||++||||++++|+||+||||||++|++|++.|.+.|++..+++|+|+||||++.+..||+|++|++|
T Consensus 471 ~~~g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g 550 (576)
T TIGR02204 471 GERGVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQG 550 (576)
T ss_pred CCCCCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred EEEEecChhHHhhcCCChHHHHHHH
Q 000475 1431 KVLEYDSPRQLLEDNSSSFSKLVAE 1455 (1470)
Q Consensus 1431 ~vvE~g~p~~Ll~~~~s~f~~lv~~ 1455 (1470)
+++|.|+|++|++ +++.|++|++.
T Consensus 551 ~~~~~g~~~~l~~-~~~~~~~l~~~ 574 (576)
T TIGR02204 551 RIVAQGTHAELIA-KGGLYARLARL 574 (576)
T ss_pred EEEeeecHHHHHH-cCChHHHHHhh
Confidence 9999999999987 57899998764
No 30
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.1e-68 Score=680.19 Aligned_cols=562 Identities=20% Similarity=0.269 Sum_probs=437.4
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccc-cchhhhHHHhhhHHHHHHHHHHHHHHHHHHHH
Q 000475 880 YSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSR-EQLIGVFIFLSGGSSFFILGRAVLLATIAIKT 958 (1470)
Q Consensus 880 y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~-~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~ 958 (1470)
++.|++...+ .+.+.+++.++..++.++.++.+.+..+.-...+. ..++..++++.+...+..++..........+.
T Consensus 10 l~~~l~~~k~--~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (585)
T TIGR01192 10 ALSYLNVHKN--RVLLIVIANITLAAITIAEPILFGRIIDAISSKSDVLPTLALWAGFGVFNTIAYVLVAREADRLAHGR 87 (585)
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445554322 22334445556666777777776655542111111 11122222222222233333333344455555
Q ss_pred HHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000475 959 AQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILG 1038 (1470)
Q Consensus 959 s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~ 1038 (1470)
..+++.++++++++.|++||++.++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.+.++++.+++
T Consensus 88 ~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~ 167 (585)
T TIGR01192 88 RATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGI 167 (585)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666799999999999999999999999999999999998888777777777788888888888999998877665555
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Q 000475 1039 ISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHN 1118 (1470)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~ 1118 (1470)
++.++. +++.+..++..+......+...+++.|+++|+.+||+|+.++.+.+++.+..++..+..+..
T Consensus 168 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (585)
T TIGR01192 168 LYILIA------------KLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPV 235 (585)
T ss_pred HHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 544433 44445556666666667778899999999999999999999999998888888776665554
Q ss_pred HhHhHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcC
Q 000475 1119 CGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNI 1197 (1470)
Q Consensus 1119 ~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~ 1197 (1470)
.....+......++..+...++.++ ......+.++.|.+..+..|...+...+..+...+.++.....+.+|+.+..+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~ 315 (585)
T TIGR01192 236 LDWWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDS 315 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4333333333333333222222222 233446778888888888888888888888888888888899999999998876
Q ss_pred CCCCccccCCCCCCCCCC-CCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCc
Q 000475 1198 PSEAPLVIKNSRPSPEWP-SSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGG 1276 (1470)
Q Consensus 1198 ~~E~~~~~~~~~~~~~wp-~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G 1276 (1470)
+++.+. ... +..++ ..+.|+++||+|+|+++ .++|+|+||+|++||++||||+||||||||+++|.|+++|++|
T Consensus 316 ~~~~~~---~~~-~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G 390 (585)
T TIGR01192 316 VFQREE---PAD-APELPNVKGAVEFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVG 390 (585)
T ss_pred CccccC---Ccc-CCCCCCCCCeEEEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCC
Confidence 544221 111 11122 34679999999999754 3589999999999999999999999999999999999999999
Q ss_pred EEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCC
Q 000475 1277 RILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGE 1355 (1470)
Q Consensus 1277 ~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~ 1355 (1470)
+|.+||+|+.+++.+++|++++++||||.+|++|+|+||... .+.+|++++++++.+++++++.++|+|+||.++++|.
T Consensus 391 ~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~ 470 (585)
T TIGR01192 391 QILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGN 470 (585)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCC
Confidence 999999999999999999999999999999999999999875 4578999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEe
Q 000475 1356 NWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEY 1435 (1470)
Q Consensus 1356 nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~ 1435 (1470)
+||||||||++|||||+++|+||+||||||+||++|++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.
T Consensus 471 ~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~ 550 (585)
T TIGR01192 471 RLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEK 550 (585)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred cChhHHhhcCCChHHHHHHHHHhhcc
Q 000475 1436 DSPRQLLEDNSSSFSKLVAEFLRRTS 1461 (1470)
Q Consensus 1436 g~p~~Ll~~~~s~f~~lv~~~~~~~~ 1461 (1470)
|+|++|+++ ++.|+++++.+....+
T Consensus 551 g~~~~l~~~-~~~y~~l~~~~~~~~~ 575 (585)
T TIGR01192 551 GSFQELIQK-DGRFYKLLRRSGLLTN 575 (585)
T ss_pred CCHHHHHHC-CChHHHHHHhCccccC
Confidence 999999975 6899999987755444
No 31
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.5e-69 Score=681.41 Aligned_cols=509 Identities=21% Similarity=0.249 Sum_probs=415.0
Q ss_pred hHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHH
Q 000475 932 VFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFA 1011 (1470)
Q Consensus 932 vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~ 1011 (1470)
+++++.++..++.+++.++....+.+...+++.++++++++.|+++|++.++|++++|+++|++.+...+...+..++..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~ 120 (569)
T PRK10789 41 TMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDS 120 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 33344444555566666777788899999999999999999999999999999999999999999987666666666666
Q ss_pred HHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHH
Q 000475 1012 LIQLLSIIILM-SQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATT 1090 (1470)
Q Consensus 1012 ~~~~~~~~~v~-~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~t 1090 (1470)
++..++.++++ +.++|++.++++..+++..++. +.+.+..++..+......+.+.+++.|++.|+.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ 188 (569)
T PRK10789 121 LVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMI------------KRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRM 188 (569)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHH
Confidence 55555555554 4678877665554444333322 2233333333444445567788999999999999
Q ss_pred HHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHH-HHHHhhcCCCcCHHHHHHHHHHHHHHHH
Q 000475 1091 IRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVL-IILVTLPRSAIDPSLAGLAATYGLNLNV 1169 (1470)
Q Consensus 1091 IRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~-~~~~~~~~~~~~~~~~gl~l~y~l~l~~ 1169 (1470)
||+|+.|+++.+++.+..++..+..+.......+..........+...++. +.......+.++.|.+..+..|...+..
T Consensus 189 ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~ 268 (569)
T PRK10789 189 IKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIW 268 (569)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999999888877766665544444433333333222222111 1223344677888888777788888877
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcE
Q 000475 1170 LQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKK 1249 (1470)
Q Consensus 1170 ~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~Gek 1249 (1470)
.+..+...+.++.....+.+|+.++.+.++|.+. ...+.+ +..+.|+++|++|+|+++.+++|+|+||+|+|||+
T Consensus 269 pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~---~~~~~~--~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~ 343 (569)
T PRK10789 269 PMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKD---GSEPVP--EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQM 343 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccC---CCCCCC--CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCE
Confidence 7888888889999999999999999987654321 111111 23568999999999986555799999999999999
Q ss_pred EEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC-CCCCHHHHHH
Q 000475 1250 IGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWE 1328 (1470)
Q Consensus 1250 vgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~ 1328 (1470)
+||||+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++++++||+|.+|+||+|+||... .+++|+++++
T Consensus 344 ~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~ 423 (569)
T PRK10789 344 LGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEH 423 (569)
T ss_pred EEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999876 4689999999
Q ss_pred HHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEE
Q 000475 1329 VINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTV 1408 (1470)
Q Consensus 1329 aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TV 1408 (1470)
+++.+++++++.++|+|+||.++++|.+||||||||++||||++++|+||+||||||+||+++++.|++.|++..+++|+
T Consensus 424 ~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~ti 503 (569)
T PRK10789 424 VARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTV 503 (569)
T ss_pred HHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred EEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHHh
Q 000475 1409 ITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLR 1458 (1470)
Q Consensus 1409 I~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~~ 1458 (1470)
|+||||++++..||+|++|++|+++|.|+|++|+++ ++.|++|++....
T Consensus 504 i~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 504 IISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred EEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 999999999999999999999999999999999975 5899999876543
No 32
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=2.5e-68 Score=672.71 Aligned_cols=514 Identities=21% Similarity=0.264 Sum_probs=414.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcccc--cccc---ccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000475 897 LLCQVLFQALQMGSNYWIAWATDEK--RKVS---REQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVF 971 (1470)
Q Consensus 897 ~l~~~~~~~~~~~~~~wl~~~~~~~--~~~~---~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl 971 (1470)
+++.++..++....++.+.+..+.- +... ...++..+++++++..++.+++.++....+.+...+++.+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~ 88 (529)
T TIGR02857 9 GLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVA 88 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555666666666555321 1111 1123344455556667778888888899999999999999999999
Q ss_pred cCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 000475 972 RAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARC 1051 (1470)
Q Consensus 972 ~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 1051 (1470)
+.|..+|++.++|++++|+++|++.++..+...+..++..++.+++.+++++..+|.+.++++..+++..++.
T Consensus 89 ~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~------- 161 (529)
T TIGR02857 89 ALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFM------- 161 (529)
T ss_pred hCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-------
Confidence 9999999999999999999999999999888888888888888888888888889887665544433322221
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHH
Q 000475 1052 HYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINL 1131 (1470)
Q Consensus 1052 ~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~ 1131 (1470)
.++.+..+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..++..+..........+.....++
T Consensus 162 -----~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (529)
T TIGR02857 162 -----ILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLEL 236 (529)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112222223333333445567889999999999999999999999999988888777766666556666555555
Q ss_pred HHHHHHHHHH-HHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCC
Q 000475 1132 LFNFAFFLVL-IILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRP 1210 (1470)
Q Consensus 1132 l~~~~~~~~~-~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~ 1210 (1470)
+..+...++. +.......+.++.|....+..|...+...+..+...+..+.....+.+|+.++.+.+++... . .
T Consensus 237 ~~~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~----~-~ 311 (529)
T TIGR02857 237 FATLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG----K-A 311 (529)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC----C-c
Confidence 5544333222 22222236677888777777777777777888888899999999999999999975543211 1 1
Q ss_pred CCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCH
Q 000475 1211 SPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL 1290 (1470)
Q Consensus 1211 ~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l 1290 (1470)
+...+..+.|+++||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++.
T Consensus 312 ~~~~~~~~~i~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~ 391 (529)
T TIGR02857 312 PVTAAPAPSLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADA 391 (529)
T ss_pred CCCCCCCCeEEEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCH
Confidence 11122346899999999997655579999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccEEEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1291 QDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1291 ~~LR~~isiIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
+++|++++||||||.+|+|||||||... .+.+|+++++++++++++++++++|+||||.++|+|.+||||||||++|||
T Consensus 392 ~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laR 471 (529)
T TIGR02857 392 DSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALAR 471 (529)
T ss_pred HHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHH
Confidence 9999999999999999999999999875 467999999999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEE
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVL 1427 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL 1427 (1470)
|++++|+|++||||||+||++|++.|++.|++..+++|+|+||||++++..||+|+||
T Consensus 472 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 472 AFLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999999999999999988899999999999999999999986
No 33
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.8e-68 Score=621.38 Aligned_cols=510 Identities=23% Similarity=0.339 Sum_probs=391.0
Q ss_pred cchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHH
Q 000475 927 EQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLA 1006 (1470)
Q Consensus 927 ~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~ 1006 (1470)
...+..|.+..+++.+|..++.+.+++...++-+....+.+.+.+...+++|.+..+|.+.+....-...+...+.-.+.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~ 153 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVF 153 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHH
Confidence 35677899999999999999999999999999999999999999999999999999998877766666666555555444
Q ss_pred HHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhh
Q 000475 1007 GLAFALIQLLSIIILM-SQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESI 1085 (1470)
Q Consensus 1007 ~~~~~~~~~~~~~~v~-~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl 1085 (1470)
.++..++.+......+ .-..+.+.++++..++.|..+.+..+ ++=-+--++..+.+ ....+..-|++
T Consensus 154 ~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t--------~~Rn~fR~~~N~Ad----n~as~~~~dsL 221 (591)
T KOG0057|consen 154 NIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVT--------RWRNRFRKAMNNAD----NSASRRAYDSL 221 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeeh--------hHHHHHHHHHHhhh----hHHHHHHHHHH
Confidence 4444444433332222 12233333333333333322221111 11111122333333 33445677999
Q ss_pred hhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHH-HhhcCCCcCHHHHHHHHHHH
Q 000475 1086 AGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIIL-VTLPRSAIDPSLAGLAATYG 1164 (1470)
Q Consensus 1086 ~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~gl~l~y~ 1164 (1470)
.+..+||+|+.|++..+++...+.++.+......+....+.+.-..+++.....+.+.. --...+..+.+..-+.-+..
T Consensus 222 ~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~ 301 (591)
T KOG0057|consen 222 INYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLL 301 (591)
T ss_pred hhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHH
Confidence 99999999999999999999999888877666555544444444444433322222221 11123344555555556666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEe
Q 000475 1165 LNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTF 1244 (1470)
Q Consensus 1165 l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i 1244 (1470)
.++...+..+-..+.++-..+.-.+-.....+. +. ...+. +++--+..|.|+|+||++.|.|+ ++||+|+||+|
T Consensus 302 ~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~--~~--~i~~~-~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I 375 (591)
T KOG0057|consen 302 FQLSLPLNFLGSVYRELRQALTDMRTLFILLEV--DE--DIQEA-ALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTI 375 (591)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhh--hh--hhhhc-cCCcccCCCcEEEEeeEEEeCCC-CceecceeEEe
Confidence 677777777777777776666555444333211 11 01111 11222345779999999999876 45999999999
Q ss_pred eCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcCC-CCCH
Q 000475 1245 PGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSD 1323 (1470)
Q Consensus 1245 ~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~-~~sd 1323 (1470)
++||||||||++||||||++++|+|+++ .+|+|+|||+||+++.++.+|+-||+||||..||++||-+|+-..+ ..+|
T Consensus 376 ~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~ 454 (591)
T KOG0057|consen 376 PKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASD 454 (591)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCH
Confidence 9999999999999999999999999999 9999999999999999999999999999999999999999998764 6899
Q ss_pred HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc
Q 000475 1324 QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET 1403 (1470)
Q Consensus 1324 ~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~ 1403 (1470)
||+.+++++++++|.+.++|+|++|.|||+|..||||||||++||||+||+|+|+++|||||+||.+||+.|.+.|....
T Consensus 455 eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~ 534 (591)
T KOG0057|consen 455 EEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVM 534 (591)
T ss_pred HHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHH
Q 000475 1404 SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEF 1456 (1470)
Q Consensus 1404 ~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~ 1456 (1470)
+++|+|+|+||++++++||+|++||+|+|+|+|+|+||++ +++.|+.++...
T Consensus 535 ~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~ 586 (591)
T KOG0057|consen 535 SGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQ 586 (591)
T ss_pred CCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccc
Confidence 9999999999999999999999999999999999999998 788887776543
No 34
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=8.4e-67 Score=666.98 Aligned_cols=538 Identities=19% Similarity=0.246 Sum_probs=421.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 266 PQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRI 345 (1470)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~ 345 (1470)
++...+.+++.+++..++.++..++..+.|+++..+++.+..+.. .... .+.+++++++..++..++.....+...+.
T Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (588)
T PRK11174 13 LKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENI-PREA-LLPPFILLILLFVLRALLAWLRERVGFKA 90 (588)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445567788888889999999999999999999999997642211 1111 22334444555556666666666777789
Q ss_pred HHHHHHHHHHHHHHHhcccccCC---CCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 000475 346 GIRVRSALTVLIYKRSMAIKFAG---PSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAA 421 (1470)
Q Consensus 346 g~rir~~L~~~iy~K~L~ls~~~---~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~ 421 (1470)
+.++...+...+|+|.++++... .++|+++|.+++|++++.+++. .+..++...+.+++++++++ .++|..+++.
T Consensus 91 ~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~l~l~~ 169 (588)
T PRK11174 91 GQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVF-PINWAAGLIL 169 (588)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 99999999999999999987543 3899999999999999998864 45566666555555554444 3454555656
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHH----HHHHHHHHHHHHHHHH
Q 000475 422 LFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLL----RLREIERDSLKKYLYT 497 (1470)
Q Consensus 422 l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~----~~R~~E~~~l~~~~~~ 497 (1470)
++++++...+...+.++.++..++.++..+++.+.+.|.++|+++||.|+||+.+.+++. +.|+.+.+..+.....
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK11174 170 LGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLS 249 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666677788888999999999999999999999999999999999998888774 4444554444433333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 498 CSAIAFLFWASPTLVSVITFGVCILLKTPLT---------SGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQE 568 (1470)
Q Consensus 498 ~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~---------~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~ 568 (1470)
..+..++... +. +.++.++.+.+. +.++ +..++.++.+...+..|+..++..+..+.++++|.+||.+
T Consensus 250 ~~~~~~~~~~-~~-~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ 326 (588)
T PRK11174 250 SAVLEFFASI-SI-ALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVT 326 (588)
T ss_pred HHHHHHHHHH-HH-HHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322222211 11 122233333333 3333 3445565667778889999999999999999999999999
Q ss_pred HhcccCCCCCCCCCC-CCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCC
Q 000475 569 FIKEDNQKKPITEPT-SKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGE 646 (1470)
Q Consensus 569 fL~~~e~~~~~~~~~-~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~ 646 (1470)
+++.++.++.....+ .......|+++|++|.|+++ .+.|+| ||++++|+++||+|+||||||||+++|+|+
T Consensus 327 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~~-------~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~ 399 (588)
T PRK11174 327 FLETPLAHPQQGEKELASNDPVTIEAEDLEILSPDG-------KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGF 399 (588)
T ss_pred HHcCCCcccCCCccccCCCCCceEEEEeeEEeccCC-------CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 998765221111111 11123469999999877633 468999 999999999999999999999999999999
Q ss_pred CcCCCCcEEEECC-------------EeEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcc
Q 000475 647 IPRISGAAIKVHG-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLS 712 (1470)
Q Consensus 647 ~~~~~G~~i~~~g-------------~~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t 712 (1470)
+ |++|++ .++| .++||||+|++|++||+|||.+|++ .++++++++++.|+++++++.+|+|++|
T Consensus 400 ~-p~~G~I-~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT 477 (588)
T PRK11174 400 L-PYQGSL-KINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDT 477 (588)
T ss_pred C-CCCcEE-EECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccccc
Confidence 9 899986 8887 4799999999999999999999965 7899999999999999999999999999
Q ss_pred cccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEE
Q 000475 713 VVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVM 792 (1470)
Q Consensus 713 ~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l 792 (1470)
.+||+|.+|||||||||+||||+++||+|+||||||||||+++++++.+ .+....+++|+|+|||+++.+..||+|++|
T Consensus 478 ~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~-~l~~~~~~~TvIiItHrl~~i~~aD~Iivl 556 (588)
T PRK11174 478 PIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQ-ALNAASRRQTTLMVTHQLEDLAQWDQIWVM 556 (588)
T ss_pred ccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHH-HHHHHhCCCEEEEEecChHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999999976 566677899999999999999999999999
Q ss_pred eCCEEEEecChhhHHhhchhHHHHHHHH
Q 000475 793 KDGKIEQSGKYEDLIADQNSELVRQMKA 820 (1470)
Q Consensus 793 ~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 820 (1470)
++|+|+++|+++|+++ .+..+.++...
T Consensus 557 ~~G~i~e~G~~~eL~~-~~~~y~~l~~~ 583 (588)
T PRK11174 557 QDGQIVQQGDYAELSQ-AGGLFATLLAH 583 (588)
T ss_pred eCCeEeecCCHHHHHh-cchHHHHHHHH
Confidence 9999999999999997 55566665543
No 35
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.5e-66 Score=621.63 Aligned_cols=545 Identities=23% Similarity=0.312 Sum_probs=433.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 267 QVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSG-KHDHSS-YHYGLVLASVFLFAKTVESLTQRQWYFGANR 344 (1470)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~-~~~~~~-~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r 344 (1470)
+.+.+..|+.+..+.++.++.......-|.++.++++.+.. .+.... .+....++++.+...+...+-...+.+...|
T Consensus 139 ~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~r 218 (716)
T KOG0058|consen 139 LGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAGER 218 (716)
T ss_pred HHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455678888888888999888888899999999998876 222011 1213333333333333333333444455566
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCCHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 000475 345 IGIRVRSALTVLIYKRSMAIKFAGPSSGIIINMINVDVERIGDFF-LYIHRIWLLPVQVFLALVILYKNLGAAPAFAALF 423 (1470)
Q Consensus 345 ~g~rir~~L~~~iy~K~L~ls~~~~~~G~ivnlms~D~~~i~~~~-~~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~ 423 (1470)
+..|+|..+...+-+.-... .+...+|+++|+++.|++.+.+.+ .++.+..-..+|.+.++.+++. +.|..+++.++
T Consensus 219 v~~rlR~~lF~sil~QdiaF-FD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~-~S~~Ltlv~~i 296 (716)
T KOG0058|consen 219 VVARLRTDLFRSLLRQDIAF-FDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFS-LSWRLTLVTLI 296 (716)
T ss_pred HHHHHHHHHHHHHHhhhhhh-hccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh-hhHHHHHHHHH
Confidence 66666666655554444332 233479999999999999998776 4677777777888877776663 44466777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 424 STIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAF 503 (1470)
Q Consensus 424 ~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~ 503 (1470)
.+.+++.+...+++..++.-++..++..+-.+...|.|++||+||.|+-|+.-.++..+.=+.-.+.-+|-.....+...
T Consensus 297 ~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~ 376 (716)
T KOG0058|consen 297 VVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFG 376 (716)
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHh
Confidence 77788888889999999999999999999999999999999999999999865554443322222222222222222111
Q ss_pred H--HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC-C
Q 000475 504 L--FWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPI-T 580 (1470)
Q Consensus 504 ~--~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~-~ 580 (1470)
. +......++++.+|.+++.++.+|++...+++.+-..+..++..+...++.++++..+.+|+.+|++.+++-+.. .
T Consensus 377 ~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G~ 456 (716)
T KOG0058|consen 377 STNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLTGT 456 (716)
T ss_pred HHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCCc
Confidence 1 112234567788899999999999999999999999999999999999999999999999999999987732221 1
Q ss_pred CCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC
Q 000475 581 EPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG 659 (1470)
Q Consensus 581 ~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g 659 (1470)
..|. .-...|+|+|++|+||.+ ++.++++| ||+|+|||.||+|||+||||||+.++|+..|+|++|++ .++|
T Consensus 457 ~~p~-~~~G~IeF~~VsFaYP~R-----p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~I-llDG 529 (716)
T KOG0058|consen 457 LAPD-HLQGVIEFEDVSFAYPTR-----PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRI-LLDG 529 (716)
T ss_pred cccc-cccceEEEEEeeeecCCC-----CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeE-EECC
Confidence 1222 345689999999999988 67889999 99999999999999999999999999999999999997 8887
Q ss_pred -------------EeEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 660 -------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 660 -------------~~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
+||+|.|+|.+|++||+|||.+|.+ .++++.+++.+.+..++.+..+|+|++|.+||+|..|||||
T Consensus 530 ~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQ 609 (716)
T KOG0058|consen 530 VPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQ 609 (716)
T ss_pred eehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchH
Confidence 3799999999999999999999986 45677888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhh
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYED 805 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~ 805 (1470)
||||||||||++||.|+||||.|||||+++ +++.++.+....+++|||+|.|+++.++.||+|+++++|++++.|+++|
T Consensus 610 KQRIAIARALlr~P~VLILDEATSALDaeS-E~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~e 688 (716)
T KOG0058|consen 610 KQRIAIARALLRNPRVLILDEATSALDAES-EYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDE 688 (716)
T ss_pred HHHHHHHHHHhcCCCEEEEechhhhcchhh-HHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHH
Confidence 999999999999999999999999999997 5666788888888999999999999999999999999999999999999
Q ss_pred HHhhchhHHHHHHHHh
Q 000475 806 LIADQNSELVRQMKAH 821 (1470)
Q Consensus 806 l~~~~~~~~~~~~~~~ 821 (1470)
+++..+..+.++++.+
T Consensus 689 Ll~~~~gly~~Lv~~q 704 (716)
T KOG0058|consen 689 LLSKPNGLYAKLVQRQ 704 (716)
T ss_pred HhhCcccHHHHHHHHh
Confidence 9996656777777654
No 36
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=6.1e-66 Score=651.85 Aligned_cols=523 Identities=17% Similarity=0.156 Sum_probs=408.9
Q ss_pred HHHHHHHHHHHhhhhHHHHHhccccc-cccc---cchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000475 897 LLCQVLFQALQMGSNYWIAWATDEKR-KVSR---EQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFR 972 (1470)
Q Consensus 897 ~l~~~~~~~~~~~~~~wl~~~~~~~~-~~~~---~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ 972 (1470)
+++.++..++.+..++.+....+.-. ..+. ..++.+++++.++..++.+++.++....+.+...+++.++++++++
T Consensus 12 ~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~ 91 (544)
T TIGR01842 12 GLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASFS 91 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444555566666666665543111 1111 1223334444455667777888888899999999999999999999
Q ss_pred CCcccccccChhhHHHHHhhchhhhhcchHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 000475 973 APISFFDSTPSSRILNRCSTDQSTVDTDIPY-RLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARC 1051 (1470)
Q Consensus 973 ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~-~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 1051 (1470)
.|+.. .|...+++++|++.+...+.. .+..++..++.++ .+++++..+|++.++++..+++.+.+.
T Consensus 92 ~~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~i~------- 158 (544)
T TIGR01842 92 ATLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVGLA------- 158 (544)
T ss_pred CcccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHH-------
Confidence 99842 366789999999999887665 3444444444433 345677888887655443333222221
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHH
Q 000475 1052 HYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINL 1131 (1470)
Q Consensus 1052 ~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~ 1131 (1470)
.++.+..+...+......+...+++.|+++|+.+||+|+.++.+.+++.+..++..+..+.......+......+
T Consensus 159 -----~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (544)
T TIGR01842 159 -----LLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKY 233 (544)
T ss_pred -----HHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112222233333444556677889999999999999999999999999888888766665544444433333333
Q ss_pred HHHHHHHHHH-HHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCC
Q 000475 1132 LFNFAFFLVL-IILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRP 1210 (1470)
Q Consensus 1132 l~~~~~~~~~-~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~ 1210 (1470)
+..+...++. +.......+.+++|.+..+..+...+...+..+...+.++.....+.+|+.++.+.++|.+. ....
T Consensus 234 ~~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~---~~~~ 310 (544)
T TIGR01842 234 FRIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP---AMPL 310 (544)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC---CCCC
Confidence 3332222222 22233456788999888888888888888999999999999999999999999987655321 1111
Q ss_pred CCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCH
Q 000475 1211 SPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL 1290 (1470)
Q Consensus 1211 ~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l 1290 (1470)
+ +..+.|+++|++|+|+++.+++|+|+||+++|||++||||+||||||||+++|+|+++|++|+|.+||+|+.+++.
T Consensus 311 ~---~~~~~i~~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~ 387 (544)
T TIGR01842 311 P---EPEGHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDR 387 (544)
T ss_pred C---CCCCeEEEEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCH
Confidence 1 2346899999999997655579999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccEEEccCCCCCcccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1291 QDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1291 ~~LR~~isiIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
+.+|++++++||||.+|++|+|+|+..++ +++|++++++++.++++++++++|+|+||.++|+|.+||||||||++|||
T Consensus 388 ~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lAR 467 (544)
T TIGR01842 388 ETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALAR 467 (544)
T ss_pred HHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHH
Confidence 99999999999999999999999998654 48999999999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhh
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
|++++|+|||||||||+||++|++.|.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|++|++
T Consensus 468 all~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 468 ALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred HHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999999999999999875 6899999999999999999999999999999999999985
No 37
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-68 Score=600.28 Aligned_cols=487 Identities=22% Similarity=0.393 Sum_probs=406.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChh---hHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHH-HH
Q 000475 948 AVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSS---RILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIIL-MS 1023 (1470)
Q Consensus 948 ~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G---~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v-~~ 1023 (1470)
..++...+..+-+.+-.+.|.++....+.|.-+..+| |.+.|=++-++.+ +-..+...+-.++.+....++ ..
T Consensus 3 ~~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i---~~~~l~~i~P~~~Ei~l~~vi~~~ 79 (497)
T COG5265 3 DRLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETI---LRWILFNILPTLVEISLVAVILWR 79 (497)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHH---HHHHHHHhhHHHHHHHHHHHHHHh
Confidence 3455666777777888888999999999998877666 4555555554444 334444444444544433333 34
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHH
Q 000475 1024 QAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLR 1103 (1470)
Q Consensus 1024 ~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~ 1103 (1470)
.++|++..+.+..+.++.++.+... .+-....|+++. +-+...+.-.+++-..+|++.|+.|+.+..+
T Consensus 80 ~~~~~f~~~t~vtv~lY~~ftv~~s--------~wr~~~rr~~n~----aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r 147 (497)
T COG5265 80 VYGWWFALTTLVTVILYLLFTVIVS--------DWRTDFRRLMNN----ADSDANAKAIDSLLNFETVKYFGNEEYEAVR 147 (497)
T ss_pred hcccHHHHHHHHHHHHHHHhheeeh--------hhhHHHHHhhhh----hhhHHHHHHHHHHhhhhheeecCchhhhhhh
Confidence 5788888888777777766552211 222333344444 4445556677899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 1104 SHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVE 1182 (1470)
Q Consensus 1104 ~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le 1182 (1470)
+.+.++.+.++......+..||++.-..+........... ..-+..+..+.|...+.-.+..++..+++.+-..+.++.
T Consensus 148 ~~~~~~~Y~~a~~k~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~ 227 (497)
T COG5265 148 YDHALETYEKAAIKVHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIR 227 (497)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHH
Confidence 9999999999999888888888887776665544333222 223456678888888889999999999999999999999
Q ss_pred HhhhHHHHHHHHhcCCCCCccccCCCCCCCCCC-CCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHH
Q 000475 1183 NKMISVERILQFTNIPSEAPLVIKNSRPSPEWP-SSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKS 1261 (1470)
Q Consensus 1183 ~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp-~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKS 1261 (1470)
+.....|+..+..+.+.|.. +....++-|| ..|.|.|+||+|.|.+..| +|+|+||++++|+++||||++|+|||
T Consensus 228 q~ltdme~mfdLl~~~~~v~---d~pda~~L~~~~~g~v~F~~V~F~y~~~r~-iL~~isf~i~~g~tvAiVg~SG~gKs 303 (497)
T COG5265 228 QALTDMEKMFDLLDVEAEVS---DAPDAPPLWPVRLGAVAFINVSFAYDPRRP-ILNGISFTIPLGKTVAIVGESGAGKS 303 (497)
T ss_pred HhhhhHHHHHHhhccchhhc---cCCCCccccccccceEEEEEEEeeccccch-hhcCccccccCccEEEEEeCCCCcHH
Confidence 99999999999888766643 2334455674 4688999999999998765 99999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHH
Q 000475 1262 TLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVR 1340 (1470)
Q Consensus 1262 TLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~ 1340 (1470)
|+..+|+|+|++++|.|.|||+||..+..+.||+.||+||||.+||+.|+..|+... ...|++|+++|++.++++++++
T Consensus 304 TI~rllfRFyD~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~ 383 (497)
T COG5265 304 TILRLLFRFYDVNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQ 383 (497)
T ss_pred HHHHHHHHHhCCcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHH
Confidence 999999999999999999999999999999999999999999999999999999875 4689999999999999999999
Q ss_pred hcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh
Q 000475 1341 QDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID 1420 (1470)
Q Consensus 1341 ~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~ 1420 (1470)
.+|+|+||.|||.|-.||||||||+++||++|++|+||+||||||+||..||+.||.+|++..+++|.++||||++||.+
T Consensus 384 ~lP~gy~t~VgerglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~ 463 (497)
T COG5265 384 SLPEGYDTGVGERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIID 463 (497)
T ss_pred hCchhhhcccchheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCEEEEecChhHHhhcCCChHHHHHH
Q 000475 1421 NDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVA 1454 (1470)
Q Consensus 1421 ~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~ 1454 (1470)
+|.|+||++|+|+|.|+|++|+++ +|.|++|+.
T Consensus 464 adeiivl~~g~i~erg~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 464 ADEIIVLDNGRIVERGTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred CceEEEeeCCEEEecCcHHHHHHc-CChHHHHhc
Confidence 999999999999999999999986 899998874
No 38
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.8e-66 Score=704.92 Aligned_cols=513 Identities=18% Similarity=0.234 Sum_probs=413.1
Q ss_pred hhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHH
Q 000475 929 LIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGL 1008 (1470)
Q Consensus 929 ~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~ 1008 (1470)
+...+++++++..++.+++.++....+.+...+++.++++++++.|++|||..+.|++.+|++.|+..+...+...+..+
T Consensus 99 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~ 178 (1466)
T PTZ00265 99 IIFSLVLIGIFQFILSFISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITI 178 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666777788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhh
Q 000475 1009 AFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGA 1088 (1470)
Q Consensus 1009 ~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~ 1088 (1470)
+..++.+++.++++++.+|.+.++++.++++.+.+. .++.+..+...+......+...+.+.|++.|+
T Consensus 179 ~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi 246 (1466)
T PTZ00265 179 FTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICG------------VICNKKVKINKKTSLLYNNNTMSIIEEALVGI 246 (1466)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh
Confidence 999999999999999999998877665555443332 22222233334444444567788999999999
Q ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHH-HhhcC--------CCcCHHHHHH
Q 000475 1089 TTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIIL-VTLPR--------SAIDPSLAGL 1159 (1470)
Q Consensus 1089 ~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~-~~~~~--------~~~~~~~~gl 1159 (1470)
.+||+|+.|+++.+++.+..+.+.+..+.......+......++..+..+++.++. ..... +.++++.+..
T Consensus 247 ~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~ 326 (1466)
T PTZ00265 247 RTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVIS 326 (1466)
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHH
Confidence 99999999999999999888877766655444443333333333222222222211 11112 1234443332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCC-CCccee
Q 000475 1160 AATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLK 1238 (1470)
Q Consensus 1160 ~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vLk 1238 (1470)
.+.+.+.....+..+...+..+.....|.+|+.+..+.+++.+.. .+ ....|..+.|+|+||+|+|+.. ..++|+
T Consensus 327 ~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~-~~---~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~ 402 (1466)
T PTZ00265 327 ILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRKPLVENN-DD---GKKLKDIKKIQFKNVRFHYDTRKDVEIYK 402 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC-CC---CccCCCCCcEEEEEEEEEcCCCCCCceec
Confidence 222323222333445566788889999999999999876553211 11 1112334589999999999743 236999
Q ss_pred eeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE-cCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCc
Q 000475 1239 GITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILI-DGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDP 1317 (1470)
Q Consensus 1239 ~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~I-DG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp 1317 (1470)
|+||+|++||++||||+||||||||+++|.|+++|++|+|.+ ||.|+++++.+++|++|++|||+|.||++||++||..
T Consensus 403 ~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~ 482 (1466)
T PTZ00265 403 DLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKY 482 (1466)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHh
Confidence 999999999999999999999999999999999999999999 5799999999999999999999999999999999975
Q ss_pred CC----------------------------------------------------------CCCHHHHHHHHHHcCcHHHH
Q 000475 1318 LE----------------------------------------------------------QHSDQEIWEVINKCHLAEIV 1339 (1470)
Q Consensus 1318 ~~----------------------------------------------------------~~sd~eI~~aL~~~~L~~~v 1339 (1470)
.. ..+|+++++|++++++++++
T Consensus 483 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i 562 (1466)
T PTZ00265 483 SLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFV 562 (1466)
T ss_pred cCCCccccchhccccccccccccccccccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHH
Confidence 21 35789999999999999999
Q ss_pred HhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhh
Q 000475 1340 RQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPT 1417 (1470)
Q Consensus 1340 ~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~t 1417 (1470)
.++|+|+||.++++|.+||||||||++|||||+++|+|||||||||+||++++..|++.|++.. +++|+|+||||+++
T Consensus 563 ~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~ 642 (1466)
T PTZ00265 563 SALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLST 642 (1466)
T ss_pred HhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999875 48999999999999
Q ss_pred hhhcCEEEEEeCC-----------------------------------------------EEEEecChhHHhhcCCChHH
Q 000475 1418 VIDNDLVLVLDEG-----------------------------------------------KVLEYDSPRQLLEDNSSSFS 1450 (1470)
Q Consensus 1418 i~~~DrIlvL~~G-----------------------------------------------~vvE~g~p~~Ll~~~~s~f~ 1450 (1470)
+..||+|+||++| +|+|+|+|+||+++++|.|+
T Consensus 643 i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~ 722 (1466)
T PTZ00265 643 IRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYY 722 (1466)
T ss_pred HHhCCEEEEEeCCccccccccccccccccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHH
Confidence 9999999999986 59999999999987789999
Q ss_pred HHHHHHH
Q 000475 1451 KLVAEFL 1457 (1470)
Q Consensus 1451 ~lv~~~~ 1457 (1470)
.|++...
T Consensus 723 ~l~~~q~ 729 (1466)
T PTZ00265 723 TMINNQK 729 (1466)
T ss_pred HHHhhhc
Confidence 9996653
No 39
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.1e-67 Score=626.74 Aligned_cols=465 Identities=25% Similarity=0.392 Sum_probs=356.2
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCC----CCcEEEECC-----
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRI----SGAAIKVHG----- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~----~G~~i~~~g----- 659 (1470)
.++++|.+.+|.... .....++| ||++.+||++||+|++||||||+.++|.|.+++. +|++ .++|
T Consensus 5 lL~V~nL~v~~~~~~----~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I-~~~g~dl~~ 79 (539)
T COG1123 5 LLEVENLTVEFATDG----GRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEV-ILDGRDLLG 79 (539)
T ss_pred eEEEeceEEEEecCC----cceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEE-EECCcchhc
Confidence 588999998887541 22467889 9999999999999999999999999999999876 7886 5655
Q ss_pred ------------EeEEEcCCCC-CCC--ccHHHHHhc----CCCC-CHHH---HHHHHHHhcchHHHHhccCCCcccccC
Q 000475 660 ------------KKAYVPQSSW-IQT--GTIRENILF----GKDM-RQSF---YEEVLEGCALNQDIEMWADGDLSVVGE 716 (1470)
Q Consensus 660 ------------~~ayv~Q~~~-i~~--~Ti~eNI~~----g~~~-~~~~---y~~v~~~~~l~~d~~~l~~g~~t~ig~ 716 (1470)
.+||++|+|+ .+| .||.+-|.- .... .++. ..+.++..++.+.... +.
T Consensus 80 l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~ 150 (539)
T COG1123 80 LSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DR 150 (539)
T ss_pred CCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------cc
Confidence 3699999986 233 577776653 2212 1222 2233444444332221 45
Q ss_pred CCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEe
Q 000475 717 RGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMK 793 (1470)
Q Consensus 717 ~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~ 793 (1470)
..+.|||||||||.||+||..+|+++|+||||+|||+.+..+|.+. ++.+. .|.++|+||||++.+.+ ||+|+||+
T Consensus 151 yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~l-lk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~ 229 (539)
T COG1123 151 YPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDL-LKDLQRELGMAVLFITHDLGVVAELADRVVVMY 229 (539)
T ss_pred CCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHH-HHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEE
Confidence 7889999999999999999999999999999999999999999864 54443 48899999999999876 99999999
Q ss_pred CCEEEEecChhhHHhhchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCccchhhcC
Q 000475 794 DGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELG 873 (1470)
Q Consensus 794 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g 873 (1470)
+|++++.|+.++++.+....+...+-
T Consensus 230 ~G~iVE~G~~~~i~~~p~hpYT~~Ll------------------------------------------------------ 255 (539)
T COG1123 230 KGEIVETGPTEEILSNPQHPYTRGLL------------------------------------------------------ 255 (539)
T ss_pred CCEEEEecCHHHHHhccCCcccHHHH------------------------------------------------------
Confidence 99999999999988622111000000
Q ss_pred cchHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHHHH
Q 000475 874 RVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLAT 953 (1470)
Q Consensus 874 ~v~~~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~ 953 (1470)
. ..|.....
T Consensus 256 -----------~----------------------------------a~p~~~~~-------------------------- 264 (539)
T COG1123 256 -----------A----------------------------------AVPRLGDE-------------------------- 264 (539)
T ss_pred -----------h----------------------------------hCCCcccc--------------------------
Confidence 0 00000000
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000475 954 IAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLF 1033 (1470)
Q Consensus 954 ~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 1033 (1470)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHH
Q 000475 1034 LVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSC 1113 (1470)
Q Consensus 1034 ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~ 1113 (1470)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 000475 1114 VTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQ 1193 (1470)
Q Consensus 1114 ~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~ 1193 (1470)
. +
T Consensus 265 -----------------------------------~----------------------------------------~--- 266 (539)
T COG1123 265 -----------------------------------K----------------------------------------I--- 266 (539)
T ss_pred -----------------------------------c----------------------------------------c---
Confidence 0 0
Q ss_pred HhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCC---------CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHH
Q 000475 1194 FTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNP---------TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLI 1264 (1470)
Q Consensus 1194 ~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~---------~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl 1264 (1470)
...+.+. +. +...-++++|++.+|.. +...+++||||++++||.+||||.||||||||.
T Consensus 267 -~~~~~~~--------~~---~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTla 334 (539)
T COG1123 267 -IRLPRRG--------PL---RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLA 334 (539)
T ss_pred -ccccccc--------cc---ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHH
Confidence 0000000 00 01235789999999973 124689999999999999999999999999999
Q ss_pred HHHhcCCCCCCcEEEEcCEe--CCCCCHHHHhcccEEEccCCCCC---cccHHHhcC-cCCC---C----CHHHHHHHHH
Q 000475 1265 QALFRVVEPSGGRILIDGVD--ISMIGLQDLRSRLSIIPQDPMLF---QGTVRTNLD-PLEQ---H----SDQEIWEVIN 1331 (1470)
Q Consensus 1265 ~~L~rl~~p~~G~I~IDG~d--I~~i~l~~LR~~isiIpQdp~LF---~gTIR~NLd-p~~~---~----sd~eI~~aL~ 1331 (1470)
++|+|+++|++|+|.++|.| .+.-....+|+++-+|.|||+-. ..||+++|. |... . ..+.+-+.|+
T Consensus 335 r~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~ 414 (539)
T COG1123 335 RILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLE 414 (539)
T ss_pred HHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHH
Confidence 99999999999999999977 33233556888999999999632 459999985 4321 1 2234777799
Q ss_pred HcCcHH-HHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEE
Q 000475 1332 KCHLAE-IVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTV 1408 (1470)
Q Consensus 1332 ~~~L~~-~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TV 1408 (1470)
+++|.+ +..+.| ..||||||||+||||||..+|++||+|||||+||+-+.+.|.+.|.+.. -+.|.
T Consensus 415 ~VgL~~~~l~ryP-----------~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~ 483 (539)
T COG1123 415 LVGLPPEFLDRYP-----------HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTY 483 (539)
T ss_pred HcCCCHHHHhcCc-----------hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEE
Confidence 998875 333333 4599999999999999999999999999999999999999999988754 36999
Q ss_pred EEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHH
Q 000475 1409 ITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAE 1455 (1470)
Q Consensus 1409 I~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~ 1455 (1470)
|+|||++..+.. ||||+||++|+|||.|+.++..+++...|.+...+
T Consensus 484 lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 484 LFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred EEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHH
Confidence 999999999987 99999999999999999999999988888766544
No 40
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.6e-64 Score=634.47 Aligned_cols=542 Identities=23% Similarity=0.275 Sum_probs=449.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 263 TSLPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGA 342 (1470)
Q Consensus 263 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~ 342 (1470)
.+-++..++-+|+.+.-..+..++..++.++.|++.+.++|.+-...+ ...-+++++++.+..+++.+....-.|..
T Consensus 142 ~~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~---~~tL~vl~ig~~~~~l~~~~l~~lr~~~~ 218 (709)
T COG2274 142 LSWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS---RSTLTVLAIGLLLAALFEALLRLLRTYLI 218 (709)
T ss_pred hHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556667778888888888888899999999999999998765443 22234566677777777777766666778
Q ss_pred HHHHHHHHHHHHHHHHHHhccccc---CCCCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhHHH
Q 000475 343 NRIGIRVRSALTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFLYI-HRIWLLPVQVFLALVILYKNLGAAPA 418 (1470)
Q Consensus 343 ~r~g~rir~~L~~~iy~K~L~ls~---~~~~~G~ivnlms~D~~~i~~~~~~~-~~~w~~pl~i~~~~~lL~~~lG~~~~ 418 (1470)
..++.|+...+...+|++.++++. ..+++|+++++++ |.++|.+++..- .....-.+-.++.+++++..=+ ..+
T Consensus 219 ~~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~-~L~ 296 (709)
T COG2274 219 AHLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSW-KLT 296 (709)
T ss_pred HHHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 889999999999999999999975 3469999999998 999999997532 2222222222333334443334 888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 419 FAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTC 498 (1470)
Q Consensus 419 l~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~ 498 (1470)
+++++.+++.+.+..++.+..++..++.++...++.+...|.++||++||..+-|+.+..++++.-.+..+.-.+.....
T Consensus 297 li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~ 376 (709)
T COG2274 297 LIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLA 376 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 88888888888999999999999999999999999999999999999999999999999999888666666544444443
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000475 499 SAIAFLFWAS--PTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQK 576 (1470)
Q Consensus 499 ~~~~~~~~~~--p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~ 576 (1470)
.......... -.-+.+++||++.++++.+|.|.++++.++...+..|+..+.+....+.+++++.+|+.+.++.|.+.
T Consensus 377 ~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~ 456 (709)
T COG2274 377 LILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQ 456 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 3333222222 22355688999999999999999999999999999999999999999999999999999999987632
Q ss_pred CCCC-CCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcE
Q 000475 577 KPIT-EPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAA 654 (1470)
Q Consensus 577 ~~~~-~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~ 654 (1470)
+... ....+..+..|+++|++|+|+.+ +.+.|+| |++|++||++||+|+||||||||+|+|+|.++|.+|++
T Consensus 457 ~~~~~~~~~~~~~g~I~~~nvsf~y~~~------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I 530 (709)
T COG2274 457 EGDKTLIHLPKLQGEIEFENVSFRYGPD------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRI 530 (709)
T ss_pred ccccccccccccCceEEEEEEEEEeCCC------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE
Confidence 2211 12223345679999999999876 3478999 99999999999999999999999999999999999996
Q ss_pred EEECC-------------EeEEEcCCCCCCCccHHHHHhcCCCCCH-HHHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 655 IKVHG-------------KKAYVPQSSWIQTGTIRENILFGKDMRQ-SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 655 i~~~g-------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~-~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
.++| .++||+|++.+|+|||+|||.+|.|... +...++++..+.++++..+|.|.+|.+||+|.+
T Consensus 531 -~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~ 609 (709)
T COG2274 531 -LLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGAN 609 (709)
T ss_pred -EECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCC
Confidence 8887 3799999999999999999999998654 666667777788999999999999999999999
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEe
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQS 800 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~ 800 (1470)
||||||||++||||++++|+|++|||||||||+++++.+.++ +.....++|+|+|||+++.+..||+|+||++|+|+++
T Consensus 610 LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~-L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~ 688 (709)
T COG2274 610 LSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQN-LLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQ 688 (709)
T ss_pred CCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHH-HHHHhcCCeEEEEEccchHhhhccEEEEccCCceecc
Confidence 999999999999999999999999999999999999988876 5556778999999999999999999999999999999
Q ss_pred cChhhHHhhchhHHHHHH
Q 000475 801 GKYEDLIADQNSELVRQM 818 (1470)
Q Consensus 801 g~~~~l~~~~~~~~~~~~ 818 (1470)
|+++|+++ .++.+.++.
T Consensus 689 gs~~ell~-~~g~y~~l~ 705 (709)
T COG2274 689 GSHEELLA-QGGLYARLY 705 (709)
T ss_pred CCHHHHHH-hcChHHHHH
Confidence 99999998 455555554
No 41
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-66 Score=662.70 Aligned_cols=484 Identities=22% Similarity=0.356 Sum_probs=354.6
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1470)
..++++|++++|.... ...+.+++ ||++++||+++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 11 ~~l~v~~l~~~y~~~~----~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i-~~~g~~~~~~~~ 85 (623)
T PRK10261 11 DVLAVENLNIAFMQEQ----QKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLV-QCDKMLLRRRSR 85 (623)
T ss_pred ceEEEeceEEEecCCC----CceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEE-EECCEEeccccc
Confidence 4689999999996421 12467889 99999999999999999999999999999999999986 4432
Q ss_pred -------------------EeEEEcCCC--CCC-CccHHHHHhcCCC----CCH----HHHHHHHHHhcchHHHHhccCC
Q 000475 660 -------------------KKAYVPQSS--WIQ-TGTIRENILFGKD----MRQ----SFYEEVLEGCALNQDIEMWADG 709 (1470)
Q Consensus 660 -------------------~~ayv~Q~~--~i~-~~Ti~eNI~~g~~----~~~----~~y~~v~~~~~l~~d~~~l~~g 709 (1470)
.+|||+|+| -++ ..||+|||.++.. .+. ++..++++..++.+.
T Consensus 86 ~~~~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~------- 158 (623)
T PRK10261 86 QVIELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEA------- 158 (623)
T ss_pred cccccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh-------
Confidence 479999998 344 4699999998632 121 223334444443210
Q ss_pred CcccccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhhh-c
Q 000475 710 DLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-A 786 (1470)
Q Consensus 710 ~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~ 786 (1470)
.........+|||||||||+|||||+.+|+++||||||++||+.+...+.+ +++.+. + |+|||+||||++++.. |
T Consensus 159 -~~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~-ll~~l~~~~g~tvi~itHdl~~~~~~a 236 (623)
T PRK10261 159 -QTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQ-LIKVLQKEMSMGVIFITHDMGVVAEIA 236 (623)
T ss_pred -hhHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHH-HHHHHHHhcCCEEEEEcCCHHHHHHhC
Confidence 112456778999999999999999999999999999999999999888876 455443 3 7899999999999865 9
Q ss_pred CEEEEEeCCEEEEecChhhHHhhchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCc
Q 000475 787 DLVLVMKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQ 866 (1470)
Q Consensus 787 d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 866 (1470)
|+|++|++|++++.|+++++.......+...
T Consensus 237 dri~vl~~G~i~~~g~~~~~~~~~~~~~~~~------------------------------------------------- 267 (623)
T PRK10261 237 DRVLVMYQGEAVETGSVEQIFHAPQHPYTRA------------------------------------------------- 267 (623)
T ss_pred CEEEEeeCCeecccCCHHHhhcCCCChhhhh-------------------------------------------------
Confidence 9999999999999998877653110000000
Q ss_pred cchhhcCcchHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHH
Q 000475 867 DEDTELGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILG 946 (1470)
Q Consensus 867 ~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~ 946 (1470)
++.. .+...
T Consensus 268 ----------------l~~~----------------------------------~~~~~--------------------- 276 (623)
T PRK10261 268 ----------------LLAA----------------------------------VPQLG--------------------- 276 (623)
T ss_pred ----------------hhhc----------------------------------cCccc---------------------
Confidence 0000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000475 947 RAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAA 1026 (1470)
Q Consensus 947 ~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~ 1026 (1470)
.+ .|+ ..+.
T Consensus 277 ---------------------------~~-------~~~--------------~~~~----------------------- 285 (623)
T PRK10261 277 ---------------------------AM-------KGL--------------DYPR----------------------- 285 (623)
T ss_pred ---------------------------cc-------ccc--------------cCCc-----------------------
Confidence 00 000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHH
Q 000475 1027 WQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHS 1106 (1470)
Q Consensus 1027 ~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~ 1106 (1470)
+. |
T Consensus 286 ------------------------------~~-----------------~------------------------------ 288 (623)
T PRK10261 286 ------------------------------RF-----------------P------------------------------ 288 (623)
T ss_pred ------------------------------cc-----------------c------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000475 1107 LIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMI 1186 (1470)
Q Consensus 1107 ~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~ 1186 (1470)
. ..
T Consensus 289 ------------------------------------------~--~~--------------------------------- 291 (623)
T PRK10261 289 ------------------------------------------L--IS--------------------------------- 291 (623)
T ss_pred ------------------------------------------c--cc---------------------------------
Confidence 0 00
Q ss_pred HHHHHHHHhcCCC-CCccccCCCCCCCCCCCCCcEEEEeEEEEeCCC---------CCcceeeeeEEeeCCcEEEEECCC
Q 000475 1187 SVERILQFTNIPS-EAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT---------LPMVLKGITCTFPGEKKIGVVGRT 1256 (1470)
Q Consensus 1187 sveRi~~~~~~~~-E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~---------~~~vLk~is~~i~~GekvgIVGrT 1256 (1470)
...+. +.+..... ..+ +...-++++|++++|+.. ...+|+||||+|++||++||+|+|
T Consensus 292 --------~~~~~~~~~~~~~~-~~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~n 359 (623)
T PRK10261 292 --------LEHPAKQEPPIEQD-TVV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGES 359 (623)
T ss_pred --------cccccccCcccccc-ccc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCC
Confidence 00000 00000000 000 011248999999999621 135999999999999999999999
Q ss_pred CCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHH---HHhcccEEEccCC--CCCcc-cHHHhcCc-C---CCCC----
Q 000475 1257 GSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ---DLRSRLSIIPQDP--MLFQG-TVRTNLDP-L---EQHS---- 1322 (1470)
Q Consensus 1257 GSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR~~isiIpQdp--~LF~g-TIR~NLdp-~---~~~s---- 1322 (1470)
|||||||+++|.|+.+|++|+|.++|.++...+.. .+|++|+||||+| .++.. |+++|+.. . +..+
T Consensus 360 GsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~ 439 (623)
T PRK10261 360 GSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAA 439 (623)
T ss_pred CCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999999999999999999999877643 4678999999998 36654 99999852 1 1111
Q ss_pred HHHHHHHHHHcCcH-HHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHH
Q 000475 1323 DQEIWEVINKCHLA-EIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIRE 1401 (1470)
Q Consensus 1323 d~eI~~aL~~~~L~-~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~ 1401 (1470)
++++.+.|+.+++. +.. +..+ ..||||||||++|||||+.+|++|||||||++||..+.+.|.+.|++
T Consensus 440 ~~~~~~~L~~~gL~~~~~-------~~~~----~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~ 508 (623)
T PRK10261 440 AARVAWLLERVGLLPEHA-------WRYP----HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLD 508 (623)
T ss_pred HHHHHHHHHHcCCCHHHh-------hCCc----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 24567788888874 332 2333 46999999999999999999999999999999999999999999987
Q ss_pred hc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHHH-HHH
Q 000475 1402 ET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFSK-LVA 1454 (1470)
Q Consensus 1402 ~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~-lv~ 1454 (1470)
.. .+.|||+|||+++.+.. ||||++|++|+|+|.|+++++++++...|.+ ++.
T Consensus 509 l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~ 565 (623)
T PRK10261 509 LQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMA 565 (623)
T ss_pred HHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHh
Confidence 54 37899999999999976 9999999999999999999999876665644 443
No 42
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2e-63 Score=645.44 Aligned_cols=537 Identities=20% Similarity=0.234 Sum_probs=431.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 265 LPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANR 344 (1470)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r 344 (1470)
+++..++.+++.++...++.++..++.++.|++++.+++.+-.... ...-+.+++++++..++..++.....+...+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (686)
T TIGR03797 126 LLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD---RSLLVQIALALLAAAVGAAAFQLAQSLAVLR 202 (686)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566778888888888999999999999999999997753322 1112334445555555566666656667788
Q ss_pred HHHHHHHHHHHHHHHHhccccc---CCCCHHHHHHHHHHhHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHH
Q 000475 345 IGIRVRSALTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFLYI-HR-IWLLPVQVFLALVILYKNLGAAPAF 419 (1470)
Q Consensus 345 ~g~rir~~L~~~iy~K~L~ls~---~~~~~G~ivnlms~D~~~i~~~~~~~-~~-~w~~pl~i~~~~~lL~~~lG~~~~l 419 (1470)
++.++...+...+|+|.++++. ..+++|+++|.++ |++.+.+++... .. +...++ +++++++++.. +|+.++
T Consensus 203 ~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~-~~~l~l 279 (686)
T TIGR03797 203 LETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIF-ALLNLGLMFYY-SWKLAL 279 (686)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-HHHHHH
Confidence 9999999999999999999864 3459999999997 899998876432 22 333333 33344444433 336667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 420 AALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCS 499 (1470)
Q Consensus 420 ~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~ 499 (1470)
+.++++++..++...+.+...+..++.++..+++.+...|.++|+++||.++.|+.+.++.++..++..+...+......
T Consensus 280 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (686)
T TIGR03797 280 VAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIEN 359 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777788888989999999999999999999999999999999999999888887765544444333333333
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 000475 500 AIAFLFWASP--TLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKK 577 (1470)
Q Consensus 500 ~~~~~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~ 577 (1470)
....+..... ..+.++.++++.+.++.+|.|.++++..++..+..|+..++..+..+.+++++++|+.++++.+++.+
T Consensus 360 ~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 439 (686)
T TIGR03797 360 LLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVD 439 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 3222222222 12334566777778899999999999999999999999999999999999999999999998754222
Q ss_pred CCCCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEE
Q 000475 578 PITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIK 656 (1470)
Q Consensus 578 ~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~ 656 (1470)
.... ........|+++|++|+|+++ ..+.|+| ||++++||++||+|+||||||||+++|+|+++|++|++ .
T Consensus 440 ~~~~-~~~~~~~~I~~~nvsf~Y~~~------~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I-~ 511 (686)
T TIGR03797 440 EAKT-DPGKLSGAIEVDRVTFRYRPD------GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSV-F 511 (686)
T ss_pred cCcC-CCCCCCceEEEEEEEEEcCCC------CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEE-E
Confidence 1111 111123469999999999753 3568999 99999999999999999999999999999999999996 8
Q ss_pred ECC-------------EeEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCch
Q 000475 657 VHG-------------KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1470)
Q Consensus 657 ~~g-------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 723 (1470)
++| .++||||+|++|++||+|||.+|++.++++..++++.|+++++++.+|+|.+|.+||+|.+|||
T Consensus 512 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSG 591 (686)
T TIGR03797 512 YDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSG 591 (686)
T ss_pred ECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCH
Confidence 887 3699999999999999999999998888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecCh
Q 000475 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKY 803 (1470)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~ 803 (1470)
|||||++||||++++|+|++||||||+||+++++++.+.+ +.. ++|+|+|||+++.++.||+|++|++|+|++.|++
T Consensus 592 GQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L-~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~ 668 (686)
T TIGR03797 592 GQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESL-ERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTY 668 (686)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999998764 433 6899999999999999999999999999999999
Q ss_pred hhHHhhchhHHHHHHH
Q 000475 804 EDLIADQNSELVRQMK 819 (1470)
Q Consensus 804 ~~l~~~~~~~~~~~~~ 819 (1470)
+|+++ ++..+.++..
T Consensus 669 ~~Ll~-~~~~y~~l~~ 683 (686)
T TIGR03797 669 DELMA-REGLFAQLAR 683 (686)
T ss_pred HHHHh-CCcHHHHHHH
Confidence 99987 5566665543
No 43
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.1e-63 Score=650.69 Aligned_cols=535 Identities=16% Similarity=0.211 Sum_probs=436.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 267 QVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIG 346 (1470)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g 346 (1470)
+..++.+++.++...+..++..++..+.|++++.+++.+..... ... .+.++++++++.++..++.....+...+++
T Consensus 146 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~--~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (710)
T TIGR03796 146 WRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR--QDW-LRPLLLGMGLTALLQGVLTWLQLYYLRRLQ 222 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455667777788888888889999999999999997654332 111 233444555555566666666667788899
Q ss_pred HHHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 000475 347 IRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAAL 422 (1470)
Q Consensus 347 ~rir~~L~~~iy~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l 422 (1470)
.++...+...+|+|.++++.. .+++|+++|.++.| +.+.+++. .+..+....+.+++.+++++. ++|+.+++.+
T Consensus 223 ~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~li~l 300 (710)
T TIGR03796 223 IKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLL-YDPVLTLIGI 300 (710)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 999999999999999998653 45999999999988 67887764 344455555555555555554 3446777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 423 FSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIA 502 (1470)
Q Consensus 423 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~ 502 (1470)
+.+++.+.+...+.+...+..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++...++.+...+.....+...
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (710)
T TIGR03796 301 AFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILG 380 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777888888889999999999999999999999999999999999999999999887777766555444443332
Q ss_pred HHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 000475 503 FLFWASP--TLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPIT 580 (1470)
Q Consensus 503 ~~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~ 580 (1470)
.+..... ..+.+++++++.+.++.++.|.+++++.++..+..|+..++..+..+.+++++++|+.++++.+++.+...
T Consensus 381 ~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~ 460 (710)
T TIGR03796 381 VLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEE 460 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence 2222211 22345667888888999999999999999999999999999999999999999999999998765221111
Q ss_pred ------CCCC-CCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCC
Q 000475 581 ------EPTS-KASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISG 652 (1470)
Q Consensus 581 ------~~~~-~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G 652 (1470)
.... ......|+++|++|+|+++ ..+.|+| ||++++||+++|+|+||||||||+++|+|+++|++|
T Consensus 461 ~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~------~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G 534 (710)
T TIGR03796 461 EEAPAAGSEPSPRLSGYVELRNITFGYSPL------EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSG 534 (710)
T ss_pred ccccccccccCCCCCCeEEEEEEEEecCCC------CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 0111 1223579999999999854 3568999 999999999999999999999999999999999999
Q ss_pred cEEEECC-------------EeEEEcCCCCCCCccHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhccCCCcccccCCC
Q 000475 653 AAIKVHG-------------KKAYVPQSSWIQTGTIRENILFGK-DMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERG 718 (1470)
Q Consensus 653 ~~i~~~g-------------~~ayv~Q~~~i~~~Ti~eNI~~g~-~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g 718 (1470)
++ .++| .++||||+|++|++||+|||.++. +.+++++.++++.++++++++.+|+|.+|.+||+|
T Consensus 535 ~I-~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G 613 (710)
T TIGR03796 535 EI-LFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGG 613 (710)
T ss_pred EE-EECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCC
Confidence 86 7876 479999999999999999999886 47888999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEE
Q 000475 719 INLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIE 798 (1470)
Q Consensus 719 ~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~ 798 (1470)
.+|||||||||+||||++++|+|+||||||||||+++++++++.+.+ .++|+|+|||+++.+..||+|++|++|+|+
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~ 690 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVV 690 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999876543 489999999999999999999999999999
Q ss_pred EecChhhHHhhchhHHHHH
Q 000475 799 QSGKYEDLIADQNSELVRQ 817 (1470)
Q Consensus 799 ~~g~~~~l~~~~~~~~~~~ 817 (1470)
+.|+++|+++ .+..+.++
T Consensus 691 ~~G~~~~Ll~-~~~~y~~l 708 (710)
T TIGR03796 691 QRGTHEELWA-VGGAYARL 708 (710)
T ss_pred EecCHHHHHH-cCCcHHHH
Confidence 9999999987 44445443
No 44
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.5e-63 Score=645.44 Aligned_cols=530 Identities=22% Similarity=0.319 Sum_probs=433.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 265 LPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANR 344 (1470)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r 344 (1470)
.++..++.+++.+....++.++..++.++.|++++.+++.+-.... ... .+.+++++++..++..++.....+...+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~--~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (694)
T TIGR03375 137 WFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA--FET-LWVLAIGVALAIVFDFVLKTLRSYFLDV 213 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc--HhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667788888888888888899999999999999997653322 111 2333444444445555555555566778
Q ss_pred HHHHHHHHHHHHHHHHhcccccC--CCCHHHHHHHHHHhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000475 345 IGIRVRSALTVLIYKRSMAIKFA--GPSSGIIINMINVDVERIGDFFLYI--HRIWLLPVQVFLALVILYKNLGAAPAFA 420 (1470)
Q Consensus 345 ~g~rir~~L~~~iy~K~L~ls~~--~~~~G~ivnlms~D~~~i~~~~~~~--~~~w~~pl~i~~~~~lL~~~lG~~~~l~ 420 (1470)
++.++...+...+|+|.++++.. .+++|++++.+ +|++.+.+++... ..+...+. +++.+++++. +.|+.+++
T Consensus 214 ~~~~~~~~l~~~~~~~ll~l~~~~~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~-~~~~l~li 290 (694)
T TIGR03375 214 AGKKADLILSAKLFERVLGLRMEARPASVGSFANQL-REFESVRDFFTSATLTALIDLPF-ALLFLLVIAI-IGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHH-HHHHHHHHHH-HHhHHHHH
Confidence 89999999999999999988654 34899999999 7999999886532 22333333 3333344443 34467777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 421 ALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSA 500 (1470)
Q Consensus 421 ~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~ 500 (1470)
.++++++.+++...+.++.++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++..++..+...+.......
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777888888999999999999999999999999999999999999999999999988877766665555544443
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 000475 501 IAFLFWASP--TLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKP 578 (1470)
Q Consensus 501 ~~~~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~ 578 (1470)
...+..... ..+.++++|++.+.++.++.|.+++++.++..+..|+..++..+..+.+++++++|+.++++.+++.+.
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 332222222 223355678888888999999999999999999999999999999999999999999999987652211
Q ss_pred CCC-CCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEE
Q 000475 579 ITE-PTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIK 656 (1470)
Q Consensus 579 ~~~-~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~ 656 (1470)
... .........|+++|++|+|+++ ..+.|+| ||++++||+++|+|+||||||||+++|+|+++|++|++ .
T Consensus 451 ~~~~~~~~~~~~~I~~~~vsf~Y~~~------~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I-~ 523 (694)
T TIGR03375 451 GTRFLHRPRLQGEIEFRNVSFAYPGQ------ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSV-L 523 (694)
T ss_pred CCCCCCCCCccceEEEEEEEEEeCCC------CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-E
Confidence 111 1111223469999999999753 3568999 99999999999999999999999999999999999996 7
Q ss_pred ECC-------------EeEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCc
Q 000475 657 VHG-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1470)
Q Consensus 657 ~~g-------------~~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LS 722 (1470)
++| .++||||+|++|++||+|||.++.+ .+++++.++++.++++++++.+|+|.+|.+||+|.+||
T Consensus 524 idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LS 603 (694)
T TIGR03375 524 LDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLS 603 (694)
T ss_pred ECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCC
Confidence 877 4799999999999999999999986 78899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecC
Q 000475 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGK 802 (1470)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~ 802 (1470)
||||||++||||++++|++++||||||+||+++++++.+. +....+++|+|+|||+++.+..||+|++|++|++++.|+
T Consensus 604 gGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~-l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~ 682 (694)
T TIGR03375 604 GGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDR-LKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGP 682 (694)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCC
Confidence 9999999999999999999999999999999999988764 566667899999999999999999999999999999999
Q ss_pred hhhHHh
Q 000475 803 YEDLIA 808 (1470)
Q Consensus 803 ~~~l~~ 808 (1470)
++|+++
T Consensus 683 ~~eLl~ 688 (694)
T TIGR03375 683 KDQVLE 688 (694)
T ss_pred HHHHHH
Confidence 999876
No 45
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3.2e-63 Score=643.08 Aligned_cols=525 Identities=19% Similarity=0.263 Sum_probs=406.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 270 IHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYG-LVLASVFLFAKTVESLTQRQWYFGANRIGIR 348 (1470)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g-~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~r 348 (1470)
++.+|+.++...++.++..++..+.|+++..+++.+....+....... ++++++.++..++..+....+.+ .+.+
T Consensus 156 ~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~ 231 (711)
T TIGR00958 156 SGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNY----TMAR 231 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH
Confidence 445667788888888999999999999999999988643320111101 11121112222222222222333 4444
Q ss_pred HHHHHHHHHHHHhccccc---CCCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 000475 349 VRSALTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFS 424 (1470)
Q Consensus 349 ir~~L~~~iy~K~L~ls~---~~~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~ 424 (1470)
+...+...+|+|.++.+. ....+|+++|.++.|++.+.+.+. .+..++...+++++++++++. ++|..+++.++.
T Consensus 232 ~~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~-~s~~l~l~~l~~ 310 (711)
T TIGR00958 232 INLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLW-LSPRLTMVTLIN 310 (711)
T ss_pred HHHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHH
Confidence 444555566677766543 344899999999999999988764 455566666666666666554 444666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 425 TIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFL 504 (1470)
Q Consensus 425 ~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~ 504 (1470)
+++...+...+.++.++..++.++..++..+...|.++|+++||.|++|+.+.++.++..++-.+..++.....+....+
T Consensus 311 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (711)
T TIGR00958 311 LPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWT 390 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666777888888888888999999999999999999999999999999877777665443333222222222211111
Q ss_pred HH--HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 000475 505 FW--ASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEP 582 (1470)
Q Consensus 505 ~~--~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~ 582 (1470)
.. .....+.++.++.+.+..+.++.+.+++++.+...+..|+..++..+..+.+++++.+|+.++++.+++.+.....
T Consensus 391 ~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~ 470 (711)
T TIGR00958 391 TSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGTL 470 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 11 1112234456777778889999999999999999999999999999999999999999999999876532211111
Q ss_pred CCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--
Q 000475 583 TSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-- 659 (1470)
Q Consensus 583 ~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-- 659 (1470)
...+....|+++|++|+|+++ ++.+.|+| ||++++||+++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 471 ~~~~~~~~I~~~nVsf~Y~~~-----~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I-~idg~~ 544 (711)
T TIGR00958 471 APLNLEGLIEFQDVSFSYPNR-----PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQV-LLDGVP 544 (711)
T ss_pred CCCCCCCeEEEEEEEEECCCC-----CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEE-EECCEE
Confidence 111223469999999999854 23578999 99999999999999999999999999999999999996 8887
Q ss_pred -----------EeEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHH
Q 000475 660 -----------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQ 727 (1470)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 727 (1470)
.++||+|+|++|++||||||.+|.+ .++++..++++.++++++++.+|+|.+|.+||+|.+|||||||
T Consensus 545 i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQ 624 (711)
T TIGR00958 545 LVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQ 624 (711)
T ss_pred HHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHH
Confidence 4799999999999999999999965 5678899999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHH
Q 000475 728 RIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLI 807 (1470)
Q Consensus 728 Rv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 807 (1470)
|++||||++++|+|++||||||+||+++++.+.+ ....+++|+|+|||+++.+..||+|++|++|+|++.|+++|++
T Consensus 625 RlalARALl~~p~ILILDEpTSaLD~~te~~i~~---~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~ 701 (711)
T TIGR00958 625 RIAIARALVRKPRVLILDEATSALDAECEQLLQE---SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLM 701 (711)
T ss_pred HHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH---hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHH
Confidence 9999999999999999999999999999888876 2234689999999999999999999999999999999999998
Q ss_pred h
Q 000475 808 A 808 (1470)
Q Consensus 808 ~ 808 (1470)
+
T Consensus 702 ~ 702 (711)
T TIGR00958 702 E 702 (711)
T ss_pred h
Confidence 7
No 46
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2e-65 Score=644.53 Aligned_cols=452 Identities=26% Similarity=0.405 Sum_probs=344.2
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcC-----CCCcEEEECC----
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG---- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g---- 659 (1470)
.++++|++++|+... ...+.+++ ||++++||+++|+||||||||||+++|+|.++| ++|++ .++|
T Consensus 5 ~l~~~~l~~~~~~~~----~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i-~~~g~~i~ 79 (529)
T PRK15134 5 LLAIENLSVAFRQQQ----TVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDI-RFHGESLL 79 (529)
T ss_pred eEEEeceEEEecCCC----CceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEE-EECCEecc
Confidence 489999999996320 12467899 999999999999999999999999999999986 68986 5543
Q ss_pred -------------EeEEEcCCCC--CC-CccHHHHHhcCC----CCC----HHHHHHHHHHhcchHHHHhccCCCccccc
Q 000475 660 -------------KKAYVPQSSW--IQ-TGTIRENILFGK----DMR----QSFYEEVLEGCALNQDIEMWADGDLSVVG 715 (1470)
Q Consensus 660 -------------~~ayv~Q~~~--i~-~~Ti~eNI~~g~----~~~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig 715 (1470)
.++|++|+|. ++ ..|+++|+.++. ..+ .++.+++++.+++.+.. ....
T Consensus 80 ~~~~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~ 151 (529)
T PRK15134 80 HASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLT 151 (529)
T ss_pred cCCHHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHh
Confidence 4799999974 33 469999987431 111 12334445555543210 0124
Q ss_pred CCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEE
Q 000475 716 ERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVM 792 (1470)
Q Consensus 716 ~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l 792 (1470)
.+..+|||||||||+|||||+.+|+++||||||++||+.+...+.+ ++..+. .++|||+|||+++++.. ||+|++|
T Consensus 152 ~~~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l 230 (529)
T PRK15134 152 DYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQ-LLRELQQELNMGLLFITHNLSIVRKLADRVAVM 230 (529)
T ss_pred hCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHH-HHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEE
Confidence 5678999999999999999999999999999999999999888876 454432 37999999999999875 9999999
Q ss_pred eCCEEEEecChhhHHhhchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCccchhhc
Q 000475 793 KDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTEL 872 (1470)
Q Consensus 793 ~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 872 (1470)
++|++++.|+++++..... ..
T Consensus 231 ~~G~i~~~g~~~~~~~~~~-------------------------------------~~---------------------- 251 (529)
T PRK15134 231 QNGRCVEQNRAATLFSAPT-------------------------------------HP---------------------- 251 (529)
T ss_pred ECCEEEEeCCHHHHhhCCC-------------------------------------CH----------------------
Confidence 9999998887765532000 00
Q ss_pred CcchHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHHH
Q 000475 873 GRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLA 952 (1470)
Q Consensus 873 g~v~~~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~ 952 (1470)
+..
T Consensus 252 ----------~~~------------------------------------------------------------------- 254 (529)
T PRK15134 252 ----------YTQ------------------------------------------------------------------- 254 (529)
T ss_pred ----------HHH-------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000475 953 TIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPL 1032 (1470)
Q Consensus 953 ~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1032 (1470)
T Consensus 255 -------------------------------------------------------------------------------- 254 (529)
T PRK15134 255 -------------------------------------------------------------------------------- 254 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHH
Q 000475 1033 FLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYS 1112 (1470)
Q Consensus 1033 ~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~ 1112 (1470)
.++ . .
T Consensus 255 ------------------------~~~-~---------~----------------------------------------- 259 (529)
T PRK15134 255 ------------------------KLL-N---------S----------------------------------------- 259 (529)
T ss_pred ------------------------HHH-H---------h-----------------------------------------
Confidence 000 0 0
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 000475 1113 CVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERIL 1192 (1470)
Q Consensus 1113 ~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~ 1192 (1470)
.+ +
T Consensus 260 ----------------------------------~~-----------------------------------------~-- 262 (529)
T PRK15134 260 ----------------------------------EP-----------------------------------------S-- 262 (529)
T ss_pred ----------------------------------Cc-----------------------------------------c--
Confidence 00 0
Q ss_pred HHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCC---------CCCcceeeeeEEeeCCcEEEEECCCCCCHHHH
Q 000475 1193 QFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNP---------TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTL 1263 (1470)
Q Consensus 1193 ~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~---------~~~~vLk~is~~i~~GekvgIVGrTGSGKSTL 1263 (1470)
.++..+ ++ +....|+++|++++|+. +...+|+|+||+|++||++||+|+||||||||
T Consensus 263 ----~~~~~~-------~~---~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTL 328 (529)
T PRK15134 263 ----GDPVPL-------PE---PASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTT 328 (529)
T ss_pred ----cccccc-------CC---CCCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHH
Confidence 000000 00 00114899999999952 12469999999999999999999999999999
Q ss_pred HHHHhcCCCCCCcEEEEcCEeCCCCCHHH---HhcccEEEccCC--CCCcc-cHHHhcCcC---C--CCC----HHHHHH
Q 000475 1264 IQALFRVVEPSGGRILIDGVDISMIGLQD---LRSRLSIIPQDP--MLFQG-TVRTNLDPL---E--QHS----DQEIWE 1328 (1470)
Q Consensus 1264 l~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR~~isiIpQdp--~LF~g-TIR~NLdp~---~--~~s----d~eI~~ 1328 (1470)
+++|.|++ |++|+|.+||.++...+..+ +|++++|+||+| .+|.. |+++|+... . ..+ ++++.+
T Consensus 329 lk~l~Gl~-~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~ 407 (529)
T PRK15134 329 GLALLRLI-NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIA 407 (529)
T ss_pred HHHHhCcC-CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHH
Confidence 99999998 58999999999998776544 478899999998 36654 999999631 1 111 234667
Q ss_pred HHHHcCcH-HHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CC
Q 000475 1329 VINKCHLA-EIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SR 1405 (1470)
Q Consensus 1329 aL~~~~L~-~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~ 1405 (1470)
+++..++. +.. +.++ .+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .+
T Consensus 408 ~l~~~~l~~~~~-------~~~~----~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~ 476 (529)
T PRK15134 408 VMEEVGLDPETR-------HRYP----AEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQ 476 (529)
T ss_pred HHHHcCCCHHHH-------hcCC----ccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhC
Confidence 77777774 222 2233 4699999999999999999999999999999999999999999999764 37
Q ss_pred cEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChH
Q 000475 1406 CTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSF 1449 (1470)
Q Consensus 1406 ~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f 1449 (1470)
+|||+|+|+++.+.. ||+|++|++|++++.|+++++++++...|
T Consensus 477 ~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 521 (529)
T PRK15134 477 LAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAAPQQEY 521 (529)
T ss_pred CEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcCCCChH
Confidence 899999999999876 99999999999999999999987654333
No 47
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1e-63 Score=631.57 Aligned_cols=515 Identities=17% Similarity=0.133 Sum_probs=392.0
Q ss_pred HHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 000475 898 LCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISF 977 (1470)
Q Consensus 898 l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~f 977 (1470)
++.++.....++..+.++.+.+.... .....+..++++.++..++.++..++....+.+...+++.++++++++.|+.|
T Consensus 25 ~~~~~~~~~~~~~~~~i~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~ 103 (555)
T TIGR01194 25 ALGLAGGLAIIALLASINNAIHEENF-LGQGSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGAPIEE 103 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 33444455555566666655432111 11112333455555666777888888889999999999999999999999999
Q ss_pred ccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 000475 978 FDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQA 1057 (1470)
Q Consensus 978 fd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~ 1057 (1470)
|++.++|++++|+++|++.++..+. .+..++..++.+++.++++++.+|.+.++++.++++.+.+. .
T Consensus 104 ~~~~~~G~l~srl~~Dv~~i~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~------------~ 170 (555)
T TIGR01194 104 IDRRGAHNLIPLLTHDIDQINAFLF-IFPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQ------------L 170 (555)
T ss_pred HHhcCcchhhHHHhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH------------H
Confidence 9999999999999999999998875 46677777888888888899999988777655444433322 1
Q ss_pred HHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHH--HHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHH
Q 000475 1058 YYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQEN--RFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNF 1135 (1470)
Q Consensus 1058 ~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~--~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~ 1135 (1470)
+..+..++..+......+.+.+++.|.+.|+.++|+|+.++ ...+++.+..++..+................+++..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (555)
T TIGR01194 171 LAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFL 250 (555)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122223333333445678899999999999999999854 4455566655555554433222222222222222222
Q ss_pred HHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCcccc--CC-CCC--
Q 000475 1136 AFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVI--KN-SRP-- 1210 (1470)
Q Consensus 1136 ~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~--~~-~~~-- 1210 (1470)
...+..++. ...+.++.|.+.....|...+...+..+...+.++++...+.+|+.++.+.+.+++... ++ ...
T Consensus 251 ~~~~~~~~~--~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~ 328 (555)
T TIGR01194 251 LIGCALFAA--AMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLL 328 (555)
T ss_pred HHHHHHHHH--HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccc
Confidence 111111111 11246777777777788888888888899999999999999999999976432221110 00 000
Q ss_pred CCCCCCCCcEEEEeEEEEeCCC---CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCC
Q 000475 1211 SPEWPSSGKIELENLLVQYNPT---LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM 1287 (1470)
Q Consensus 1211 ~~~wp~~g~I~~~nvs~~Y~~~---~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~ 1287 (1470)
.+.....+.|+++||+|+|++. .+++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||+|+++
T Consensus 329 ~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~ 408 (555)
T TIGR01194 329 LAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSA 408 (555)
T ss_pred cccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCC
Confidence 0111234689999999999753 2369999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHhcccEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHH
Q 000475 1288 IGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCL 1367 (1470)
Q Consensus 1288 i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1367 (1470)
++.+++|++++++||||.+|++|+|+|+.| +.+|++++++++++++++++..+|+|+||. .+||||||||++|
T Consensus 409 ~~~~~~~~~i~~v~q~~~lf~~ti~~n~~~--~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlal 481 (555)
T TIGR01194 409 DSRDDYRDLFSAIFADFHLFDDLIGPDEGE--HASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLAL 481 (555)
T ss_pred CCHHHHHhhCcEEccChhhhhhhhhccccc--chhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHH
Confidence 999999999999999999999999999743 578999999999999999999999999995 6899999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHH-h-cCCcEEEEEecChhhhhhcCEEEEEeCCEEEEe
Q 000475 1368 ARVLLKKKRILVLDEATASIDTATDNVIQQTIRE-E-TSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEY 1435 (1470)
Q Consensus 1368 ARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~-~-~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~ 1435 (1470)
|||++++|+|||||||||+||++|++.|++.+.+ . .+++|+|+||||++++..||+|+||++|+++|.
T Consensus 482 aRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 482 ICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999887643 2 468999999999999999999999999999986
No 48
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4.5e-64 Score=683.39 Aligned_cols=251 Identities=22% Similarity=0.284 Sum_probs=204.2
Q ss_pred HHHHHHHHHhhhHHHHHHHHh--cCCCCCccccCCCCCCCCCCCCC--cEEEEeEEEEeC--CCCCcceeeeeEEeeCCc
Q 000475 1175 IWNLCNVENKMISVERILQFT--NIPSEAPLVIKNSRPSPEWPSSG--KIELENLLVQYN--PTLPMVLKGITCTFPGEK 1248 (1470)
Q Consensus 1175 i~~~~~le~~~~sveRi~~~~--~~~~E~~~~~~~~~~~~~wp~~g--~I~~~nvs~~Y~--~~~~~vLk~is~~i~~Ge 1248 (1470)
.+...+.|+++.++||..+|. +.+.|.+.......+|. ..| .++++|++++|+ ++.+.+|+|||+++++||
T Consensus 714 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge 790 (1394)
T TIGR00956 714 KKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEK---ESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGT 790 (1394)
T ss_pred hhcccccccccccccccccCCCCccccccccccccccccc---cCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCE
Confidence 333456788889999998873 34444433222222222 134 379999999985 334579999999999999
Q ss_pred EEEEECCCCCCHHHHHHHHhcCCC---CCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCC-CcccHHHhcCcC------
Q 000475 1249 KIGVVGRTGSGKSTLIQALFRVVE---PSGGRILIDGVDISMIGLQDLRSRLSIIPQDPML-FQGTVRTNLDPL------ 1318 (1470)
Q Consensus 1249 kvgIVGrTGSGKSTLl~~L~rl~~---p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~L-F~gTIR~NLdp~------ 1318 (1470)
++||+||||||||||+++|.|+.+ |++|+|.+||.++. .++|++++||||++.+ +..||||||+..
T Consensus 791 ~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~ 866 (1394)
T TIGR00956 791 LTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQP 866 (1394)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCC
Confidence 999999999999999999999998 78899999999985 3589999999998764 566999999731
Q ss_pred CCCCHHH----HHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCC-EEEEeccCCCCCHHHHH
Q 000475 1319 EQHSDQE----IWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR-ILVLDEATASIDTATDN 1393 (1470)
Q Consensus 1319 ~~~sd~e----I~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~-ILlLDEaTsslD~~Td~ 1393 (1470)
.+.++++ +.++++..++.+ ..|+.+++.|.+||||||||++|||||+++|+ ||+||||||+||+.+..
T Consensus 867 ~~~~~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~ 939 (1394)
T TIGR00956 867 KSVSKSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAW 939 (1394)
T ss_pred CCCCHHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHH
Confidence 1334433 567777777654 36899998888999999999999999999997 99999999999999999
Q ss_pred HHHHHHHHh-cCCcEEEEEecChhhh--hhcCEEEEEeCC-EEEEecChh
Q 000475 1394 VIQQTIREE-TSRCTVITVAHRIPTV--IDNDLVLVLDEG-KVLEYDSPR 1439 (1470)
Q Consensus 1394 ~Iq~~I~~~-~~~~TVI~IAHRl~ti--~~~DrIlvL~~G-~vvE~g~p~ 1439 (1470)
.|++.|++. .+++|||+++|+++.. ..||+|++|++| +++++|++.
T Consensus 940 ~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~ 989 (1394)
T TIGR00956 940 SICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLG 989 (1394)
T ss_pred HHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcc
Confidence 999999986 4689999999999974 469999999997 999999974
No 49
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-65 Score=638.65 Aligned_cols=438 Identities=23% Similarity=0.371 Sum_probs=335.3
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcC--CCCcEEEECC-------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR--ISGAAIKVHG------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~--~~G~~i~~~g------- 659 (1470)
.++++|++++|+. .+.+++ ||++++|++++|+||||||||||+++|+|.++| ++|++ .++|
T Consensus 5 ~l~~~nl~~~~~~--------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i-~~~g~~~~~~~ 75 (506)
T PRK13549 5 LLEMKNITKTFGG--------VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEI-IFEGEELQASN 75 (506)
T ss_pred eEEEeeeEEEeCC--------eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEE-EECCEECCCCC
Confidence 5899999999963 357889 999999999999999999999999999999986 79986 6655
Q ss_pred -------EeEEEcCCCCCCC-ccHHHHHhcCCCC------CHH----HHHHHHHHhcchHHHHhccCCCcccccCCCCCC
Q 000475 660 -------KKAYVPQSSWIQT-GTIRENILFGKDM------RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINL 721 (1470)
Q Consensus 660 -------~~ayv~Q~~~i~~-~Ti~eNI~~g~~~------~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~L 721 (1470)
.++||+|++.++. .|++||+.++... +.+ +.+++++..++ .........+|
T Consensus 76 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~L 144 (506)
T PRK13549 76 IRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKL-----------DINPATPVGNL 144 (506)
T ss_pred HHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCC-----------CCCcccchhhC
Confidence 2799999987654 6999999987432 111 11222222222 11234567899
Q ss_pred chHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEE
Q 000475 722 SGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1470)
Q Consensus 722 SGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~ 799 (1470)
||||||||+||||++.+|+++||||||++||+.....+.+ ++..+ .+++|+|++||+++++.. ||+|++|++|++++
T Consensus 145 SgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~ 223 (506)
T PRK13549 145 GLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLD-IIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIG 223 (506)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEee
Confidence 9999999999999999999999999999999999888876 44443 357899999999999875 99999999999987
Q ss_pred ecChhhHHhhchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCccchhhcCcchHHH
Q 000475 800 SGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTV 879 (1470)
Q Consensus 800 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~ 879 (1470)
.|+.+++... +.
T Consensus 224 ~~~~~~~~~~---~~----------------------------------------------------------------- 235 (506)
T PRK13549 224 TRPAAGMTED---DI----------------------------------------------------------------- 235 (506)
T ss_pred ecccccCCHH---HH-----------------------------------------------------------------
Confidence 7654332110 00
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 000475 880 YSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTA 959 (1470)
Q Consensus 880 y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s 959 (1470)
+.
T Consensus 236 ----~~-------------------------------------------------------------------------- 237 (506)
T PRK13549 236 ----IT-------------------------------------------------------------------------- 237 (506)
T ss_pred ----HH--------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000475 960 QRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGI 1039 (1470)
Q Consensus 960 ~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~ 1039 (1470)
T Consensus 238 -------------------------------------------------------------------------------- 237 (506)
T PRK13549 238 -------------------------------------------------------------------------------- 237 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 1040 SIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNC 1119 (1470)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~ 1119 (1470)
.++ | .
T Consensus 238 -----------------~~~---------------------------~--------~----------------------- 242 (506)
T PRK13549 238 -----------------MMV---------------------------G--------R----------------------- 242 (506)
T ss_pred -----------------Hhh---------------------------C--------c-----------------------
Confidence 000 0 0
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCC
Q 000475 1120 GTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPS 1199 (1470)
Q Consensus 1120 ~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~ 1199 (1470)
. . .+ ..|.
T Consensus 243 -----------------------------~--~------------------------------------~~-----~~~~ 250 (506)
T PRK13549 243 -----------------------------E--L------------------------------------TA-----LYPR 250 (506)
T ss_pred -----------------------------C--c------------------------------------cc-----cccc
Confidence 0 0 00 0000
Q ss_pred CCccccCCCCCCCCCCCCCcEEEEeEEEEeCC-CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-CCCcE
Q 000475 1200 EAPLVIKNSRPSPEWPSSGKIELENLLVQYNP-TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-PSGGR 1277 (1470)
Q Consensus 1200 E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~-~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-p~~G~ 1277 (1470)
+. ++ +....|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+
T Consensus 251 ~~--------~~---~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~ 319 (506)
T PRK13549 251 EP--------HT---IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGE 319 (506)
T ss_pred cc--------cC---CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcE
Confidence 00 00 11124899999999952 22359999999999999999999999999999999999998 59999
Q ss_pred EEEcCEeCCCCCH-HHHhcccEEEccCC---CCCc-ccHHHhcCcC--CC------CCH----HHHHHHHHHcCcHHHHH
Q 000475 1278 ILIDGVDISMIGL-QDLRSRLSIIPQDP---MLFQ-GTVRTNLDPL--EQ------HSD----QEIWEVINKCHLAEIVR 1340 (1470)
Q Consensus 1278 I~IDG~dI~~i~l-~~LR~~isiIpQdp---~LF~-gTIR~NLdp~--~~------~sd----~eI~~aL~~~~L~~~v~ 1340 (1470)
|.+||.++...+. +..|++++|+||+| .+|. .|+.+|+... .. .+. +++.++++.+++.+
T Consensus 320 i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--- 396 (506)
T PRK13549 320 IFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKT--- 396 (506)
T ss_pred EEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccC---
Confidence 9999999876543 44678899999996 3564 5999999631 11 111 23556666665521
Q ss_pred hcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh
Q 000475 1341 QDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI 1419 (1470)
Q Consensus 1341 ~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~ 1419 (1470)
+..|.++ ..||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.
T Consensus 397 ---~~~~~~~----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~ 469 (506)
T PRK13549 397 ---ASPELAI----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVL 469 (506)
T ss_pred ---CCccccc----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHH
Confidence 1123333 4699999999999999999999999999999999999999999998753 4789999999999987
Q ss_pred h-cCEEEEEeCCEEEEecChhHHh
Q 000475 1420 D-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1420 ~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
. ||+|++|++|+++..|+++++.
T Consensus 470 ~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 470 GLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred HhCCEEEEEECCEEEEEeccccCC
Confidence 6 9999999999999999988764
No 50
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-65 Score=637.94 Aligned_cols=436 Identities=21% Similarity=0.319 Sum_probs=333.2
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+. ...+++ ||++++|++++|+||||||||||+++|+|..+|++|++ .++|
T Consensus 5 ~l~~~~l~~~~~~--------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i-~~~g~~i~~~~~~ 75 (510)
T PRK09700 5 YISMAGIGKSFGP--------VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTI-TINNINYNKLDHK 75 (510)
T ss_pred eEEEeeeEEEcCC--------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEE-EECCEECCCCCHH
Confidence 4899999999963 357888 99999999999999999999999999999999999986 6665
Q ss_pred -----EeEEEcCCCCCCC-ccHHHHHhcCCCC----------CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCC
Q 000475 660 -----KKAYVPQSSWIQT-GTIRENILFGKDM----------RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGI 719 (1470)
Q Consensus 660 -----~~ayv~Q~~~i~~-~Ti~eNI~~g~~~----------~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~ 719 (1470)
.++|++|++.++. .|++||+.++... +. ++.+++++.+++. ...+.+..
T Consensus 76 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~ 144 (510)
T PRK09700 76 LAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLK-----------VDLDEKVA 144 (510)
T ss_pred HHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCC-----------CCcccchh
Confidence 3799999987654 6999999886420 11 1122233333322 12345677
Q ss_pred CCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEE
Q 000475 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1470)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i 797 (1470)
+|||||||||+|||||+.+|+++||||||++||+.+...+.+. +..+ .+++|+|+|||+++++.. ||+|++|++|++
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i 223 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLI-MNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSS 223 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999998888764 4443 347999999999999875 999999999999
Q ss_pred EEecChhhHHhhchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCccchhhcCcchH
Q 000475 798 EQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKW 877 (1470)
Q Consensus 798 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~ 877 (1470)
++.|+++++... +. .. .
T Consensus 224 ~~~g~~~~~~~~---~~---~~------------------------------~--------------------------- 240 (510)
T PRK09700 224 VCSGMVSDVSND---DI---VR------------------------------L--------------------------- 240 (510)
T ss_pred eeecchhhCCHH---HH---HH------------------------------H---------------------------
Confidence 888776554210 00 00 0
Q ss_pred HHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHH
Q 000475 878 TVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIK 957 (1470)
Q Consensus 878 ~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~ 957 (1470)
..+
T Consensus 241 ---------~~~-------------------------------------------------------------------- 243 (510)
T PRK09700 241 ---------MVG-------------------------------------------------------------------- 243 (510)
T ss_pred ---------hcC--------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000475 958 TAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVIL 1037 (1470)
Q Consensus 958 ~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~ 1037 (1470)
.+.
T Consensus 244 ---------------~~~-------------------------------------------------------------- 246 (510)
T PRK09700 244 ---------------REL-------------------------------------------------------------- 246 (510)
T ss_pred ---------------CCc--------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 000475 1038 GISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFH 1117 (1470)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~ 1117 (1470)
.
T Consensus 247 -------------------~------------------------------------------------------------ 247 (510)
T PRK09700 247 -------------------Q------------------------------------------------------------ 247 (510)
T ss_pred -------------------c------------------------------------------------------------
Confidence 0
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcC
Q 000475 1118 NCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNI 1197 (1470)
Q Consensus 1118 ~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~ 1197 (1470)
. + +...
T Consensus 248 -------------------------------~----------------------------------------~---~~~~ 253 (510)
T PRK09700 248 -------------------------------N----------------------------------------R---FNAM 253 (510)
T ss_pred -------------------------------c----------------------------------------c---cccc
Confidence 0 0 0000
Q ss_pred CCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcE
Q 000475 1198 PSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGR 1277 (1470)
Q Consensus 1198 ~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~ 1277 (1470)
++.. .++ +....|+++|+++.|. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+
T Consensus 254 ~~~~-------~~~---~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~ 319 (510)
T PRK09700 254 KENV-------SNL---AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGE 319 (510)
T ss_pred cccc-------ccC---CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCe
Confidence 0000 000 0112599999998763 2899999999999999999999999999999999999999999
Q ss_pred EEEcCEeCCCCCH-HHHhcccEEEccCC---CCCcc-cHHHhcCcCCC------------CC----HHHHHHHHHHcCcH
Q 000475 1278 ILIDGVDISMIGL-QDLRSRLSIIPQDP---MLFQG-TVRTNLDPLEQ------------HS----DQEIWEVINKCHLA 1336 (1470)
Q Consensus 1278 I~IDG~dI~~i~l-~~LR~~isiIpQdp---~LF~g-TIR~NLdp~~~------------~s----d~eI~~aL~~~~L~ 1336 (1470)
|.+||.++...+. ..+|++++|+||++ .+|.+ |+++|+..... .+ .+++.++++..++.
T Consensus 320 I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 399 (510)
T PRK09700 320 IRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALK 399 (510)
T ss_pred EEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCC
Confidence 9999999876544 45788999999984 57765 99999864211 01 12345556665542
Q ss_pred HHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCh
Q 000475 1337 EIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRI 1415 (1470)
Q Consensus 1337 ~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl 1415 (1470)
++..+.++ ..||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. ++.|||+|||++
T Consensus 400 ------~~~~~~~~----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~ 469 (510)
T PRK09700 400 ------CHSVNQNI----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSEL 469 (510)
T ss_pred ------CCCccCcc----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 02234444 4599999999999999999999999999999999999999999998753 578999999999
Q ss_pred hhhhh-cCEEEEEeCCEEEEecChhH
Q 000475 1416 PTVID-NDLVLVLDEGKVLEYDSPRQ 1440 (1470)
Q Consensus 1416 ~ti~~-~DrIlvL~~G~vvE~g~p~~ 1440 (1470)
+.+.. ||+|++|++|++++.+++.+
T Consensus 470 ~~~~~~~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 470 PEIITVCDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred HHHHhhCCEEEEEECCEEEEEecCcc
Confidence 98865 99999999999999887633
No 51
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1e-64 Score=637.36 Aligned_cols=219 Identities=26% Similarity=0.428 Sum_probs=179.2
Q ss_pred cEEEEeEEEEeCC---CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEc-CE---eCCCCC--
Q 000475 1219 KIELENLLVQYNP---TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILID-GV---DISMIG-- 1289 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~---~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~ID-G~---dI~~i~-- 1289 (1470)
.++++|++++|.. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |. ++...+
T Consensus 279 ~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~ 358 (520)
T TIGR03269 279 IIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPD 358 (520)
T ss_pred eEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchh
Confidence 5999999999953 22469999999999999999999999999999999999999999999996 64 344433
Q ss_pred -HHHHhcccEEEccCCCCCcc-cHHHhcCc-CC-CC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000475 1290 -LQDLRSRLSIIPQDPMLFQG-TVRTNLDP-LE-QH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1361 (1470)
Q Consensus 1290 -l~~LR~~isiIpQdp~LF~g-TIR~NLdp-~~-~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQ 1361 (1470)
...+|++++|+||++.+|.. |+++|+.. .. .. .++++.++++.+++.+.- .++-++.++ ..|||||
T Consensus 359 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~--~~~~~~~~~----~~LSgGq 432 (520)
T TIGR03269 359 GRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAVITLKMVGFDEEK--AEEILDKYP----DELSEGE 432 (520)
T ss_pred hHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCcc--chhhhhCCh----hhCCHHH
Confidence 23567889999999988875 99999952 11 11 123466677777764210 000123333 4699999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000475 1362 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSP 1438 (1470)
Q Consensus 1362 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p 1438 (1470)
|||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .+.|||+|+|+++.+.. ||||++|++|++++.|+|
T Consensus 433 ~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~ 512 (520)
T TIGR03269 433 RHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDP 512 (520)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999998764 37899999999999976 999999999999999999
Q ss_pred hHHhh
Q 000475 1439 RQLLE 1443 (1470)
Q Consensus 1439 ~~Ll~ 1443 (1470)
+++.+
T Consensus 513 ~~~~~ 517 (520)
T TIGR03269 513 EEIVE 517 (520)
T ss_pred HHHHh
Confidence 88764
No 52
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-64 Score=631.57 Aligned_cols=201 Identities=18% Similarity=0.321 Sum_probs=173.6
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
..|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| ++++
T Consensus 318 ~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 384 (530)
T PRK15064 318 NALEVENLTKGFDN--GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANI 384 (530)
T ss_pred ceEEEEeeEEeeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEE
Confidence 36999999999964 3599999999999999999999999999999999999999999999998 3579
Q ss_pred EEEccCCC--CCc-ccHHHhcCcCC--CCCHHHHHHHHHHcCcH-HHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1298 SIIPQDPM--LFQ-GTVRTNLDPLE--QHSDQEIWEVINKCHLA-EIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1298 siIpQdp~--LF~-gTIR~NLdp~~--~~sd~eI~~aL~~~~L~-~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+|+||++. ++. .|+++|+..+. ...++++.++|+..++. +. .|.++ .+||||||||++||||+
T Consensus 385 ~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~----~~LSgGq~qrv~la~al 453 (530)
T PRK15064 385 GYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDD-------IKKSV----KVLSGGEKGRMLFGKLM 453 (530)
T ss_pred EEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhH-------hcCcc----cccCHHHHHHHHHHHHH
Confidence 99999974 443 59999986432 23456678888888873 32 23333 46999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEE-EecChhHHhhc
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVL-EYDSPRQLLED 1444 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vv-E~g~p~~Ll~~ 1444 (1470)
+++|+||+|||||++||+.+...+.+.|++. ++|||+|||+++.+.. ||+|++|++|+++ +.|++.++++.
T Consensus 454 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 454 MQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 9999999999999999999999999999875 4699999999999876 9999999999998 77999988764
No 53
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=8.8e-62 Score=620.34 Aligned_cols=539 Identities=18% Similarity=0.219 Sum_probs=424.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 267 QVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIG 346 (1470)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g 346 (1470)
+.+++.+++.++...+..++..++..+.|++++.+++.+.+... ... ...++.++++..++..++.....+...+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~--~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 93 (582)
T PRK11176 17 WPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKAD--RSV-LKWMPLVVIGLMILRGITSFISSYCISWVS 93 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc--hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677777777777778888888889999999987664322 111 122222233333444444444445567778
Q ss_pred HHHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 000475 347 IRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAAL 422 (1470)
Q Consensus 347 ~rir~~L~~~iy~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l 422 (1470)
.++...+...+|+|.++++.. .++.|++++.+++|++++.+.+. .+..++..++.+++.+++++.. +|+.+++.+
T Consensus 94 ~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~l~l~~l 172 (582)
T PRK11176 94 GKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYY-SWQLSLILI 172 (582)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 888888999999999987653 34899999999999999988654 4455666666666666666643 446666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 423 FSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIA 502 (1470)
Q Consensus 423 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~ 502 (1470)
+++++...+...+.++.++..++.++..++..+...|.++|+++||.+++|+.+.++.++.-++-.+...+.........
T Consensus 173 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T PRK11176 173 VIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISD 252 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666777888888898999999999999999999999999999999998888887764433333323222222222
Q ss_pred HHHHHH--HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 000475 503 FLFWAS--PTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPIT 580 (1470)
Q Consensus 503 ~~~~~~--p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~ 580 (1470)
.+.... -..+.++.++.+.+..+.++++.+.+++.++..+..|+..+...+..+.+++.+++|+.++++.+++.+...
T Consensus 253 ~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~ 332 (582)
T PRK11176 253 PIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGK 332 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCC
Confidence 211111 123334556677777889999999999999999999999999999999999999999999998665321111
Q ss_pred CCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC
Q 000475 581 EPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG 659 (1470)
Q Consensus 581 ~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g 659 (1470)
. ........|+++|++|+|+++ ..+.+++ |+++++||+++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 333 ~-~~~~~~~~i~~~~vsf~y~~~------~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I-~i~g 404 (582)
T PRK11176 333 R-VIERAKGDIEFRNVTFTYPGK------EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEI-LLDG 404 (582)
T ss_pred c-CCCCCCCeEEEEEEEEecCCC------CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceE-EECC
Confidence 1 111123469999999999753 3578999 99999999999999999999999999999999999997 7877
Q ss_pred E-------------eEEEcCCCCCCCccHHHHHhcCCC--CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchH
Q 000475 660 K-------------KAYVPQSSWIQTGTIRENILFGKD--MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1470)
Q Consensus 660 ~-------------~ayv~Q~~~i~~~Ti~eNI~~g~~--~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 724 (1470)
. ++||||+|.+|++||+|||.+|.+ .++++++++++.++++++++.+|+|.+|.+|++|.+||||
T Consensus 405 ~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGG 484 (582)
T PRK11176 405 HDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGG 484 (582)
T ss_pred EEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHH
Confidence 3 599999999999999999999863 6889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChh
Q 000475 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYE 804 (1470)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~ 804 (1470)
||||++||||++++|+|++|||||||||++++..+++. +....+++|+|+|||+++.++.||+|++|++|++++.|+++
T Consensus 485 qrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~-l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~ 563 (582)
T PRK11176 485 QRQRIAIARALLRDSPILILDEATSALDTESERAIQAA-LDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHA 563 (582)
T ss_pred HHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHH-HHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999998765 45555789999999999999999999999999999999999
Q ss_pred hHHhhchhHHHHHHH
Q 000475 805 DLIADQNSELVRQMK 819 (1470)
Q Consensus 805 ~l~~~~~~~~~~~~~ 819 (1470)
++.+ .+..+.++..
T Consensus 564 ~l~~-~~~~y~~l~~ 577 (582)
T PRK11176 564 ELLA-QNGVYAQLHK 577 (582)
T ss_pred HHHh-CCChHHHHHH
Confidence 9998 5556666554
No 54
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.1e-61 Score=618.51 Aligned_cols=538 Identities=19% Similarity=0.227 Sum_probs=431.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 267 QVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIG 346 (1470)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g 346 (1470)
+.+++.+++.+++..++.++..++....|++++.+++..-.... ... -+.+++++++..++..+......+...+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 82 (571)
T TIGR02203 6 WSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD--RSV-LWWVPLVVIGLAVLRGICSFVSTYLLSWVS 82 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc--hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567788889999999999999999999999998886543222 111 122232333344444444444445667788
Q ss_pred HHHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 000475 347 IRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAAL 422 (1470)
Q Consensus 347 ~rir~~L~~~iy~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l 422 (1470)
.++...+...+|+|.++.+.. ..+.|+++|.++.|++++.+++. .+..++...+.+++++++++. ++|+.+++.+
T Consensus 83 ~~~~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~-~~~~l~~i~l 161 (571)
T TIGR02203 83 NKVVRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLY-YSWQLTLIVV 161 (571)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHH
Confidence 888888888899998887643 23899999999999999998775 455555555556556555554 4546666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 423 FSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIA 502 (1470)
Q Consensus 423 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~ 502 (1470)
+++++.+.+...+.++.++..++..+..+++.+.++|.++|+++||.++.|+.+.++.++..++..+...+.....+...
T Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (571)
T TIGR02203 162 VMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISS 241 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777888889999999999999999999999999999999999999999888888776655554444333333322
Q ss_pred HHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 000475 503 FLFWASP--TLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPIT 580 (1470)
Q Consensus 503 ~~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~ 580 (1470)
.+..... ..+.++.++.+.+..+.+|++.+++++.++..+..|+..+...+..+.+++++.+|+.++++.+++.+...
T Consensus 242 ~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~ 321 (571)
T TIGR02203 242 PITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGT 321 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 2222222 22344567777778899999999999999999999999999999999999999999999998665322111
Q ss_pred CCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC
Q 000475 581 EPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG 659 (1470)
Q Consensus 581 ~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g 659 (1470)
. +....+..++++|++|+|++. ..+.+++ |+++++||+++|+|+||||||||+++|+|.++|.+|++ .++|
T Consensus 322 ~-~~~~~~~~i~~~~v~f~y~~~------~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I-~i~g 393 (571)
T TIGR02203 322 R-AIERARGDVEFRNVTFRYPGR------DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQI-LLDG 393 (571)
T ss_pred C-CCCCCCCeEEEEEEEEEcCCC------CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeE-EECC
Confidence 1 111223469999999999754 3468999 99999999999999999999999999999999999996 8887
Q ss_pred -------------EeEEEcCCCCCCCccHHHHHhcCC--CCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchH
Q 000475 660 -------------KKAYVPQSSWIQTGTIRENILFGK--DMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1470)
Q Consensus 660 -------------~~ayv~Q~~~i~~~Ti~eNI~~g~--~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 724 (1470)
.++||||+|++|++|++|||.++. +.++++++++++.|+++++++.+|+|.+|.+|++|.+||||
T Consensus 394 ~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgG 473 (571)
T TIGR02203 394 HDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGG 473 (571)
T ss_pred EeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHH
Confidence 369999999999999999999996 47889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChh
Q 000475 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYE 804 (1470)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~ 804 (1470)
||||++||||++++|+|++||||||+||+++++++.+. +....+++|+|+|||+.+.+..||+|++|++|++++.|+++
T Consensus 474 qrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~-L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~ 552 (571)
T TIGR02203 474 QRQRLAIARALLKDAPILILDEATSALDNESERLVQAA-LERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHN 552 (571)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHH
Confidence 99999999999999999999999999999999999765 45556789999999999999999999999999999999999
Q ss_pred hHHhhchhHHHHHH
Q 000475 805 DLIADQNSELVRQM 818 (1470)
Q Consensus 805 ~l~~~~~~~~~~~~ 818 (1470)
++.+ .+..+.+..
T Consensus 553 ~l~~-~~~~~~~~~ 565 (571)
T TIGR02203 553 ELLA-RNGLYAQLH 565 (571)
T ss_pred HHHH-cCCHHHHHH
Confidence 9987 344454443
No 55
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=8e-62 Score=632.65 Aligned_cols=532 Identities=22% Similarity=0.267 Sum_probs=421.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 268 VIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGI 347 (1470)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~ 347 (1470)
..++.+++.++...++.++..++.++.|++++.+++.+..... ... -+.+++++++..++..++.....+...+++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~--~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (708)
T TIGR01193 149 PLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM--MGT-LGIISIGLIIAYIIQQILSYIQIFLLNVLGQ 225 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777777888888899999999999999987654322 111 2233334444444555555555566778888
Q ss_pred HHHHHHHHHHHHHhccccc---CCCCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 000475 348 RVRSALTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFLYI-HRIWLLPVQVFLALVILYKNLGAAPAFAALF 423 (1470)
Q Consensus 348 rir~~L~~~iy~K~L~ls~---~~~~~G~ivnlms~D~~~i~~~~~~~-~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~ 423 (1470)
++...+...+|+|.++++. ..+++|+++|.++ |++.+.+++... .......+.+++.+++++. ++|+.+++.++
T Consensus 226 ~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~li~l~ 303 (708)
T TIGR01193 226 RLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVR-QNMLLFLLSLL 303 (708)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHH
Confidence 9999999999999998875 3459999999998 999999876432 2222222333333334443 34366666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH----H
Q 000475 424 STIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTC----S 499 (1470)
Q Consensus 424 ~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~----~ 499 (1470)
++++...+...+.+..++..++.++..+++.+...|.++|+++||.+++|+.+.++.++...+..+...+..... +
T Consensus 304 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (708)
T TIGR01193 304 SIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQA 383 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666677777888889999999999999999999999999999999999999998888776544433332222222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC-C
Q 000475 500 AIAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKK-P 578 (1470)
Q Consensus 500 ~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~-~ 578 (1470)
...++... ..+.++++|++.+..+.+|.|.++++..++..+..|+..+...+..+.+++++.+|+.++++.+++.+ .
T Consensus 384 ~~~~~~~~--~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 461 (708)
T TIGR01193 384 IKAVTKLI--LNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINK 461 (708)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccc
Confidence 22222212 22445677888888999999999999999999999999999999999999999999999998765221 1
Q ss_pred CCCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEE
Q 000475 579 ITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKV 657 (1470)
Q Consensus 579 ~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~ 657 (1470)
....+.......|+++|++|+|+++ .+.|+| |+++++|+++||+|+||||||||+++|+|+++|++|++ .+
T Consensus 462 ~~~~~~~~~~~~I~~~~vsf~y~~~-------~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I-~i 533 (708)
T TIGR01193 462 KKRTELNNLNGDIVINDVSYSYGYG-------SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEI-LL 533 (708)
T ss_pred ccccCCCCCCCcEEEEEEEEEcCCC-------CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEE-EE
Confidence 1111112223579999999999743 468999 99999999999999999999999999999999999996 88
Q ss_pred CC-------------EeEEEcCCCCCCCccHHHHHhcCC--CCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCc
Q 000475 658 HG-------------KKAYVPQSSWIQTGTIRENILFGK--DMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1470)
Q Consensus 658 ~g-------------~~ayv~Q~~~i~~~Ti~eNI~~g~--~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LS 722 (1470)
+| .++||||+|++|++||+|||.+|. +.++++..++++.++++++++.+|+|.+|.+||+|.+||
T Consensus 534 dg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LS 613 (708)
T TIGR01193 534 NGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSIS 613 (708)
T ss_pred CCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCC
Confidence 87 479999999999999999999983 467788899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecC
Q 000475 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGK 802 (1470)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~ 802 (1470)
||||||++||||++++|+|++||||||+||+++++++.+.+. .. +++|+|+|||+++.+..||+|++|++|++++.|+
T Consensus 614 gGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~-~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~ 691 (708)
T TIGR01193 614 GGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLL-NL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGS 691 (708)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHH-Hh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECC
Confidence 999999999999999999999999999999999998877654 43 6899999999999999999999999999999999
Q ss_pred hhhHHhhchhHHHHH
Q 000475 803 YEDLIADQNSELVRQ 817 (1470)
Q Consensus 803 ~~~l~~~~~~~~~~~ 817 (1470)
++|+++ .+..+.++
T Consensus 692 ~~~L~~-~~~~y~~l 705 (708)
T TIGR01193 692 HDELLD-RNGFYASL 705 (708)
T ss_pred HHHHHh-cCCcHHHH
Confidence 999987 44445443
No 56
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3e-61 Score=615.91 Aligned_cols=537 Identities=20% Similarity=0.249 Sum_probs=414.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 268 VIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGI 347 (1470)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~ 347 (1470)
..++.+++.++...++.++..++..+.|+++..+++.+..... .+......+++++++..++..++.....+...+.+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (592)
T PRK10790 16 AYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGN-LPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAV 94 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667778888888888899999999999999997643222 111111222333444444555555555566778888
Q ss_pred HHHHHHHHHHHHHhccccc---CCCCHHHHHHHHHHhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 000475 348 RVRSALTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFLYIHR-IWLLPVQVFLALVILYKNLGAAPAFAALF 423 (1470)
Q Consensus 348 rir~~L~~~iy~K~L~ls~---~~~~~G~ivnlms~D~~~i~~~~~~~~~-~w~~pl~i~~~~~lL~~~lG~~~~l~~l~ 423 (1470)
++...+...+|+|.++.+. ..++.|+++|.+++|++.+.+++..... +....+.+++++.+++ .++|+.+++.++
T Consensus 95 ~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~li~l~ 173 (592)
T PRK10790 95 GVVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMF-SLDWRMALVAIM 173 (592)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 8888999999999998764 3458999999999999999987665433 3333333333333332 345455555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Q 000475 424 STIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSA--- 500 (1470)
Q Consensus 424 ~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~--- 500 (1470)
++++.+.+.....++.++..++..+..++..+...|.++|+++||.|+.|+.+.+++.+..++..+...+.....+.
T Consensus 174 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (592)
T PRK10790 174 IFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLR 253 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555566667777777888888888889999999999999999999999999887754433322221111111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 000475 501 -IAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPI 579 (1470)
Q Consensus 501 -~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~ 579 (1470)
...++.....++ ++..+.+ ...+.++.+.+++++.++..+..|+..++.....+.+++.|.+||.++++.++++...
T Consensus 254 ~~~~~~~~~~~~~-~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~ 331 (592)
T PRK10790 254 PLLSLFSALILCG-LLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGN 331 (592)
T ss_pred HHHHHHHHHHHHH-HHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCC
Confidence 111111111111 1122223 3577899999999999999999999999999999999999999999999865432111
Q ss_pred CCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEEC
Q 000475 580 TEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVH 658 (1470)
Q Consensus 580 ~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~ 658 (1470)
... ......|+++|++|+|+++ .+.++| ||++++||+++|+|+||||||||+++|+|+++|++|++ .++
T Consensus 332 ~~~--~~~~~~i~~~~v~f~y~~~-------~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I-~id 401 (592)
T PRK10790 332 DDR--PLQSGRIDIDNVSFAYRDD-------NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEI-RLD 401 (592)
T ss_pred Ccc--CCCCCeEEEEEEEEEeCCC-------CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceE-EEC
Confidence 111 1123469999999999743 358999 99999999999999999999999999999999999986 787
Q ss_pred CE-------------eEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 659 GK-------------KAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 659 g~-------------~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
|. ++||||+|++|++||+|||.+|.+.++++.+++++.++++++++.+|+|.+|.+|++|.+|||||
T Consensus 402 g~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGq 481 (592)
T PRK10790 402 GRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQ 481 (592)
T ss_pred CEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHH
Confidence 73 79999999999999999999999888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhh
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYED 805 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~ 805 (1470)
|||++||||++++|+|+|||||||+||+++++++.+. +....+++|+|+|||+++.++.||+|++|++|++++.|+++|
T Consensus 482 rQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~-l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~ 560 (592)
T PRK10790 482 KQLLALARVLVQTPQILILDEATANIDSGTEQAIQQA-LAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQ 560 (592)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999999888664 555667899999999999999999999999999999999999
Q ss_pred HHhhchhHHHHHHHH
Q 000475 806 LIADQNSELVRQMKA 820 (1470)
Q Consensus 806 l~~~~~~~~~~~~~~ 820 (1470)
+++ .+..+.++...
T Consensus 561 L~~-~~~~y~~l~~~ 574 (592)
T PRK10790 561 LLA-AQGRYWQMYQL 574 (592)
T ss_pred HHh-CCCHHHHHHHH
Confidence 997 56677766654
No 57
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.4e-64 Score=630.77 Aligned_cols=431 Identities=23% Similarity=0.369 Sum_probs=331.3
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+. ...+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 4 ~i~~~~l~~~~~~--------~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i-~~~g~~~~~~~~~ 74 (501)
T PRK10762 4 LLQLKGIDKAFPG--------VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSI-LYLGKEVTFNGPK 74 (501)
T ss_pred eEEEeeeEEEeCC--------eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEE-EECCEECCCCCHH
Confidence 4889999999963 357889 99999999999999999999999999999999999987 6655
Q ss_pred -----EeEEEcCCCCCC-CccHHHHHhcCCCC-------CHH----HHHHHHHHhcchHHHHhccCCCcccccCCCCCCc
Q 000475 660 -----KKAYVPQSSWIQ-TGTIRENILFGKDM-------RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1470)
Q Consensus 660 -----~~ayv~Q~~~i~-~~Ti~eNI~~g~~~-------~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LS 722 (1470)
.++|++|++.++ +.|++||+.++... +.. +.+++++.+++.+ .......+||
T Consensus 75 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS 143 (501)
T PRK10762 75 SSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRF-----------SSDKLVGELS 143 (501)
T ss_pred HHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCC-----------CccCchhhCC
Confidence 379999998665 46999999987432 111 1222233332211 2245677999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEe
Q 000475 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQS 800 (1470)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~ 800 (1470)
||||||++|||||..+|+++||||||++||+.+...+.+ .+..+ .+++|+|++||+++++.. ||+|++|++|+++..
T Consensus 144 gG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~ 222 (501)
T PRK10762 144 IGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFR-VIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEe
Confidence 999999999999999999999999999999999888875 44433 347899999999999865 999999999999876
Q ss_pred cChhhHHhhchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCccchhhcCcchHHHH
Q 000475 801 GKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVY 880 (1470)
Q Consensus 801 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 880 (1470)
|+.+++..+ +. . +
T Consensus 223 ~~~~~~~~~---~~---~-------------------------------~------------------------------ 235 (501)
T PRK10762 223 REVADLTED---SL---I-------------------------------E------------------------------ 235 (501)
T ss_pred cCcCcCCHH---HH---H-------------------------------H------------------------------
Confidence 654332110 00 0 0
Q ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000475 881 SAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQ 960 (1470)
Q Consensus 881 ~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~ 960 (1470)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T PRK10762 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000475 961 RLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGIS 1040 (1470)
Q Consensus 961 ~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~ 1040 (1470)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T PRK10762 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHh
Q 000475 1041 IWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCG 1120 (1470)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~ 1120 (1470)
.++ |
T Consensus 236 ----------------~~~---------------------------~--------------------------------- 239 (501)
T PRK10762 236 ----------------MMV---------------------------G--------------------------------- 239 (501)
T ss_pred ----------------Hhc---------------------------C---------------------------------
Confidence 000 0
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCC
Q 000475 1121 TMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSE 1200 (1470)
Q Consensus 1121 ~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E 1200 (1470)
. +.. ..++.
T Consensus 240 ----------------------------~----------------------------------------~~~---~~~~~ 248 (501)
T PRK10762 240 ----------------------------R----------------------------------------KLE---DQYPR 248 (501)
T ss_pred ----------------------------C----------------------------------------Ccc---ccccc
Confidence 0 000 00000
Q ss_pred CccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Q 000475 1201 APLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILI 1280 (1470)
Q Consensus 1201 ~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~I 1280 (1470)
.+ ++ |..-.|+++|+++ .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+
T Consensus 249 ~~-------~~---~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~ 311 (501)
T PRK10762 249 LD-------KA---PGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTL 311 (501)
T ss_pred cc-------cC---CCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEE
Confidence 00 00 1112488999974 2799999999999999999999999999999999999999999999
Q ss_pred cCEeCCCCCH-HHHhcccEEEccCC---CCCc-ccHHHhcCcCC-----C----CC----HHHHHHHHHHcCcHHHHHhc
Q 000475 1281 DGVDISMIGL-QDLRSRLSIIPQDP---MLFQ-GTVRTNLDPLE-----Q----HS----DQEIWEVINKCHLAEIVRQD 1342 (1470)
Q Consensus 1281 DG~dI~~i~l-~~LR~~isiIpQdp---~LF~-gTIR~NLdp~~-----~----~s----d~eI~~aL~~~~L~~~v~~l 1342 (1470)
||.++...+. +.+|++++|+||+| .+|. -|+++|+.... . .+ ++++.++++.+++.+
T Consensus 312 ~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----- 386 (501)
T PRK10762 312 DGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKT----- 386 (501)
T ss_pred CCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCC-----
Confidence 9999987665 34678899999997 3554 59999996310 0 11 223555666665420
Q ss_pred ccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-
Q 000475 1343 QRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID- 1420 (1470)
Q Consensus 1343 p~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~- 1420 (1470)
+..|.++ ..||||||||++|||||+.+|+||+|||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+..
T Consensus 387 -~~~~~~~----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~ 461 (501)
T PRK10762 387 -PSMEQAI----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGM 461 (501)
T ss_pred -CCccCch----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh
Confidence 1133333 4699999999999999999999999999999999999999999999864 47899999999999876
Q ss_pred cCEEEEEeCCEEEEecChhHHh
Q 000475 1421 NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1421 ~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
||+|++|++|++++.|+++++.
T Consensus 462 ~d~v~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 462 SDRILVMHEGRISGEFTREQAT 483 (501)
T ss_pred CCEEEEEECCEEEEEeccccCC
Confidence 9999999999999999988764
No 58
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=6e-64 Score=627.54 Aligned_cols=445 Identities=22% Similarity=0.362 Sum_probs=338.9
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+. ...+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 11 ~l~~~~l~~~~~~--------~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~ 81 (510)
T PRK15439 11 LLCARSISKQYSG--------VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTL-EIGGNPCARLTPA 81 (510)
T ss_pred eEEEEeEEEEeCC--------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEECCCCCHH
Confidence 5899999999963 357888 99999999999999999999999999999999999987 6665
Q ss_pred -----EeEEEcCCCCCCC-ccHHHHHhcCCCCC---HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHH
Q 000475 660 -----KKAYVPQSSWIQT-GTIRENILFGKDMR---QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQ 730 (1470)
Q Consensus 660 -----~~ayv~Q~~~i~~-~Ti~eNI~~g~~~~---~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 730 (1470)
.++|++|++.++. .|++||+.++.... +++.+++++..++.. ....+..+|||||||||+
T Consensus 82 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrv~ 150 (510)
T PRK15439 82 KAHQLGIYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQL-----------DLDSSAGSLEVADRQIVE 150 (510)
T ss_pred HHHhCCEEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCc-----------cccCChhhCCHHHHHHHH
Confidence 2789999987655 69999999975432 123334444444422 224567799999999999
Q ss_pred HHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhhHHh
Q 000475 731 LARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLIA 808 (1470)
Q Consensus 731 LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 808 (1470)
|||||+.+|+++||||||++||+.....+.+. ++.+ .+++|+|++||+++++.. ||+|++|++|++++.|+++++..
T Consensus 151 la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 151 ILRGLMRDSRILILDEPTASLTPAETERLFSR-IRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred HHHHHHcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 99999999999999999999999998888764 4443 357999999999999865 99999999999999888776543
Q ss_pred hchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCccchhhcCcchHHHHHHHHHHhc
Q 000475 809 DQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYSAFITLVY 888 (1470)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~ 888 (1470)
+ +..+... . . .. .+ .
T Consensus 230 ~---~~~~~~~------~-----------------------~----~~-----~~----------~-------------- 244 (510)
T PRK15439 230 D---DIIQAIT------P-----------------------A----AR-----EK----------S-------------- 244 (510)
T ss_pred H---HHHHHHh------C-----------------------c----cc-----cc----------c--------------
Confidence 1 0000000 0 0 00 00 0
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 889 KGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMIT 968 (1470)
Q Consensus 889 ~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~ 968 (1470)
..
T Consensus 245 -------------------------------~~----------------------------------------------- 246 (510)
T PRK15439 245 -------------------------------LS----------------------------------------------- 246 (510)
T ss_pred -------------------------------cc-----------------------------------------------
Confidence 00
Q ss_pred HHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh
Q 000475 969 SVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNT 1048 (1470)
Q Consensus 969 ~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~ 1048 (1470)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK15439 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHH
Q 000475 1049 ARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLR 1128 (1470)
Q Consensus 1049 ~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~ 1128 (1470)
..
T Consensus 247 --------~~---------------------------------------------------------------------- 248 (510)
T PRK15439 247 --------AS---------------------------------------------------------------------- 248 (510)
T ss_pred --------cc----------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCC
Q 000475 1129 INLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNS 1208 (1470)
Q Consensus 1129 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~ 1208 (1470)
++. . ...|...+
T Consensus 249 ------------------------------------------------------------~~~-~-~~~~~~~~------ 260 (510)
T PRK15439 249 ------------------------------------------------------------QKL-W-LELPGNRR------ 260 (510)
T ss_pred ------------------------------------------------------------ccc-c-cccccccc------
Confidence 000 0 00000000
Q ss_pred CCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCC
Q 000475 1209 RPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI 1288 (1470)
Q Consensus 1209 ~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i 1288 (1470)
.++ +..-.|+++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...
T Consensus 261 ~~~---~~~~~l~~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~ 330 (510)
T PRK15439 261 QQA---AGAPVLTVEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINAL 330 (510)
T ss_pred ccC---CCCceEEEeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCC
Confidence 000 0112489999983 169999999999999999999999999999999999999999999999999887
Q ss_pred CHHH-HhcccEEEccCC---CCCcc-cHHHhcCcC-----CC--CC---HHHHHHHHHHcCcHHHHHhcccccCccccCC
Q 000475 1289 GLQD-LRSRLSIIPQDP---MLFQG-TVRTNLDPL-----EQ--HS---DQEIWEVINKCHLAEIVRQDQRLLDAPVAED 1353 (1470)
Q Consensus 1289 ~l~~-LR~~isiIpQdp---~LF~g-TIR~NLdp~-----~~--~s---d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~ 1353 (1470)
+... .|++++|+||+| .+|.. |+++|+... .. .. ++++.++++..++. ++..|.++
T Consensus 331 ~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~~~~~~--- 401 (510)
T PRK15439 331 STAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIK------FNHAEQAA--- 401 (510)
T ss_pred CHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCC------CCCccCcc---
Confidence 7654 567899999996 36654 999998421 10 11 12344555555542 12234444
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCE
Q 000475 1354 GENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGK 1431 (1470)
Q Consensus 1354 G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~ 1431 (1470)
..||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|+
T Consensus 402 -~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~ 480 (510)
T PRK15439 402 -RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGE 480 (510)
T ss_pred -ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 4699999999999999999999999999999999999999999998753 47999999999999976 99999999999
Q ss_pred EEEecChhHHhhc
Q 000475 1432 VLEYDSPRQLLED 1444 (1470)
Q Consensus 1432 vvE~g~p~~Ll~~ 1444 (1470)
+++.|+++++.++
T Consensus 481 i~~~~~~~~~~~~ 493 (510)
T PRK15439 481 ISGALTGAAINVD 493 (510)
T ss_pred EEEEEccccCCHH
Confidence 9999999887643
No 59
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=8.6e-64 Score=626.46 Aligned_cols=213 Identities=25% Similarity=0.341 Sum_probs=175.1
Q ss_pred cEEEEeEEEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-CCcEEEEcCEeCCCCCH-HHHhc
Q 000475 1219 KIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-SGGRILIDGVDISMIGL-QDLRS 1295 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-~~G~I~IDG~dI~~i~l-~~LR~ 1295 (1470)
-|+++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+. ..+|+
T Consensus 257 ~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~ 336 (500)
T TIGR02633 257 ILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIRA 336 (500)
T ss_pred eEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 48999999999432 23599999999999999999999999999999999999995 89999999999975443 56788
Q ss_pred ccEEEccCC---CCCc-ccHHHhcCcC-----CC---CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCCh
Q 000475 1296 RLSIIPQDP---MLFQ-GTVRTNLDPL-----EQ---HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSV 1359 (1470)
Q Consensus 1296 ~isiIpQdp---~LF~-gTIR~NLdp~-----~~---~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSg 1359 (1470)
+++++||++ .+|. .|+++|+... .. .. .+++.++++++++.+ .-.|.++ ..|||
T Consensus 337 ~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LSg 406 (500)
T TIGR02633 337 GIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKT------ASPFLPI----GRLSG 406 (500)
T ss_pred CCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccC------CCccCcc----ccCCH
Confidence 999999996 3665 4999999642 11 11 123556666665521 1134444 46999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecC
Q 000475 1360 GQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDS 1437 (1470)
Q Consensus 1360 GQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~ 1437 (1470)
|||||++|||||+++|++|+|||||++||+.+.+.+++.|++.. ++.|||+|||+++.+.. ||+|++|++|+++...+
T Consensus 407 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~ 486 (500)
T TIGR02633 407 GNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFV 486 (500)
T ss_pred HHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEc
Confidence 99999999999999999999999999999999999999988753 47899999999999976 99999999999998876
Q ss_pred hhHH
Q 000475 1438 PRQL 1441 (1470)
Q Consensus 1438 p~~L 1441 (1470)
..++
T Consensus 487 ~~~~ 490 (500)
T TIGR02633 487 NHAL 490 (500)
T ss_pred cccC
Confidence 5543
No 60
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.8e-60 Score=642.82 Aligned_cols=216 Identities=17% Similarity=0.200 Sum_probs=188.1
Q ss_pred CCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcc
Q 000475 1217 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSR 1296 (1470)
Q Consensus 1217 ~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~ 1296 (1470)
...|+++|++++|+.+...+|+|+||+|++||.+||+|+||||||||+++|.|+.+|++|+|.++|.++.+ ..++.|++
T Consensus 1935 ~~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 34599999999997533469999999999999999999999999999999999999999999999999975 46678899
Q ss_pred cEEEccCCCCCcc-cHHHhcCcC---CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1297 LSIIPQDPMLFQG-TVRTNLDPL---EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1297 isiIpQdp~LF~g-TIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
|||+||++.++.. |+||||..+ ...+. +.+.++++.++|.++.. ..+ ..||||||||+++|
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~d-------k~~----~~LSGGqKqRLslA 2082 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYAD-------RLA----GTYSGGNKRKLSTA 2082 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhc-------CCh----hhCCHHHHHHHHHH
Confidence 9999999988865 999999642 11222 33556788888876543 333 35999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREE-TSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~-~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
|||+.+|+||+|||||++||+.+.+.+++.|++. .+++|||++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 2083 ~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2083 IALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 9999999999999999999999999999999885 357999999999999976 999999999999999999999754
No 61
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-63 Score=620.68 Aligned_cols=433 Identities=24% Similarity=0.351 Sum_probs=329.6
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+. ...+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 4 ~l~~~~l~~~~~~--------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I-~~~g~~i~~~~~~ 74 (501)
T PRK11288 4 YLSFDGIGKTFPG--------VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSI-LIDGQEMRFASTT 74 (501)
T ss_pred eEEEeeeEEEECC--------EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEE-EECCEECCCCCHH
Confidence 5889999999963 257888 99999999999999999999999999999999999986 6654
Q ss_pred -----EeEEEcCCCCCCC-ccHHHHHhcCCC------CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCch
Q 000475 660 -----KKAYVPQSSWIQT-GTIRENILFGKD------MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1470)
Q Consensus 660 -----~~ayv~Q~~~i~~-~Ti~eNI~~g~~------~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 723 (1470)
.++|++|++.++. .|++||+.++.. .+. ++.+++++.+++. .....+..+|||
T Consensus 75 ~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSg 143 (501)
T PRK11288 75 AALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVD-----------IDPDTPLKYLSI 143 (501)
T ss_pred HHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCC-----------CCcCCchhhCCH
Confidence 3799999987765 599999998642 111 1222333333332 112456779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000475 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 801 (1470)
|||||++||||++.+|+++||||||++||+.+...+.+. +..+ .+++|+|+|||+++++.. ||+|++|++|+++..+
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~ 222 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRV-IRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATF 222 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 999999999999999999999999999999998888764 4433 357899999999999865 9999999999987543
Q ss_pred ChhhHHhhchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCccchhhcCcchHHHHH
Q 000475 802 KYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYS 881 (1470)
Q Consensus 802 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~ 881 (1470)
+..+ . . . .+ +
T Consensus 223 ~~~~--~-~----------------------------------~---~~------------------~------------ 232 (501)
T PRK11288 223 DDMA--Q-V----------------------------------D---RD------------------Q------------ 232 (501)
T ss_pred Cccc--c-C----------------------------------C---HH------------------H------------
Confidence 2100 0 0 0 00 0
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 882 AFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQR 961 (1470)
Q Consensus 882 ~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~ 961 (1470)
+..
T Consensus 233 -~~~---------------------------------------------------------------------------- 235 (501)
T PRK11288 233 -LVQ---------------------------------------------------------------------------- 235 (501)
T ss_pred -HHH----------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000475 962 LFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISI 1041 (1470)
Q Consensus 962 l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~ 1041 (1470)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T PRK11288 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000475 1042 WYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGT 1121 (1470)
Q Consensus 1042 ~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~ 1121 (1470)
.+. .
T Consensus 236 ---------------~~~-----------~-------------------------------------------------- 239 (501)
T PRK11288 236 ---------------AMV-----------G-------------------------------------------------- 239 (501)
T ss_pred ---------------Hhc-----------C--------------------------------------------------
Confidence 000 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCC
Q 000475 1122 MEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEA 1201 (1470)
Q Consensus 1122 ~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~ 1201 (1470)
. .. ++. .+.++
T Consensus 240 ---------------------------~-~~------------------------------------~~~-----~~~~~ 250 (501)
T PRK11288 240 ---------------------------R-EI------------------------------------GDI-----YGYRP 250 (501)
T ss_pred ---------------------------C-Cc------------------------------------ccc-----ccccc
Confidence 0 00 000 00000
Q ss_pred ccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEc
Q 000475 1202 PLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILID 1281 (1470)
Q Consensus 1202 ~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~ID 1281 (1470)
.+ +....++++|++++ .+++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+|
T Consensus 251 -------~~----~~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~ 313 (501)
T PRK11288 251 -------RP----LGEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLD 313 (501)
T ss_pred -------cC----CCCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEEC
Confidence 00 01124889999742 38999999999999999999999999999999999999999999999
Q ss_pred CEeCCCCCH-HHHhcccEEEccCCC---CCc-ccHHHhcCcCC--C-------CC----HHHHHHHHHHcCcHHHHHhcc
Q 000475 1282 GVDISMIGL-QDLRSRLSIIPQDPM---LFQ-GTVRTNLDPLE--Q-------HS----DQEIWEVINKCHLAEIVRQDQ 1343 (1470)
Q Consensus 1282 G~dI~~i~l-~~LR~~isiIpQdp~---LF~-gTIR~NLdp~~--~-------~s----d~eI~~aL~~~~L~~~v~~lp 1343 (1470)
|.++...+. +..|++++|+||+|. +|. .|+.+|+.... . .. ++++.+.++.+++. +
T Consensus 314 g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~------~ 387 (501)
T PRK11288 314 GKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIK------T 387 (501)
T ss_pred CEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcc------c
Confidence 999875443 456789999999973 554 69999986321 0 01 12355666666552 1
Q ss_pred cccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-c
Q 000475 1344 RLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-N 1421 (1470)
Q Consensus 1344 ~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~ 1421 (1470)
+..++++ .+||||||||++|||||+.+|++|||||||++||..+.+.+.+.|++.. .+.|||+|||+++.+.. |
T Consensus 388 ~~~~~~~----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~ 463 (501)
T PRK11288 388 PSREQLI----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVA 463 (501)
T ss_pred CCccCcc----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhC
Confidence 1234444 4699999999999999999999999999999999999999999998753 47899999999999966 9
Q ss_pred CEEEEEeCCEEEEecChhHHh
Q 000475 1422 DLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1422 DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|+|++|++|++++.|++.+..
T Consensus 464 d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 464 DRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred CEEEEEECCEEEEEEccccCC
Confidence 999999999999999987755
No 62
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=3.7e-60 Score=605.06 Aligned_cols=533 Identities=19% Similarity=0.257 Sum_probs=411.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 269 IIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIR 348 (1470)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~r 348 (1470)
.++.+++.+.+..++.++..++..+.|+++..+++.+..... . +. +++.+++..++..+......+...++..+
T Consensus 13 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~---~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (588)
T PRK13657 13 YLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKGD---I--FP-LLAAWAGFGLFNIIAGVLVARHADRLAHR 86 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---H--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667778888888888999999999999999997754321 1 11 11111111222222222234456677788
Q ss_pred HHHHHHHHHHHHhccccc---CCCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 000475 349 VRSALTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFS 424 (1470)
Q Consensus 349 ir~~L~~~iy~K~L~ls~---~~~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~ 424 (1470)
+|..+...+|+|.++++. ...+.|++++.++.|++.+.+.+. .+..+....+..++.+++++ .++|+.+++.+++
T Consensus 87 ~~~~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~l~~l~~ 165 (588)
T PRK13657 87 RRLAVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLAL-FMNWRLSLVLVVL 165 (588)
T ss_pred HHHHHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 888889999999998764 334999999999999999876543 22233222222222222222 3443555666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Q 000475 425 TIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREI----ERDSLKKYLYTCSA 500 (1470)
Q Consensus 425 ~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~----E~~~l~~~~~~~~~ 500 (1470)
+++...+...+.++.++.+++.++..++......|.++|++.||.|+.|+.+.+++.+.-++ +.+..+.......+
T Consensus 166 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (588)
T PRK13657 166 GIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVL 245 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677888888899999999999999999999999999999999999877777655333 22222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC-C
Q 000475 501 IAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKP-I 579 (1470)
Q Consensus 501 ~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~-~ 579 (1470)
..+ ......+.+++++++.+..+.+|.+.+++++.++..+..|+..+...+..+.+++.+++|+.+++..+++.+. .
T Consensus 246 ~~~--~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~ 323 (588)
T PRK13657 246 NRA--ASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPP 323 (588)
T ss_pred HHH--HHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC
Confidence 211 1112234456778888888999999999999999999999999999999999999999999999976542211 1
Q ss_pred CCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEEC
Q 000475 580 TEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVH 658 (1470)
Q Consensus 580 ~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~ 658 (1470)
...+....+..|+++|++|+|+++ .+.+++ |+++++|++++|+|+||||||||+++|+|+++|.+|++ .++
T Consensus 324 ~~~~~~~~~~~I~~~~vsf~y~~~-------~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I-~i~ 395 (588)
T PRK13657 324 GAIDLGRVKGAVEFDDVSFSYDNS-------RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRI-LID 395 (588)
T ss_pred CCCCcCCCCCeEEEEEEEEEeCCC-------CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEE-EEC
Confidence 111111123469999999999742 357999 99999999999999999999999999999999999986 787
Q ss_pred C-------------EeEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchH
Q 000475 659 G-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1470)
Q Consensus 659 g-------------~~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 724 (1470)
| .++||||+|++|++||+|||.++++ .++++.+++++.+++++.++.+|+|.+|.+|++|.+||||
T Consensus 396 g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgG 475 (588)
T PRK13657 396 GTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGG 475 (588)
T ss_pred CEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHH
Confidence 7 4799999999999999999999964 5678888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChh
Q 000475 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYE 804 (1470)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~ 804 (1470)
||||++||||++++|+|++||||||+||+++++.+++. +....+++|+|+|||+++.++.||+|++|++|++.+.|+++
T Consensus 476 q~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~-l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~ 554 (588)
T PRK13657 476 ERQRLAIARALLKDPPILILDEATSALDVETEAKVKAA-LDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFD 554 (588)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999998765 44455689999999999999999999999999999999999
Q ss_pred hHHhhchhHHHHHHHH
Q 000475 805 DLIADQNSELVRQMKA 820 (1470)
Q Consensus 805 ~l~~~~~~~~~~~~~~ 820 (1470)
++.+ .+..+.++...
T Consensus 555 ~l~~-~~~~y~~l~~~ 569 (588)
T PRK13657 555 ELVA-RGGRFAALLRA 569 (588)
T ss_pred HHHH-CCChHHHHHHH
Confidence 9987 45666666553
No 63
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=3.1e-60 Score=605.68 Aligned_cols=541 Identities=19% Similarity=0.260 Sum_probs=418.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 266 PQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRI 345 (1470)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~ 345 (1470)
++.+++.+++.+.+..++.++..++.++.|+++..+++.+-...+ ... ...+++.+++..++..+......+...++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (576)
T TIGR02204 9 LWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS-SGL--LNRYFAFLLVVALVLALGTAARFYLVTWL 85 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc-HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556677778888888889999999999999999997432221 111 11122222233333344444455667788
Q ss_pred HHHHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 000475 346 GIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAA 421 (1470)
Q Consensus 346 g~rir~~L~~~iy~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~ 421 (1470)
+.++...+...+|+|.++.+.. ..+.|+++|.+++|++.+.+++. .+..++...+.+++++++++..-. +.+++.
T Consensus 86 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~ 164 (576)
T TIGR02204 86 GERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSP-KLTSLV 164 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHH
Confidence 9999999999999999987543 34889999999999999988764 344444444444444444433222 444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 422 LFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAI 501 (1470)
Q Consensus 422 l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~ 501 (1470)
++.+++.+.+...+.+..++..++.++..+++.+...|.++|+++||.+++|+.+.+++++..++..+...+........
T Consensus 165 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 165 LLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444455667888888899999999999999999999999999999999988888877554444333322222221
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC-C
Q 000475 502 AFLF--WASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKK-P 578 (1470)
Q Consensus 502 ~~~~--~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~-~ 578 (1470)
..+. ......+.++.++++.+..+.++.+.++++..++..+..|+..++..+..+.+++++++|+.++++.+++.+ .
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 1111 111223444556777778889999999999999999999999999999999999999999999998654211 1
Q ss_pred CCC-CCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEE
Q 000475 579 ITE-PTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIK 656 (1470)
Q Consensus 579 ~~~-~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~ 656 (1470)
... .........|+++|++|+|+++ ...+.+++ ||+++|||+++|+|+||||||||+++|+|+++|.+|++ .
T Consensus 325 ~~~~~~~~~~~~~i~~~~v~f~y~~~-----~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I-~ 398 (576)
T TIGR02204 325 AHPKTLPVPLRGEIEFEQVNFAYPAR-----PDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRI-L 398 (576)
T ss_pred CCCccCCcCCCceEEEEEEEEECCCC-----CCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEE-E
Confidence 111 1111123469999999999854 22578999 99999999999999999999999999999999999986 7
Q ss_pred ECC-------------EeEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCc
Q 000475 657 VHG-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1470)
Q Consensus 657 ~~g-------------~~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LS 722 (1470)
++| .++||||+|++|++||+|||.+|.+ .++++.+++++.+++.++++.+|+|.+|.+|++|.+||
T Consensus 399 i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LS 478 (576)
T TIGR02204 399 LDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLS 478 (576)
T ss_pred ECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCC
Confidence 877 4799999999999999999999875 46778889999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecC
Q 000475 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGK 802 (1470)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~ 802 (1470)
||||||++||||++++|++++||||||+||+++++.+++ .+....+++|+|+|||+++.++.+|+|++|++|++++.|+
T Consensus 479 gGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~-~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~ 557 (576)
T TIGR02204 479 GGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQ-ALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGT 557 (576)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHH-HHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeec
Confidence 999999999999999999999999999999999887765 4555667899999999999999999999999999999999
Q ss_pred hhhHHhhchhHHHHHH
Q 000475 803 YEDLIADQNSELVRQM 818 (1470)
Q Consensus 803 ~~~l~~~~~~~~~~~~ 818 (1470)
++++.+ ++..+.++.
T Consensus 558 ~~~l~~-~~~~~~~l~ 572 (576)
T TIGR02204 558 HAELIA-KGGLYARLA 572 (576)
T ss_pred HHHHHH-cCChHHHHH
Confidence 999887 555555443
No 64
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.8e-60 Score=601.15 Aligned_cols=500 Identities=17% Similarity=0.195 Sum_probs=382.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 268 VIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGI 347 (1470)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~ 347 (1470)
..++.+++.++...++.++..++..+.|++++.+++.+..... ... -+.+..++++..++..+......+...+.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (529)
T TIGR02868 6 PLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP--VLY-LSVAAVAVRAFGIGRAVFRYLERLVGHDAAL 82 (529)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch--hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667777778888888899999999999999987653221 111 0111111112223333433334445667788
Q ss_pred HHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 000475 348 RVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLYIH-RIWLLPVQVFLALVILYKNLGAAPAFAALF 423 (1470)
Q Consensus 348 rir~~L~~~iy~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~~~~-~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~ 423 (1470)
++...+...+|+|.++++.. ..++|+++|.+++|++++.+.+.... .+....+.+++++++++ .++|..+++.++
T Consensus 83 ~~~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~l~l~~l~ 161 (529)
T TIGR02868 83 RSLGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIA-LLSVPAALVLAA 161 (529)
T ss_pred HHHHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHH
Confidence 88899999999999988764 33899999999999999998876433 34444444444444443 334355555544
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 424 STIFVMVSNTPL-ANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIA 502 (1470)
Q Consensus 424 ~~~i~~~~~~~~-~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~ 502 (1470)
.++++..+...+ .+..++..++..+..++..+...|.++|+++||.|++|+.+.+++++..++..+...+.....+...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (529)
T TIGR02868 162 GLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGA 241 (529)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444443333333 3444556677778889999999999999999999999999999998876655554444444333333
Q ss_pred HHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 000475 503 FLFWASP--TLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPIT 580 (1470)
Q Consensus 503 ~~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~ 580 (1470)
.+..... ..+.++.++.+.+.++.++.+.+.+++.+...+..|+..++..+..+.++++|.+|+.++++.+++.+...
T Consensus 242 ~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~ 321 (529)
T TIGR02868 242 AAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGV 321 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCC
Confidence 2222222 22334456777778889999999999999999999999999999999999999999999997665211111
Q ss_pred -C--CCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEE
Q 000475 581 -E--PTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIK 656 (1470)
Q Consensus 581 -~--~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~ 656 (1470)
. .+.......|+++|++|+|+++ ++.|+| ||++++||+++|+||+|||||||+++|+|+++|++|++ .
T Consensus 322 ~~~~~~~~~~~~~I~~~~vsf~Y~~~-------~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I-~ 393 (529)
T TIGR02868 322 VPAAGALGLGKPTLELRDLSFGYPGS-------PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEV-T 393 (529)
T ss_pred CCCCcccCCCCceEEEEEEEEecCCC-------CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE-E
Confidence 0 0011123469999999999753 358999 99999999999999999999999999999999999996 8
Q ss_pred ECC------------EeEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCch
Q 000475 657 VHG------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1470)
Q Consensus 657 ~~g------------~~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 723 (1470)
++| .++||||+|++|++||+|||.+|.+ .++++++++++.|+++++++.+|+|.+|.+||+|.+|||
T Consensus 394 i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 473 (529)
T TIGR02868 394 LDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSG 473 (529)
T ss_pred ECCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCH
Confidence 888 6899999999999999999999865 578899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCc
Q 000475 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQL 780 (1470)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~ 780 (1470)
|||||++||||++++|+|++|||||||||+++++.+.+. +....+++|+|+|||++
T Consensus 474 GQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~-l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 474 GERQRLALARALLADAPILLLDEPTEHLDAGTESELLED-LLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHhcCCCEEEEEecCC
Confidence 999999999999999999999999999999999998775 44566789999999985
No 65
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.9e-60 Score=600.21 Aligned_cols=521 Identities=20% Similarity=0.231 Sum_probs=410.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 271 HAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVR 350 (1470)
Q Consensus 271 ~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~rir 350 (1470)
+.+++.++...++.++..++..+.|++++.+++.+-.... ... .+.+++++++..++..++.....+...+++.++.
T Consensus 2 ~~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~--~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (544)
T TIGR01842 2 SKNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS--VPT-LLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLD 78 (544)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc--hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777788888888899999999999999986643221 111 2334445555556666666666777888999999
Q ss_pred HHHHHHHHHHhcccccCCCCHHHHHHHHHHhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 000475 351 SALTVLIYKRSMAIKFAGPSSGIIINMINVDVERIGDFFLY--IHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFV 428 (1470)
Q Consensus 351 ~~L~~~iy~K~L~ls~~~~~~G~ivnlms~D~~~i~~~~~~--~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i~ 428 (1470)
..+...+|+|.++++.. ..+...+.+++|++++.+++.. +..+...++.++..+ +++. +.|+.+++.+++++++
T Consensus 79 ~~lr~~~~~~ll~~~~~--~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~-~~~~l~li~l~~~~l~ 154 (544)
T TIGR01842 79 GALNQPIFAASFSATLR--RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLL-VCFL-LHPWIGILALGGAVVL 154 (544)
T ss_pred HHHHHHHHHHHhcCccc--CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHHH-HhhHHHHHHHHHHHHH
Confidence 99999999999988763 3456678889999999987653 333444444433332 2332 2224444444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 429 MVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWAS 508 (1470)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~ 508 (1470)
+.+...+.+..++..++.++..+++.+.+.|.++|+++||.|++|+.+.+++++..++..+...+.....+....+....
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556667777888889999999999999999999999999999999999988776655544443333333322222111
Q ss_pred H--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 000475 509 P--TLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEPTSKA 586 (1470)
Q Consensus 509 p--~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~ 586 (1470)
. ..+.+++++.+.+.++.+|++.+++++.++..+..|+..++..+..+.+++++.+|+.++++.+++.+.... ...
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~--~~~ 312 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAMP--LPE 312 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCC--CCC
Confidence 1 223455678888888999999999999999999999999999999999999999999999976553221111 111
Q ss_pred CCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC------
Q 000475 587 SDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------ 659 (1470)
Q Consensus 587 ~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------ 659 (1470)
.+..++++|++|+|+++ ..+.+++ |+++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 313 ~~~~i~~~~v~~~y~~~------~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i-~~~g~~i~~~ 385 (544)
T TIGR01842 313 PEGHLSVENVTIVPPGG------KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSV-RLDGADLKQW 385 (544)
T ss_pred CCCeEEEEEEEEEcCCC------CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEehhhC
Confidence 23469999999999753 2467899 99999999999999999999999999999999999986 7776
Q ss_pred -------EeEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHH
Q 000475 660 -------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQL 731 (1470)
Q Consensus 660 -------~~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 731 (1470)
.++||||+|+++++|++|||.++.+ .+++++.++++.+++++.++.+|+|.+|.+|++|.+||||||||++|
T Consensus 386 ~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~l 465 (544)
T TIGR01842 386 DRETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIAL 465 (544)
T ss_pred CHHHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHH
Confidence 3799999999999999999996654 67888889999999999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHHh
Q 000475 732 ARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIA 808 (1470)
Q Consensus 732 ARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 808 (1470)
|||++++|+++|||||||+||+++++.+.+. +.... +++|+|++||+++.+..||+|++|++|++++.|+++++.+
T Consensus 466 ARall~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 466 ARALYGDPKLVVLDEPNSNLDEEGEQALANA-IKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred HHHHhcCCCEEEEeCCccccCHHHHHHHHHH-HHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999999998888764 44443 6899999999999888899999999999999999988864
No 66
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-63 Score=615.19 Aligned_cols=430 Identities=21% Similarity=0.333 Sum_probs=324.3
Q ss_pred eeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC-------------
Q 000475 594 EAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------------- 659 (1470)
Q Consensus 594 ~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------------- 659 (1470)
+|++++|++ .+.+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 2 ~nl~~~~~~--------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~~~~~ 72 (491)
T PRK10982 2 SNISKSFPG--------VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSI-LFQGKEIDFKSSKEALE 72 (491)
T ss_pred CceEEEeCC--------EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEE-EECCEECCCCCHHHHHh
Confidence 577888853 357888 99999999999999999999999999999999999986 6665
Q ss_pred -EeEEEcCCCCCC-CccHHHHHhcCCC-C-----CHHH----HHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHH
Q 000475 660 -KKAYVPQSSWIQ-TGTIRENILFGKD-M-----RQSF----YEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQ 727 (1470)
Q Consensus 660 -~~ayv~Q~~~i~-~~Ti~eNI~~g~~-~-----~~~~----y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 727 (1470)
.++|++|++.++ +.|++||+.++.. . +.+. .+++++.+++ ......+..+|||||||
T Consensus 73 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgGq~q 141 (491)
T PRK10982 73 NGISMVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDI-----------DIDPRAKVATLSVSQMQ 141 (491)
T ss_pred CCEEEEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCC-----------CCCccCchhhCCHHHHH
Confidence 379999998764 5699999998642 1 1111 1222222222 12234567899999999
Q ss_pred HHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhh
Q 000475 728 RIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYED 805 (1470)
Q Consensus 728 Rv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 805 (1470)
||+||||++.+|+++||||||++||+.+...+.+. +..+ .+++|+|++||+++++.. ||+|++|++|++++.|+.++
T Consensus 142 rv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 220 (491)
T PRK10982 142 MIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTI-IRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAG 220 (491)
T ss_pred HHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhh
Confidence 99999999999999999999999999998888764 4443 357899999999999865 99999999999987765433
Q ss_pred HHhhchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCccchhhcCcchHHHHHHHHH
Q 000475 806 LIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYSAFIT 885 (1470)
Q Consensus 806 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~ 885 (1470)
+... + ...
T Consensus 221 ~~~~----------------------------------------~--------------------------------~~~ 228 (491)
T PRK10982 221 LTMD----------------------------------------K--------------------------------IIA 228 (491)
T ss_pred CCHH----------------------------------------H--------------------------------HHH
Confidence 2100 0 000
Q ss_pred HhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 886 LVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLN 965 (1470)
Q Consensus 886 ~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ 965 (1470)
T Consensus 229 -------------------------------------------------------------------------------- 228 (491)
T PRK10982 229 -------------------------------------------------------------------------------- 228 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 000475 966 MITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQV 1045 (1470)
Q Consensus 966 l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~ 1045 (1470)
T Consensus 229 -------------------------------------------------------------------------------- 228 (491)
T PRK10982 229 -------------------------------------------------------------------------------- 228 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHH
Q 000475 1046 VNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWL 1125 (1470)
Q Consensus 1046 ~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1125 (1470)
.++ +
T Consensus 229 -----------~~~-----------------------------------~------------------------------ 232 (491)
T PRK10982 229 -----------MMV-----------------------------------G------------------------------ 232 (491)
T ss_pred -----------HHh-----------------------------------C------------------------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCcccc
Q 000475 1126 CLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVI 1205 (1470)
Q Consensus 1126 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~ 1205 (1470)
. . + .+ ..+.+.
T Consensus 233 -----------------------~-~---------------------------------~---~~-----~~~~~~---- 243 (491)
T PRK10982 233 -----------------------R-S---------------------------------L---TQ-----RFPDKE---- 243 (491)
T ss_pred -----------------------C-C---------------------------------c---cc-----cccccc----
Confidence 0 0 0 00 000000
Q ss_pred CCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeC
Q 000475 1206 KNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDI 1285 (1470)
Q Consensus 1206 ~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI 1285 (1470)
.+ +....|+++|++++| ..+|+|+||++++||++||+|+||||||||+++|.|+.+|++|+|.+||.++
T Consensus 244 ---~~----~~~~~i~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i 312 (491)
T PRK10982 244 ---NK----PGEVILEVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKI 312 (491)
T ss_pred ---CC----CCCcEEEEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEEC
Confidence 00 111258999999875 2489999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHH-HhcccEEEccCCC---CCcc-cHHHh-----cCcC----CCCCH----HHHHHHHHHcCcHHHHHhcccccC
Q 000475 1286 SMIGLQD-LRSRLSIIPQDPM---LFQG-TVRTN-----LDPL----EQHSD----QEIWEVINKCHLAEIVRQDQRLLD 1347 (1470)
Q Consensus 1286 ~~i~l~~-LR~~isiIpQdp~---LF~g-TIR~N-----Ldp~----~~~sd----~eI~~aL~~~~L~~~v~~lp~gLd 1347 (1470)
...+..+ +|+.++|+||++. +|.. |+++| +... +..+. +++.+.++..++. .+.+|
T Consensus 313 ~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~~~ 386 (491)
T PRK10982 313 NNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVK------TPGHR 386 (491)
T ss_pred CCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCcc------CCCcc
Confidence 8776544 5788999999963 5653 77666 3211 11121 2234444444432 11234
Q ss_pred ccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEE
Q 000475 1348 APVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVL 1425 (1470)
Q Consensus 1348 t~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIl 1425 (1470)
.++ ..||||||||++||||++++|+||+|||||++||+.+.+.+.+.|++.. ++.|||+|||+++.+.. ||||+
T Consensus 387 ~~~----~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~ 462 (491)
T PRK10982 387 TQI----GSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRIL 462 (491)
T ss_pred ccc----ccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEE
Confidence 444 4699999999999999999999999999999999999999999997743 57999999999999976 99999
Q ss_pred EEeCCEEEEecChhHHh
Q 000475 1426 VLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1426 vL~~G~vvE~g~p~~Ll 1442 (1470)
+|++|+++..+++.++.
T Consensus 463 ~l~~g~i~~~~~~~~~~ 479 (491)
T PRK10982 463 VMSNGLVAGIVDTKTTT 479 (491)
T ss_pred EEECCEEEEEEccccCC
Confidence 99999999888775443
No 67
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=5.6e-60 Score=599.75 Aligned_cols=524 Identities=21% Similarity=0.267 Sum_probs=409.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000475 285 GVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTVLIYKRSMAI 364 (1470)
Q Consensus 285 l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~rir~~L~~~iy~K~L~l 364 (1470)
++..++..+.|++++.+++.+..... .... .+.+++.+++..++..++.....+...+.+.++...+...+|+|.+++
T Consensus 5 ~~~~~~~~~~p~~~~~iid~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~ 82 (569)
T PRK10789 5 IIIAMLQLIPPKVVGIIVDGVTEQHM-TTGQ-ILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQ 82 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCc-chhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34555667789999999997754321 1111 233344444444455555544455566788888999999999999987
Q ss_pred ccC---CCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 365 KFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSNTPLANRQE 440 (1470)
Q Consensus 365 s~~---~~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i~~~~~~~~~~~~~ 440 (1470)
+.. ..++|+++|.+++|++.+..... .+..++..++..++++++++..++|..+++.++++++.+.+...+.++..
T Consensus 83 ~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~ 162 (569)
T PRK10789 83 HPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLH 162 (569)
T ss_pred CHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 653 45899999999999999986653 34555555555555555554456756667666666666677777788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q 000475 441 RFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWAS--PTLVSVITFG 518 (1470)
Q Consensus 441 ~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~--p~~v~~~~f~ 518 (1470)
+..++.++..++..+.+.|.++|+++||.|++|+.+.++..+..++..+...+.....+....+.... -..+.++.+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 242 (569)
T PRK10789 163 ERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGG 242 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888999999999999999999999888777654332222222222222211111111 1223345567
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccEEEeeeEE
Q 000475 519 VCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEPTSKASDVAIDIEAGEY 598 (1470)
Q Consensus 519 ~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~~~~~i~~~~~~f 598 (1470)
.+.+.++.++.+.+++++.++..+..|+..++..+..+.+++++.+|+.++++.+++.+.... +....+..|+++|++|
T Consensus 243 ~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~-~~~~~~~~I~~~~v~~ 321 (569)
T PRK10789 243 SWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSE-PVPEGRGELDVNIRQF 321 (569)
T ss_pred HHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCC-CCCCCCCcEEEEEEEE
Confidence 777888999999999999999999999999999999999999999999999986542111111 1111234699999999
Q ss_pred EeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE-------------eEEE
Q 000475 599 AWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------------KAYV 664 (1470)
Q Consensus 599 ~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------------~ayv 664 (1470)
+|+.+ ..+.+++ |+++++|++++|+||||||||||+++|+|+++|++|++ .++|. ++||
T Consensus 322 ~y~~~------~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i-~~~g~~~~~~~~~~~~~~i~~v 394 (569)
T PRK10789 322 TYPQT------DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDI-RFHDIPLTKLQLDSWRSRLAVV 394 (569)
T ss_pred ECCCC------CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEE-EECCEEHhhCCHHHHHhheEEE
Confidence 99753 2467899 99999999999999999999999999999999999996 77763 6999
Q ss_pred cCCCCCCCccHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHccCCCEEE
Q 000475 665 PQSSWIQTGTIRENILFGK-DMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYI 743 (1470)
Q Consensus 665 ~Q~~~i~~~Ti~eNI~~g~-~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~l 743 (1470)
+|+|++|++|++|||.+|. +.++++++++++.+++++++..+|+|.+|.+|++|.+||||||||++||||++++|+++|
T Consensus 395 ~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~ill 474 (569)
T PRK10789 395 SQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILI 474 (569)
T ss_pred ccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999999996 467888899999999999999999999999999999999999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHHhhchhHHHHHHHH
Q 000475 744 FDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQNSELVRQMKA 820 (1470)
Q Consensus 744 LDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 820 (1470)
||||||+||+++++++.+. +....+++|+|+|||+++.++.||+|++|++|++++.|+++++.+ ....+.++...
T Consensus 475 lDEpts~LD~~~~~~i~~~-l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~-~~~~y~~l~~~ 549 (569)
T PRK10789 475 LDDALSAVDGRTEHQILHN-LRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQ-QSGWYRDMYRY 549 (569)
T ss_pred EECccccCCHHHHHHHHHH-HHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHH-cCChHHHHHHH
Confidence 9999999999999988765 555567899999999999999999999999999999999999987 45556665543
No 68
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7.1e-62 Score=614.43 Aligned_cols=203 Identities=21% Similarity=0.287 Sum_probs=167.6
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
..|+++|++++|.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+++ + .++
T Consensus 323 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~----------~~i 389 (556)
T PRK11819 323 KVIEAENLSKSFGD--RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-T----------VKL 389 (556)
T ss_pred eEEEEEeEEEEECC--eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-c----------eEE
Confidence 35999999999964 3599999999999999999999999999999999999999999999964 2 169
Q ss_pred EEEccCC-CCCcc-cHHHhcCcCCC-----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1298 SIIPQDP-MLFQG-TVRTNLDPLEQ-----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1298 siIpQdp-~LF~g-TIR~NLdp~~~-----~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
+|+||++ .++.. |+++|+..... ..+++..++++..++.+. .++.++ ..||||||||++||||
T Consensus 390 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~----~~LSgG~~qrv~la~a 459 (556)
T PRK11819 390 AYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGG------DQQKKV----GVLSGGERNRLHLAKT 459 (556)
T ss_pred EEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChh------HhcCch----hhCCHHHHHHHHHHHH
Confidence 9999997 56654 99999863211 123345566777666321 123333 4699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeC-CEEEE-ecChhHHhhcC
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDE-GKVLE-YDSPRQLLEDN 1445 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~-G~vvE-~g~p~~Ll~~~ 1445 (1470)
++.+|++|||||||++||+.+...+.+.|++. + .|||+|||+++.+.. ||+|++|++ |++.+ .|++.++++++
T Consensus 460 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~~ 535 (556)
T PRK11819 460 LKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEEDK 535 (556)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHHH
Confidence 99999999999999999999999999999875 3 499999999999876 999999996 88875 67787777653
No 69
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=9.9e-60 Score=597.62 Aligned_cols=537 Identities=20% Similarity=0.248 Sum_probs=407.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 269 IIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLS-GKHDH-SSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIG 346 (1470)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~-~~~~~-~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g 346 (1470)
.++.+++.+++..++.++..++....|.++..+++... ..... .... .+..++++++..++..++.....+...+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFN-YMLPAAGVRGAAIGRTAGRYGERLVSHDAT 88 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777888888888999999999999999998542 21100 0011 111122233333444455444556677888
Q ss_pred HHHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 000475 347 IRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVILYKNLGAAPAFAAL 422 (1470)
Q Consensus 347 ~rir~~L~~~iy~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~~-~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l 422 (1470)
.++...+...+|+|.++++.. ..++|++++.+++|++++.+++.. +..+....+.+++++++++ .+.|..+++.+
T Consensus 89 ~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~l~l~~~ 167 (574)
T PRK11160 89 FRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLS-FFDLTLALTLG 167 (574)
T ss_pred HHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 999999999999999988653 348999999999999999998754 3444444445544444443 23334444443
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 423 FSTIFVM-VSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAI 501 (1470)
Q Consensus 423 ~~~~i~~-~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~ 501 (1470)
+++++.. .+...+.++.++..++..+..++..+.+.|.++|+++||.|+.|+.+.+++++..++-.+...+.....+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (574)
T PRK11160 168 GILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLS 247 (574)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333322 234556677788888888899999999999999999999999999988888777544433333333332222
Q ss_pred HHHHHH-HH-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 000475 502 AFLFWA-SP-TLVSVITFGVCILLKTPLTSGAVLSALATFRI-LQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKP 578 (1470)
Q Consensus 502 ~~~~~~-~p-~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~-l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~ 578 (1470)
..+... .. ..+.++.++.+. .++.++.+..++++.+... ...|+..++..+..+.++++|.+||.++++.++..+.
T Consensus 248 ~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~ 326 (574)
T PRK11160 248 QALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTF 326 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 222111 11 122334455555 4677899988887766544 4568889999999999999999999999987642111
Q ss_pred CCCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEE
Q 000475 579 ITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKV 657 (1470)
Q Consensus 579 ~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~ 657 (1470)
............|+++|++|+|+++ ..+.|+| ||++++||+++|+||||||||||+++|+|+++|++|++ .+
T Consensus 327 ~~~~~~~~~~~~i~~~~v~f~y~~~------~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I-~i 399 (574)
T PRK11160 327 PTTSTAAADQVSLTLNNVSFTYPDQ------PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEI-LL 399 (574)
T ss_pred CcccCCCCCCCeEEEEEEEEECCCC------CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-EE
Confidence 1111111223569999999999753 2468999 99999999999999999999999999999999999996 78
Q ss_pred CCE-------------eEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCch
Q 000475 658 HGK-------------KAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1470)
Q Consensus 658 ~g~-------------~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 723 (1470)
+|. ++||+|+|++|++||+|||.+|.+ .++++..++++.++++++++. |+|.+|.+||+|.+|||
T Consensus 400 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSg 478 (574)
T PRK11160 400 NGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSG 478 (574)
T ss_pred CCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCH
Confidence 773 699999999999999999999875 577888999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecCh
Q 000475 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKY 803 (1470)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~ 803 (1470)
|||||++||||++++|++++||||||+||+++++.+.+. +....+++|+|+|||+++.++.||+|++|++|++++.|++
T Consensus 479 GqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~-l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~ 557 (574)
T PRK11160 479 GEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILEL-LAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTH 557 (574)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCH
Confidence 999999999999999999999999999999998888764 5556678999999999999999999999999999999999
Q ss_pred hhHHhhchhHHHHHH
Q 000475 804 EDLIADQNSELVRQM 818 (1470)
Q Consensus 804 ~~l~~~~~~~~~~~~ 818 (1470)
+|+++ .+..+.++.
T Consensus 558 ~~l~~-~~g~y~~l~ 571 (574)
T PRK11160 558 QELLA-QQGRYYQLK 571 (574)
T ss_pred HHHHh-cCcHHHHHH
Confidence 99987 555555543
No 70
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1e-61 Score=613.06 Aligned_cols=481 Identities=22% Similarity=0.310 Sum_probs=332.2
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEEC--CEeEEEcC
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVH--GKKAYVPQ 666 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~--g~~ayv~Q 666 (1470)
.++++|++++|+++ .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++ ..++||+|
T Consensus 4 ~i~~~nls~~~~~~-------~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i-~~~~~~~i~~v~Q 75 (552)
T TIGR03719 4 IYTMNRVSKVVPPK-------KEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEA-RPAPGIKVGYLPQ 75 (552)
T ss_pred EEEEeeEEEecCCC-------CeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EecCCCEEEEEec
Confidence 58899999999622 357889 99999999999999999999999999999999999997 665 46999999
Q ss_pred CCCCC-CccHHHHHhcCCCC------------------CH---------HHHHHHHHHhcch---HHHHhcc-CCCcccc
Q 000475 667 SSWIQ-TGTIRENILFGKDM------------------RQ---------SFYEEVLEGCALN---QDIEMWA-DGDLSVV 714 (1470)
Q Consensus 667 ~~~i~-~~Ti~eNI~~g~~~------------------~~---------~~y~~v~~~~~l~---~d~~~l~-~g~~t~i 714 (1470)
+|+++ +.|++|||.++... +. .++.++++.++.. ..++.+- .-.....
T Consensus 76 ~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 155 (552)
T TIGR03719 76 EPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCPPW 155 (552)
T ss_pred cCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCCcc
Confidence 99886 46999999876310 01 1223334444422 1111110 0011123
Q ss_pred cCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEe
Q 000475 715 GERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMK 793 (1470)
Q Consensus 715 g~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~ 793 (1470)
+....+|||||||||+||||++.+|+++||||||++||+++...+.+ .+... ++|+|+|||+++++.. ||+|++|+
T Consensus 156 ~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~-~L~~~--~~tvIiisHd~~~~~~~~d~v~~l~ 232 (552)
T TIGR03719 156 DADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQ-HLQEY--PGTVVAVTHDRYFLDNVAGWILELD 232 (552)
T ss_pred cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHH-HHHhC--CCeEEEEeCCHHHHHhhcCeEEEEE
Confidence 56778999999999999999999999999999999999999887765 45544 4699999999999876 99999999
Q ss_pred CCEEE-EecChhhHHhhchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCccchhhc
Q 000475 794 DGKIE-QSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTEL 872 (1470)
Q Consensus 794 ~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 872 (1470)
+|+++ +.|+++++.+...............
T Consensus 233 ~g~i~~~~g~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------- 263 (552)
T TIGR03719 233 RGRGIPWEGNYSSWLEQKEKRLEQEEKEESA------------------------------------------------- 263 (552)
T ss_pred CCEEEEecCCHHHHHHHHHHHHHHHHHHHHH-------------------------------------------------
Confidence 99975 7899988865211111000000000
Q ss_pred CcchHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHHH
Q 000475 873 GRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLA 952 (1470)
Q Consensus 873 g~v~~~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~ 952 (1470)
+...+... .-|+
T Consensus 264 -------~~~~~~~~-----------------------~~~~-------------------------------------- 275 (552)
T TIGR03719 264 -------RQKALKRE-----------------------LEWV-------------------------------------- 275 (552)
T ss_pred -------HHHHHHHH-----------------------HHHH--------------------------------------
Confidence 00000000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000475 953 TIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPL 1032 (1470)
Q Consensus 953 ~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1032 (1470)
T Consensus 276 -------------------------------------------------------------------------------- 275 (552)
T TIGR03719 276 -------------------------------------------------------------------------------- 275 (552)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHH
Q 000475 1033 FLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYS 1112 (1470)
Q Consensus 1033 ~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~ 1112 (1470)
. +. ...++ + +.
T Consensus 276 -----------~------------~~--~~~~~---------------------------~---------~~-------- 286 (552)
T TIGR03719 276 -----------R------------SS--PKARQ---------------------------A---------KS-------- 286 (552)
T ss_pred -----------H------------hh--hhhHH---------------------------H---------HH--------
Confidence 0 00 00000 0 00
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 000475 1113 CVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERIL 1192 (1470)
Q Consensus 1113 ~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~ 1192 (1470)
+......++..
T Consensus 287 ---------------------------------------------------------------------~~~~~~~~~~~ 297 (552)
T TIGR03719 287 ---------------------------------------------------------------------KARLARYEELL 297 (552)
T ss_pred ---------------------------------------------------------------------HHHHHHHHhhh
Confidence 00000001111
Q ss_pred HHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC
Q 000475 1193 QFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE 1272 (1470)
Q Consensus 1193 ~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~ 1272 (1470)
+. . ++..+.......+...-+....|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+
T Consensus 298 ~~-~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~ 373 (552)
T TIGR03719 298 SQ-E-FQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGD--KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ 373 (552)
T ss_pred hh-c-ccccCCCceeecCCCCCCCCeEEEEeeEEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC
Confidence 00 0 0000000000000000011235999999999964 359999999999999999999999999999999999999
Q ss_pred CCCcEEEEcCEeCCCCCHHHHhcccEEEccCCC-CCc-ccHHHhcCcCC---CC--CHHHHHHHHHHcCcHHHHHhcccc
Q 000475 1273 PSGGRILIDGVDISMIGLQDLRSRLSIIPQDPM-LFQ-GTVRTNLDPLE---QH--SDQEIWEVINKCHLAEIVRQDQRL 1345 (1470)
Q Consensus 1273 p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~-LF~-gTIR~NLdp~~---~~--sd~eI~~aL~~~~L~~~v~~lp~g 1345 (1470)
|++|+|.+++ ++ +++|+||++. ++. -|+++|+.... .. .+.+..++++..++.+. -
T Consensus 374 p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~ 436 (552)
T TIGR03719 374 PDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGS------D 436 (552)
T ss_pred CCCeEEEECC-ce----------EEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChh------H
Confidence 9999999965 21 6999999973 564 49999996421 11 13344566666665321 1
Q ss_pred cCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEE
Q 000475 1346 LDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLV 1424 (1470)
Q Consensus 1346 Ldt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrI 1424 (1470)
.|.++ ..||||||||++|||||+.+|++|+|||||++||+.+...+.+.|++. . .|||+|||+++.+.. ||+|
T Consensus 437 ~~~~~----~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~d~i 510 (552)
T TIGR03719 437 QQKKV----GQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIATHI 510 (552)
T ss_pred hcCch----hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhCCEE
Confidence 23333 469999999999999999999999999999999999999999999986 3 489999999999876 9999
Q ss_pred EEEeC-CEEEEe-cChhHHhh
Q 000475 1425 LVLDE-GKVLEY-DSPRQLLE 1443 (1470)
Q Consensus 1425 lvL~~-G~vvE~-g~p~~Ll~ 1443 (1470)
++|++ |+++++ |++.++.+
T Consensus 511 ~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 511 LAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred EEEECCCeEEEeCCCHHHHHH
Confidence 99997 688754 66666554
No 71
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.1e-62 Score=614.96 Aligned_cols=439 Identities=21% Similarity=0.295 Sum_probs=330.7
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+.. ..+++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 3 ~l~~~~l~~~~~~~--------~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i-~~~~~~~~~~~~~ 73 (490)
T PRK10938 3 SLQISQGTFRLSDT--------KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGER-QSQFSHITRLSFE 73 (490)
T ss_pred eEEEEeEEEEcCCe--------eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceE-EECCcccccCCHH
Confidence 37899999999632 47889 99999999999999999999999999999999999986 5544
Q ss_pred ----EeEEEcCCCCC---------CCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHH
Q 000475 660 ----KKAYVPQSSWI---------QTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1470)
Q Consensus 660 ----~~ayv~Q~~~i---------~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 726 (1470)
.++|++|++.. +..|++||+.++.+ +.++.+++++..++.+. .+....+||||||
T Consensus 74 ~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~ 141 (490)
T PRK10938 74 QLQKLVSDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITAL-----------LDRRFKYLSTGET 141 (490)
T ss_pred HHHHHhceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhh-----------hhCCcccCCHHHH
Confidence 16899998643 14599999876532 23445556666655432 2356679999999
Q ss_pred HHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChh
Q 000475 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYE 804 (1470)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 804 (1470)
||++||||++.+|+++||||||++||+.....+.+. +..+ .+++|+|++||+++++.. ||+|++|++|+++..|+++
T Consensus 142 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~ 220 (490)
T PRK10938 142 RKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAEL-LASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGERE 220 (490)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999998888764 4443 347899999999999875 9999999999999888766
Q ss_pred hHHhhchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCccchhhcCcchHHHHHHHH
Q 000475 805 DLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYSAFI 884 (1470)
Q Consensus 805 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~ 884 (1470)
++.... ....... .+ . +
T Consensus 221 ~~~~~~--~~~~~~~-----------------------------~~----~--------~-------------------- 237 (490)
T PRK10938 221 EILQQA--LVAQLAH-----------------------------SE----Q--------L-------------------- 237 (490)
T ss_pred HHhcch--hhhhhhh-----------------------------hh----c--------c--------------------
Confidence 543200 0000000 00 0 0
Q ss_pred HHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 885 TLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFL 964 (1470)
Q Consensus 885 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~ 964 (1470)
. ..
T Consensus 238 ---------------------------------~-~~------------------------------------------- 240 (490)
T PRK10938 238 ---------------------------------E-GV------------------------------------------- 240 (490)
T ss_pred ---------------------------------C-cc-------------------------------------------
Confidence 0 00
Q ss_pred HHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000475 965 NMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQ 1044 (1470)
Q Consensus 965 ~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~ 1044 (1470)
+
T Consensus 241 ---------~---------------------------------------------------------------------- 241 (490)
T PRK10938 241 ---------Q---------------------------------------------------------------------- 241 (490)
T ss_pred ---------c----------------------------------------------------------------------
Confidence 0
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHH
Q 000475 1045 VVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEW 1124 (1470)
Q Consensus 1045 ~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1124 (1470)
T Consensus 242 -------------------------------------------------------------------------------- 241 (490)
T PRK10938 242 -------------------------------------------------------------------------------- 241 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccc
Q 000475 1125 LCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLV 1204 (1470)
Q Consensus 1125 l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~ 1204 (1470)
.+. ..+...
T Consensus 242 ----------------------~~~------------------------------------------------~~~~~~- 250 (490)
T PRK10938 242 ----------------------LPE------------------------------------------------PDEPSA- 250 (490)
T ss_pred ----------------------cCc------------------------------------------------cccccc-
Confidence 000 000000
Q ss_pred cCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-CCcEEEEcCE
Q 000475 1205 IKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-SGGRILIDGV 1283 (1470)
Q Consensus 1205 ~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-~~G~I~IDG~ 1283 (1470)
.. ..+ +....|+++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.++|.
T Consensus 251 -~~-~~~---~~~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~ 323 (490)
T PRK10938 251 -RH-ALP---ANEPRIVLNNGVVSYND--RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGR 323 (490)
T ss_pred -cc-ccC---CCCceEEEeceEEEECC--eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecc
Confidence 00 000 01225999999999964 3599999999999999999999999999999999998875 6999999998
Q ss_pred eCCC-CCHHHHhcccEEEccCCCCCc---ccHHHhcCcC--------CCCC---HHHHHHHHHHcCcHHHHHhcccccCc
Q 000475 1284 DISM-IGLQDLRSRLSIIPQDPMLFQ---GTVRTNLDPL--------EQHS---DQEIWEVINKCHLAEIVRQDQRLLDA 1348 (1470)
Q Consensus 1284 dI~~-i~l~~LR~~isiIpQdp~LF~---gTIR~NLdp~--------~~~s---d~eI~~aL~~~~L~~~v~~lp~gLdt 1348 (1470)
++.. ......|++++++||++.++. .|+++++... .... ++++.++++.+++.+. -+|.
T Consensus 324 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~ 397 (490)
T PRK10938 324 RRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKR------TADA 397 (490)
T ss_pred cCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchh------hccC
Confidence 7642 233457889999999986542 4777776421 1111 2356677888777531 1233
Q ss_pred cccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-C-cEEEEEecChhhhhh--cCEE
Q 000475 1349 PVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS-R-CTVITVAHRIPTVID--NDLV 1424 (1470)
Q Consensus 1349 ~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~-~-~TVI~IAHRl~ti~~--~DrI 1424 (1470)
++ ..||||||||++|||||+++|++|+|||||++||+.+...+.+.|++..+ + +|||+|+|+++.+.. ||+|
T Consensus 398 ~~----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v 473 (490)
T PRK10938 398 PF----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRL 473 (490)
T ss_pred ch----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeE
Confidence 33 46999999999999999999999999999999999999999999988643 3 579999999999974 7999
Q ss_pred EEEeCCEEEEecC
Q 000475 1425 LVLDEGKVLEYDS 1437 (1470)
Q Consensus 1425 lvL~~G~vvE~g~ 1437 (1470)
++|++|++++.-+
T Consensus 474 ~~l~~G~i~~~~~ 486 (490)
T PRK10938 474 EFVPDGDIYRYVQ 486 (490)
T ss_pred EEecCCceEEeec
Confidence 9999999988754
No 72
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=4.6e-60 Score=598.31 Aligned_cols=469 Identities=17% Similarity=0.195 Sum_probs=354.2
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHH
Q 000475 935 FLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQ 1014 (1470)
Q Consensus 935 ~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~ 1014 (1470)
++.++..++.++..++....+.+...+++.++++++++.|++||++.++|++++|+++|++.+...+. .+..++.+++.
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~ 134 (547)
T PRK10522 56 GLLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIIL 134 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHH
Confidence 33333445566777888889999999999999999999999999999999999999999999987654 46677788888
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhh
Q 000475 1015 LLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCF 1094 (1470)
Q Consensus 1015 ~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf 1094 (1470)
+++.+++++.++|.+.++++..+++.+++. .+..+..+...+......+...+++.|.++|+.+++ +
T Consensus 135 ~i~~~~~l~~~~~~l~li~l~~~~~~~~i~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~ 201 (547)
T PRK10522 135 TLGSAAYLAWLSPKMLLVTAIWMAVTIWGG------------FVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-L 201 (547)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-c
Confidence 888888899999998877665554443322 222222233333334556778899999999999995 4
Q ss_pred chH---HHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHH-HHHHHHHHhh-cCCCcCHHHHHHHHHHHHHHHH
Q 000475 1095 NQE---NRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAF-FLVLIILVTL-PRSAIDPSLAGLAATYGLNLNV 1169 (1470)
Q Consensus 1095 ~~e---~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~-~~~~~~~~~~-~~~~~~~~~~gl~l~y~l~l~~ 1169 (1470)
+.+ +.+.+++.+..++..+...... ++......+..++. .+.+++++.. ..+....+..+....+.+.+..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (547)
T PRK10522 202 NRERAEYVFENEYEPDAQEYRHHIIRAD----TFHLSAVNWSNIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRT 277 (547)
T ss_pred cHHHHHHHHHHHHhHHHHHHHhhhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHH
Confidence 443 3556666666665554333322 11111111111111 1111111111 0111223333333344444556
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcE
Q 000475 1170 LQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKK 1249 (1470)
Q Consensus 1170 ~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~Gek 1249 (1470)
.+..+...+.++.....+.+|+.++.+.|.|.+. +...+. |..+.|+++||+|+|+++ +++|+|+||+|++||+
T Consensus 278 pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~--~~~~~~---~~~~~i~~~~v~f~y~~~-~~~l~~i~~~i~~G~~ 351 (547)
T PRK10522 278 PLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEF--PRPQAF---PDWQTLELRNVTFAYQDN-GFSVGPINLTIKRGEL 351 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc--cccccc---CcCceEEEEEEEEEeCCC-CeEEecceEEEcCCCE
Confidence 6777788888899999999999998765543211 111111 223579999999999743 4699999999999999
Q ss_pred EEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcCCCCCHHHHHHH
Q 000475 1250 IGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEV 1329 (1470)
Q Consensus 1250 vgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~a 1329 (1470)
+||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++++||||.+|+||+++| ....+|++++++
T Consensus 352 ~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~ 428 (547)
T PRK10522 352 LFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKW 428 (547)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999 245788899999
Q ss_pred HHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcE
Q 000475 1330 INKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCT 1407 (1470)
Q Consensus 1330 L~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~T 1407 (1470)
++++++.+.+.. ++|. .+|.+||||||||++||||++++|+||+||||||+||++|++.|.+.+.+.. +++|
T Consensus 429 ~~~~~l~~~~~~-~~~~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~t 502 (547)
T PRK10522 429 LERLKMAHKLEL-EDGR-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKT 502 (547)
T ss_pred HHHcCCchhhhc-cccC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCE
Confidence 999998877653 4332 2478999999999999999999999999999999999999999999987654 4899
Q ss_pred EEEEecChhhhhhcCEEEEEeCCEEEEec
Q 000475 1408 VITVAHRIPTVIDNDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1408 VI~IAHRl~ti~~~DrIlvL~~G~vvE~g 1436 (1470)
+|+||||++++..||+|++|++|+++|.+
T Consensus 503 vi~itH~~~~~~~~d~i~~l~~G~i~e~~ 531 (547)
T PRK10522 503 IFAISHDDHYFIHADRLLEMRNGQLSELT 531 (547)
T ss_pred EEEEEechHHHHhCCEEEEEECCEEEEec
Confidence 99999999999999999999999999983
No 73
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.7e-59 Score=607.17 Aligned_cols=540 Identities=19% Similarity=0.227 Sum_probs=428.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 266 PQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRI 345 (1470)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~ 345 (1470)
++..++.+++.+....+..++..++.++.|++++.+++.+-.... ... -+.+++++++..++..++.....+...++
T Consensus 130 ~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~--~~~-l~~l~~~~~~~~~~~~~~~~l~~~~~~~~ 206 (694)
T TIGR01846 130 FIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG--LST-LSVLALAMLAVAIFEPALGGLRTYLFAHL 206 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455667777788888888888899999999999997653222 111 23334444445555556555556677788
Q ss_pred HHHHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 000475 346 GIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAA 421 (1470)
Q Consensus 346 g~rir~~L~~~iy~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~ 421 (1470)
+.++...+...+|+|.++++.. .+++|+++|.+ +|++.+.+++. .+.......+.+++.+++++. ++|+.+++.
T Consensus 207 ~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~li~ 284 (694)
T TIGR01846 207 TSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFF-YSPTLTGVV 284 (694)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 9999999999999999998653 45999999999 59999998764 333333333333334444443 343666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 422 LFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAI 501 (1470)
Q Consensus 422 l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~ 501 (1470)
++++++...+...+.+..++..++.++..+++.+.+.|.++|+++||.++.|+.+.++..+.-++..+...+.....+..
T Consensus 285 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (694)
T TIGR01846 285 IGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIA 364 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677777778888888888888999999999999999999999999999998888877555444444333333332
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 000475 502 AFLFWASP--TLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPI 579 (1470)
Q Consensus 502 ~~~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~ 579 (1470)
........ ..+.++++|++.+..+.+|.|.++++..+...+..|+..+...+..+.+++++++|+.++++.+++.+..
T Consensus 365 ~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 444 (694)
T TIGR01846 365 GQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA 444 (694)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC
Confidence 22221111 2233466788888888999999999999999999999999999999999999999999999876532211
Q ss_pred CCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEEC
Q 000475 580 TEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVH 658 (1470)
Q Consensus 580 ~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~ 658 (1470)
........+..|+++|++|+|+++ ..+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++
T Consensus 445 ~~~~~~~~~~~i~~~~vsf~y~~~------~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I-~id 517 (694)
T TIGR01846 445 GLAALPELRGAITFENIRFRYAPD------SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQV-LVD 517 (694)
T ss_pred CCCCCCCCCCeEEEEEEEEEcCCC------CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-EEC
Confidence 111112223569999999999754 2467999 99999999999999999999999999999999999996 888
Q ss_pred CE-------------eEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchH
Q 000475 659 GK-------------KAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1470)
Q Consensus 659 g~-------------~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 724 (1470)
|. ++||+|+|+++++||+|||.++.+ .+++...++++.+++++.++.+|+|.+|.+|++|.+||||
T Consensus 518 g~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgG 597 (694)
T TIGR01846 518 GVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGG 597 (694)
T ss_pred CEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHH
Confidence 73 699999999999999999999864 6678888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChh
Q 000475 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYE 804 (1470)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~ 804 (1470)
||||++||||++++|+++|||||||+||+++++.+.+. +....+++|+|+|||+++.++.||+|++|++|++++.|+++
T Consensus 598 q~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~ 676 (694)
T TIGR01846 598 QRQRIAIARALVGNPRILIFDEATSALDYESEALIMRN-MREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHE 676 (694)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHH-HHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHH
Confidence 99999999999999999999999999999999888765 45556789999999999999999999999999999999999
Q ss_pred hHHhhchhHHHHHHH
Q 000475 805 DLIADQNSELVRQMK 819 (1470)
Q Consensus 805 ~l~~~~~~~~~~~~~ 819 (1470)
++++ .+..+.++..
T Consensus 677 ~l~~-~~~~y~~l~~ 690 (694)
T TIGR01846 677 ELLA-LQGLYARLWQ 690 (694)
T ss_pred HHHH-cCChHHHHHH
Confidence 9988 4566666543
No 74
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.6e-60 Score=653.30 Aligned_cols=474 Identities=19% Similarity=0.215 Sum_probs=366.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000475 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1470)
Q Consensus 952 ~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~ 1031 (1470)
...+.+.-..+...+++++++.|..++++..+|+++||+++|++.++... ..+..++...+.++..++++...-....+
T Consensus 366 ~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~~~lg~~~l 444 (1495)
T PLN03232 366 GRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLYQQLGVASL 444 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 45667777777889999999999999999999999999999999999875 34444554444444443333221000011
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHH
Q 000475 1032 LFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDY 1111 (1470)
Q Consensus 1032 ~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~ 1111 (1470)
+.++++++++.+. .++.+..+..++.....+....+.+.|.++|+++||+|++|+.+.+++.+..++.
T Consensus 445 ~~~~v~~l~~pl~------------~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e 512 (1495)
T PLN03232 445 FGSLILFLLIPLQ------------TLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEE 512 (1495)
T ss_pred HHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 1111111111111 2223333444444455566688899999999999999999999999988877665
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000475 1112 SCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERI 1191 (1470)
Q Consensus 1112 ~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi 1191 (1470)
.+..........+.......... ++.++.+.......+.++++.+-.++++...+...+..+...+..+.+..+|.+|+
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri 591 (1495)
T PLN03232 513 LSWFRKAQLLSAFNSFILNSIPV-VVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRI 591 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444433333332222111111 11112222223346678888888888888888888888888889999999999999
Q ss_pred HHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcC
Q 000475 1192 LQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRV 1270 (1470)
Q Consensus 1192 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl 1270 (1470)
.++.+.+++.+. . .++ ..+..+.|+++|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+
T Consensus 592 ~~~L~~~~~~~~---~-~~~-~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~ 666 (1495)
T PLN03232 592 EELLLSEERILA---Q-NPP-LQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGE 666 (1495)
T ss_pred HHHHcCcccccc---c-cCC-cCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCC
Confidence 999976554221 1 111 11234579999999999753 35799999999999999999999999999999999999
Q ss_pred CCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccc
Q 000475 1271 VEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPV 1350 (1470)
Q Consensus 1271 ~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v 1350 (1470)
++|++|.+. .+|++|+||||+|.+|+|||||||....++++++++++++.|+|.++++.+|+|+||.|
T Consensus 667 ~~~~~G~i~------------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~I 734 (1495)
T PLN03232 667 LSHAETSSV------------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEI 734 (1495)
T ss_pred CcccCCCEE------------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCcee
Confidence 999998763 46889999999999999999999998888999999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHH-HHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeC
Q 000475 1351 AEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVI-QQTIREETSRCTVITVAHRIPTVIDNDLVLVLDE 1429 (1470)
Q Consensus 1351 ~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~I-q~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~ 1429 (1470)
||+|.+||||||||++||||++++|+|++||||||+||++|++.| ++.++...+++|+|+||||++++..||+|++|++
T Consensus 735 Ge~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~ 814 (1495)
T PLN03232 735 GERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSE 814 (1495)
T ss_pred cCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999977 5567777789999999999999999999999999
Q ss_pred CEEEEecChhHHhhcCCChHHHHHHHHH
Q 000475 1430 GKVLEYDSPRQLLEDNSSSFSKLVAEFL 1457 (1470)
Q Consensus 1430 G~vvE~g~p~~Ll~~~~s~f~~lv~~~~ 1457 (1470)
|+++|.|+|++|++ +++.|++++++..
T Consensus 815 G~i~~~Gt~~eL~~-~~~~~~~l~~~~~ 841 (1495)
T PLN03232 815 GMIKEEGTFAELSK-SGSLFKKLMENAG 841 (1495)
T ss_pred CEEEEecCHHHHHh-cchhHHHHHHhcc
Confidence 99999999999997 4688999987654
No 75
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.3e-60 Score=650.24 Aligned_cols=473 Identities=19% Similarity=0.219 Sum_probs=366.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000475 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1470)
Q Consensus 952 ~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~ 1031 (1470)
...+.+.-..+...+++++++.|..+++..++|+++|++++|++.++.... .+..++...+.+++.++++...-.+..+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l 444 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASL 444 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667777777889999999999999999999999999999999998763 4555555555555544443321111111
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHH
Q 000475 1032 LFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDY 1111 (1470)
Q Consensus 1032 ~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~ 1111 (1470)
+.++++++.+.++ .++.+..+..++.....+....+.+.|.++|+++||+|++|+.|.++..+..+..
T Consensus 445 ~g~~v~~l~~~l~------------~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e 512 (1622)
T PLN03130 445 IGSLMLVLMFPIQ------------TFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDE 512 (1622)
T ss_pred HHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 1111122222222 2223333444444455567778999999999999999999999999888776664
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000475 1112 SCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERI 1191 (1470)
Q Consensus 1112 ~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi 1191 (1470)
.+..........+.......... .+.++.+.......+.++++.+..++++...+...+..+...+..+.+..+|.+|+
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI 591 (1622)
T PLN03130 513 LSWFRKAQLLSAFNSFILNSIPV-LVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRL 591 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44333222222222221111111 11122222233346778888888777777777777788888899999999999999
Q ss_pred HHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcC
Q 000475 1192 LQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRV 1270 (1470)
Q Consensus 1192 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl 1270 (1470)
.+|.+.+++.+. . .++ .-+..+.|+++|++|+|+++ .+++|+|+||+|++||+++|||++|||||||+++|+|+
T Consensus 592 ~~~L~~~e~~~~---~-~~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~ 666 (1622)
T PLN03130 592 EELLLAEERVLL---P-NPP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGE 666 (1622)
T ss_pred HHHHcCcccccc---c-CCc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHh
Confidence 999976543211 0 111 11224579999999999753 35699999999999999999999999999999999999
Q ss_pred CCCCC-cEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCcc
Q 000475 1271 VEPSG-GRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAP 1349 (1470)
Q Consensus 1271 ~~p~~-G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~ 1349 (1470)
++|++ |+|.+ |.+|+||||+|.+|+|||||||..+.++++++++++++.|+|.+++..+|+|+||.
T Consensus 667 ~~~~~GG~I~l-------------~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~ 733 (1622)
T PLN03130 667 LPPRSDASVVI-------------RGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTE 733 (1622)
T ss_pred hccCCCceEEE-------------cCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCccccc
Confidence 99999 89974 67899999999999999999999888899999999999999999999999999999
Q ss_pred ccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHH-HHHHHHhcCCcEEEEEecChhhhhhcCEEEEEe
Q 000475 1350 VAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVI-QQTIREETSRCTVITVAHRIPTVIDNDLVLVLD 1428 (1470)
Q Consensus 1350 v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~I-q~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~ 1428 (1470)
|||+|.||||||||||+||||++++|+|++||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|++|+
T Consensus 734 IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~ 813 (1622)
T PLN03130 734 IGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVH 813 (1622)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEe
Confidence 9999999999999999999999999999999999999999999876 677887778999999999999999999999999
Q ss_pred CCEEEEecChhHHhhcCCChHHHHHHHHH
Q 000475 1429 EGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1457 (1470)
Q Consensus 1429 ~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~ 1457 (1470)
+|+|+|.|+|++|++ +++.|++++++..
T Consensus 814 ~G~i~e~Gt~~eL~~-~~~~~~~l~~~~~ 841 (1622)
T PLN03130 814 EGMIKEEGTYEELSN-NGPLFQKLMENAG 841 (1622)
T ss_pred CCEEEEeCCHHHHHh-cchhHHHHHHhcc
Confidence 999999999999997 4688999987654
No 76
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.7e-61 Score=540.58 Aligned_cols=456 Identities=27% Similarity=0.419 Sum_probs=345.7
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcC-----CCCcEEEECC---
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG--- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g--- 659 (1470)
..++++|.+.++.... ......++ +|++++||.+|+||++|||||-..++++|+++. -+|++ ..+|
T Consensus 5 ~lL~v~nLsV~f~~~~----~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i-~f~G~dl 79 (534)
T COG4172 5 PLLSIRNLSVAFHQEG----GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSI-LFDGEDL 79 (534)
T ss_pred cceeeeccEEEEecCC----cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCcccee-EEcChhh
Confidence 4577888777776441 24566788 999999999999999999999999999999975 34554 4544
Q ss_pred --------------EeEEEcCCCCC-CC--ccHHHHHh----cCCCCC----HHHHHHHHHHhcchHHHHhccCCCcccc
Q 000475 660 --------------KKAYVPQSSWI-QT--GTIRENIL----FGKDMR----QSFYEEVLEGCALNQDIEMWADGDLSVV 714 (1470)
Q Consensus 660 --------------~~ayv~Q~~~i-~~--~Ti~eNI~----~g~~~~----~~~y~~v~~~~~l~~d~~~l~~g~~t~i 714 (1470)
+|++++|+|.- .| -||..-|. ..+... +++.-+.++..++.+- ...+
T Consensus 80 l~~se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p--------~~rl 151 (534)
T COG4172 80 LAASERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEP--------EKRL 151 (534)
T ss_pred hcCCHHHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCch--------hhhh
Confidence 58999999863 22 37765554 323222 2222333333443221 1224
Q ss_pred cCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEE
Q 000475 715 GERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLV 791 (1470)
Q Consensus 715 g~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~ 791 (1470)
...+++|||||||||.||.||..+||++|-||||.|||..+..+|.+ +++.+. .|..+++||||+..+.. ||+|+|
T Consensus 152 ~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~-Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~V 230 (534)
T COG4172 152 DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILD-LLKELQAELGMAILFITHDLGIVRKFADRVYV 230 (534)
T ss_pred hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHH-HHHHHHHHhCcEEEEEeccHHHHHHhhhhEEE
Confidence 46678999999999999999999999999999999999999999986 455443 37899999999999986 999999
Q ss_pred EeCCEEEEecChhhHHhhchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCccchhh
Q 000475 792 MKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTE 871 (1470)
Q Consensus 792 l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 871 (1470)
|.+|++++.|+.++++..+...+.+.+-+
T Consensus 231 M~~G~ivE~~~t~~lF~~PqHpYTr~Ll~--------------------------------------------------- 259 (534)
T COG4172 231 MQHGEIVETGTTETLFAAPQHPYTRKLLA--------------------------------------------------- 259 (534)
T ss_pred EeccEEeecCcHHHHhhCCCChHHHHHHh---------------------------------------------------
Confidence 99999999998777765221111111000
Q ss_pred cCcchHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHH
Q 000475 872 LGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLL 951 (1470)
Q Consensus 872 ~g~v~~~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~ 951 (1470)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000475 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1470)
Q Consensus 952 ~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~ 1031 (1470)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHH
Q 000475 1032 LFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDY 1111 (1470)
Q Consensus 1032 ~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~ 1111 (1470)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000475 1112 SCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERI 1191 (1470)
Q Consensus 1112 ~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi 1191 (1470)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCC---------CCCcceeeeeEEeeCCcEEEEECCCCCCHHH
Q 000475 1192 LQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNP---------TLPMVLKGITCTFPGEKKIGVVGRTGSGKST 1262 (1470)
Q Consensus 1192 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~---------~~~~vLk~is~~i~~GekvgIVGrTGSGKST 1262 (1470)
.|+. ...+|..-...--++.+|+.+.|+- +.-.+.+||||+.++||.+||||+|||||||
T Consensus 260 -------aeP~----g~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsT 328 (534)
T COG4172 260 -------AEPS----GDPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKST 328 (534)
T ss_pred -------cCCC----CCCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcch
Confidence 0100 0001100011223667777777632 1124889999999999999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEcCEeCCCCCHHH---HhcccEEEccCCC--CCc-ccHHHhcC-------cC--CCCCHHHHH
Q 000475 1263 LIQALFRVVEPSGGRILIDGVDISMIGLQD---LRSRLSIIPQDPM--LFQ-GTVRTNLD-------PL--EQHSDQEIW 1327 (1470)
Q Consensus 1263 Ll~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR~~isiIpQdp~--LF~-gTIR~NLd-------p~--~~~sd~eI~ 1327 (1470)
|-.+|+|+.++. |+|.++|.||...+.++ +|+++-+|.|||+ |-. -||-+-+. |. ..-.|+.+.
T Consensus 329 lG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~ 407 (534)
T COG4172 329 LGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVI 407 (534)
T ss_pred HHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHH
Confidence 999999999876 99999999999998776 7899999999996 211 14443332 11 112366789
Q ss_pred HHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CC
Q 000475 1328 EVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SR 1405 (1470)
Q Consensus 1328 ~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~ 1405 (1470)
+||+.+||+.-.... -...+|||||||++||||+.-+|++++||||||+||..-.++|.+.+++.. .+
T Consensus 408 ~aL~EVGLDp~~r~R----------YPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~ 477 (534)
T COG4172 408 EALEEVGLDPATRNR----------YPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHG 477 (534)
T ss_pred HHHHHcCCChhHhhc----------CCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhC
Confidence 999999997654322 234699999999999999999999999999999999999999999998754 46
Q ss_pred cEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHHH
Q 000475 1406 CTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFSK 1451 (1470)
Q Consensus 1406 ~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~ 1451 (1470)
-+-++|+|++..++. ||+|+||.+|+|||.|+.+++++++...|.+
T Consensus 478 LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~ 524 (534)
T COG4172 478 LSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTR 524 (534)
T ss_pred CeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHH
Confidence 799999999999977 9999999999999999999999999887754
No 77
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-60 Score=608.80 Aligned_cols=200 Identities=21% Similarity=0.336 Sum_probs=167.7
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+++. .+++
T Consensus 312 ~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ig 378 (638)
T PRK10636 312 LLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKLG 378 (638)
T ss_pred eEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEEE
Confidence 5999999999964 35999999999999999999999999999999999999999999999741 2699
Q ss_pred EEccCC--CCCc-ccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccC
Q 000475 1299 IIPQDP--MLFQ-GTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKK 1374 (1470)
Q Consensus 1299 iIpQdp--~LF~-gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~ 1374 (1470)
|+||++ .+.. .|+.+++... ....++++.+.|+..++.+. -.+.++ ..||||||||++||||++++
T Consensus 379 y~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~------~~~~~~----~~LSgGekqRl~La~~l~~~ 448 (638)
T PRK10636 379 YFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGD------KVTEET----RRFSGGEKARLVLALIVWQR 448 (638)
T ss_pred EecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChh------HhcCch----hhCCHHHHHHHHHHHHHhcC
Confidence 999985 3443 3788876321 22345567778888876321 123344 46999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEE-EecChhHHhh
Q 000475 1375 KRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVL-EYDSPRQLLE 1443 (1470)
Q Consensus 1375 ~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vv-E~g~p~~Ll~ 1443 (1470)
|++|||||||++||+.+...+.+.|++. +.|||+|||++..+.. ||+|++|++|+++ ..|++++..+
T Consensus 449 p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 449 PNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 9999999999999999999999999886 4599999999999976 9999999999998 6788888743
No 78
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.5e-58 Score=587.77 Aligned_cols=529 Identities=26% Similarity=0.364 Sum_probs=412.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 273 VWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSA 352 (1470)
Q Consensus 273 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~rir~~ 352 (1470)
++ .+....++.++..++....|.++..+++.+.. .. ... ..+...+++..++..++.....+....++.++...
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~-~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 86 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA-DL-GEL---LELLLLLLLLALLGGVLRALQSYLGSRLGQKIVAD 86 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hH-HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 78888888888899999999999999988761 11 111 11111122222233333333445555666888888
Q ss_pred HHHHHHHHhcccccC---CCCHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 000475 353 LTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLYIHRIWL-LPVQVFLALVILYKNLGAAPAFAALFSTIFV 428 (1470)
Q Consensus 353 L~~~iy~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~~~~~~w~-~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i~ 428 (1470)
+...+|+|.++++.. ...+|++++.+++|++.+...+........ .++.+ ++.+.+...++|..+++.+++.+++
T Consensus 87 lr~~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~l~~~~~~~~~ 165 (567)
T COG1132 87 LRRDLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLL-IGSLVLLFSLSWRLALILLLILPLL 165 (567)
T ss_pred HHHHHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 999999999988732 227899999999999999998876533333 33333 3333344455545666666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 000475 429 MVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIA-FLFWA 507 (1470)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~-~~~~~ 507 (1470)
......+.++.++...+..+..++..+.+.|.++|+++||.|+.|+...++..+..+...+...+.....+... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (567)
T COG1132 166 ALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLL 245 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667777667888888999999999999999999999999999998766666554333332222122222221 11111
Q ss_pred -HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-CCCCCCCCCC
Q 000475 508 -SPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQ-KKPITEPTSK 585 (1470)
Q Consensus 508 -~p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~-~~~~~~~~~~ 585 (1470)
.-....++.++.+.+..+.++.+.+.+++.++..+..|+..+...+..+.++..|.+|+.++++.++. .+.... ..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--~~ 323 (567)
T COG1132 246 SSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP--LK 323 (567)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC--CC
Confidence 12233344566666777889999999999999999999999999999999999999999999998652 211111 12
Q ss_pred CCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC-----
Q 000475 586 ASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG----- 659 (1470)
Q Consensus 586 ~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g----- 659 (1470)
..+..|+++|++|+|+++ .+.++| ||++++||++|||||+|||||||+++|+|.++|++|++ .++|
T Consensus 324 ~~~~~I~f~~vsf~y~~~-------~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I-~idg~dI~~ 395 (567)
T COG1132 324 DTIGSIEFENVSFSYPGK-------KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEI-LIDGIDIRD 395 (567)
T ss_pred CCCCeEEEEEEEEEcCCC-------CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeE-EECCEehhh
Confidence 233569999999999853 578999 99999999999999999999999999999999999997 7777
Q ss_pred --------EeEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHH
Q 000475 660 --------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQ 730 (1470)
Q Consensus 660 --------~~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 730 (1470)
+++||||+|++|++||+|||.+|++ .++++..++++.+++++.++.+|+|.+|.+||+|.+||||||||++
T Consensus 396 i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrla 475 (567)
T COG1132 396 ISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLA 475 (567)
T ss_pred cCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHH
Confidence 3699999999999999999999988 5778888999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHHhhc
Q 000475 731 LARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQ 810 (1470)
Q Consensus 731 LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 810 (1470)
||||+++||+|++||||||+||+++++.+.+. +....++||+++|+|+++.+..||+|+||++|+|++.|+++|+++ .
T Consensus 476 iARall~~~~ILILDEaTSalD~~tE~~I~~~-l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~-~ 553 (567)
T COG1132 476 IARALLRNPPILILDEATSALDTETEALIQDA-LKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLA-K 553 (567)
T ss_pred HHHHHhcCCCEEEEeccccccCHHhHHHHHHH-HHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHH-c
Confidence 99999999999999999999999999888765 445557899999999999999999999999999999999999998 5
Q ss_pred hhHHHHHHHH
Q 000475 811 NSELVRQMKA 820 (1470)
Q Consensus 811 ~~~~~~~~~~ 820 (1470)
++.+.++...
T Consensus 554 ~g~y~~l~~~ 563 (567)
T COG1132 554 GGLYARLYQA 563 (567)
T ss_pred CCHHHHHHHH
Confidence 6677766654
No 79
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=4.4e-58 Score=583.27 Aligned_cols=534 Identities=18% Similarity=0.267 Sum_probs=412.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 269 IIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIR 348 (1470)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~r 348 (1470)
.++.+++.+++..++.++..++..+.|++++.+++.+..... .. .+ ++.+++..++..+....+.+...++..+
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~---~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD---VL-PT--LALWAGFGVFNTIAYVLVAREADRLAHG 86 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---HH-HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456678888888888899999999999999999997654321 11 11 1111122223333333344556788888
Q ss_pred HHHHHHHHHHHHhcccccC---CCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 000475 349 VRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFS 424 (1470)
Q Consensus 349 ir~~L~~~iy~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~ 424 (1470)
+|..+...+|+|.++++.. .+++|++++.++.|++.+.+++. .+..+....+.+++.+++++ .+.|..+++.+++
T Consensus 87 ~~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~l~li~l~~ 165 (585)
T TIGR01192 87 RRATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAF-AMDWRLSIVLMVL 165 (585)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 9999999999999988753 34899999999999999987664 33334444444444444443 2444555655555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 425 TIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFL 504 (1470)
Q Consensus 425 ~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~ 504 (1470)
+++...+...+.++.++.+++..+..++..+.+.|.++|+++||.++.|+.+.+++++..++-.+...+.....+....+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (585)
T TIGR01192 166 GILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGL 245 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666667777888888888888888999999999999999999999999888887766433222211111111111111
Q ss_pred HH--HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-CCCCC
Q 000475 505 FW--ASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQK-KPITE 581 (1470)
Q Consensus 505 ~~--~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~-~~~~~ 581 (1470)
.. ..-..+.++.+|.+.+..+.++.+.+++++.++..+..|+..++..+..+.+++.+++|+.++++.++.. +....
T Consensus 246 ~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~ 325 (585)
T TIGR01192 246 NRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPADA 325 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCccC
Confidence 11 1112234456777888889999999999999999999999999999999999999999999999765421 11111
Q ss_pred CCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC-
Q 000475 582 PTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG- 659 (1470)
Q Consensus 582 ~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g- 659 (1470)
.+.......++++|++|+|+++ .+.+++ |+++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 326 ~~~~~~~~~i~~~~v~~~y~~~-------~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i-~~~g~ 397 (585)
T TIGR01192 326 PELPNVKGAVEFRHITFEFANS-------SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQI-LIDGI 397 (585)
T ss_pred CCCCCCCCeEEEEEEEEECCCC-------CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEE-EECCE
Confidence 1111123469999999999743 346889 99999999999999999999999999999999999986 7766
Q ss_pred ------------EeEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHH
Q 000475 660 ------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1470)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 726 (1470)
.++||+|+|+++++|++|||.++.+ .+++..+++++.+++++.+..+|+|.+|.+|++|.+||||||
T Consensus 398 ~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~ 477 (585)
T TIGR01192 398 DINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGER 477 (585)
T ss_pred EhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHH
Confidence 3699999999999999999999864 466777788888899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhH
Q 000475 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDL 806 (1470)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l 806 (1470)
||++||||++++|++++||||||+||+++++.+.+ .+....+++|+|+|||+++.++.||+|++|++|++++.|+++++
T Consensus 478 qrl~lARall~~p~ililDEpts~LD~~~~~~i~~-~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 556 (585)
T TIGR01192 478 QRLAIARAILKNAPILVLDEATSALDVETEARVKN-AIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQEL 556 (585)
T ss_pred HHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHH-HHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999888865 45555678999999999999999999999999999999999999
Q ss_pred HhhchhHHHHHHH
Q 000475 807 IADQNSELVRQMK 819 (1470)
Q Consensus 807 ~~~~~~~~~~~~~ 819 (1470)
.+ ++..+.++..
T Consensus 557 ~~-~~~~y~~l~~ 568 (585)
T TIGR01192 557 IQ-KDGRFYKLLR 568 (585)
T ss_pred HH-CCChHHHHHH
Confidence 87 5556665554
No 80
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=2.1e-58 Score=582.50 Aligned_cols=506 Identities=21% Similarity=0.252 Sum_probs=389.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 274 WKSLALNAAFAGVNTIASYIGPFLITNFVSFLS-GKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSA 352 (1470)
Q Consensus 274 ~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~-~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~rir~~ 352 (1470)
|+.++...++.++..++..+.|+++..+++.+. +... ... -+.+++.+++..++..++.....+...+++.++...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (529)
T TIGR02857 2 RRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEP--LAE-LLPALGALALAVLLRALLGWLGERAAARAAAAVKSQ 78 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC--hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777888888899999999999999999773 3221 111 222333344444445555555556677888888888
Q ss_pred HHHHHHHHhcccccC---CCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 000475 353 LTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFV 428 (1470)
Q Consensus 353 L~~~iy~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i~ 428 (1470)
+...+|+|.++++.. ..++|+++|.+++|++++.+++. .+..+....+.+++++++++. ++|+.+++.++.+++.
T Consensus 79 lr~~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~~~~l~~~~l~ 157 (529)
T TIGR02857 79 LRERLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFP-ADWISGLILLLTAPLI 157 (529)
T ss_pred HHHHHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHH
Confidence 999999999987543 34899999999999999998765 355555555555544444432 3334444444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 429 MVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWAS 508 (1470)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~ 508 (1470)
..+...+.++.++..++.++..+++.+.+.|.++|+++||.|++|+.+.+++++.-++..+...+..........+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (529)
T TIGR02857 158 PIFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELF 237 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455667777778888889999999999999999999999999999988887664333222222222122211111111
Q ss_pred HHH--HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 000475 509 PTL--VSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEPTSKA 586 (1470)
Q Consensus 509 p~~--v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~ 586 (1470)
..+ +.++.++.+.+..+.++.+.+++++.+...+..|+..+...+..+.+++++++|+.++++.+++.......+ ..
T Consensus 238 ~~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~~~~-~~ 316 (529)
T TIGR02857 238 ATLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKAPVT-AA 316 (529)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCCC-CC
Confidence 111 112234445555778999999999999999999999999999999999999999999997543211111111 11
Q ss_pred CCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE-----
Q 000475 587 SDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK----- 660 (1470)
Q Consensus 587 ~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~----- 660 (1470)
....|+++|++|+|+++ ..+.+++ |+++++|++++|+||||||||||+++|+|+++|++|++ .++|.
T Consensus 317 ~~~~i~~~~v~f~y~~~------~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I-~~~g~~i~~~ 389 (529)
T TIGR02857 317 PAPSLEFSGLSVAYPGR------RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSI-AVNGVPLADA 389 (529)
T ss_pred CCCeEEEEEEEEECCCC------CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE-EECCEehhhC
Confidence 22469999999999854 2468999 99999999999999999999999999999999999986 77763
Q ss_pred --------eEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHH
Q 000475 661 --------KAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQL 731 (1470)
Q Consensus 661 --------~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 731 (1470)
++||+|+|++|++||+|||.+|.+ .++++.+++++.++++++++.+|+|.+|.+||+|.+||||||||++|
T Consensus 390 ~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~l 469 (529)
T TIGR02857 390 DADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLAL 469 (529)
T ss_pred CHHHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHH
Confidence 799999999999999999999865 57788999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEE
Q 000475 732 ARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVM 792 (1470)
Q Consensus 732 ARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l 792 (1470)
|||++++|++++||||||+||+++++.+++. +....+++|+|+|||+++.+..||+|++|
T Consensus 470 aRal~~~~~ililDE~ts~lD~~~~~~i~~~-l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 470 ARAFLRDAPLLLLDEPTAHLDAETEALVTEA-LRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHHHhcCCCEEEEeCcccccCHHHHHHHHHH-HHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999999999998765 55556789999999999999999999985
No 81
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-57 Score=539.68 Aligned_cols=523 Identities=22% Similarity=0.307 Sum_probs=407.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 279 LNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTVLIY 358 (1470)
Q Consensus 279 ~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~rir~~L~~~iy 358 (1470)
+.+++..+..++...+-.++-.+++-+-..+. ...-+.++++++++.++.+++.-.-....++.+.++|..+...++
T Consensus 4 i~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~---~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l 80 (559)
T COG4988 4 ISALLAVLSGIAIIAQAALLADILTKLIEGQL---FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVL 80 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666666677777666654433321 111233444555555555555444445677889999999999999
Q ss_pred HHhcccccC---CCCHHHHHHHHHHhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000475 359 KRSMAIKFA---GPSSGIIINMINVDVERIGDFFL----YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVS 431 (1470)
Q Consensus 359 ~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~----~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i~~~~ 431 (1470)
+|..++... ..++|++.++++.-++.+..++. .+...-..|+-+.++++...+ .++++-++++.+..++
T Consensus 81 ~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w----~aalIllit~PlIPlf 156 (559)
T COG4988 81 DKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNW----AAALILLITAPLIPLF 156 (559)
T ss_pred HHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHH
Confidence 999988753 23899999999999999887653 333445567666666665554 4455555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 432 NTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKL----LRLREIERDSLKKYLYTCSAIAFLFWA 507 (1470)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i----~~~R~~E~~~l~~~~~~~~~~~~~~~~ 507 (1470)
.+.+++..++..++.++.-..--...-+-|+|+.++|.|+-.+...++| ++.|+.-++.+|-.....++.-++...
T Consensus 157 Milvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~l 236 (559)
T COG4988 157 MILVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYL 236 (559)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666777777777777777777778889999999999999887766666 466888888887665554444444333
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-CCCCC-CCC
Q 000475 508 SPTLVSVITFGVCILLK-TPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQK-KPITE-PTS 584 (1470)
Q Consensus 508 ~p~~v~~~~f~~~~~~~-~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~-~~~~~-~~~ 584 (1470)
+- .+ ++.+...-+.+ ++++-...+.++.+-.-.-.|++.+...+..-.++..+.+++..|++.++.. +.... ...
T Consensus 237 si-Al-vAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~ 314 (559)
T COG4988 237 SI-AL-VAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVA 314 (559)
T ss_pred HH-HH-HHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccc
Confidence 32 22 23334444556 6999999999999988899999999999999999999999999999988732 21111 111
Q ss_pred CCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----
Q 000475 585 KASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---- 659 (1470)
Q Consensus 585 ~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---- 659 (1470)
......+..+|.+|.|++. ++.+++ |+++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 315 ~~~~~ei~~~~l~~~y~~g-------~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I-~vng~~l~ 386 (559)
T COG4988 315 NEPPIEISLENLSFRYPDG-------KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEI-RVNGIDLR 386 (559)
T ss_pred cCCCceeeecceEEecCCC-------CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceE-EECCcccc
Confidence 1123345556999999865 378899 99999999999999999999999999999999999996 8886
Q ss_pred ---------EeEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHH
Q 000475 660 ---------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1470)
Q Consensus 660 ---------~~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 729 (1470)
+++||+|+|.++.+||||||+++++ .+++...++++..++.+.++. |+|.+|.+||+|.+|||||+|||
T Consensus 387 ~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRl 465 (559)
T COG4988 387 DLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRL 465 (559)
T ss_pred ccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHH
Confidence 3799999999999999999999998 567888999999999999988 99999999999999999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHHhh
Q 000475 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIAD 809 (1470)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 809 (1470)
+||||+++++++||||||||+||++++..+.+ .+..+.++|||++|||+++.+..+|+|++|++|+++++|+++++.+
T Consensus 466 aLARAll~~~~l~llDEpTA~LD~etE~~i~~-~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~- 543 (559)
T COG4988 466 ALARALLSPASLLLLDEPTAHLDAETEQIILQ-ALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSE- 543 (559)
T ss_pred HHHHHhcCCCCEEEecCCccCCCHhHHHHHHH-HHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhh-
Confidence 99999999999999999999999999777754 5667778899999999999999999999999999999999999988
Q ss_pred chhHHHHHHHHh
Q 000475 810 QNSELVRQMKAH 821 (1470)
Q Consensus 810 ~~~~~~~~~~~~ 821 (1470)
++..+.+++..+
T Consensus 544 ~~~~y~~l~~~q 555 (559)
T COG4988 544 KQGLYANLLKQQ 555 (559)
T ss_pred cCcHHHHHHHHH
Confidence 566676666543
No 82
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=5.6e-59 Score=595.67 Aligned_cols=200 Identities=24% Similarity=0.369 Sum_probs=166.3
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +++
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 4899999999964 35999999999999999999999999999999999999999999999 4332 699
Q ss_pred EEccCC-CCCcc-cHHHhcCcC-CCC--C--HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1299 IIPQDP-MLFQG-TVRTNLDPL-EQH--S--DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1299 iIpQdp-~LF~g-TIR~NLdp~-~~~--s--d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
|+||++ .++.. |+++|+... ... . +.++.+.|+..++.+ +..+.++ ..||||||||++|||||
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LSgGekqRl~la~al 455 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHP------KRAMTPV----KALSGGERNRLLLARLF 455 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCH------HHHhChh----hhCCHHHHHHHHHHHHH
Confidence 999986 46655 999999642 111 2 445666677766532 1124444 36999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEe-CCEEEEe-cChhHHhh
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLD-EGKVLEY-DSPRQLLE 1443 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~-~G~vvE~-g~p~~Ll~ 1443 (1470)
+++|++|||||||++||..+...+.+.|++. ++|||+|||+.+.+.. ||+|++|+ +|++.++ |++++.++
T Consensus 456 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 456 LKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 9999999999999999999999999999875 5699999999999865 99999998 8999886 56666543
No 83
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=5.7e-58 Score=585.10 Aligned_cols=199 Identities=22% Similarity=0.294 Sum_probs=165.5
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
..|+++|++++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ +.++
T Consensus 507 ~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 507 PIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred ceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 469999999999543 3599999999999999999999999999999999999999999999875 3579
Q ss_pred EEEccCCCCCcccHHHhcC-----cCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHc
Q 000475 1298 SIIPQDPMLFQGTVRTNLD-----PLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLL 1372 (1470)
Q Consensus 1298 siIpQdp~LF~gTIR~NLd-----p~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL 1372 (1470)
+|+||++. ...++.+|.. .+...+++++.++|+..++.+.. .+.+ ...||||||||++||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~------~~~~----~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNL------ALQP----MYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHH------hcCC----ccccCHHHHHHHHHHHHHh
Confidence 99999973 2224444421 12234677888899998885321 1222 3579999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEE-EecChhHH
Q 000475 1373 KKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVL-EYDSPRQL 1441 (1470)
Q Consensus 1373 r~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vv-E~g~p~~L 1441 (1470)
++|++|||||||++||+.+...+.+.|++. + .|||+|||+++.+.. ||+|++|++|+++ ..|++.+.
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~ 712 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDY 712 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHH
Confidence 999999999999999999999999998864 3 599999999999976 9999999999998 45776654
No 84
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.5e-57 Score=556.68 Aligned_cols=484 Identities=23% Similarity=0.338 Sum_probs=344.1
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--EeEEEcC
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--KKAYVPQ 666 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--~~ayv~Q 666 (1470)
.|.++|++++|.. .+.+++ |+++.+|+++||||+|||||||||++|.|++.|++|++ ...+ +++|++|
T Consensus 3 ~i~~~~ls~~~g~--------~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i-~~~~~~~v~~l~Q 73 (530)
T COG0488 3 MITLENLSLAYGD--------RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEV-TRPKGLRVGYLSQ 73 (530)
T ss_pred eEEEeeeEEeeCC--------ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeE-eecCCceEEEeCC
Confidence 4788999999953 467888 99999999999999999999999999999999999997 5554 7999999
Q ss_pred CCCCCC-ccHHHHHhcCCCCCH---HHHHHHHH---------------------HhcchHHHHhccCC--CcccccCCCC
Q 000475 667 SSWIQT-GTIRENILFGKDMRQ---SFYEEVLE---------------------GCALNQDIEMWADG--DLSVVGERGI 719 (1470)
Q Consensus 667 ~~~i~~-~Ti~eNI~~g~~~~~---~~y~~v~~---------------------~~~l~~d~~~l~~g--~~t~ig~~g~ 719 (1470)
++.... .||.+.+..|...-. ..|+++.. ...++.+++..-.| .... .....
T Consensus 74 ~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~ 152 (530)
T COG0488 74 EPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS 152 (530)
T ss_pred CCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh
Confidence 988865 599999998753211 11111111 11122223222222 1111 45668
Q ss_pred CCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEE
Q 000475 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1470)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~ 798 (1470)
+||||||.||+|||||..+||++||||||++||..+..++ ++.+... +| |+|+||||.+||+. |++|+.++.|++.
T Consensus 153 ~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WL-e~~L~~~-~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~ 229 (530)
T COG0488 153 SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWL-EDYLKRY-PG-TVIVVSHDRYFLDNVATHILELDRGKLT 229 (530)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHH-HHHHHhC-CC-cEEEEeCCHHHHHHHhhheEEecCCcee
Confidence 9999999999999999999999999999999999987666 4455543 45 99999999999997 9999999999874
Q ss_pred -EecChhhHHhhchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCccchhhcCcchH
Q 000475 799 -QSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKW 877 (1470)
Q Consensus 799 -~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~ 877 (1470)
+.|+|+.+.+.+.....+.....+.. ++ +.+
T Consensus 230 ~y~Gny~~~~~~r~~~~~~~~~~~~~~------------------------~~------------------~~~------ 261 (530)
T COG0488 230 PYKGNYSSYLEQKAERLRQEAAAYEKQ------------------------QK------------------ELA------ 261 (530)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHH------------------------HH------------------HHH------
Confidence 78999998873322221111000000 00 000
Q ss_pred HHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHH
Q 000475 878 TVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIK 957 (1470)
Q Consensus 878 ~~y~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~ 957 (1470)
.-..++.
T Consensus 262 -~~~~~i~------------------------------------------------------------------------ 268 (530)
T COG0488 262 -KEQEWIR------------------------------------------------------------------------ 268 (530)
T ss_pred -HHHHHHH------------------------------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000475 958 TAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVIL 1037 (1470)
Q Consensus 958 ~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~ 1037 (1470)
|+
T Consensus 269 -------------------------------r~----------------------------------------------- 270 (530)
T COG0488 269 -------------------------------RG----------------------------------------------- 270 (530)
T ss_pred -------------------------------HH-----------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 000475 1038 GISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFH 1117 (1470)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~ 1117 (1470)
..+..++++
T Consensus 271 -------------------~~~~~~~k~---------------------------------------------------- 279 (530)
T COG0488 271 -------------------KAAASKAKK---------------------------------------------------- 279 (530)
T ss_pred -------------------HhccchHHH----------------------------------------------------
Confidence 000000000
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH--h
Q 000475 1118 NCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQF--T 1195 (1470)
Q Consensus 1118 ~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~--~ 1195 (1470)
.++.+...+|+.+- .
T Consensus 280 ---------------------------------------------------------------a~sr~k~l~k~~~~~~~ 296 (530)
T COG0488 280 ---------------------------------------------------------------AKSRIKRLEKLEARLAE 296 (530)
T ss_pred ---------------------------------------------------------------HHHHHHHHHHHHhhhhh
Confidence 00011111222211 0
Q ss_pred cCCCCCccccC-CCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCC
Q 000475 1196 NIPSEAPLVIK-NSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS 1274 (1470)
Q Consensus 1196 ~~~~E~~~~~~-~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~ 1274 (1470)
..|.+...... .-.+++.-+.+-.++++|+++.|.++ .++++++||.|++|+|||||||||+|||||++.|.|...|.
T Consensus 297 ~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~ 375 (530)
T COG0488 297 ERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPL 375 (530)
T ss_pred cccccccccceeeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccC
Confidence 01111000000 00111111123358999999999765 56999999999999999999999999999999999999999
Q ss_pred CcEEEEcCEeCCCCCHHHHhcccEEEccCC-CCCc-ccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCcccc
Q 000475 1275 GGRILIDGVDISMIGLQDLRSRLSIIPQDP-MLFQ-GTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVA 1351 (1470)
Q Consensus 1275 ~G~I~IDG~dI~~i~l~~LR~~isiIpQdp-~LF~-gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~ 1351 (1470)
+|+|.+.-. -++||.+|+- .++. .|+-+++.... +..+.++...|.+.++... ...++|+
T Consensus 376 ~G~v~~g~~-----------v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~------~~~~~v~ 438 (530)
T COG0488 376 SGTVKVGET-----------VKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGE------DQEKPVG 438 (530)
T ss_pred CceEEeCCc-----------eEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChH------HHhCchh
Confidence 999988631 2699999997 4443 38888887544 4448889999999987543 2345554
Q ss_pred CCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCC
Q 000475 1352 EDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEG 1430 (1470)
Q Consensus 1352 e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G 1430 (1470)
.||||||-|+.||+.++.+|.+|||||||++||.+|...+.++|.++ +.|||+|||+...+.. |++|+++++
T Consensus 439 ----~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~- 511 (530)
T COG0488 439 ----VLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRVATRIWLVED- 511 (530)
T ss_pred ----hcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC-
Confidence 59999999999999999999999999999999999999999999875 4599999999999977 999999999
Q ss_pred EEEEe-cChhHHhhc
Q 000475 1431 KVLEY-DSPRQLLED 1444 (1470)
Q Consensus 1431 ~vvE~-g~p~~Ll~~ 1444 (1470)
++.++ |.+++..+.
T Consensus 512 ~~~~~~g~y~~y~~~ 526 (530)
T COG0488 512 KVEEFEGGYEDYLEQ 526 (530)
T ss_pred ceeEcCCCHHHHHHh
Confidence 88888 888877654
No 85
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.3e-56 Score=606.96 Aligned_cols=211 Identities=22% Similarity=0.278 Sum_probs=177.3
Q ss_pred cEEEEeEEEEeCC-----------CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEEcCEeC
Q 000475 1219 KIELENLLVQYNP-----------TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP--SGGRILIDGVDI 1285 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~-----------~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p--~~G~I~IDG~dI 1285 (1470)
.+.++||++..+. +...+|+|||++++|||.+||+|+||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6899999988742 123699999999999999999999999999999999999763 689999999886
Q ss_pred CCCCHHHHhcccEEEccCCCCCcc-cHHHhcCcC------CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCC
Q 000475 1286 SMIGLQDLRSRLSIIPQDPMLFQG-TVRTNLDPL------EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDG 1354 (1470)
Q Consensus 1286 ~~i~l~~LR~~isiIpQdp~LF~g-TIR~NLdp~------~~~sd~----eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G 1354 (1470)
. ....|+.++|+||++.++.. |+||||... ...+++ .+.++++..+|.+. .|+.+|..+
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 4 24577889999999987765 999999531 122333 36678888887653 367776544
Q ss_pred -CCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhh-h-hhcCEEEEEeC-
Q 000475 1355 -ENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPT-V-IDNDLVLVLDE- 1429 (1470)
Q Consensus 1355 -~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~t-i-~~~DrIlvL~~- 1429 (1470)
..||||||||++|||+|+.+|+||+||||||+||+.+...+.+.|++.. +++|||+++|+++. + ..||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 5799999999999999999999999999999999999999999999864 47999999999984 4 55999999996
Q ss_pred CEEEEecChh
Q 000475 1430 GKVLEYDSPR 1439 (1470)
Q Consensus 1430 G~vvE~g~p~ 1439 (1470)
|+++++|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999864
No 86
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-55 Score=513.02 Aligned_cols=515 Identities=22% Similarity=0.297 Sum_probs=397.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 000475 289 IASYIGPFLITNFVSFLSGKHDHSS--YHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTVLIYKRSMAIKF 366 (1470)
Q Consensus 289 ~~~~~~P~ll~~~i~~~~~~~~~~~--~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~rir~~L~~~iy~K~L~ls~ 366 (1470)
......|++++..++-++.-+. .+ .......+.+++++.+..+.+.-.-.+....+..++--.....+|+..+.++.
T Consensus 44 ~l~v~vp~~~~~~id~l~~~~~-~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~ 122 (591)
T KOG0057|consen 44 ILNVQVPFIFKLIIDGLNDADG-NPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDL 122 (591)
T ss_pred HhheehHHHHHHHHhhhhhccc-CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 4455569999999998863222 12 11122344455555555555443334444455555555566667777777665
Q ss_pred CC---CCHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 367 AG---PSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSNTPLANRQERF 442 (1470)
Q Consensus 367 ~~---~~~G~ivnlms~D~~~i~~~~~~-~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i~~~~~~~~~~~~~~~ 442 (1470)
.. +.+|++.+.|..-...|.+++.. +..+....+++.++...+|...|+..+++.++.+.....++.....+-.++
T Consensus 123 ~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~f 202 (591)
T KOG0057|consen 123 SFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRF 202 (591)
T ss_pred HhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHH
Confidence 43 48999999999999999888753 455666778888888899999995556666666666667777888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Q 000475 443 HSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRL-REIERDSLKKYLYTCSAIAFLFWA--SPTLVSVITFGV 519 (1470)
Q Consensus 443 ~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~-R~~E~~~l~~~~~~~~~~~~~~~~--~p~~v~~~~f~~ 519 (1470)
+++++++.|+-.+..-|.|.|-.+||.|+-|+.-.++.... ++.|...++....+. +..+..-. +...+.++..+.
T Consensus 203 R~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~-~lnfgQ~~iFsv~~~~im~l~~ 281 (591)
T KOG0057|consen 203 RKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLA-FLNFGQKAIFSVALTFIMVLGS 281 (591)
T ss_pred HHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999988887655 566655444333322 22222111 111122222333
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccEEEeeeEEE
Q 000475 520 CILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEPTSKASDVAIDIEAGEYA 599 (1470)
Q Consensus 520 ~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~~~~~i~~~~~~f~ 599 (1470)
.-+..+.+|.+...-.-+++..|..|+..|...+..+.|+..-..-....+..+++... ...+....+..|+++|++|+
T Consensus 282 ~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~-~~~~i~~~~~~I~F~dV~f~ 360 (591)
T KOG0057|consen 282 NGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQE-AALPIELFGGSIEFDDVHFS 360 (591)
T ss_pred hhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhh-ccCCcccCCCcEEEEeeEEE
Confidence 33456789999999999999999999999999999998888766655444433332111 01222233456999999999
Q ss_pred eCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE-------------eEEEc
Q 000475 600 WDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------------KAYVP 665 (1470)
Q Consensus 600 w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------------~ayv~ 665 (1470)
|.++ .+.|++ ||+|++||++||+|+|||||||++++|++.++ .+|++ .++|. +||||
T Consensus 361 y~~k-------~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I-~IdG~dik~~~~~SlR~~Ig~VP 431 (591)
T KOG0057|consen 361 YGPK-------RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSI-LIDGQDIKEVSLESLRQSIGVVP 431 (591)
T ss_pred eCCC-------CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcE-EECCeeHhhhChHHhhhheeEeC
Confidence 9854 568999 99999999999999999999999999999999 99996 88884 69999
Q ss_pred CCCCCCCccHHHHHhcCCCC-CHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHccCCCEEEE
Q 000475 666 QSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIF 744 (1470)
Q Consensus 666 Q~~~i~~~Ti~eNI~~g~~~-~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lL 744 (1470)
|+..|||.||.+||.+|.+. ..++..++++..++++-+..+|+|++|.+||+|..|||||||||+||||+.+||+|+++
T Consensus 432 Qd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~ 511 (591)
T KOG0057|consen 432 QDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLL 511 (591)
T ss_pred CcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEe
Confidence 99999999999999999875 34444556666789999999999999999999999999999999999999999999999
Q ss_pred eCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHHhhchhHHHHH
Q 000475 745 DDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQNSELVRQ 817 (1470)
Q Consensus 745 Dep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 817 (1470)
|||||+||.+|++.+++. +++...+||+|+|-|+++.++.||+|+++++|++.+.|+++|++. +++.+.++
T Consensus 512 DEaTS~LD~~TE~~i~~~-i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~ 582 (591)
T KOG0057|consen 512 DEATSALDSETEREILDM-IMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADL 582 (591)
T ss_pred cCcccccchhhHHHHHHH-HHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHH
Confidence 999999999999999975 555778999999999999999999999999999999999999998 66555544
No 87
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=5.1e-55 Score=601.76 Aligned_cols=467 Identities=17% Similarity=0.199 Sum_probs=356.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccccc---CCCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 000475 343 NRIGIRVRSALTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPA 418 (1470)
Q Consensus 343 ~r~g~rir~~L~~~iy~K~L~ls~---~~~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~~ 418 (1470)
...+.+.-..+...+|++.++.+. ....+|+|+|+++.|++.+.+.+. .+..+...++.++.++++++. ..++.+
T Consensus 1030 ~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~-~~~~~~ 1108 (1522)
T TIGR00957 1030 SIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILL-ATPIAA 1108 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 344555555566666666666543 234899999999999999998765 344555666666666555543 232433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 419 FAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTC 498 (1470)
Q Consensus 419 l~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~ 498 (1470)
++.+.++++...+...+.+..+..++.....+....+..+|.++|+++||.|+||+.|.++..+..+...+.........
T Consensus 1109 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 1188 (1522)
T TIGR00957 1109 VIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVAN 1188 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444555555555566566667777899999999999999999999998887766554433322211111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 000475 499 SAIAFLFWASPTLVSVITFGVCIL-LKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKK 577 (1470)
Q Consensus 499 ~~~~~~~~~~p~~v~~~~f~~~~~-~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~ 577 (1470)
............++ ++..+.+.+ ..+.+++|.+..++.+...+..|+..+......+.++.+|.+|+.+|++.+++.+
T Consensus 1189 ~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~ 1267 (1522)
T TIGR00957 1189 RWLAVRLECVGNCI-VLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAP 1267 (1522)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 11111111111111 112222333 3467999999999999999999999999999999999999999999997654221
Q ss_pred -CC-CCCCCC--CCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCC
Q 000475 578 -PI-TEPTSK--ASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISG 652 (1470)
Q Consensus 578 -~~-~~~~~~--~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G 652 (1470)
.. ...+.. ..+..|+++|++|+|+++ ..+.|+| ||+|++||++||||++|||||||+++|+|.++|++|
T Consensus 1268 ~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G 1341 (1522)
T TIGR00957 1268 WQIQETAPPSGWPPRGRVEFRNYCLRYRED------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEG 1341 (1522)
T ss_pred ccccCCCCCCCCCCCCcEEEEEEEEEeCCC------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCC
Confidence 00 111111 234579999999999864 2468999 999999999999999999999999999999999999
Q ss_pred cEEEECC-------------EeEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCC
Q 000475 653 AAIKVHG-------------KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGI 719 (1470)
Q Consensus 653 ~~i~~~g-------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~ 719 (1470)
++ .++| +++||||+|.+|+|||||||....+++++...++++.|++.+.++.+|+|.+|.+||+|.
T Consensus 1342 ~I-~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~ 1420 (1522)
T TIGR00957 1342 EI-IIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGE 1420 (1522)
T ss_pred eE-EECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCC
Confidence 96 8887 369999999999999999998333678888899999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEE
Q 000475 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQ 799 (1470)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~ 799 (1470)
+||||||||++||||++++|+|+|||||||+||+++.+.+. +.++...+++|+|+|+|+++.+..||+|+||++|+|++
T Consensus 1421 ~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq-~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE 1499 (1522)
T TIGR00957 1421 NLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQ-STIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAE 1499 (1522)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHH-HHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999977665 55676778999999999999999999999999999999
Q ss_pred ecChhhHHhhchhHHHHHHHH
Q 000475 800 SGKYEDLIADQNSELVRQMKA 820 (1470)
Q Consensus 800 ~g~~~~l~~~~~~~~~~~~~~ 820 (1470)
.|+++|+++ .+..|.++..+
T Consensus 1500 ~G~~~eLl~-~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1500 FGAPSNLLQ-QRGIFYSMAKD 1519 (1522)
T ss_pred ECCHHHHHh-CCCHHHHHHHH
Confidence 999999998 45667766543
No 88
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.3e-55 Score=508.26 Aligned_cols=463 Identities=21% Similarity=0.317 Sum_probs=354.7
Q ss_pred HHHHHHHHHHHHHHHHHhcccccCCC---CHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHH
Q 000475 344 RIGIRVRSALTVLIYKRSMAIKFAGP---SSGIIINMINVDVERIGDFFLYIHRIWLLPVQVFLALVILYKNLGA-APAF 419 (1470)
Q Consensus 344 r~g~rir~~L~~~iy~K~L~ls~~~~---~~G~ivnlms~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~-~~~l 419 (1470)
....|+-+.+.-.+|+|....+.... .+|++.|++..|++.+++.+..+..+|...+-++.++.+....+++ .+.+
T Consensus 84 ~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~All 163 (573)
T COG4987 84 DATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALL 163 (573)
T ss_pred HHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 44568889999999999988776543 8999999999999999999999988887776665555544333332 4555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 420 AALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCS 499 (1470)
Q Consensus 420 ~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~ 499 (1470)
.++..++..+++...+.+..++..++..+.+..--....|.+.|+..++++|-++.|.+.+++.-..-.+.-+|......
T Consensus 164 l~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~ 243 (573)
T COG4987 164 LGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTG 243 (573)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666667777788888888888888888878889999999999999999999988876542221121122222222
Q ss_pred HHHHHH-HHHHHHHHHHH-HHHHHHhcCCCC-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000475 500 AIAFLF-WASPTLVSVIT-FGVCILLKTPLT-SGAVLSALATFRILQEPIY-NLPELISMIAQTKVSLYRIQEFIKEDNQ 575 (1470)
Q Consensus 500 ~~~~~~-~~~p~~v~~~~-f~~~~~~~~~L~-~~~vft~l~~~~~l~~pl~-~lp~~i~~~~~a~vs~~Ri~~fL~~~e~ 575 (1470)
...++. .....++.... ...+..-.+..+ +..+...++.|..+ ++.. ..|.++..+.|+..|..|+.+.+.++++
T Consensus 244 ~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~-eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e 322 (573)
T COG4987 244 LSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAAL-EAFEPLAPGAFQHLGQVIASARRLNDILDQKPE 322 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHH-HHHhhhcchhHHHhhHHHHHHHHHhhhccCCcc
Confidence 222221 11222222111 112212223333 22222222223222 2332 2337778899999999999999987763
Q ss_pred CCCCCCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcE
Q 000475 576 KKPITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAA 654 (1470)
Q Consensus 576 ~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~ 654 (1470)
....... ....+..++++|++|+|+++ +.+.|+| ||++++||++||+|++|||||||++.|.|-++|++|++
T Consensus 323 ~~~~~~~-~~~~~~~l~~~~vsF~y~~~------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i 395 (573)
T COG4987 323 VTFPDEQ-TATTGQALELRNVSFTYPGQ------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSI 395 (573)
T ss_pred cCCCccc-cCCccceeeeccceeecCCC------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCee
Confidence 2211111 11122379999999999975 4578999 99999999999999999999999999999999999997
Q ss_pred EEECC-------------EeEEEcCCCCCCCccHHHHHhcCCCC-CHHHHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 655 IKVHG-------------KKAYVPQSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 655 i~~~g-------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~-~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
..+| .+++++|.+.+|++|+|||+.+++|. +++...++++..+|++-++..|+|.+|.+||.|..
T Consensus 396 -~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~ 474 (573)
T COG4987 396 -TLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRR 474 (573)
T ss_pred -eECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCc
Confidence 7777 35899999999999999999999875 56778889999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEe
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQS 800 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~ 800 (1470)
||||||||++|||++.+|++++||||||.+||+.|++++.+. +....++||+|+|||++..++.||+|++|++|+++++
T Consensus 475 LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~l-l~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~ 553 (573)
T COG4987 475 LSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLAL-LFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEE 553 (573)
T ss_pred CCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHH-HHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeec
Confidence 999999999999999999999999999999999999999875 4455689999999999999999999999999999999
Q ss_pred cChhhHHhhchhHHHHH
Q 000475 801 GKYEDLIADQNSELVRQ 817 (1470)
Q Consensus 801 g~~~~l~~~~~~~~~~~ 817 (1470)
|+|+++++ ++..+.++
T Consensus 554 G~~~~Ll~-~~g~~~~l 569 (573)
T COG4987 554 GTHAELLA-NNGRYKRL 569 (573)
T ss_pred CCHHhhhc-cccHHHHH
Confidence 99999998 55555544
No 89
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=5.9e-56 Score=511.33 Aligned_cols=486 Identities=19% Similarity=0.206 Sum_probs=347.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHH
Q 000475 937 SGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLL 1016 (1470)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~ 1016 (1470)
.+...++..+|+..+..++.+.-.++....+...+++|..--...+..+.+ +|++.+..++...-...++..--.-
T Consensus 73 y~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P 148 (580)
T COG4618 73 YAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMP 148 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHH
Confidence 345567778899999999999999999999999988776544333333333 3555555544321111111111112
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhch
Q 000475 1017 SIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQ 1096 (1470)
Q Consensus 1017 ~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~ 1096 (1470)
.-+++++...|++.++.+...++.+.+..... +. .|+--+..++....-.++..-+..+.++|+|.|+
T Consensus 149 ~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~--------~~----t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM 216 (580)
T COG4618 149 LYLAVIFLFHPWLGLIALAGAIILVVLALLNE--------RA----TRKPLKEASEASIRANQLADATLRNAEVIEAMGM 216 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HH----hhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcc
Confidence 22334444555554444333222221110000 11 1222222233344455677888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH-HHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHH
Q 000475 1097 ENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFF-LVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVI 1175 (1470)
Q Consensus 1097 e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~-~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i 1175 (1470)
.....+++.+....+....-...-.+.-++...-.+=..+-. +..+.......+.+++|..-..-...-..-..+-..+
T Consensus 217 ~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI 296 (580)
T COG4618 217 LGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAI 296 (580)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHH
Confidence 877776666555444333222222111111111111111111 1112233345666777654221111111122344567
Q ss_pred HHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECC
Q 000475 1176 WNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGR 1255 (1470)
Q Consensus 1176 ~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGr 1255 (1470)
..|-+.-....|..|+++..+..++.....+ -|. .+|.+.++++++.=++...++|+|+||+++|||-+|||||
T Consensus 297 ~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~m~--LP~----P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGP 370 (580)
T COG4618 297 ANWKQFVAARQSYKRLNELLAELPAAAERMP--LPA----PQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGP 370 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccccCCCC--CCC----CCceeeEeeeeecCCCCCCcceecceeEecCCceEEEECC
Confidence 7888888899999999999875443321111 111 2689999999986555556899999999999999999999
Q ss_pred CCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcCC-CCCHHHHHHHHHHcC
Q 000475 1256 TGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCH 1334 (1470)
Q Consensus 1256 TGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~ 1334 (1470)
||||||||.++|.|...|.+|.|.+||-|+.+.+.+++-++|||.|||-.||+|||++||.-|+ +.+++.|.+|.+.++
T Consensus 371 SgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAg 450 (580)
T COG4618 371 SGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAG 450 (580)
T ss_pred CCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999998876 778888999999999
Q ss_pred cHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHh-cCCcEEEEEec
Q 000475 1335 LAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREE-TSRCTVITVAH 1413 (1470)
Q Consensus 1335 L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~-~~~~TVI~IAH 1413 (1470)
.+|.|.++|+||||.|||+|..||||||||++||||+..+|+++|||||-||||.+-|+.+.++|.+. .+++|+|+|||
T Consensus 451 vHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaH 530 (580)
T COG4618 451 VHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAH 530 (580)
T ss_pred hHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999988765 47899999999
Q ss_pred ChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000475 1414 RIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1414 Rl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
|++.+..+|+|+||++|++..||+-+|.+++
T Consensus 531 RPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 531 RPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred CHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 9999999999999999999999999999875
No 90
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=9.5e-57 Score=564.98 Aligned_cols=191 Identities=25% Similarity=0.336 Sum_probs=163.5
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.++++|++++|+. ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 4899999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred EEccCCCC-CcccHHHhcCcC-CCC-CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCC
Q 000475 1299 IIPQDPML-FQGTVRTNLDPL-EQH-SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1375 (1470)
Q Consensus 1299 iIpQdp~L-F~gTIR~NLdp~-~~~-sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1375 (1470)
|+||++.+ ++.|+++|+... ..+ .+..+.++++..++.+.. |.++ ..||||||||++|||||+++|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~-------~~~~----~~LSGGe~QRvaiAraL~~~p 472 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLL-------DKNV----KDLSGGELQRVAIAACLSRDA 472 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHH-------hCCc----ccCCHHHHHHHHHHHHHhcCC
Confidence 99999875 466999999642 122 234567788888886543 3344 469999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecC
Q 000475 1376 RILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDS 1437 (1470)
Q Consensus 1376 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~ 1437 (1470)
+||+|||||++||.++...+.+.|++.. .++|||+|+|+++.+.. ||||++|++ ++...|+
T Consensus 473 ~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 473 DLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 9999999999999999999999999864 37899999999999876 999999965 8777766
No 91
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.6e-53 Score=581.57 Aligned_cols=460 Identities=17% Similarity=0.190 Sum_probs=348.6
Q ss_pred HHHHHHHHHhccccc---CCCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 000475 352 ALTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIF 427 (1470)
Q Consensus 352 ~L~~~iy~K~L~ls~---~~~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i 427 (1470)
.+...+|++.++.+. .....|+|+|.+++|++.+.+.+. .+..+....+.++.++++++.. .++..++.+.++++
T Consensus 1032 ~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~-~p~~~~~~i~~~~~ 1110 (1560)
T PTZ00243 1032 NMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSAS-QPFVLVALVPCGYL 1110 (1560)
T ss_pred HHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 445666677666543 234899999999999999998765 3445555555565555554433 32333322222233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 000475 428 VMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFL-FW 506 (1470)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~-~~ 506 (1470)
...+...+.+..+..++.....++.-....+|.++|+++||.|++|+.|.++..+.-+...+...+........... ..
T Consensus 1111 ~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~ 1190 (1560)
T PTZ00243 1111 YYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEF 1190 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455566666666667777778899999999999999999999988887655333332211111111111111 11
Q ss_pred H-HHHHHHHHHHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC--CC--
Q 000475 507 A-SPTLVSVITFGVCI--LLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKK--PI-- 579 (1470)
Q Consensus 507 ~-~p~~v~~~~f~~~~--~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~--~~-- 579 (1470)
. ....+.++.++++. ...+.++++.+..++.+...+..|+..+...+..+.++++|++||.+|++..++++ ..
T Consensus 1191 l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~ 1270 (1560)
T PTZ00243 1191 LSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDE 1270 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccc
Confidence 1 11111222222222 22345788988888888888999999999999999999999999999996432110 00
Q ss_pred ---------------------CC--C----CCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcC
Q 000475 580 ---------------------TE--P----TSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGS 631 (1470)
Q Consensus 580 ---------------------~~--~----~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~ 631 (1470)
+. . +.......|+++|++|+|+++ ..+.|+| ||+|++||++||||+
T Consensus 1271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~------~~~vL~~vsf~I~~GekVaIVGr 1344 (1560)
T PTZ00243 1271 EVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG------LPLVLRGVSFRIAPREKVGIVGR 1344 (1560)
T ss_pred cccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC------CCceeecceEEECCCCEEEEECC
Confidence 00 0 001123469999999999754 3468999 999999999999999
Q ss_pred CCCChHHHHHHHhCCCcCCCCcEEEECCE-------------eEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhc
Q 000475 632 VGSGKSSLLSSILGEIPRISGAAIKVHGK-------------KAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCA 698 (1470)
Q Consensus 632 ~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------------~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~ 698 (1470)
+|||||||+++|+|.++|++|++ .++|. ++||||+|.+|+|||||||..+.+++++...++++.|+
T Consensus 1345 TGSGKSTLl~lLlrl~~p~~G~I-~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~ 1423 (1560)
T PTZ00243 1345 TGSGKSTLLLTFMRMVEVCGGEI-RVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVG 1423 (1560)
T ss_pred CCCCHHHHHHHHhCCCCCCCcEE-EECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHCC
Confidence 99999999999999999999996 88873 69999999999999999999877888899999999999
Q ss_pred chHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHccC-CCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEc
Q 000475 699 LNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSN-SDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTT 777 (1470)
Q Consensus 699 l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~-~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvt 777 (1470)
+++.++.+|+|.+|.+||+|.|||||||||++|||||+++ |+|+|||||||+||+++.+.+. +.++...+++|+|+|+
T Consensus 1424 l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq-~~L~~~~~~~TvI~IA 1502 (1560)
T PTZ00243 1424 LRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQ-ATVMSAFSAYTVITIA 1502 (1560)
T ss_pred ChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHH-HHHHHHCCCCEEEEEe
Confidence 9999999999999999999999999999999999999995 8999999999999999988775 4566677899999999
Q ss_pred CCcchhhhcCEEEEEeCCEEEEecChhhHHhhchhHHHHHHHH
Q 000475 778 HQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQNSELVRQMKA 820 (1470)
Q Consensus 778 H~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 820 (1470)
|+++.+..||+|++|++|+|++.|+++|++++++..|.+++..
T Consensus 1503 HRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~ 1545 (1560)
T PTZ00243 1503 HRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEA 1545 (1560)
T ss_pred ccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHH
Confidence 9999999999999999999999999999997556677777654
No 92
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3.8e-54 Score=551.48 Aligned_cols=509 Identities=14% Similarity=0.082 Sum_probs=386.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHhccccccccc---cchhhhHHHh----hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 892 LVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSR---EQLIGVFIFL----SGGSSFFILGRAVLLATIAIKTAQRLFL 964 (1470)
Q Consensus 892 ~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~---~~~l~vy~~l----~~~~~~~~~~~~~~~~~~~~~~s~~l~~ 964 (1470)
.+.+.+++.++...+.+..++++....+.-...+. ..++..++++ +++..+..++...+......+..+.+|+
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~ 176 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLYS 176 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555566677777778887765542111111 1112223332 3333344444555555666677777777
Q ss_pred HHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHH
Q 000475 965 NMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQ-AAWQVFPLFLVILGISIWY 1043 (1470)
Q Consensus 965 ~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~-~~~~~~~~~ip~~~~~~~~ 1043 (1470)
+.+++....++.|||. ++|++++|+++|++.+...+...+..++..++.+++.++.+.. .+|.+.++++...++..++
T Consensus 177 ~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i 255 (659)
T TIGR00954 177 KYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVV 255 (659)
T ss_pred HHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 7777777788889997 8899999999999999999999999999999998888777775 8887766555544444433
Q ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhH
Q 000475 1044 QVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTME 1123 (1470)
Q Consensus 1044 ~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1123 (1470)
. +++.+..+++.+......+.+.+.+.|.++|+.+||+|+.++.+.+++.+..++..+..........
T Consensus 256 ~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~ 323 (659)
T TIGR00954 256 L------------TKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRF 323 (659)
T ss_pred H------------HHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 5556666667777777778889999999999999999999999999999988888888877777777
Q ss_pred HHHHHHHHHHHHHHH-HH--HH-HHHhhcC----CCcCHHH-HHHHHHH---HHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000475 1124 WLCLRINLLFNFAFF-LV--LI-ILVTLPR----SAIDPSL-AGLAATY---GLNLNVLQAWVIWNLCNVENKMISVERI 1191 (1470)
Q Consensus 1124 wl~~~l~~l~~~~~~-~~--~~-~~~~~~~----~~~~~~~-~gl~l~y---~l~l~~~~~~~i~~~~~le~~~~sveRi 1191 (1470)
++....+++...+.. +. .. ..+.... +.++.|. ++...+| ...+...+..+.....++.....+.+|+
T Consensus 324 ~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri 403 (659)
T TIGR00954 324 SYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARV 403 (659)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777776666542211 11 11 1122211 4556554 3434444 4455677778888999999999999999
Q ss_pred HHHhcCCCCCc-------cccC--CC-----CCC------CCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEE
Q 000475 1192 LQFTNIPSEAP-------LVIK--NS-----RPS------PEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIG 1251 (1470)
Q Consensus 1192 ~~~~~~~~E~~-------~~~~--~~-----~~~------~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~Gekvg 1251 (1470)
.++.+.++|.. ...+ +. +++ ..-...+.|+++||+++|+++ +++|+|+||+|++||++|
T Consensus 404 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~ 482 (659)
T TIGR00954 404 DTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLL 482 (659)
T ss_pred HHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEE
Confidence 99986533211 0000 00 000 000134679999999999644 369999999999999999
Q ss_pred EECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC--------CCCCH
Q 000475 1252 VVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL--------EQHSD 1323 (1470)
Q Consensus 1252 IVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~--------~~~sd 1323 (1470)
|+|+||||||||+++|.|+++|++|+|.+|+ |++++++||+|.+|++|+|+|+... .+.++
T Consensus 483 IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~ 551 (659)
T TIGR00954 483 ICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSD 551 (659)
T ss_pred EECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCH
Confidence 9999999999999999999999999999874 6789999999999999999999642 24678
Q ss_pred HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc
Q 000475 1324 QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET 1403 (1470)
Q Consensus 1324 ~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~ 1403 (1470)
++++++++.+++.+++.. |.|+|+..+ .+.+||||||||++||||++++|++|+||||||+||+++++.+++.+++.
T Consensus 552 ~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~- 628 (659)
T TIGR00954 552 KDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF- 628 (659)
T ss_pred HHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc-
Confidence 899999999999999877 999999876 56799999999999999999999999999999999999999999999874
Q ss_pred CCcEEEEEecChhhhhhcCEEEEEeC
Q 000475 1404 SRCTVITVAHRIPTVIDNDLVLVLDE 1429 (1470)
Q Consensus 1404 ~~~TVI~IAHRl~ti~~~DrIlvL~~ 1429 (1470)
++|+|+||||++++..||+|++|+.
T Consensus 629 -~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 629 -GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred -CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 8999999999999999999999973
No 93
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1e-52 Score=531.56 Aligned_cols=508 Identities=15% Similarity=0.148 Sum_probs=368.5
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 269 IIH-AVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGI 347 (1470)
Q Consensus 269 l~~-~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~ 347 (1470)
+++ .+|+.+++..++.++..++....|.+++.+++...... ... .+.+++ +++.. .++.....+...+.+.
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~---~~~-~~~~~~-~~~~~---~~~~~~~~~~~~~~~~ 82 (555)
T TIGR01194 11 LLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFLG---QGS-LFSFGG-LCLLA---LLFRIGADIFPAYAGM 82 (555)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc---chH-HHHHHH-HHHHH---HHHHHHHHHHHHHHHH
Confidence 456 67788888888999999999999999988875321100 011 111222 22222 2222233344567788
Q ss_pred HHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 000475 348 RVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLYIHRIWLLPVQVFLALVILYKNLGAAPAFAALFS 424 (1470)
Q Consensus 348 rir~~L~~~iy~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~ 424 (1470)
++...+...+|+|.++++.. ..++|++++.+++|++.+.+++..+..+....+.+++++++++. +.|..+++.++.
T Consensus 83 ~~~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~L~li~l~~ 161 (555)
T TIGR01194 83 HIIANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAY-LSVPMFAITISA 161 (555)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHH
Confidence 88888999999999987653 34899999999999999999876555555555555544444443 333555555544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 425 TIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQ--EFLKKLLRLREIERDSLKKYLYTCSAIA 502 (1470)
Q Consensus 425 ~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~--~f~~~i~~~R~~E~~~l~~~~~~~~~~~ 502 (1470)
+++.+.+..+..++.++...+..+..++..+.+.|.++|++++|.++.++ ...+++.+..++-.+...+.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (555)
T TIGR01194 162 IIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAE 241 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555566666777777888888899999999999999999999854 3334443332211111111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC--CC
Q 000475 503 FLFWASPTLVSVITFGVCIL---LKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQ--KK 577 (1470)
Q Consensus 503 ~~~~~~p~~v~~~~f~~~~~---~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~--~~ 577 (1470)
......+ .+.++.+++ ..+.++.+.+++++.+...+..|+..+...+..+.++++|++||.++++.++. ..
T Consensus 242 ~~~~~~~----~~~~~~~~~~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~ 317 (555)
T TIGR01194 242 NFGQLLF----FLLIGCALFAAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPE 317 (555)
T ss_pred HHHHHHH----HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 1111111 111111111 12579999999999999999999999999999999999999999999863221 10
Q ss_pred --CCCCC-----CCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcC
Q 000475 578 --PITEP-----TSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR 649 (1470)
Q Consensus 578 --~~~~~-----~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~ 649 (1470)
..... +.......|+++|++|+|++.+. ...+.+++ ||++++|++++|+||||||||||+++|+|+++|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~---~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p 394 (555)
T TIGR01194 318 LELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEG---SEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIP 394 (555)
T ss_pred ccccccccccccccCCCCceEEEEEEEEEeCCCCC---CcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 00000 11112346999999999975310 12367999 999999999999999999999999999999999
Q ss_pred CCCcEEEECCE-------------eEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccC
Q 000475 650 ISGAAIKVHGK-------------KAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGE 716 (1470)
Q Consensus 650 ~~G~~i~~~g~-------------~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~ 716 (1470)
++|++ .++|. ++||+|+|++|++|+++|+ ..+.++++.+++++.++++++++.+|+|++|.
T Consensus 395 ~~G~i-~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~--- 468 (555)
T TIGR01194 395 QEGEI-LLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT--- 468 (555)
T ss_pred CCcEE-EECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc---
Confidence 99996 77763 5999999999999999995 33456677788999999999999999999883
Q ss_pred CCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhhcCEEEEEeCC
Q 000475 717 RGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDAADLVLVMKDG 795 (1470)
Q Consensus 717 ~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~~d~i~~l~~G 795 (1470)
.+||||||||++||||++++|+|+|||||||+||+++++.+.+.+++.. .+++|+|+|||+++.+..||+|++|++|
T Consensus 469 --~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G 546 (555)
T TIGR01194 469 --TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAG 546 (555)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECC
Confidence 7899999999999999999999999999999999999999887665443 3689999999999999899999999999
Q ss_pred EEEEe
Q 000475 796 KIEQS 800 (1470)
Q Consensus 796 ~i~~~ 800 (1470)
++++.
T Consensus 547 ~i~~~ 551 (555)
T TIGR01194 547 CIVKD 551 (555)
T ss_pred EEEEe
Confidence 99864
No 94
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.9e-53 Score=549.03 Aligned_cols=476 Identities=20% Similarity=0.238 Sum_probs=363.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000475 951 LATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVF 1030 (1470)
Q Consensus 951 ~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~ 1030 (1470)
....|.+.-..+-..++++.++..-.--..++.|+|+|-++.|.+.+++..++ +..+..+.++++..+.++...--+-+
T Consensus 266 ~~~~g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~-~h~~w~~Plqi~~~l~lLy~~LG~sa 344 (1381)
T KOG0054|consen 266 SFRVGMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACF-LHLLWSAPLQIILALYLLYGLLGPSA 344 (1381)
T ss_pred HHhhhhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 34556666666666677777777776667788999999999999999986554 45555566666555554433211112
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHH
Q 000475 1031 PLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDD 1110 (1470)
Q Consensus 1031 ~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~ 1110 (1470)
++.+.++++++-++ .+..+..+..++.....+.......+|.++|+++||.|+||+.|.++..+.-++
T Consensus 345 ~~G~~~~il~~p~n------------~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~ 412 (1381)
T KOG0054|consen 345 LAGVAVMVLLIPLN------------SFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQK 412 (1381)
T ss_pred HHHHHHHHHHHHHH------------HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHH
Confidence 22222333333333 333444455555566667777888999999999999999999999887766554
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 000475 1111 YSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVT-LPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVE 1189 (1470)
Q Consensus 1111 ~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sve 1189 (1470)
-.+.................. ...++.++.+.... ...+..+|..+-.++++.-.+...+.++......+-+..+|++
T Consensus 413 El~~lrk~~~~~~~~~~~~~~-~p~lv~~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~ 491 (1381)
T KOG0054|consen 413 ELKLLRKSAYLSALNSFLNFF-SPVLVSVVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLK 491 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333322222222222222111 22222222222222 3345567767777777776677777777777778888899999
Q ss_pred HHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHh
Q 000475 1190 RILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALF 1268 (1470)
Q Consensus 1190 Ri~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~ 1268 (1470)
|+.+|...++-.+...+. .+.-+.+-.|+++|.+++++++ .++.|+||||+|++|+.+||||++|||||||+++|+
T Consensus 492 Ri~~fl~~~e~~~~~~~~---~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiL 568 (1381)
T KOG0054|consen 492 RLKEFLLSEELDPDSVER---SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAIL 568 (1381)
T ss_pred HHHHHhcCcccCcccccc---CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHh
Confidence 999999765543322211 1112334569999999999764 345999999999999999999999999999999999
Q ss_pred cCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCc
Q 000475 1269 RVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDA 1348 (1470)
Q Consensus 1269 rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt 1348 (1470)
|.++..+|++.++|. ++|+||.|.+|+|||||||-...+++++.-.++++.|+|.+.++.+|.|-.|
T Consensus 569 GEm~~~sG~v~v~gs-------------iaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~T 635 (1381)
T KOG0054|consen 569 GEMPKLSGSVAVNGS-------------VAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLT 635 (1381)
T ss_pred cCcccccceEEEcCe-------------EEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcc
Confidence 999999999999994 9999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHH-HHHHHHhcCCcEEEEEecChhhhhhcCEEEEE
Q 000475 1349 PVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVI-QQTIREETSRCTVITVAHRIPTVIDNDLVLVL 1427 (1470)
Q Consensus 1349 ~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~I-q~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL 1427 (1470)
.|||+|.|||||||||++||||++++++|.+||.|-|+||.++-+.| ++.|+...+++|+|.|||.++.+.+||+|+||
T Consensus 636 eIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl 715 (1381)
T KOG0054|consen 636 EIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVL 715 (1381)
T ss_pred eecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEe
Confidence 99999999999999999999999999999999999999999997765 67888888999999999999999999999999
Q ss_pred eCCEEEEecChhHHhhcCCChHHHHHHHHH
Q 000475 1428 DEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1457 (1470)
Q Consensus 1428 ~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~ 1457 (1470)
++|+|+|.|+++||++ .++.|.+|..+..
T Consensus 716 ~~G~I~~~Gty~el~~-~~~~~~~l~~~~~ 744 (1381)
T KOG0054|consen 716 KDGKIVESGTYEELLK-SGGDFAELAHEEE 744 (1381)
T ss_pred cCCeEecccCHHHHHh-cchhHHHHhhccc
Confidence 9999999999999996 5778888855443
No 95
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-54 Score=512.16 Aligned_cols=441 Identities=23% Similarity=0.354 Sum_probs=333.0
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE-------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK------- 660 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~------- 660 (1470)
..++++|++.+|+. ...|++ ||++.+||++|++|.||+|||||+|.|.|.++|++|++ .++|+
T Consensus 7 ~ll~~~~i~K~Fgg--------V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I-~~~G~~~~~~sp 77 (500)
T COG1129 7 PLLELRGISKSFGG--------VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEI-LIDGKPVAFSSP 77 (500)
T ss_pred ceeeeecceEEcCC--------ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceE-EECCEEccCCCH
Confidence 46889999999974 478999 99999999999999999999999999999999999996 88885
Q ss_pred -------eEEEcCCCCC-CCccHHHHHhcCCCCCH-------HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 661 -------KAYVPQSSWI-QTGTIRENILFGKDMRQ-------SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 661 -------~ayv~Q~~~i-~~~Ti~eNI~~g~~~~~-------~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
|+.|+|+.-+ ++.||.|||.+|++... ...++..+ +-++.+.... .......+||+||
T Consensus 78 ~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~-----~~l~~lg~~~--~~~~~v~~Lsiaq 150 (500)
T COG1129 78 RDALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRAR-----ELLARLGLDI--DPDTLVGDLSIAQ 150 (500)
T ss_pred HHHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHH-----HHHHHcCCCC--ChhhhhhhCCHHH
Confidence 5899999776 67899999999976432 22221111 1122221111 1456778999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecCh-
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKY- 803 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~- 803 (1470)
||-|+||||++.+++|++||||||+|+.+..+++|+.+.+-..+|.++|+|||+++++.. ||+|.||+||+.+..++.
T Consensus 151 rQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~ 230 (500)
T COG1129 151 RQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTA 230 (500)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccc
Confidence 999999999999999999999999999999999997544434469999999999998765 999999999998865431
Q ss_pred hhHHhhchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCccchhhcCcchHHHHHHH
Q 000475 804 EDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYSAF 883 (1470)
Q Consensus 804 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y 883 (1470)
.++.. ++ -
T Consensus 231 ~~~~~----------------------------------------~~--------------------------------l 238 (500)
T COG1129 231 AETSE----------------------------------------DE--------------------------------L 238 (500)
T ss_pred cCCCH----------------------------------------HH--------------------------------H
Confidence 11100 00 0
Q ss_pred HHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 884 ITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLF 963 (1470)
Q Consensus 884 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~ 963 (1470)
++.+
T Consensus 239 v~~M---------------------------------------------------------------------------- 242 (500)
T COG1129 239 VRLM---------------------------------------------------------------------------- 242 (500)
T ss_pred HHHh----------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000475 964 LNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWY 1043 (1470)
Q Consensus 964 ~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~ 1043 (1470)
.|
T Consensus 243 -------------------vG----------------------------------------------------------- 244 (500)
T COG1129 243 -------------------VG----------------------------------------------------------- 244 (500)
T ss_pred -------------------hC-----------------------------------------------------------
Confidence 00
Q ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhH
Q 000475 1044 QVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTME 1123 (1470)
Q Consensus 1044 ~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1123 (1470)
T Consensus 245 -------------------------------------------------------------------------------- 244 (500)
T COG1129 245 -------------------------------------------------------------------------------- 244 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhc-CCCCCc
Q 000475 1124 WLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTN-IPSEAP 1202 (1470)
Q Consensus 1124 wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~-~~~E~~ 1202 (1470)
| +..+ .|. .
T Consensus 245 ------------------------------------------------------------------r--~~~~~~~~-~- 254 (500)
T COG1129 245 ------------------------------------------------------------------R--ELEDLFPE-P- 254 (500)
T ss_pred ------------------------------------------------------------------c--chhhhccc-c-
Confidence 0 0000 000 0
Q ss_pred cccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcC
Q 000475 1203 LVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDG 1282 (1470)
Q Consensus 1203 ~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG 1282 (1470)
+++ -+..-.++++|++.. ..++|+||++++||++||.|=-|||+|-++.+|||.-++.+|+|.+||
T Consensus 255 -------~~~-~~~~~~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G 320 (500)
T COG1129 255 -------PEE-GIGEPVLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDG 320 (500)
T ss_pred -------ccc-CCCCcEEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECC
Confidence 000 011224677777642 258999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHH-HHhcccEEEccCCC---CC-cccHHHhcCcC--CCCCHH-HHHHHHHHcCcHHHHHhcc---cccCcccc
Q 000475 1283 VDISMIGLQ-DLRSRLSIIPQDPM---LF-QGTVRTNLDPL--EQHSDQ-EIWEVINKCHLAEIVRQDQ---RLLDAPVA 1351 (1470)
Q Consensus 1283 ~dI~~i~l~-~LR~~isiIpQdp~---LF-~gTIR~NLdp~--~~~sd~-eI~~aL~~~~L~~~v~~lp---~gLdt~v~ 1351 (1470)
.++.--+++ ..+..|+|||-|-- +| .-+|++|+... ..++.. -+...-++.-..+++..+. ...+.++
T Consensus 321 ~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v- 399 (500)
T COG1129 321 KPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPI- 399 (500)
T ss_pred EEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchh-
Confidence 998887766 48999999999852 44 55999999532 111100 1222333333444555442 2334444
Q ss_pred CCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeC
Q 000475 1352 EDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDE 1429 (1470)
Q Consensus 1352 e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~ 1429 (1470)
.+||||.+|+++|||.|..+|+||||||||.++|..+.+.|.+.|++.. +|.+||+|+-.++.+.. ||||+||.+
T Consensus 400 ---~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~ 476 (500)
T COG1129 400 ---GTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMRE 476 (500)
T ss_pred ---hcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEEC
Confidence 4799999999999999999999999999999999999999999999865 67999999999999975 999999999
Q ss_pred CEEEEecChh
Q 000475 1430 GKVLEYDSPR 1439 (1470)
Q Consensus 1430 G~vvE~g~p~ 1439 (1470)
|+++..=+..
T Consensus 477 Gri~~e~~~~ 486 (500)
T COG1129 477 GRIVGELDRE 486 (500)
T ss_pred CEEEEEeccc
Confidence 9998754433
No 96
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-54 Score=486.50 Aligned_cols=525 Identities=17% Similarity=0.269 Sum_probs=393.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 283 FAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVE--SLTQRQWYFGANRIGIRVRSALTVLIYKR 360 (1470)
Q Consensus 283 ~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~--~l~~~~~~~~~~r~g~rir~~L~~~iy~K 360 (1470)
+..+.-++...-|.+.+.+++-+..+.. +.+..-+.++.+.|+-.... .+..+--.|..-++..----.+-..+|++
T Consensus 223 ll~i~rli~~~~pi~~k~iv~~ltap~~-~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrH 301 (790)
T KOG0056|consen 223 LLIIGRLINVSLPILSKWIVDELTAPDT-FQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRH 301 (790)
T ss_pred HHHHHHHHhhhhHHhHHHHHHhhcCcch-hhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHH
Confidence 3334444555569999999988875443 33332233333322221110 11111111111111111122344566777
Q ss_pred hcccccC---CCCHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 000475 361 SMAIKFA---GPSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSNTPLA 436 (1470)
Q Consensus 361 ~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~~-~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i~~~~~~~~~ 436 (1470)
.+.||.. .|.+||+...|..-.+.+. +..+ +..+-...+.++++++..+....+|-.++.++.|.+..-+...+.
T Consensus 302 lh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iT 380 (790)
T KOG0056|consen 302 LHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIKIT 380 (790)
T ss_pred HHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeeeee
Confidence 7776643 4589999999987777666 3333 334444556777777777767776666766666666666677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 437 NRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQE----FLKKLLRLREIERDSLKKYLYTCSAIAFLFWASPTLV 512 (1470)
Q Consensus 437 ~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~----f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v 512 (1470)
....++|+++..+-.+--....+.|-|..++|.|+.|+. +.+.|.+..++|-+.+.....+......++-. -+.
T Consensus 381 eWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~l--gll 458 (790)
T KOG0056|consen 381 EWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGL--GLL 458 (790)
T ss_pred hhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh--HHh
Confidence 777888888877766655666788899999999999875 56667777777776655444433222222111 122
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CCCCCCCCCCCCCCccE
Q 000475 513 SVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDN-QKKPITEPTSKASDVAI 591 (1470)
Q Consensus 513 ~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e-~~~~~~~~~~~~~~~~i 591 (1470)
....+.+|.+..+.++.|...-+..++-.+.+|++.+.....+++...+-.+|+-+.+++++ -.|.....|.......|
T Consensus 459 ~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~~~G~i 538 (790)
T KOG0056|consen 459 AGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKVTQGKI 538 (790)
T ss_pred hhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccccCCeE
Confidence 23335556666788999999999999999999999999999999999999999999998765 22322223333445679
Q ss_pred EEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE----------
Q 000475 592 DIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK---------- 660 (1470)
Q Consensus 592 ~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~---------- 660 (1470)
+++|++|+|+++ +|+|+| ||++.+|+.+|+|||+|+||||+++.|.+.++..+|.+ .++|+
T Consensus 539 ~fsnvtF~Y~p~-------k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI-~iDgqdIrnvt~~SL 610 (790)
T KOG0056|consen 539 EFSNVTFAYDPG-------KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSI-TIDGQDIRNVTQSSL 610 (790)
T ss_pred EEEEeEEecCCC-------CceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceE-EEcCchHHHHHHHHH
Confidence 999999999965 789999 99999999999999999999999999999999999986 88884
Q ss_pred ---eEEEcCCCCCCCccHHHHHhcCCCC-CHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHc
Q 000475 661 ---KAYVPQSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVY 736 (1470)
Q Consensus 661 ---~ayv~Q~~~i~~~Ti~eNI~~g~~~-~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~ 736 (1470)
+|.|||+..+||.||..||.+|++- ..+...++.++.+.++.+-.+|+|+.|.+||||-.||||+|||||+||++.
T Consensus 611 Rs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiL 690 (790)
T KOG0056|consen 611 RSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTIL 690 (790)
T ss_pred HHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHh
Confidence 6999999999999999999999874 233344566888999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHHhhchhHHHH
Q 000475 737 SNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQNSELVR 816 (1470)
Q Consensus 737 ~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 816 (1470)
++|.|++|||.|||||.++++.| +.++..+.+++|.|+|.|+++.+-+||.|+++++|+|++.|+++|+..+.++.+++
T Consensus 691 K~P~iIlLDEATSALDT~tER~I-QaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~ 769 (790)
T KOG0056|consen 691 KAPSIILLDEATSALDTNTERAI-QAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYAD 769 (790)
T ss_pred cCCcEEEEcchhhhcCCccHHHH-HHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHH
Confidence 99999999999999999998888 56788888999999999999999999999999999999999999999865666666
Q ss_pred HHHH
Q 000475 817 QMKA 820 (1470)
Q Consensus 817 ~~~~ 820 (1470)
.-.+
T Consensus 770 MWq~ 773 (790)
T KOG0056|consen 770 MWQA 773 (790)
T ss_pred HHHH
Confidence 5543
No 97
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=6.5e-52 Score=477.96 Aligned_cols=528 Identities=21% Similarity=0.260 Sum_probs=415.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 263 TSLPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGA 342 (1470)
Q Consensus 263 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~ 342 (1470)
.....+....+++.++..++|..+-.+...++|+.+-++-|-+-...+ .+. -..+.++....++++.+++.--.+..
T Consensus 11 ~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s-~~T--Lv~Ltvlal~ly~~~glLd~iR~~~l 87 (580)
T COG4618 11 KNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRS-VPT--LVMLTVLALGLYAFQGLLDAIRSRVL 87 (580)
T ss_pred CchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCC-cch--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667777778888888888888888888999887776665543332 122 23344455555666667766677888
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccCCCCHHHHHHHHHHhHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 000475 343 NRIGIRVRSALTVLIYKRSMAIKFAGPSSGIIINMINVDVERIGDFFL-----YIHRIWLLPVQVFLALVILYKNLGAAP 417 (1470)
Q Consensus 343 ~r~g~rir~~L~~~iy~K~L~ls~~~~~~G~ivnlms~D~~~i~~~~~-----~~~~~w~~pl~i~~~~~lL~~~lG~~~ 417 (1470)
.|+|.++-..|...||.-+++.....+..|+-..- -.|.+.+..|+. -+.+....|+-+++ ++++--.+| +.
T Consensus 88 ~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~-LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v-~fl~Hp~lG-~~ 164 (580)
T COG4618 88 VRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQP-LRDLDQVRQFLTGTGLTAFFDAPWMPLYLAV-IFLFHPWLG-LI 164 (580)
T ss_pred HHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccc-hhhHHHHHHHHcCCCcchhcCCchHHHHHHH-HHHHHHHHH-HH
Confidence 99999999999999999987544444422221111 248888888864 34554445765543 345556788 78
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 418 AFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYT 497 (1470)
Q Consensus 418 ~l~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~ 497 (1470)
+++|.++++.+..+|-.++++ --++-.+..-+|....+-.++|..+|+.+|......++..+....-+.+..+....
T Consensus 165 a~~ga~iLv~la~ln~~~t~~---p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~ 241 (580)
T COG4618 165 ALAGAIILVVLALLNERATRK---PLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDR 241 (580)
T ss_pred HHHHHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 888888777777777776654 34455667778889999999999999999999999999888777666655544443
Q ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000475 498 CSAIAFLFWASPTL--VSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQ 575 (1470)
Q Consensus 498 ~~~~~~~~~~~p~~--v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~ 575 (1470)
......+.-..=.+ ..++..|.|+..++++|+|.+++.--+..-.-.|+...-....++..++.|.+|++++|.....
T Consensus 242 ~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~ 321 (580)
T COG4618 242 NGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPA 321 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 33332222222122 2234567788889999999999998888888899999999999999999999999999987653
Q ss_pred CCCCCCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcE
Q 000475 576 KKPITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAA 654 (1470)
Q Consensus 576 ~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~ 654 (1470)
.+.. .+.+..+..+.++++++.-|.. .++++++ ||++.+|+-++|+||+|||||||.++|.|..+|.+|.|
T Consensus 322 ~~~~--m~LP~P~g~L~Ve~l~~~PPg~------~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~V 393 (580)
T COG4618 322 AAER--MPLPAPQGALSVERLTAAPPGQ------KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSV 393 (580)
T ss_pred ccCC--CCCCCCCceeeEeeeeecCCCC------CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcE
Confidence 3322 2333445678999999976654 5799999 99999999999999999999999999999999999997
Q ss_pred EEECC-------------EeEEEcCCCCCCCccHHHHHh-cCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 655 IKVHG-------------KKAYVPQSSWIQTGTIRENIL-FGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 655 i~~~g-------------~~ayv~Q~~~i~~~Ti~eNI~-~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
+++| .+||.||+-.+|.|||.|||. |+.+.|.++.-++.+..+.++-+-.+|+|++|.||+.|.+
T Consensus 394 -RLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~ 472 (580)
T COG4618 394 -RLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGAT 472 (580)
T ss_pred -EecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCC
Confidence 8887 479999999999999999998 6667788877777777888888999999999999999999
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEe
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQS 800 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~ 800 (1470)
|||||||||+||||+|.||.+++||||-|+||.+-+..+.+-+..-..+|.|+|+|||+++.+..+|+|++|+||++...
T Consensus 473 LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~F 552 (580)
T COG4618 473 LSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAF 552 (580)
T ss_pred CCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhc
Confidence 99999999999999999999999999999999998888876544445579999999999999999999999999999999
Q ss_pred cChhhHHh
Q 000475 801 GKYEDLIA 808 (1470)
Q Consensus 801 g~~~~l~~ 808 (1470)
|+-+|.++
T Consensus 553 G~r~eVLa 560 (580)
T COG4618 553 GPREEVLA 560 (580)
T ss_pred CCHHHHHH
Confidence 99988876
No 98
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=8.9e-51 Score=513.77 Aligned_cols=504 Identities=15% Similarity=0.156 Sum_probs=352.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 265 LPQVIIHAVWKSLALNAAFAGVNTIASYIG-PFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGAN 343 (1470)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~-P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~ 343 (1470)
+++.+++.+++.++...++.++..++..+. |++.+.+++.+.+.. .. -+.+++.+++..++.. ...+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~~~---~~--~~~~~~~~~~~~~~~~----~~~~~~~ 73 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTSL---LV--LPEFLGLLLLLMAVTL----GSQLALT 73 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc---hH--HHHHHHHHHHHHHHHH----HHHHHHH
Confidence 566778888888888888888888888764 677788887553211 11 1111111111111111 2223344
Q ss_pred HHHHHHHHHHHHHHHHHhccccc---CCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000475 344 RIGIRVRSALTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFLYIHRIWLLPVQVFLALVILYKNLGAAPAFA 420 (1470)
Q Consensus 344 r~g~rir~~L~~~iy~K~L~ls~---~~~~~G~ivnlms~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~ 420 (1470)
+++.++...+...+|+|.++++. ...++|+++|.++.|++.+..++..+..++...+.+++++++++. +.|..+++
T Consensus 74 ~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~-~~~~l~li 152 (547)
T PRK10522 74 TLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAW-LSPKMLLV 152 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHH
Confidence 55666666677777888877654 344899999999999999998766666777777777777766664 34466676
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 421 ALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLS--WEQEFLKKLLRLREIERDSLKKYLYTC 498 (1470)
Q Consensus 421 ~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~--wE~~f~~~i~~~R~~E~~~l~~~~~~~ 498 (1470)
.++++++.+.+...+.++..+..++.++..+++.+.++|.++|++++++.+ .++.+.++.++..++-.+...+.....
T Consensus 153 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (547)
T PRK10522 153 TAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFH 232 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHH
Confidence 666666666777888888888889999999999999999999999997432 223444444443221111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000475 499 SAIAFLFWASPTLVSVITFGVCILLKT---PLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQ 575 (1470)
Q Consensus 499 ~~~~~~~~~~p~~v~~~~f~~~~~~~~---~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~ 575 (1470)
....... .++..+.++.+.+.++ ..+.+.+.....+...+..|+..+...+..+.+++++++|+.+++..+++
T Consensus 233 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~ 308 (547)
T PRK10522 233 LSAVNWS----NIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYK 308 (547)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 1111111 1111112222222221 12222222222223346789999999999999999999999999865432
Q ss_pred CCCCCCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcE
Q 000475 576 KKPITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAA 654 (1470)
Q Consensus 576 ~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~ 654 (1470)
++.....+. .....++++|++|+|+++ .+.+++ ||++++|++++|+||||||||||+++|+|+++|++|++
T Consensus 309 ~~~~~~~~~-~~~~~i~~~~v~f~y~~~-------~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i 380 (547)
T PRK10522 309 AEFPRPQAF-PDWQTLELRNVTFAYQDN-------GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEI 380 (547)
T ss_pred ccccccccc-CcCceEEEEEEEEEeCCC-------CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEE
Confidence 211111111 112469999999999743 357999 99999999999999999999999999999999999986
Q ss_pred EEECC-------------EeEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCC
Q 000475 655 IKVHG-------------KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINL 721 (1470)
Q Consensus 655 i~~~g-------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~L 721 (1470)
.++| .++||+|+|.+|++|++|| +.+.+++..+++++.+++..+++. ++|. .+|.+|
T Consensus 381 -~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~~L 450 (547)
T PRK10522 381 -LLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----ISNLKL 450 (547)
T ss_pred -EECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----CCCCCC
Confidence 7766 3699999999999999999 455566677777777777666542 3221 247899
Q ss_pred chHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCEEEEe
Q 000475 722 SGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDAADLVLVMKDGKIEQS 800 (1470)
Q Consensus 722 SGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~ 800 (1470)
|||||||++||||++++|+++|||||||+||+++++.+.+.+..... +++|+|+|||+++.+..||+|++|++|++++.
T Consensus 451 SgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 451 SKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999998888765443322 48999999999999999999999999999875
No 99
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4.3e-51 Score=561.11 Aligned_cols=476 Identities=19% Similarity=0.211 Sum_probs=350.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHH
Q 000475 942 FFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIIL 1021 (1470)
Q Consensus 942 ~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v 1021 (1470)
++.....+.....+.+.-..+...+++++++.+...++..++|+++|++++|++.++..+... ..+....+.+++.+++
T Consensus 137 l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~l 215 (1490)
T TIGR01271 137 LLLHPAIFGLHHLGMQMRIALFSLIYKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGL 215 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 333344445556666666777777899999999999999999999999999999999866543 3344555555555555
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHH
Q 000475 1022 MSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFL 1101 (1470)
Q Consensus 1022 ~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~ 1101 (1470)
+.....+..++.+.++++++.++ .+..+.....++..........+..+|.++|+++||.|++|+.|.
T Consensus 216 L~~~~G~~~l~~l~v~~~~~~~~------------~~~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~ 283 (1490)
T TIGR01271 216 IWELLEVNGFCGLGFLILLALFQ------------ACLGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAME 283 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHH
Confidence 44333333322222222332222 222233334444445556677889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 000475 1102 LRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQ-AWVIWNLCN 1180 (1470)
Q Consensus 1102 ~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~-~~~i~~~~~ 1180 (1470)
++..+.-+...+..........|..... .....+..++.+..+.+..+ .+++.+-.++++...+...+ ..+...+..
T Consensus 284 ~~i~~~R~~El~~~~~~~~~~~~~~~~~-~~~~~~~~~~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~ 361 (1490)
T TIGR01271 284 KIIKNIRQDELKLTRKIAYLRYFYSSAF-FFSGFFVVFLSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQT 361 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888776665444433332222221111 11111111111122222222 34544444444444444433 345666777
Q ss_pred HHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCC----------------------------
Q 000475 1181 VENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT---------------------------- 1232 (1470)
Q Consensus 1181 le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~---------------------------- 1232 (1470)
+....+|++||.+|++.++..+. +. + +....|+++|++|.|+..
T Consensus 362 ~~~a~~s~~RI~~fL~~~e~~~~--~~-----~-~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (1490)
T TIGR01271 362 WYDSLGAITKIQDFLCKEEYKTL--EY-----N-LTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSN 433 (1490)
T ss_pred HHHHHHHHHHHHHHhcCcccccc--cc-----c-CCCCceEEecceEecCCccccccccccccccccccccccccccccc
Confidence 88889999999999976543211 00 0 112358888888888421
Q ss_pred ----CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCc
Q 000475 1233 ----LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQ 1308 (1470)
Q Consensus 1233 ----~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~ 1308 (1470)
..++|+|+||+|++||+++|+|++|||||||+++|+|+++|++|+|.+|| +++|+||+|.+|+
T Consensus 434 ~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~~~~~~G~i~~~g-------------~iayv~Q~~~l~~ 500 (1490)
T TIGR01271 434 FSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGELEPSEGKIKHSG-------------RISFSPQTSWIMP 500 (1490)
T ss_pred cccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECC-------------EEEEEeCCCccCC
Confidence 13589999999999999999999999999999999999999999999998 5999999999999
Q ss_pred ccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCC
Q 000475 1309 GTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASID 1388 (1470)
Q Consensus 1309 gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD 1388 (1470)
+|||+|+.....+++++..++++.|+|.+.+..+|+|.+|.+|++|.+||||||||++||||++++|+|++||||||+||
T Consensus 501 ~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD 580 (1490)
T TIGR01271 501 GTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLD 580 (1490)
T ss_pred ccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCC
Confidence 99999998655667777888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-HHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHH
Q 000475 1389 TATDNVIQQ-TIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVA 1454 (1470)
Q Consensus 1389 ~~Td~~Iq~-~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~ 1454 (1470)
+++.+.|.+ .+++..+++|||+|||+++.+..||+|++|++|++++.|+++++.+. ++.|.+.+.
T Consensus 581 ~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l~~~-~~~~~~~~~ 646 (1490)
T TIGR01271 581 VVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSELQAK-RPDFSSLLL 646 (1490)
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHHHhc-ChHHHHHHh
Confidence 999999987 46777789999999999999999999999999999999999999864 456766653
No 100
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.4e-52 Score=486.16 Aligned_cols=439 Identities=24% Similarity=0.407 Sum_probs=339.0
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE-------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK------- 660 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~------- 660 (1470)
..+++++.+..|+. ...+++ ||++++||++|++|+||+|||||+++|.|.++|++|++ .++|+
T Consensus 3 ~~l~~~~itK~f~~--------~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI-~v~G~~v~~~sP 73 (501)
T COG3845 3 PALEMRGITKRFPG--------VVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEI-RVDGKEVRIKSP 73 (501)
T ss_pred ceEEEeccEEEcCC--------EEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceE-EECCEEeccCCH
Confidence 46899999999973 345667 99999999999999999999999999999999999996 89885
Q ss_pred -------eEEEcCCCCC-CCccHHHHHhcCCCCC----------HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCc
Q 000475 661 -------KAYVPQSSWI-QTGTIRENILFGKDMR----------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1470)
Q Consensus 661 -------~ayv~Q~~~i-~~~Ti~eNI~~g~~~~----------~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LS 722 (1470)
||+|+|++-+ .+.||.|||..|.+-. .++.++..+.+++.-| ..++..+||
T Consensus 74 ~dA~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vd-----------p~~~V~dLs 142 (501)
T COG3845 74 RDAIRLGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVD-----------PDAKVADLS 142 (501)
T ss_pred HHHHHcCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCC-----------ccceeecCC
Confidence 5999999887 5679999999998632 2334444445554433 336678999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000475 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 801 (1470)
=||||||.|-+|||++|+++|||||||.|-|...+++|+.+.+-...|+|||+|||.++++.. ||++.||+.|+++.
T Consensus 143 VG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvg-- 220 (501)
T COG3845 143 VGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVG-- 220 (501)
T ss_pred cchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEe--
Confidence 999999999999999999999999999999999999998654444569999999999999876 99999999999763
Q ss_pred ChhhHHhhchhHHHHHHHHhhhcccCCCCCCCCcccccCcccccchhhhhccCCCCCCCCCCCCccchhhcCcchHHHHH
Q 000475 802 KYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYS 881 (1470)
Q Consensus 802 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~ 881 (1470)
+++...+....+..+++
T Consensus 221 t~~~~~~~t~~ela~lM--------------------------------------------------------------- 237 (501)
T COG3845 221 TVDPVAETTEEELAELM--------------------------------------------------------------- 237 (501)
T ss_pred eecCCCCCCHHHHHHHh---------------------------------------------------------------
Confidence 22110000000000000
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHhhhhHHHHHhccccccccccchhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 882 AFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQR 961 (1470)
Q Consensus 882 ~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~ 961 (1470)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000475 962 LFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISI 1041 (1470)
Q Consensus 962 l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~ 1041 (1470)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000475 1042 WYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGT 1121 (1470)
Q Consensus 1042 ~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~ 1121 (1470)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCC
Q 000475 1122 MEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEA 1201 (1470)
Q Consensus 1122 ~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~ 1201 (1470)
..+ .+ ..+.+
T Consensus 238 -------------------------vG~-~v-------------------------------------------~~~~~- 247 (501)
T COG3845 238 -------------------------VGR-EV-------------------------------------------VLRVV- 247 (501)
T ss_pred -------------------------cCC-cc-------------------------------------------ccccc-
Confidence 000 00 00000
Q ss_pred ccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEc
Q 000475 1202 PLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILID 1281 (1470)
Q Consensus 1202 ~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~ID 1281 (1470)
. ++.-|..-.++++|+++.=+.+ -..++||||++++||++||.|-.|.|-+.|+.+|.|+..|.+|+|.++
T Consensus 248 -------~-~~~~pg~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~ 318 (501)
T COG3845 248 -------K-PPSTPGEVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLN 318 (501)
T ss_pred -------c-CCCCCCCeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEEC
Confidence 0 1111333468999999875443 358999999999999999999999999999999999999999999999
Q ss_pred CEeC-CCCCHHHHh-cccEEEccCCC----CCcccHHHhcCcCCCC----------CHHHHHHHHHHcCcHHHHHh---c
Q 000475 1282 GVDI-SMIGLQDLR-SRLSIIPQDPM----LFQGTVRTNLDPLEQH----------SDQEIWEVINKCHLAEIVRQ---D 1342 (1470)
Q Consensus 1282 G~dI-~~i~l~~LR-~~isiIpQdp~----LF~gTIR~NLdp~~~~----------sd~eI~~aL~~~~L~~~v~~---l 1342 (1470)
|.|+ ...+....| ..+++||.|.. ..+-|+.+|+-+.... .-.++.+..+ +.+++ .
T Consensus 319 G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~-----~li~~fdVr 393 (501)
T COG3845 319 GKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFAR-----ELIEEFDVR 393 (501)
T ss_pred CEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHH-----HHHHHcCcc
Confidence 9998 667777755 57999999983 5667999998542211 1223322221 11211 1
Q ss_pred ccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-
Q 000475 1343 QRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID- 1420 (1470)
Q Consensus 1343 p~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~- 1420 (1470)
+.+.++++ .+||||+.|++-+||-|.++|++||..+||-+||..+.+.|++.|.+.. +|+.|+.|+-+++.+..
T Consensus 394 ~~~~~~~a----~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~l 469 (501)
T COG3845 394 APSPDAPA----RSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILEL 469 (501)
T ss_pred CCCCCcch----hhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHh
Confidence 23344444 4799999999999999999999999999999999999999999888754 78999999999999977
Q ss_pred cCEEEEEeCCEEEEecChhH
Q 000475 1421 NDLVLVLDEGKVLEYDSPRQ 1440 (1470)
Q Consensus 1421 ~DrIlvL~~G~vvE~g~p~~ 1440 (1470)
||||.||.+|+++....|++
T Consensus 470 sDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 470 SDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred hheeeeeeCCceeccccccc
Confidence 99999999999998888776
No 101
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.6e-53 Score=488.81 Aligned_cols=238 Identities=38% Similarity=0.649 Sum_probs=229.2
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
|.|+++|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ ++|+|.+||.|+.+++.+++|+++
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999997666679999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000475 1298 SIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRI 1377 (1470)
Q Consensus 1298 siIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1377 (1470)
+||||+|.+|++|+++|++|+...+++++|++++.+++.+++..+|+++|+.++++|.+||+|||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999999877889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHH
Q 000475 1378 LVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1457 (1470)
Q Consensus 1378 LlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~~~ 1457 (1470)
|+|||||++||+.++..+++.|++.+.+||||+||||++++..||||++|++|+++|+|+|++|+++ .+.|++++.+..
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhhcc
Confidence 9999999999999999999999998889999999999999999999999999999999999999985 589999998776
No 102
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=9e-49 Score=501.95 Aligned_cols=501 Identities=17% Similarity=0.160 Sum_probs=371.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 276 SLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSY-HYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALT 354 (1470)
Q Consensus 276 ~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~-~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~rir~~L~ 354 (1470)
.+++..++.++.+++....|++.+.+++.+.+.+. ... ...+.+++++++..++.++ ..|...++..++|..++
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~-~~f~~~l~~~~l~~~~~~~~~~~----~~~~~~~~~~~~r~~l~ 171 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSP-RNFAWILFKWFLIAPPASFINSA----IKYLLKELKLRFRVRLT 171 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
Confidence 56677778888899999999999999998764331 111 1011222223333333333 33445556666666666
Q ss_pred HHHHHHhccc----c--cCCCCHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 000475 355 VLIYKRSMAI----K--FAGPSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIF 427 (1470)
Q Consensus 355 ~~iy~K~L~l----s--~~~~~~G~ivnlms~D~~~i~~~~~~-~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i 427 (1470)
..++++.++- + ..+..+|++.+.+++|++.+.+.+.. +..+...++.++.+++.++..++|..+++.++.+++
T Consensus 172 ~~l~~~~~~~~~~~~~~~~d~~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l 251 (659)
T TIGR00954 172 RYLYSKYLSGFTFYKVSNLDSRIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFA 251 (659)
T ss_pred HHHHHHHhCCCceEEeccCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 6666655542 2 11225799999999999999887754 445666677777788888877886666666677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 428 VMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWA 507 (1470)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~ 507 (1470)
.+.+...+.++..+...+..+..++-....+|.++|+++||.|+-|+...+++++.-++-.+...+.....+....+...
T Consensus 252 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 331 (659)
T TIGR00954 252 TGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNI 331 (659)
T ss_pred HHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 77888889999999999999999999999999999999999999999988888776544444444444333333222221
Q ss_pred HH----HHHHHHHHHHHHHh-c----CCCCHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 000475 508 SP----TLVSVITFGVCILL-K----TPLTSGAVLS-AL---ATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDN 574 (1470)
Q Consensus 508 ~p----~~v~~~~f~~~~~~-~----~~L~~~~vft-~l---~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e 574 (1470)
.. ..+..+..+..++. . +.+|.+..+. ++ .++..+..|+..+...+..+.++.++.+|+.++++.++
T Consensus 332 i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~ 411 (659)
T TIGR00954 332 VAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLD 411 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 12222222232332 1 5688876554 33 34667789999999999999999999999999997532
Q ss_pred CCC-------CCCC-----------------CCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEE
Q 000475 575 QKK-------PITE-----------------PTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVC 629 (1470)
Q Consensus 575 ~~~-------~~~~-----------------~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~iv 629 (1470)
+.+ .... .........|+++|++|+|+++ .+.+++ ||++++||+++|+
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-------~~il~~isl~i~~Ge~~~Iv 484 (659)
T TIGR00954 412 DVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-------DVLIESLSFEVPSGNHLLIC 484 (659)
T ss_pred HHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-------CeeeecceEEECCCCEEEEE
Confidence 100 0000 0001122459999999999633 357899 9999999999999
Q ss_pred cCCCCChHHHHHHHhCCCcCCCCcEEEEC--CEeEEEcCCCCCCCccHHHHHhcCC--------CCCHHHHHHHHHHhcc
Q 000475 630 GSVGSGKSSLLSSILGEIPRISGAAIKVH--GKKAYVPQSSWIQTGTIRENILFGK--------DMRQSFYEEVLEGCAL 699 (1470)
Q Consensus 630 G~~GsGKSTLl~~llG~~~~~~G~~i~~~--g~~ayv~Q~~~i~~~Ti~eNI~~g~--------~~~~~~y~~v~~~~~l 699 (1470)
||||||||||+++|+|+++|.+|++ ..+ ..++||+|+|+++++|++|||.++. ...+++.+++++.+++
T Consensus 485 G~nGsGKSTLl~lL~Gl~~~~~G~i-~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l 563 (659)
T TIGR00954 485 GPNGCGKSSLFRILGELWPVYGGRL-TKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQL 563 (659)
T ss_pred CCCCCCHHHHHHHHhCCCCCCCCeE-eecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCC
Confidence 9999999999999999999999986 554 3689999999999999999999974 2345667788999999
Q ss_pred hHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCC
Q 000475 700 NQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQ 779 (1470)
Q Consensus 700 ~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~ 779 (1470)
.+.++. |.|.+|..+ .+.+||||||||++||||++++|+++|||||||+||+++...+.+. ++. .++|+|+|||+
T Consensus 564 ~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~-l~~--~~~tvI~isH~ 638 (659)
T TIGR00954 564 THILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRL-CRE--FGITLFSVSHR 638 (659)
T ss_pred HHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHH--cCCEEEEEeCc
Confidence 887776 888888876 5779999999999999999999999999999999999998887654 443 38999999999
Q ss_pred cchhhhcCEEEEEeC
Q 000475 780 LEFLDAADLVLVMKD 794 (1470)
Q Consensus 780 ~~~l~~~d~i~~l~~ 794 (1470)
++.++.||+|++|++
T Consensus 639 ~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 639 KSLWKYHEYLLYMDG 653 (659)
T ss_pred hHHHHhCCEEEEEeC
Confidence 999989999999973
No 103
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-49 Score=467.86 Aligned_cols=259 Identities=21% Similarity=0.369 Sum_probs=222.6
Q ss_pred HhhhHHHHHHHHhcCCCCCccccC------CCCC---CCCCCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEE
Q 000475 1183 NKMISVERILQFTNIPSEAPLVIK------NSRP---SPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVV 1253 (1470)
Q Consensus 1183 ~~~~sveRi~~~~~~~~E~~~~~~------~~~~---~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIV 1253 (1470)
+.+.+++|+.+|...+.|.....+ +..+ +..||..+.|+++|++++|+++.+++|+|+||+|++||++||+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~Iv 114 (329)
T PRK14257 35 QKLNKYQRAFAWLKLPKQKKAELKQFLNKKKTQVDLLKEDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFI 114 (329)
T ss_pred hccccccchhhHHhcccccchhhhhcccccccccccccCCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEE
Confidence 456778888888776655432111 1111 3469999999999999999765567999999999999999999
Q ss_pred CCCCCCHHHHHHHHhcCCC-----CCCcEEEEcCEeCC--CCCHHHHhcccEEEccCCCCCcccHHHhcC--c-CCCCCH
Q 000475 1254 GRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDIS--MIGLQDLRSRLSIIPQDPMLFQGTVRTNLD--P-LEQHSD 1323 (1470)
Q Consensus 1254 GrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~--~i~l~~LR~~isiIpQdp~LF~gTIR~NLd--p-~~~~sd 1323 (1470)
||||||||||+++|+|+++ |++|+|.|||+|+. ++++.++|++++|+||+|.+|++|+++|++ | +..+++
T Consensus 115 G~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~ 194 (329)
T PRK14257 115 GPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGIND 194 (329)
T ss_pred CCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCCh
Confidence 9999999999999999997 57999999999997 466788999999999999999999999998 3 234555
Q ss_pred HHH-----HHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHH
Q 000475 1324 QEI-----WEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQT 1398 (1470)
Q Consensus 1324 ~eI-----~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~ 1398 (1470)
++. .++++.++++ +++++.+++.|.+||||||||+|||||++++|+||+|||||++||+++++.+++.
T Consensus 195 ~~~~~~~~~~~l~~~~L~-------~~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~ 267 (329)
T PRK14257 195 RKILEKIVEKSLKSAALW-------DEVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEEL 267 (329)
T ss_pred HHHHHHHHHHHHHHcCCc-------chhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 554 4566777764 3456778899999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCCh
Q 000475 1399 IREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSS 1448 (1470)
Q Consensus 1399 I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s~ 1448 (1470)
|++.++++|+|+||||++++.+ ||||+||++|+|+|.|+|+++++++...
T Consensus 268 i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~~~~~ 318 (329)
T PRK14257 268 ILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIHPKNK 318 (329)
T ss_pred HHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCCcH
Confidence 9999889999999999999998 9999999999999999999999876543
No 104
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-47 Score=432.63 Aligned_cols=452 Identities=22% Similarity=0.294 Sum_probs=350.8
Q ss_pred HHHHHHHHhcccccC---CCCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 000475 353 LTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLYI-HRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFV 428 (1470)
Q Consensus 353 L~~~iy~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~~~-~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~~~~i~ 428 (1470)
+.-..|++.+.|+-. ++.+|.+.--+..-.+.|+...+++ ..+....+++++..+++++..||+.+...++++++.
T Consensus 17 la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~t~vtv~lY 96 (497)
T COG5265 17 LAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALTTLVTVILY 96 (497)
T ss_pred HHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHH
Confidence 334446666665532 2355555444444455566555543 345556689999999999999988888887777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Q 000475 429 MVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLRE----IERDSLKKYLYTCSAIAFL 504 (1470)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~----~E~~~l~~~~~~~~~~~~~ 504 (1470)
..+........-.++++..++-.+-....-+.|-|..++|.|+-|+.+..+..+..+ .+++......++...-..+
T Consensus 97 ~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~Ln~gQ~~I 176 (497)
T COG5265 97 LLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVLNFGQTAI 176 (497)
T ss_pred HHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 777666666666666666555555556677999999999999999988777665533 3332222222221111111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CCCCCCCCC
Q 000475 505 FWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDN-QKKPITEPT 583 (1470)
Q Consensus 505 ~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e-~~~~~~~~~ 583 (1470)
+.. .+....+....-+..+.+|.+...-.-++...+..|++.+......+.|++.-.+++.+.+..+- ..+....++
T Consensus 177 ~~~--~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~pda~~ 254 (497)
T COG5265 177 FST--GLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDAPDAPP 254 (497)
T ss_pred HHH--HHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccCCCCcc
Confidence 111 11112233333455778999999999999999999999999999999999999999998887653 222211111
Q ss_pred CC-CCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE-
Q 000475 584 SK-ASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK- 660 (1470)
Q Consensus 584 ~~-~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~- 660 (1470)
-. .....|.+++++|.|+++ .+.|++ ++.+++|+.++|+|++|+||||+++.|.+.+++.+|.+ .++|+
T Consensus 255 L~~~~~g~v~F~~V~F~y~~~-------r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I-~id~qd 326 (497)
T COG5265 255 LWPVRLGAVAFINVSFAYDPR-------RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSI-TIDGQD 326 (497)
T ss_pred ccccccceEEEEEEEeecccc-------chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceE-EEcchh
Confidence 11 334579999999999865 688999 99999999999999999999999999999999999986 88874
Q ss_pred ------------eEEEcCCCCCCCccHHHHHhcCCCC-CHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHH
Q 000475 661 ------------KAYVPQSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQ 727 (1470)
Q Consensus 661 ------------~ayv~Q~~~i~~~Ti~eNI~~g~~~-~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 727 (1470)
+|.|||+..+||.|+..||.+|++. .++...++.++..+.+.++.+|+|.+|.+||+|-.|||||||
T Consensus 327 ir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekq 406 (497)
T COG5265 327 IRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQ 406 (497)
T ss_pred HHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHH
Confidence 6999999999999999999999875 455566778889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHH
Q 000475 728 RIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLI 807 (1470)
Q Consensus 728 Rv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 807 (1470)
||++||++.++|+|++|||.|||||.||++.|-. .++...+|+|.+++.|+++.+-.||.|+||++|+|++.|++++++
T Consensus 407 rvaiar~ilk~p~il~~deatsaldt~te~~iq~-~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ll 485 (497)
T COG5265 407 RVAIARTILKNPPILILDEATSALDTHTEQAIQA-ALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEELL 485 (497)
T ss_pred HHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHH-HHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHHHH
Confidence 9999999999999999999999999999888854 566677899999999999999999999999999999999999999
Q ss_pred hhchhHHHH
Q 000475 808 ADQNSELVR 816 (1470)
Q Consensus 808 ~~~~~~~~~ 816 (1470)
+ .++.+++
T Consensus 486 ~-~~g~ya~ 493 (497)
T COG5265 486 A-AGGLYAE 493 (497)
T ss_pred H-cCChHHH
Confidence 8 4555543
No 105
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=3.4e-46 Score=433.00 Aligned_cols=194 Identities=24% Similarity=0.392 Sum_probs=162.1
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|.++||+|+|.++ |.++++++|-|..+++|++|||||+|||||++++.+.+.|+.|.+.-.-.. +++
T Consensus 389 vi~~~nv~F~y~~~-~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDN-PMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------KLP 456 (614)
T ss_pred eEEEeccccCCCCc-chhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------cch
Confidence 58999999999866 479999999999999999999999999999999999999999987543221 233
Q ss_pred EEcc---CCCCCcccHHHhcCc-CC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHcc
Q 000475 1299 IIPQ---DPMLFQGTVRTNLDP-LE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1373 (1470)
Q Consensus 1299 iIpQ---dp~LF~gTIR~NLdp-~~-~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1373 (1470)
+.-| +-.-++-|.-+++.| +. .-..+++...|.++||.... .+.++ ++||+|||.|+++||++++
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~------q~~p~----~~LS~Gqr~rVlFa~l~~k 526 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDA------QVVPM----SQLSDGQRRRVLFARLAVK 526 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccc------cccch----hhcccccchhHHHHHHHhc
Confidence 3334 334566677777765 33 35667788899999986433 34445 4799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1374 KKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1374 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
+|.||||||||++||.+|-..+.++|.+. ..+||+|+|+...|.. +++|++.++|.+..++
T Consensus 527 qP~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~ 588 (614)
T KOG0927|consen 527 QPHLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWD 588 (614)
T ss_pred CCcEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeecC
Confidence 99999999999999999999999999875 5599999999999977 9999999999987763
No 106
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-45 Score=384.69 Aligned_cols=217 Identities=29% Similarity=0.459 Sum_probs=194.3
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCC-CCHHHHhccc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM-IGLQDLRSRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~-i~l~~LR~~i 1297 (1470)
-|+++|++.+|... .||||||++|++||++.|+||||||||||+++|.+|.+|++|+|.|||.++.. ..+..+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 48999999999754 59999999999999999999999999999999999999999999999987743 3788899999
Q ss_pred EEEccCCCCCcc-cHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
|+|+|...||+. |+-+|+... ...+ .+.-.+.|+++||.|....-|. .|||||+||++||
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQRVAIA 148 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPA-----------QLSGGQQQRVAIA 148 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----------ccCcHHHHHHHHH
Confidence 999999999987 999998632 1222 3335677999999998877764 5899999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNS 1446 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~ 1446 (1470)
|||.-+|+|+++|||||+|||+.-..+.+++++.. .|.|.|+|||.+....+ +|||+.||+|+++|.|+|+++..++.
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~ 228 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPK 228 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCC
Confidence 99999999999999999999999999999998865 57899999999999988 99999999999999999999999876
Q ss_pred Ch
Q 000475 1447 SS 1448 (1470)
Q Consensus 1447 s~ 1448 (1470)
+.
T Consensus 229 ~~ 230 (240)
T COG1126 229 SE 230 (240)
T ss_pred CH
Confidence 54
No 107
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-45 Score=402.54 Aligned_cols=225 Identities=28% Similarity=0.475 Sum_probs=196.6
Q ss_pred EEEEeEEEEeCCC---CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCC---HHHH
Q 000475 1220 IELENLLVQYNPT---LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG---LQDL 1293 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~---~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~---l~~L 1293 (1470)
|+++||++.|... .+.+|+||||+|++||+.||+|+||+|||||++++-++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7999999999762 357999999999999999999999999999999999999999999999999888876 5667
Q ss_pred hcccEEEccCCCCCc-ccHHHhcC-cCC--CCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000475 1294 RSRLSIIPQDPMLFQ-GTVRTNLD-PLE--QHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1365 (1470)
Q Consensus 1294 R~~isiIpQdp~LF~-gTIR~NLd-p~~--~~sd~----eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl 1365 (1470)
|++||+|+|++-|++ -||.+|+. |.. ..+.+ .+.+.|+.+||.|...+-| .+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 899999999999998 59999996 542 34444 4567888898887665544 57999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1366 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1366 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
+|||||..+|+||+.|||||+|||+|.+.|.+.|++.. -|-||++|+|.++.+++ ||||.||++|+|+|.|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999888643 47899999999999988 9999999999999999999999
Q ss_pred hcCCCh-HHHHHHH
Q 000475 1443 EDNSSS-FSKLVAE 1455 (1470)
Q Consensus 1443 ~~~~s~-f~~lv~~ 1455 (1470)
.+|... =.+++.+
T Consensus 231 ~~Pk~~~t~~fi~~ 244 (339)
T COG1135 231 ANPKHAITQEFIGE 244 (339)
T ss_pred cCcchHHHHHHHHh
Confidence 988543 3344443
No 108
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=3.2e-44 Score=411.08 Aligned_cols=240 Identities=48% Similarity=0.771 Sum_probs=224.1
Q ss_pred CCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhc
Q 000475 1216 SSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRS 1295 (1470)
Q Consensus 1216 ~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~ 1295 (1470)
..|.|+++|++++|+.....+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 46789999999999754346999999999999999999999999999999999999999999999999999998889999
Q ss_pred ccEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCC
Q 000475 1296 RLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1375 (1470)
Q Consensus 1296 ~isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1375 (1470)
+++|+||+|.+|++|+++|+++.....+++++++++.+++.+.+..+|.|+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876555677789999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHH
Q 000475 1376 RILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAE 1455 (1470)
Q Consensus 1376 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~~ 1455 (1470)
++|+|||||++||+++.+.+.+.|++..+++|+|+++|+++.+..||||++|++|++++.|+++++.+.+++.|+.++.+
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 255 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVRT 255 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHhc
Confidence 99999999999999999999999998777899999999999998999999999999999999999998777888877653
No 109
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.1e-43 Score=406.41 Aligned_cols=194 Identities=22% Similarity=0.335 Sum_probs=165.9
Q ss_pred CCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhc
Q 000475 1216 SSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRS 1295 (1470)
Q Consensus 1216 ~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~ 1295 (1470)
+...+++.+|+|.|.|+.++.++++++.++.-+++++||++|.||||+++++.+-.+|..|.+.+.+ |.
T Consensus 359 ~~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ 427 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RL 427 (582)
T ss_pred CCCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cc
Confidence 3446999999999999887899999999999999999999999999999999999999999988876 78
Q ss_pred ccEEEccCCCCCcccHHHhcC-------cCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1296 RLSIIPQDPMLFQGTVRTNLD-------PLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1296 ~isiIpQdp~LF~gTIR~NLd-------p~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
+|++-.|.-+=| ..-|.. -+...+++|+.+.|...|+...+... + + ..||||||-|+++|
T Consensus 428 ri~~f~Qhhvd~---l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~-----s-i----~~LSGGQKsrvafA 494 (582)
T KOG0062|consen 428 RIKYFAQHHVDF---LDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQ-----S-I----ASLSGGQKSRVAFA 494 (582)
T ss_pred eecchhHhhhhH---HHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhc-----c-c----cccCCcchhHHHHH
Confidence 999999976533 222321 12334899999999998876544322 1 2 45999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEY 1435 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~ 1435 (1470)
-....+|.+|||||||++||.++-..+-++|+.. +.-||+|+|+.+.|.. |+-+++.++|+|.-+
T Consensus 495 ~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F--~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~i 560 (582)
T KOG0062|consen 495 ACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF--NGGVVLVSHDEEFISSLCKELWVVEDGKVTPI 560 (582)
T ss_pred HHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc--CCcEEEEECcHHHHhhcCceeEEEcCCcEEee
Confidence 9999999999999999999999999999999874 3479999999999977 999999999999864
No 110
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.4e-43 Score=398.35 Aligned_cols=234 Identities=31% Similarity=0.541 Sum_probs=215.3
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+.+..++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999998888889999999
Q ss_pred EccCCCCCcccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 000475 1300 IPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRIL 1378 (1470)
Q Consensus 1300 IpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1378 (1470)
+||+|.+|+.|+++|+.... ..+.+++.++++..++.+++..+|.++++.....+.+||||||||++||||++++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999999999997543 34566788888999999999999999999888889999999999999999999999999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHH
Q 000475 1379 VLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVA 1454 (1470)
Q Consensus 1379 lLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~ 1454 (1470)
+|||||++||+.+...+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|++++++++ .+.|+.+++
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 235 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQ 235 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHh
Confidence 999999999999999999999988778999999999999988999999999999999999999975 577777654
No 111
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.3e-44 Score=371.03 Aligned_cols=220 Identities=26% Similarity=0.428 Sum_probs=198.7
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCC-----cEEEEcCEeCCC--CCH
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSG-----GRILIDGVDISM--IGL 1290 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~-----G~I~IDG~dI~~--i~l 1290 (1470)
..++++|+++.|.. ..+|+|||+.|++++.+|++|||||||||++++|-|+.+..+ |+|.+||.||.+ ++.
T Consensus 6 ~~~~~~~l~~yYg~--~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGD--KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECc--hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 46899999999974 359999999999999999999999999999999999999875 999999999987 568
Q ss_pred HHHhcccEEEccCCCCCcccHHHhcCcCC---C----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1291 QDLRSRLSIIPQDPMLFQGTVRTNLDPLE---Q----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1291 ~~LR~~isiIpQdp~LF~gTIR~NLdp~~---~----~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
-+||+++|+|.|.|.-|..||++|+.... . .-|+-+.++|+++.|||.|.. .|+ +.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD---rL~----~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD---RLH----KSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH---Hhh----CCccCCChhHHH
Confidence 89999999999999999999999997531 1 124557889999999999864 343 455679999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
||||||||.-+|+||+||||||+|||-+...|.+.|.+..++-|||+|||.+.-... +|+...+-.|+++|+|..+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999999999999999998766 9999999999999999999999
Q ss_pred hcCC
Q 000475 1443 EDNS 1446 (1470)
Q Consensus 1443 ~~~~ 1446 (1470)
.+|.
T Consensus 237 ~~P~ 240 (253)
T COG1117 237 TNPK 240 (253)
T ss_pred cCcc
Confidence 8764
No 112
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.4e-43 Score=392.46 Aligned_cols=221 Identities=60% Similarity=0.967 Sum_probs=209.4
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
|.|+++|++++|+.+..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 56899999999975444699999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000475 1298 SIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRI 1377 (1470)
Q Consensus 1298 siIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1377 (1470)
+|+||+|.+|++|+++|++++...+++++.++++..++.+++..+|.|+++..++.+.+||+|||||++|||||+++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998777778889999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecCh
Q 000475 1378 LVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSP 1438 (1470)
Q Consensus 1378 LlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p 1438 (1470)
|+|||||++||+.+.+.+.+.|++..++.|||+++|+++.+..||+|++|++|++++.|++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999987778999999999999999999999999999998864
No 113
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-42 Score=409.57 Aligned_cols=262 Identities=21% Similarity=0.305 Sum_probs=218.0
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CCCCCCCCCCCCCCccEEEeeeEEEeCC
Q 000475 524 KTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDN-QKKPITEPTSKASDVAIDIEAGEYAWDA 602 (1470)
Q Consensus 524 ~~~L~~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e-~~~~~~~~~~~~~~~~i~~~~~~f~w~~ 602 (1470)
.+++++.++|+.++.|+.+..|+..+|..... ..|+++|+..++ +...... .......|+++|++++|+.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~nls~~y~~ 92 (329)
T PRK14257 22 LNELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKE--DFNHANVFEIRNFNFWYMN 92 (329)
T ss_pred cchhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccC--CCCcCceEEEEeeEEEecC
Confidence 35689999999999999999999888765443 569999988766 2211111 1123457999999999974
Q ss_pred CccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCc-----CCCCcEEEE---------------CCEe
Q 000475 603 REENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKV---------------HGKK 661 (1470)
Q Consensus 603 ~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~---------------~g~~ 661 (1470)
. ..+.|++ ||+|++||+++|+|+||||||||+++|+|+++ |++|++ .+ .+.+
T Consensus 93 ~------~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I-~idG~~i~~~~~~~~~lr~~i 165 (329)
T PRK14257 93 R------TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEI-YFLGTNTRSKKISSLELRTRI 165 (329)
T ss_pred C------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEE-EECCEEccccccchHhhhccE
Confidence 3 2468999 99999999999999999999999999999986 468975 43 3458
Q ss_pred EEEcCCCCCCCccHHHHHhcCCCCC----HH----HHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHH
Q 000475 662 AYVPQSSWIQTGTIRENILFGKDMR----QS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLAR 733 (1470)
Q Consensus 662 ayv~Q~~~i~~~Ti~eNI~~g~~~~----~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LAR 733 (1470)
+||||+||++++|++|||.|+..++ ++ .++++++.|++..+++ +.+++++.+|||||||||+|||
T Consensus 166 ~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~-------~~~~~~~~~LSgGqkqRl~LAR 238 (329)
T PRK14257 166 GMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVK-------DDLDKAGNALSGGQQQRLCIAR 238 (329)
T ss_pred EEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhh-------hhhhCCcccCCHHHHHHHHHHH
Confidence 9999999999999999999875322 22 2677788888765543 5688999999999999999999
Q ss_pred HHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhhHHhh
Q 000475 734 AVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLIAD 809 (1470)
Q Consensus 734 Al~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 809 (1470)
|++++|+|+||||||+|||+++..++ .+++..+.+++|+|+|||+++++.. ||+|++|++|+|++.|+++++...
T Consensus 239 Al~~~p~IlLLDEPts~LD~~~~~~i-~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~ 314 (329)
T PRK14257 239 AIALEPEVLLMDEPTSALDPIATAKI-EELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIH 314 (329)
T ss_pred HHHhCCCEEEEeCCcccCCHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999998875 5678777778999999999999887 999999999999999999998763
No 114
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.5e-43 Score=372.20 Aligned_cols=217 Identities=30% Similarity=0.484 Sum_probs=195.9
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+|+||+++|.+ ..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++|||
T Consensus 2 I~~~nvsk~y~~--~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGN--KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCC--ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 799999999973 469999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCCCcc-cHHHhcCcC---CCCC----HHHHHHHHHHcCcH--HHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1300 IPQDPMLFQG-TVRTNLDPL---EQHS----DQEIWEVINKCHLA--EIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~--~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
|-|.--||.. ||.+|+..- ...+ ++++.|.|+.+||. +|..+.| ..|||||+||+.+||
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~R 148 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHHH
Confidence 9999999977 999999632 2233 45577888899985 4666665 358999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNS 1446 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~ 1446 (1470)
||..+|+||+||||.++||+-|...+|+-+.+.. -++|+|+|||+++.... +|||.||++|+++.+|+|++++++|.
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pa 228 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPA 228 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCcc
Confidence 9999999999999999999999999999887643 37899999999998655 99999999999999999999999988
Q ss_pred ChH
Q 000475 1447 SSF 1449 (1470)
Q Consensus 1447 s~f 1449 (1470)
..|
T Consensus 229 n~F 231 (309)
T COG1125 229 NDF 231 (309)
T ss_pred HHH
Confidence 777
No 115
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-41 Score=385.60 Aligned_cols=231 Identities=33% Similarity=0.538 Sum_probs=211.6
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+....++++|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999996543359999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 000475 1300 IPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRIL 1378 (1470)
Q Consensus 1300 IpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1378 (1470)
+||+|.+|..|+++|+... ..++.+++.+.++.+++.+++..+|.++++.......+||+|||||++|||||+++|+++
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999754 334566777888899999999999999999888888999999999999999999999999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHH
Q 000475 1379 VLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSK 1451 (1470)
Q Consensus 1379 lLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~ 1451 (1470)
+|||||++||+.+...+.+.|++..++.|||+++|+++.+..||+|++|++|++++.|+++++.++ .+.|+.
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~ 232 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYAK 232 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchhh
Confidence 999999999999999999999988788999999999999988999999999999999999999864 455544
No 116
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.3e-41 Score=377.24 Aligned_cols=207 Identities=61% Similarity=0.972 Sum_probs=188.8
Q ss_pred CCCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHH
Q 000475 1214 WPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL 1293 (1470)
Q Consensus 1214 wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L 1293 (1470)
||..+.++++|++++|+....++++|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.+.+..++
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 89999999999999997543469999999999999999999999999999999999999999999999999998888889
Q ss_pred hcccEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHcc
Q 000475 1294 RSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1373 (1470)
Q Consensus 1294 R~~isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1373 (1470)
|++++|+||+|.+|++|+++|+..+..++++++.++++ +......||+|||||++||||+++
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999998765555555555543 234567899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecCh
Q 000475 1374 KKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSP 1438 (1470)
Q Consensus 1374 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p 1438 (1470)
+|++|+|||||++||+++.+.+.+.|++..+++|+|+++|+++.+..||+|++|++|++++.|+|
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999987778999999999999988999999999999999875
No 117
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-41 Score=382.91 Aligned_cols=226 Identities=38% Similarity=0.618 Sum_probs=209.7
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
|.|+++|++++|+.+ .++++|+||++++||++||+|+||||||||+++|.|+.+|.+|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 468999999999633 3599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEccCCCCCcccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000475 1298 SIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1376 (1470)
Q Consensus 1298 siIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1376 (1470)
+|+||+|.+|++|+++|+.... ...++++.++++.+++.+++..+|.|+++.++....+||+|||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999997543 345677888999999999999999999999888889999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000475 1377 ILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1377 ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
+|+|||||++||+.+.+.+.+.|++..+++|||+|+|+++.+..||+|++|++|++++.|++++++++
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 99999999999999999999999987678999999999999988999999999999999999888764
No 118
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-41 Score=382.49 Aligned_cols=233 Identities=36% Similarity=0.604 Sum_probs=213.9
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+.+ ..+|+|+||+|++||++||+|++|||||||+++|.|+.+|++|+|.+||.+++..+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 5789999999643 359999999999999999999999999999999999999999999999999999888889999999
Q ss_pred EccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 000475 1300 IPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRIL 1378 (1470)
Q Consensus 1300 IpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1378 (1470)
+||+|.+|++|+++|+... ...+++++.++++.+++.+.+..+|.|+++.+.....+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999753 345677788899999999999999999999998889999999999999999999999999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHH
Q 000475 1379 VLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVA 1454 (1470)
Q Consensus 1379 lLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~lv~ 1454 (1470)
+|||||++||+++...+.+.|++..++.|||+++|+++.+..||++++|++|++++.|+++++.++ .+.|+.++.
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~ 234 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWK 234 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHh
Confidence 999999999999999999999887668899999999999988999999999999999999998864 566665543
No 119
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=8.4e-42 Score=378.40 Aligned_cols=213 Identities=31% Similarity=0.526 Sum_probs=188.8
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.++++|++++|+. .++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.||.+++.+++.++++
T Consensus 2 ~L~~~~ls~~y~~--~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYGG--KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEECC--eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 4789999999973 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCC-CCcccHHHhcC----c----CCCCC--HH-HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000475 1299 IIPQDPM-LFQGTVRTNLD----P----LEQHS--DQ-EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1299 iIpQdp~-LF~gTIR~NLd----p----~~~~s--d~-eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
|+||++. -|.-||+|-+. | +...+ |+ .+.+||+.+++.++..+ .+ ..||||||||++
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r-------~~----~~LSGGerQrv~ 148 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR-------PV----DELSGGERQRVL 148 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC-------cc----cccChhHHHHHH
Confidence 9999975 45558888764 2 22222 33 47788999999887643 33 359999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhh-hhcCEEEEEeCCEEEEecChhHHhh
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTV-IDNDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti-~~~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
|||||.++|+||+|||||++||....-.|.+.+++.. ++.|||+|.|+++.. +.||++++|++|+++..|+|++.+.
T Consensus 149 iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 149 IARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred HHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 9999999999999999999999999999999999865 469999999999876 4599999999999999999999986
Q ss_pred c
Q 000475 1444 D 1444 (1470)
Q Consensus 1444 ~ 1444 (1470)
.
T Consensus 229 ~ 229 (258)
T COG1120 229 E 229 (258)
T ss_pred H
Confidence 4
No 120
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.6e-41 Score=399.96 Aligned_cols=219 Identities=26% Similarity=0.436 Sum_probs=191.8
Q ss_pred EEEEeEEEEeCCC--CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH---Hh
Q 000475 1220 IELENLLVQYNPT--LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---LR 1294 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~--~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR 1294 (1470)
|+++|++++|+.+ ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cccEEEccCCCCCc-ccHHHhcCc-C--CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000475 1295 SRLSIIPQDPMLFQ-GTVRTNLDP-L--EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1295 ~~isiIpQdp~LF~-gTIR~NLdp-~--~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
++|++|||++.+|. .|+++|+.. . ...+ ++++.++++.++|.+.....| ..||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----------SNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999995 699999962 2 1223 234678899998876544333 469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
|||||+.+|+||+||||||+||+.|...|.+.|++..+ +.|||+|||+++.+.. ||+|++|++|+++|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998653 7899999999999976 99999999999999999999987
Q ss_pred cCCChH
Q 000475 1444 DNSSSF 1449 (1470)
Q Consensus 1444 ~~~s~f 1449 (1470)
++...+
T Consensus 231 ~p~~~~ 236 (343)
T TIGR02314 231 HPKTPL 236 (343)
T ss_pred CCCcHH
Confidence 765544
No 121
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-41 Score=356.36 Aligned_cols=203 Identities=29% Similarity=0.394 Sum_probs=172.2
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE--------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------- 660 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------- 660 (1470)
.|+++|++.+|.. ...|++ |++|++||.++||||+||||||||++|.|+-+|++|++ .++|.
T Consensus 2 mi~i~~l~K~fg~--------~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I-~i~g~~~~~~~~~ 72 (240)
T COG1126 2 MIEIKNLSKSFGD--------KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSI-TVDGEDVGDKKDI 72 (240)
T ss_pred eEEEEeeeEEeCC--------eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceE-EECCEeccchhhH
Confidence 4789999999974 468999 99999999999999999999999999999999999996 88883
Q ss_pred ------eEEEcCCCCCCC-ccHHHHHhcCC----CCC----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 661 ------KAYVPQSSWIQT-GTIRENILFGK----DMR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 661 ------~ayv~Q~~~i~~-~Ti~eNI~~g~----~~~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
+|+|+|+..+|. .||.|||..+. ... +++-.+.++..+|.+..+.+ +..|||||
T Consensus 73 ~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----------P~qLSGGQ 141 (240)
T COG1126 73 LKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAY-----------PAQLSGGQ 141 (240)
T ss_pred HHHHHhcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhC-----------ccccCcHH
Confidence 589999988865 69999999873 122 23334456666666655544 46899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChh
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYE 804 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 804 (1470)
||||||||||..+|+++|+|||||||||+...++.+-.......|.|.|+|||++.|... ||||+.|++|+|+++|+++
T Consensus 142 qQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~ 221 (240)
T COG1126 142 QQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPE 221 (240)
T ss_pred HHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHH
Confidence 999999999999999999999999999999998876443444568999999999999987 9999999999999999999
Q ss_pred hHHhhchh
Q 000475 805 DLIADQNS 812 (1470)
Q Consensus 805 ~l~~~~~~ 812 (1470)
++..++..
T Consensus 222 ~~f~~p~~ 229 (240)
T COG1126 222 EFFDNPKS 229 (240)
T ss_pred HHhcCCCC
Confidence 99875443
No 122
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=5.2e-41 Score=380.75 Aligned_cols=232 Identities=34% Similarity=0.600 Sum_probs=210.4
Q ss_pred EEEEeEEEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1220 IELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
|+++|++++|+.. ..++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+....|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 5789999999653 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000475 1299 IIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRI 1377 (1470)
Q Consensus 1299 iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1377 (1470)
|+||+|.+|+.|+++|+... .....+++.+.++..++.+++..+|.|+++.......+||||||||++|||||+++|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999753 33456678888899999999999999999998888899999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHH
Q 000475 1378 LVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKL 1452 (1470)
Q Consensus 1378 LlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~l 1452 (1470)
|+|||||++||+.+.+.+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|+++++.+. .+..+.+
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~ 234 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KGVYAKL 234 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-ChhHHHH
Confidence 9999999999999999999999987678999999999999988999999999999999999998864 3444443
No 123
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-41 Score=363.04 Aligned_cols=226 Identities=28% Similarity=0.450 Sum_probs=190.8
Q ss_pred cEEEEeEEEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCC-HHHHhc
Q 000475 1219 KIELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG-LQDLRS 1295 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~--~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~-l~~LR~ 1295 (1470)
.++++|+++.|+.+. .++|+||||+|.+||.+||||+||||||||.++|.|+.+|++|+|.+||.+...-. .+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 478999999997643 15999999999999999999999999999999999999999999999998776543 335788
Q ss_pred ccEEEccCCCC-C--cccHHHhcC-cCCC----CCHHHHHHHHHHcCcHHHH-HhcccccCccccCCCCCCChhHHHHHH
Q 000475 1296 RLSIIPQDPML-F--QGTVRTNLD-PLEQ----HSDQEIWEVINKCHLAEIV-RQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1296 ~isiIpQdp~L-F--~gTIR~NLd-p~~~----~sd~eI~~aL~~~~L~~~v-~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
.+.+|+|||.- + .-||++-|. |... ...++++++|+.+||.+-. .+.| ..||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 99999999962 2 226666663 4332 2355699999999997644 3333 359999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCC--cEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSR--CTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~--~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
|||||.-+|++||||||||+||....+.|.+.+.+..++ -|.|+|||++..+.. ||||+||++|+++|.++..++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 999999999999999999999999999999999876654 499999999999987 99999999999999999999998
Q ss_pred cCCChHHHHHHH
Q 000475 1444 DNSSSFSKLVAE 1455 (1470)
Q Consensus 1444 ~~~s~f~~lv~~ 1455 (1470)
.+...|.+..-+
T Consensus 232 ~~~h~ytr~Ll~ 243 (252)
T COG1124 232 HPSHPYTRELLE 243 (252)
T ss_pred CCccHHHHHHHH
Confidence 766666655443
No 124
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=6.9e-41 Score=375.20 Aligned_cols=219 Identities=32% Similarity=0.531 Sum_probs=201.3
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
|.|+++|++++|+....++++|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999964334599999999999999999999999999999999999999999999999999888877889999
Q ss_pred EEEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000475 1298 SIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1376 (1470)
Q Consensus 1298 siIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1376 (1470)
+++||+|.+|..|+++|+... ...+.+++.++++..++.+.+...|.|+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 999999999989999999753 2345667888999999999999999999999988889999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEec
Q 000475 1377 ILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1377 ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g 1436 (1470)
+|||||||++||+++...+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999876668999999999988779999999999998764
No 125
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-41 Score=372.37 Aligned_cols=209 Identities=30% Similarity=0.458 Sum_probs=184.5
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|+.+ + ||+||||++++||.+||+||||||||||+++++|+++|++|+|.++|.+++.... |.+||
T Consensus 4 ~i~v~nl~v~y~~~-~-vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR-P-VLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE-e-eeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 58999999999865 4 9999999999999999999999999999999999999999999999998766432 57999
Q ss_pred EEccCC---CCCcccHHHhcCcCC-----------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1299 IIPQDP---MLFQGTVRTNLDPLE-----------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1299 iIpQdp---~LF~gTIR~NLdp~~-----------~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
||||.. .-|.-||+|-+.... ..+.+++.+||+++++.++. |.++++ |||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-------~r~i~~----LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-------DRQIGE----LSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-------CCcccc----cCcHHHHH
Confidence 999965 457889999886421 12347899999999999875 456654 99999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS-RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~-~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
+.|||||+++|++|+|||||++||+.++..|.+.|++..+ ||||++|+|+++.+++ ||+|+.|+ +++...|+|++.+
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~ 226 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVL 226 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhcc
Confidence 9999999999999999999999999999999999998764 8999999999999977 99999887 5689999999998
Q ss_pred hc
Q 000475 1443 ED 1444 (1470)
Q Consensus 1443 ~~ 1444 (1470)
+.
T Consensus 227 ~~ 228 (254)
T COG1121 227 TE 228 (254)
T ss_pred CH
Confidence 64
No 126
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.2e-40 Score=355.00 Aligned_cols=221 Identities=31% Similarity=0.504 Sum_probs=193.4
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHH---HHh
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ---DLR 1294 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR 1294 (1470)
-.|++++|+++|.. ..|++||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.||..++-. .+|
T Consensus 7 ~~I~vr~v~~~fG~--~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 7 PLIEVRGVTKSFGD--RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred ceEEEeeeeeecCC--EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 46999999999964 3699999999999999999999999999999999999999999999999999999864 469
Q ss_pred cccEEEccCCCCCcc-cHHHhcC-cCCCC---CHHHHH----HHHHHcCcHHHHH-hcccccCccccCCCCCCChhHHHH
Q 000475 1295 SRLSIIPQDPMLFQG-TVRTNLD-PLEQH---SDQEIW----EVINKCHLAEIVR-QDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1295 ~~isiIpQdp~LF~g-TIR~NLd-p~~~~---sd~eI~----~aL~~~~L~~~v~-~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
+++|++.|...||+. ||+||+. |..+| +++++. .-|+.|||..-+. ..| +.||||.|.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHHH
Confidence 999999999999987 9999997 55444 455543 4577788876632 233 4699999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1441 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~L 1441 (1470)
++||||+.-+|+||++|||||++||-+...+-+.|++.. -+.|+++|||+++++.. ||||+++.+|+|+-.|+|+++
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999988888654 37899999999999987 899999999999999999999
Q ss_pred hhcCCChHHH
Q 000475 1442 LEDNSSSFSK 1451 (1470)
Q Consensus 1442 l~~~~s~f~~ 1451 (1470)
.+.++...++
T Consensus 234 ~~sd~P~v~q 243 (263)
T COG1127 234 LASDDPWVRQ 243 (263)
T ss_pred HhCCCHHHHH
Confidence 9876655444
No 127
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=7.9e-41 Score=376.49 Aligned_cols=211 Identities=31% Similarity=0.494 Sum_probs=185.1
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCC-----CCCCcEEEEcCEeCCCCC--HHH
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV-----EPSGGRILIDGVDISMIG--LQD 1292 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~-----~p~~G~I~IDG~dI~~i~--l~~ 1292 (1470)
|+++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.+||.++.+.+ ...
T Consensus 1 i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGDK--HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 5789999999643 5999999999999999999999999999999999999 999999999999998876 567
Q ss_pred HhcccEEEccCCCCCcccHHHhcCcCC---C-C----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1293 LRSRLSIIPQDPMLFQGTVRTNLDPLE---Q-H----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1293 LR~~isiIpQdp~LF~gTIR~NLdp~~---~-~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
+|++++|+||+|.+|..|+++|+.... . . .++++.++++.+++.+.....++ +.+||||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~qr 149 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQR 149 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHHH
Confidence 889999999999999889999996421 1 1 13457788888888665443221 45799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1441 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~L 1441 (1470)
++|||||+++|++|+|||||++||+++...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+|+++
T Consensus 150 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 150 LCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999999999999999999999999999987656899999999999875 999999999999999998764
No 128
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=391.39 Aligned_cols=218 Identities=27% Similarity=0.407 Sum_probs=184.6
Q ss_pred CCcEEEEeEEEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCC-----
Q 000475 1217 SGKIELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI----- 1288 (1470)
Q Consensus 1217 ~g~I~~~nvs~~Y~~~~---~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----- 1288 (1470)
...|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.
T Consensus 19 ~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~ 98 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHE 98 (320)
T ss_pred CceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccc
Confidence 34599999999997432 3599999999999999999999999999999999999999999999999998753
Q ss_pred -----------CHHHHhcccEEEccCC--CCCcccHHHhcCcCC---CCCHHH----HHHHHHHcCcHHHHHhcccccCc
Q 000475 1289 -----------GLQDLRSRLSIIPQDP--MLFQGTVRTNLDPLE---QHSDQE----IWEVINKCHLAEIVRQDQRLLDA 1348 (1470)
Q Consensus 1289 -----------~l~~LR~~isiIpQdp--~LF~gTIR~NLdp~~---~~sd~e----I~~aL~~~~L~~~v~~lp~gLdt 1348 (1470)
....+|++++|+||+| .+|++|+++|+.... ..++++ +.++++.+++.+ .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~ 168 (320)
T PRK13631 99 LITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD----------S 168 (320)
T ss_pred ccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh----------h
Confidence 3567899999999998 689999999996421 223333 333444444421 2
Q ss_pred cccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh-hcCEEEE
Q 000475 1349 PVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI-DNDLVLV 1426 (1470)
Q Consensus 1349 ~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~-~~DrIlv 1426 (1470)
.....+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|++.. +++|||+|||+++.+. .||||++
T Consensus 169 ~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~v 248 (320)
T PRK13631 169 YLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIV 248 (320)
T ss_pred HhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEE
Confidence 3445567899999999999999999999999999999999999999999998753 5799999999999885 5999999
Q ss_pred EeCCEEEEecChhHHhhc
Q 000475 1427 LDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1427 L~~G~vvE~g~p~~Ll~~ 1444 (1470)
|++|++++.|+|++++++
T Consensus 249 l~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 249 MDKGKILKTGTPYEIFTD 266 (320)
T ss_pred EECCEEEEeCCHHHHhcC
Confidence 999999999999998764
No 129
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2e-39 Score=410.86 Aligned_cols=199 Identities=25% Similarity=0.322 Sum_probs=168.1
Q ss_pred CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEEcCEeCCCCCHHHHhcccEEEccCCC-CCc
Q 000475 1232 TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE--PSGGRILIDGVDISMIGLQDLRSRLSIIPQDPM-LFQ 1308 (1470)
Q Consensus 1232 ~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~--p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~-LF~ 1308 (1470)
+....|+|||=-++||--+|++|.||||||||++.|.+-.+ ..+|+|+|||.+..+ +..++++|||-|++. +=.
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 34468999999999999999999999999999999998764 247999999998765 678999999999875 445
Q ss_pred ccHHHhcCc------CCCCCHHH----HHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCC-CE
Q 000475 1309 GTVRTNLDP------LEQHSDQE----IWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK-RI 1377 (1470)
Q Consensus 1309 gTIR~NLdp------~~~~sd~e----I~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~-~I 1377 (1470)
-||||-|.. -.+.+++| +.++++..+|.++- |..||..|+.||+.||.||.||--|+.|| .|
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-------daiVG~~G~GLs~eQRKrLTIgVELvA~P~~i 951 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-------DALVGLPGSGLSTEQRKRLTIGVELVANPSSI 951 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-------hhhccCCCCCCCHHHhceeeEEEEEecCCcee
Confidence 599999852 13445544 45666666666543 66799999999999999999999999999 89
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhh--hhcCEEEEEeC-CEEEEecChhH
Q 000475 1378 LVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTV--IDNDLVLVLDE-GKVLEYDSPRQ 1440 (1470)
Q Consensus 1378 LlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti--~~~DrIlvL~~-G~vvE~g~p~~ 1440 (1470)
|+||||||+||+++...|.+++|+.. .|+||++.-|.++.. +..|+++.|++ |+.|-+|++.+
T Consensus 952 lFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 952 LFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 99999999999999999999999854 789999999999864 56999999975 79999988643
No 130
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-40 Score=375.78 Aligned_cols=212 Identities=31% Similarity=0.443 Sum_probs=184.6
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCH---HHHhcc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL---QDLRSR 1296 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l---~~LR~~ 1296 (1470)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 578999999963 359999999999999999999999999999999999999999999999999988764 567899
Q ss_pred cEEEccCCCCCcc-cHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHH
Q 000475 1297 LSIIPQDPMLFQG-TVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCL 1367 (1470)
Q Consensus 1297 isiIpQdp~LF~g-TIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1367 (1470)
++|+||+|.+|.+ |+++|+... ...+ ++++.++++.+++.++.. ..+ .+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~----~~LSgG~~qrv~i 147 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAED-------LYP----AELSGGMKKRVAL 147 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhc-------CCh----hhCCHHHHHHHHH
Confidence 9999999999986 999999632 1123 234667788877755432 222 4699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1368 ARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1368 ARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
||||+++|+||+|||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 148 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 148 ARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999999998643 7899999999999876 999999999999999999998754
No 131
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-40 Score=369.67 Aligned_cols=215 Identities=32% Similarity=0.488 Sum_probs=194.9
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCC-CCCHHHHhccc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDIS-MIGLQDLRSRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~-~i~l~~LR~~i 1297 (1470)
.|+++|++++|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 58899999999877 77999999999999999999999999999999999999999999999999998 48899999999
Q ss_pred EEEccCC--CCCcccHHHhcCcCC---CCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1298 SIIPQDP--MLFQGTVRTNLDPLE---QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1298 siIpQdp--~LF~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
|+|.|+| .+|..||.+.+.... ..+. +.+.++|+.+++.++....| .+||||||||++||
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaIA 150 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAIA 150 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHhh
Confidence 9999999 799999999997532 2344 34778899999987743333 57999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1445 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~ 1445 (1470)
.+|..+|+|||||||||+||+...+.+.+.+++..+ +.|+|+|+|+++.+.. |||++||++|+++.+|+|++++++.
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~~ 230 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFNDA 230 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhhh
Confidence 999999999999999999999999999999998754 4799999999999988 9999999999999999999999764
No 132
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-40 Score=375.10 Aligned_cols=219 Identities=24% Similarity=0.415 Sum_probs=192.9
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC---CCCcEEEEcCEeCCCCCHHHHhc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE---PSGGRILIDGVDISMIGLQDLRS 1295 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~---p~~G~I~IDG~dI~~i~l~~LR~ 1295 (1470)
.|+++|++++|+. +++|+|+||++++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+....|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 3789999999963 469999999999999999999999999999999999985 68999999999999888888899
Q ss_pred ccEEEccCCCCCcccHHHhcCcCC---C------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000475 1296 RLSIIPQDPMLFQGTVRTNLDPLE---Q------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1296 ~isiIpQdp~LF~gTIR~NLdp~~---~------~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
+++|+||+|.+|..|+++|+.... . ..++++.++++.+++.+++..+ ....+.+||+|||||++
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDK-------LKQNALALSGGQQQRLC 152 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHH-------hcCCcccCCHHHHHHHH
Confidence 999999999999999999996421 1 1234577888998886655432 23345689999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1445 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~ 1445 (1470)
|||||+++|++|+|||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 232 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENP 232 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999999999987678999999999998865 9999999999999999999998654
Q ss_pred C
Q 000475 1446 S 1446 (1470)
Q Consensus 1446 ~ 1446 (1470)
.
T Consensus 233 ~ 233 (246)
T PRK14269 233 K 233 (246)
T ss_pred C
Confidence 3
No 133
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-40 Score=372.44 Aligned_cols=221 Identities=31% Similarity=0.509 Sum_probs=192.9
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..++|++++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999963 35999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEccCCCCCcccHHHhcCcCC---CCCHHHHHHHHHHcCcH-HHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccC
Q 000475 1299 IIPQDPMLFQGTVRTNLDPLE---QHSDQEIWEVINKCHLA-EIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKK 1374 (1470)
Q Consensus 1299 iIpQdp~LF~gTIR~NLdp~~---~~sd~eI~~aL~~~~L~-~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~ 1374 (1470)
|+||+|.+|+.|+++|+.... ...++++.+.++..++. +... .....||||||||++||||++++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYAT-----------RDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhh-----------CCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999997422 22345677788887774 2221 23457999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHHH
Q 000475 1375 KRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFSK 1451 (1470)
Q Consensus 1375 ~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~ 1451 (1470)
|++|+|||||++||+++...+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+|.+++.++...+.+
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 99999999999999999999999998764 37899999999999876 9999999999999999999998765545544
Q ss_pred H
Q 000475 1452 L 1452 (1470)
Q Consensus 1452 l 1452 (1470)
.
T Consensus 230 ~ 230 (241)
T PRK14250 230 L 230 (241)
T ss_pred H
Confidence 3
No 134
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-40 Score=379.53 Aligned_cols=216 Identities=27% Similarity=0.455 Sum_probs=196.7
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++||+.+|.+.. +++|+|++|+.||.++++||||||||||+++|.|+.+|++|+|.|||.|++++++.+ ++|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 589999999997543 999999999999999999999999999999999999999999999999999988876 8999
Q ss_pred EEccCCCCCcc-cHHHhcCc-CC------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1299 IIPQDPMLFQG-TVRTNLDP-LE------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp-~~------~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
+|+|+..||+. ||++|+.. .. +--++++.++++..++.+...+.|. .||||||||++||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHHHH
Confidence 99999999988 99999974 22 1236678899999999999888774 589999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSS 1447 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s 1447 (1470)
|.++|++++||||.|+||......+...|++..+ +.|+|.|||+....+. +|||.||++|+|.+.|+|.|+.+++..
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n 227 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPAN 227 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccc
Confidence 9999999999999999999999998888877543 5899999999998876 999999999999999999999999887
Q ss_pred hH
Q 000475 1448 SF 1449 (1470)
Q Consensus 1448 ~f 1449 (1470)
.|
T Consensus 228 ~f 229 (338)
T COG3839 228 LF 229 (338)
T ss_pred hh
Confidence 77
No 135
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-40 Score=381.03 Aligned_cols=215 Identities=26% Similarity=0.417 Sum_probs=190.9
Q ss_pred cEEEEeEEEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1219 KIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
.|+++|++++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999643 24599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEccCC--CCCcccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1298 SIIPQDP--MLFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1298 siIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
+|+||+| .++..|+++|+.... ..+ ++++.++++.+++.++....| .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 356779999997421 122 345788999999877654433 47999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||||++|++|++++.|+++++.++
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999988643 7999999999999978999999999999999999998764
No 136
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=5.4e-40 Score=369.48 Aligned_cols=217 Identities=32% Similarity=0.522 Sum_probs=197.7
Q ss_pred CCCcEEEEeEEEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHh
Q 000475 1216 SSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLR 1294 (1470)
Q Consensus 1216 ~~g~I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR 1294 (1470)
..|.++++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+....|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 35789999999999643 23699999999999999999999999999999999999999999999999999888777888
Q ss_pred cccEEEccCCCCCcccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHcc
Q 000475 1295 SRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1373 (1470)
Q Consensus 1295 ~~isiIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1373 (1470)
++++|+||+|.+|++|+++|++.. .....+++++..+..++.+++..+|.|+++.+.....+||||||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999843 3344556677777788899999998889988888899999999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEE
Q 000475 1374 KKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKV 1432 (1470)
Q Consensus 1374 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~v 1432 (1470)
+|++|+|||||++||+++.+.+.+.|++..+++|+|+|+|+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999987777999999999999988999999999974
No 137
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-40 Score=350.75 Aligned_cols=213 Identities=26% Similarity=0.418 Sum_probs=190.2
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCC---HHHHhc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG---LQDLRS 1295 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~---l~~LR~ 1295 (1470)
.|+++||+.+|+. ...+|+||||+|++||.|+|+|+||||||||+++|.|+++|++|+|.++|.++.... ++++|+
T Consensus 3 ~i~~~nl~k~yp~-~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPG-GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCC-CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 4899999999974 456999999999999999999999999999999999999999999999999999988 677889
Q ss_pred ccEEEccCCCCCcc-cHHHhcCc------------CCCCCHH---HHHHHHHHcCcHHHHHhcccccCccccCCCCCCCh
Q 000475 1296 RLSIIPQDPMLFQG-TVRTNLDP------------LEQHSDQ---EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSV 1359 (1470)
Q Consensus 1296 ~isiIpQdp~LF~g-TIR~NLdp------------~~~~sd~---eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSg 1359 (1470)
++|+|.|.+-|-.- |+-+|+.- ++-++.+ ...++|+++|+.++.-.. -++|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qr-----------a~~LSG 150 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQR-----------ASTLSG 150 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHH-----------hccCCc
Confidence 99999999988765 89999731 2344443 477899999998876543 247999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1360 GQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1360 GQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
||+||++|||||.++|+|++=|||||+||+.+.+.|++.|++.. .|.|||+.-|.++..+. ||||+-|++|+|+-.|
T Consensus 151 GQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg 230 (258)
T COG3638 151 GQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDG 230 (258)
T ss_pred chhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeC
Confidence 99999999999999999999999999999999999999999754 57999999999999876 9999999999999999
Q ss_pred ChhHHhh
Q 000475 1437 SPRQLLE 1443 (1470)
Q Consensus 1437 ~p~~Ll~ 1443 (1470)
++.||-+
T Consensus 231 ~~~el~~ 237 (258)
T COG3638 231 PASELTD 237 (258)
T ss_pred ChhhhhH
Confidence 9999643
No 138
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-40 Score=389.66 Aligned_cols=221 Identities=26% Similarity=0.437 Sum_probs=190.1
Q ss_pred EEEEeEEEEeCC--CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH---Hh
Q 000475 1220 IELENLLVQYNP--TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---LR 1294 (1470)
Q Consensus 1220 I~~~nvs~~Y~~--~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR 1294 (1470)
|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 2346999999999999999999999999999999999999999999999999999887654 47
Q ss_pred cccEEEccCCCCCc-ccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000475 1295 SRLSIIPQDPMLFQ-GTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1295 ~~isiIpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
++++|+||+|.+|. .|+++|+... ...+ ++++.++++..++.++... . ..+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-------~----~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADR-------Y----PAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhC-------C----hhhCCHHHHHHHH
Confidence 89999999999886 6999999632 1222 2356677787777654432 2 3469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
|||||+++|+||+|||||++||+.+...+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998643 7899999999999876 99999999999999999999987
Q ss_pred cCCChHHH
Q 000475 1444 DNSSSFSK 1451 (1470)
Q Consensus 1444 ~~~s~f~~ 1451 (1470)
++...+.+
T Consensus 231 ~~~~~~~~ 238 (343)
T PRK11153 231 HPKHPLTR 238 (343)
T ss_pred CCCcHHHH
Confidence 65544433
No 139
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-40 Score=388.12 Aligned_cols=217 Identities=22% Similarity=0.368 Sum_probs=191.8
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|+.+ ..+|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++.+++.+ +++++
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 48999999999433 3599999999999999999999999999999999999999999999999999987764 47899
Q ss_pred EEccCCCCCcc-cHHHhcCcC-C--CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1299 IIPQDPMLFQG-TVRTNLDPL-E--QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp~-~--~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
|+||++.+|.. |+++|+... . ..+ ++++.++++.+++.++..+.| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalARA 148 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGRA 148 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999965 999999732 1 223 345778899999987766554 3699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSS 1447 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s 1447 (1470)
|+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++++++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (356)
T PRK11650 149 IVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPAS 228 (356)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCcc
Confidence 9999999999999999999999999999987643 7899999999998865 999999999999999999999988766
Q ss_pred hH
Q 000475 1448 SF 1449 (1470)
Q Consensus 1448 ~f 1449 (1470)
.|
T Consensus 229 ~~ 230 (356)
T PRK11650 229 TF 230 (356)
T ss_pred HH
Confidence 55
No 140
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=6.8e-40 Score=367.15 Aligned_cols=210 Identities=24% Similarity=0.357 Sum_probs=183.2
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++||+++|+.+..++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++... ..++|+++++
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEEE
Confidence 578999999965324699999999999999999999999999999999999999999999999999764 3667889999
Q ss_pred EccCCCCC-cccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLF-QGTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF-~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||+|.+| ..|+++|+... ...+ ++++.++++..++.+.. ++.+ .+||+|||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-------NKRA----RTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-------hChh----hhCCHHHHHHHHHHHHH
Confidence 99999988 57999998632 1122 24567788888876543 3333 46999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1441 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~L 1441 (1470)
+++|++|+|||||++||+.+.+.+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999987777999999999999876 999999999999999998875
No 141
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=372.86 Aligned_cols=222 Identities=24% Similarity=0.346 Sum_probs=191.8
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCC--CCHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISM--IGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~l~ 1291 (1470)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. ....
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 7 IIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred eEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 6999999999964 3599999999999999999999999999999999999997 48999999999864 3455
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcCC----CC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPLE----QH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~~----~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
.+|++++|+||+|.+|..|+++|+.... .. .++.+.++++.+++.+.+ ++.+|+. ..+|||||||
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~----~~~LSgG~~q 157 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNTN----ALSLSGGQQQ 157 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhCC----cccCCHHHHH
Confidence 6889999999999999999999996321 11 234577788888875443 2344554 4679999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||||++|++|++++.|+++++.
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 158 RLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988777999999999999865 9999999999999999999998
Q ss_pred hcCCChH
Q 000475 1443 EDNSSSF 1449 (1470)
Q Consensus 1443 ~~~~s~f 1449 (1470)
+++.-.|
T Consensus 238 ~~~~~~~ 244 (254)
T PRK14273 238 FNPKNTK 244 (254)
T ss_pred hCCCChH
Confidence 7665444
No 142
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-40 Score=377.13 Aligned_cols=212 Identities=27% Similarity=0.412 Sum_probs=187.8
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999643 45999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEccCC--CCCcccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1299 IIPQDP--MLFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1299 iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
|+||+| .+|..|+++|+.... ..+ ++++.++++.+++.+...+.| ..||||||||++|||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~lar 151 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIAG 151 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999998 678899999997421 122 345788899999876654443 369999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
||+++|++|+|||||++||+.+...+.+.|++.. +++|||+++|+++.+.. ||||++|++|++++.|+++++.
T Consensus 152 aL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 152 VLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999999999998764 47999999999999865 9999999999999999987643
No 143
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-40 Score=379.81 Aligned_cols=214 Identities=32% Similarity=0.502 Sum_probs=185.4
Q ss_pred EEEEeEEEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCC--HHHHh
Q 000475 1220 IELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG--LQDLR 1294 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~---~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~--l~~LR 1294 (1470)
|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999996532 36999999999999999999999999999999999999999999999999998743 46789
Q ss_pred cccEEEccCC--CCCcccHHHhcCcCC---CCCH----HHHHHHHHHcCcH--HHHHhcccccCccccCCCCCCChhHHH
Q 000475 1295 SRLSIIPQDP--MLFQGTVRTNLDPLE---QHSD----QEIWEVINKCHLA--EIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1295 ~~isiIpQdp--~LF~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~--~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
++++|+||+| .+|+.|+++|+.... ..++ +++.++++.++|. +. .| .....|||||||
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-------~~----~~~~~LSgGq~q 151 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDY-------KD----KSPFELSGGQKR 151 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhh-------cc----CCcccCCHHHHH
Confidence 9999999998 578899999996321 2333 3467788888774 22 22 234579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1440 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~ 1440 (1470)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|++++
T Consensus 152 rv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 152 RVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998643 7899999999999865 99999999999999999999
Q ss_pred Hhhc
Q 000475 1441 LLED 1444 (1470)
Q Consensus 1441 Ll~~ 1444 (1470)
++++
T Consensus 232 ~~~~ 235 (287)
T PRK13637 232 VFKE 235 (287)
T ss_pred HHhC
Confidence 8753
No 144
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=372.58 Aligned_cols=224 Identities=26% Similarity=0.413 Sum_probs=192.7
Q ss_pred CCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEEcCEeCCC--CC
Q 000475 1217 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IG 1289 (1470)
Q Consensus 1217 ~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~ 1289 (1470)
.+.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 467999999999964 359999999999999999999999999999999999986 589999999999864 45
Q ss_pred HHHHhcccEEEccCCCCCcccHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000475 1290 LQDLRSRLSIIPQDPMLFQGTVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1361 (1470)
Q Consensus 1290 l~~LR~~isiIpQdp~LF~gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQ 1361 (1470)
...+|++++|+||+|.+|..|+++|+... ...+ +++++++++.+++.+.+.. .......+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKD-------KLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHH-------HHhcCCCCCCHHH
Confidence 66789999999999999999999999642 1222 3457788888887544322 2234456799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000475 1362 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1440 (1470)
Q Consensus 1362 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~ 1440 (1470)
|||++|||||+++|+||+|||||++||+.+.+.+.+.|++..++.|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 241 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDT 241 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987677899999999999865 99999999999999999999
Q ss_pred HhhcCCChH
Q 000475 1441 LLEDNSSSF 1449 (1470)
Q Consensus 1441 Ll~~~~s~f 1449 (1470)
+.+.+.-.+
T Consensus 242 ~~~~~~~~~ 250 (260)
T PRK10744 242 IFTKPAKKQ 250 (260)
T ss_pred HHhCCCcHH
Confidence 987554333
No 145
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=385.65 Aligned_cols=217 Identities=25% Similarity=0.437 Sum_probs=192.0
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
..|+++|++++|.. ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++...+.+ |+++
T Consensus 5 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred cEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 36999999999963 4599999999999999999999999999999999999999999999999999887643 6889
Q ss_pred EEEccCCCCCcc-cHHHhcCcC-C--CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPL-E--QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~-~--~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
+++||++.+|.. |+++|+... . ..+ ++++.++++.+++.++..+.| ..||||||||++|||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----------~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV-----------DQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999976 999999732 1 122 356778888988876654333 469999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNS 1446 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~ 1446 (1470)
||+++|++|+||||||+||+.+...+++.|++..+ ++|+|+|||+.+.+.. ||||+||++|++++.|+|+++.+++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999988654 7999999999999866 99999999999999999999998887
Q ss_pred ChH
Q 000475 1447 SSF 1449 (1470)
Q Consensus 1447 s~f 1449 (1470)
..|
T Consensus 230 ~~~ 232 (351)
T PRK11432 230 SRF 232 (351)
T ss_pred chH
Confidence 655
No 146
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.7e-39 Score=353.31 Aligned_cols=203 Identities=29% Similarity=0.435 Sum_probs=175.8
Q ss_pred EEEEeEEEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH---H-
Q 000475 1220 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---L- 1293 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~--~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---L- 1293 (1470)
++++||+..|..+. ..+|+|+||+|++||.|+|+||||||||||+++|-++-.|++|+|.++|.|+..++-++ +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996543 36999999999999999999999999999999999999999999999999999998543 3
Q ss_pred hcccEEEccCCCCCcc-cHHHhcC-c--CCCCC----HHHHHHHHHHcCcHHHHH-hcccccCccccCCCCCCChhHHHH
Q 000475 1294 RSRLSIIPQDPMLFQG-TVRTNLD-P--LEQHS----DQEIWEVINKCHLAEIVR-QDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1294 R~~isiIpQdp~LF~g-TIR~NLd-p--~~~~s----d~eI~~aL~~~~L~~~v~-~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
|++||+|+|+..|++. |++||+. | +.... ++.+.+.++.+||.+... ..| ..||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p-----------~eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP-----------SELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc-----------hhcCHHHHHH
Confidence 5679999999988876 9999987 2 22222 445666777778876544 323 4699999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeCCEEE
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDEGKVL 1433 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~~DrIlvL~~G~vv 1433 (1470)
+||||||+.+|+|++.||||.+||.+|.+.|.+.+++.. .++|||+|||+......|||++.|.+|++.
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 999999999999999999999999999999999999874 478999999999999999999999999944
No 147
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=371.85 Aligned_cols=219 Identities=26% Similarity=0.412 Sum_probs=189.7
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEEcCEeCCC--CCHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1291 (1470)
.|+++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. ....
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 359999999999999999999999999999999999975 589999999999975 3456
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcC----CC----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPL----EQ----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~----~~----~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
.+|++++|+||++.+|.+|+++|+... +. ..++++.++++.+++.+.+.. .......+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~q 156 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQQ 156 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHHH
Confidence 788999999999999999999999632 11 123567788888888654432 123345679999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|++|||||+++|+||+|||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999865 9999999999999999999998
Q ss_pred hcCC
Q 000475 1443 EDNS 1446 (1470)
Q Consensus 1443 ~~~~ 1446 (1470)
+++.
T Consensus 237 ~~~~ 240 (253)
T PRK14242 237 TRPR 240 (253)
T ss_pred cCCC
Confidence 7654
No 148
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.8e-40 Score=337.85 Aligned_cols=207 Identities=27% Similarity=0.431 Sum_probs=187.5
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH---Hhcc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---LRSR 1296 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR~~ 1296 (1470)
|+|+||+.+|+.+ +++|+||||+|++||.+=++|+|||||||++++|++...|++|+|.++|.|++++.-++ ||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 7999999999877 77999999999999999999999999999999999999999999999999999998665 8999
Q ss_pred cEEEccCCCCCcc-cHHHhcC-cCC--CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1297 LSIIPQDPMLFQG-TVRTNLD-PLE--QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1297 isiIpQdp~LF~g-TIR~NLd-p~~--~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
||+|.||--|... |+.||+. |.. ..+ .+++.++|+.+||.+....+|. .|||||+||+|||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaIA 149 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAIA 149 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHHH
Confidence 9999999987755 9999986 332 222 3457889999999999988884 5899999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSP 1438 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p 1438 (1470)
||+..+|++|+-||||-+||+++...|.+.+.+.. .|.||++.||+.+.+.+ --|++.+++|+++..+.+
T Consensus 150 RAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 150 RAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 99999999999999999999999999999998764 68999999999999987 568999999999988764
No 149
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-39 Score=370.74 Aligned_cols=212 Identities=28% Similarity=0.452 Sum_probs=183.7
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCC---HHHHhcc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG---LQDLRSR 1296 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~---l~~LR~~ 1296 (1470)
++++|++++|+.+ ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999642 45999999999999999999999999999999999999999999999999998876 4568899
Q ss_pred cEEEccCCCCCc-ccHHHhcCcC------------C---CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChh
Q 000475 1297 LSIIPQDPMLFQ-GTVRTNLDPL------------E---QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVG 1360 (1470)
Q Consensus 1297 isiIpQdp~LF~-gTIR~NLdp~------------~---~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgG 1360 (1470)
++++||++.+|. .|+++|+... + ...++++.++++.+++.+.. + ..+.+||||
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~LS~G 148 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKA-------Y----QRADQLSGG 148 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhh-------C----CCcccCCHH
Confidence 999999998887 5999999531 1 11234566777777775432 2 234579999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecC
Q 000475 1361 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDS 1437 (1470)
Q Consensus 1361 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~ 1437 (1470)
||||++|||||+++|+||+|||||++||+.+...+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|++++.|+
T Consensus 149 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 228 (241)
T cd03256 149 QQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGP 228 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999999999999999999999864 37999999999999985 99999999999999999
Q ss_pred hhHHhh
Q 000475 1438 PRQLLE 1443 (1470)
Q Consensus 1438 p~~Ll~ 1443 (1470)
++++.+
T Consensus 229 ~~~~~~ 234 (241)
T cd03256 229 PAELTD 234 (241)
T ss_pred HHHhhH
Confidence 998743
No 150
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=376.57 Aligned_cols=215 Identities=25% Similarity=0.424 Sum_probs=191.4
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.++++||+++|+...+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999654456999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEccCC--CCCcccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1299 IIPQDP--MLFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1299 iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
|+||+| .+++.|+++|+.... ..+ ++++.++++.++|.++....| ..||||||||++|||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~lar 153 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIAG 153 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 567789999996421 123 244778888888887765544 369999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
||+++|+||+|||||++||+.+...+.+.|++..+ ++|||+++|+++.+..||+|++|++|++++.|+++++.+.
T Consensus 154 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 154 VLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998653 7899999999999988999999999999999999988753
No 151
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.7e-39 Score=359.57 Aligned_cols=199 Identities=27% Similarity=0.409 Sum_probs=182.9
Q ss_pred EEEEeEEEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcc
Q 000475 1220 IELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSR 1296 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~---~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~ 1296 (1470)
|+++||+++|++.. +++|+|+||+|++||+++|+|++|||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57999999997542 3699999999999999999999999999999999999999999999999 6
Q ss_pred cEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000475 1297 LSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1376 (1470)
Q Consensus 1297 isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1376 (1470)
++|+||+|.+|++|+++|+......++++.+++++.+++.+++...|.|+++.+.+.+.+||+|||||++|||||+++|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998765566777889999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHH-HHHHhc-CCcEEEEEecChhhhhhcCEEEEEeCCE
Q 000475 1377 ILVLDEATASIDTATDNVIQQ-TIREET-SRCTVITVAHRIPTVIDNDLVLVLDEGK 1431 (1470)
Q Consensus 1377 ILlLDEaTsslD~~Td~~Iq~-~I~~~~-~~~TVI~IAHRl~ti~~~DrIlvL~~G~ 1431 (1470)
+++|||||++||+++.+.+.+ .+++.. ++.|||++||+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999887766 566553 4689999999999998899999999985
No 152
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-39 Score=368.03 Aligned_cols=212 Identities=24% Similarity=0.401 Sum_probs=183.1
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 78 (239)
T cd03296 3 IEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGF 78 (239)
T ss_pred EEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEE
Confidence 789999999964 459999999999999999999999999999999999999999999999999876543 3678999
Q ss_pred EccCCCCCc-ccHHHhcCcCC---CC----C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHH
Q 000475 1300 IPQDPMLFQ-GTVRTNLDPLE---QH----S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCL 1367 (1470)
Q Consensus 1300 IpQdp~LF~-gTIR~NLdp~~---~~----s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1367 (1470)
+||+|.+|. .|+++|+.... .. + ++++.++++.+++.+..... ..+||+|||||++|
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~l 147 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRY-----------PAQLSGGQRQRVAL 147 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcC-----------hhhCCHHHHHHHHH
Confidence 999999886 59999997421 11 1 23456778888776544332 24699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1368 ARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1368 ARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
||||+++|++|+|||||++||+++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 148 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 9999999999999999999999999999999988643 7899999999998765 999999999999999999999865
Q ss_pred CC
Q 000475 1445 NS 1446 (1470)
Q Consensus 1445 ~~ 1446 (1470)
+.
T Consensus 228 ~~ 229 (239)
T cd03296 228 PA 229 (239)
T ss_pred CC
Confidence 43
No 153
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=8.3e-40 Score=365.36 Aligned_cols=202 Identities=24% Similarity=0.353 Sum_probs=176.4
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHH---HHhcc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ---DLRSR 1296 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR~~ 1296 (1470)
|+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 689999999965434699999999999999999999999999999999999999999999999999876543 47889
Q ss_pred cEEEccCCCCCcc-cHHHhcCcC---CC----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1297 LSIIPQDPMLFQG-TVRTNLDPL---EQ----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1297 isiIpQdp~LF~g-TIR~NLdp~---~~----~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
++|+||+|.+|.. |+++|+... .. ..++++.++++.+++.+.....| .+||||||||++||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~la 150 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAIA 150 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 9999999998874 999999631 11 12456788899998876654433 36999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEE
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKV 1432 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~v 1432 (1470)
|||+++|+||+|||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999998763 47899999999999976 999999999985
No 154
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.1e-39 Score=369.48 Aligned_cols=221 Identities=29% Similarity=0.461 Sum_probs=190.4
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCC-----CcEEEEcCEeCCCC--CHHH
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS-----GGRILIDGVDISMI--GLQD 1292 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~-----~G~I~IDG~dI~~i--~l~~ 1292 (1470)
|+++|++++|+.. .+++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... ....
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGEK--EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECCe--eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 7899999999642 5999999999999999999999999999999999999998 99999999999763 4556
Q ss_pred HhcccEEEccCCCCCcccHHHhcCcC---CC-CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1293 LRSRLSIIPQDPMLFQGTVRTNLDPL---EQ-HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1293 LR~~isiIpQdp~LF~gTIR~NLdp~---~~-~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
.|++++|+||++.+|..|+++|+... .. .+ ++++.++++..++.+.+.. .++. ...+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~~----~~~~LSgG~~qr 152 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKD---RLHD----SALGLSGGQQQR 152 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhh---HhhC----CcccCCHHHHHH
Confidence 78999999999999999999999631 11 12 3457778888888644321 1232 345799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
++|||||+++|++++|||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|+++++++
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667999999999999866 99999999999999999999987
Q ss_pred cCCChH
Q 000475 1444 DNSSSF 1449 (1470)
Q Consensus 1444 ~~~s~f 1449 (1470)
++...+
T Consensus 233 ~~~~~~ 238 (247)
T TIGR00972 233 NPKEKR 238 (247)
T ss_pred CCCChH
Confidence 655544
No 155
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=7.1e-39 Score=369.14 Aligned_cols=218 Identities=26% Similarity=0.359 Sum_probs=194.4
Q ss_pred CCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcc
Q 000475 1217 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSR 1296 (1470)
Q Consensus 1217 ~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~ 1296 (1470)
.+.|+++|++++ + .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~---~-~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLV---G-APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEe---c-ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 356999999985 2 3599999999999999999999999999999999999999999999998 4
Q ss_pred cEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000475 1297 LSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1376 (1470)
Q Consensus 1297 isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1376 (1470)
++|+||++.+|++|+++|+.......+.++.++++.+++.+.+..+|.+.++.+++.+.+||+|||||++|||||+++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998643445556778888899999999999999999998899999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHH-HHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHH
Q 000475 1377 ILVLDEATASIDTATDNVIQQT-IREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKL 1452 (1470)
Q Consensus 1377 ILlLDEaTsslD~~Td~~Iq~~-I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~l 1452 (1470)
||+|||||++||+++...+.+. +++..+++|||+|+|+++.+..||+|++|++|+++++|+++++.+. .+.|.+.
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~~ 255 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFSSK 255 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHHHH
Confidence 9999999999999999988764 4555568999999999999988999999999999999999999864 3445433
No 156
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.4e-39 Score=368.56 Aligned_cols=212 Identities=26% Similarity=0.428 Sum_probs=181.7
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHH-hcccE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL-RSRLS 1298 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~is 1298 (1470)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999963 359999999999999999999999999999999999999999999999999998877664 67899
Q ss_pred EEccCCCCCcc-cHHHhcCcCC----CC-------------CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChh
Q 000475 1299 IIPQDPMLFQG-TVRTNLDPLE----QH-------------SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVG 1360 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp~~----~~-------------sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgG 1360 (1470)
|+||+|.+|.+ |+++|+.... .. .++++.++++..++.+ ........||||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG 147 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLAD-----------LADRPAGELSYG 147 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccc-----------hhhCChhhCCHH
Confidence 99999999987 9999985321 10 1223445555555533 223344579999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000475 1361 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSP 1438 (1470)
Q Consensus 1361 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p 1438 (1470)
||||++|||||+++|++|+|||||++||+.+...+.+.|++.. +++|||+++|+++.+.. ||+|++|++|++++.|++
T Consensus 148 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 227 (236)
T cd03219 148 QQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTP 227 (236)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCH
Confidence 9999999999999999999999999999999999999998764 67899999999999976 999999999999999999
Q ss_pred hHHhhc
Q 000475 1439 RQLLED 1444 (1470)
Q Consensus 1439 ~~Ll~~ 1444 (1470)
+++.++
T Consensus 228 ~~~~~~ 233 (236)
T cd03219 228 DEVRNN 233 (236)
T ss_pred HHhccC
Confidence 998754
No 157
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=369.55 Aligned_cols=223 Identities=28% Similarity=0.448 Sum_probs=192.2
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCCCCHHHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMIGLQDL 1293 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i~l~~L 1293 (1470)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999964 3599999999999999999999999999999999999974 69999999999998888889
Q ss_pred hcccEEEccCCCCC-cccHHHhcCcC---CCC------CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1294 RSRLSIIPQDPMLF-QGTVRTNLDPL---EQH------SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1294 R~~isiIpQdp~LF-~gTIR~NLdp~---~~~------sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
|++++|+||+|.+| +.|+++|+... ... .++++.++++.+++.+.+. ..+|..+ .+|||||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~~----~~LSgG~~q 153 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK---DRLDAPA----GKLSGGQQQ 153 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh---hhhcCCc----ccCCHHHHH
Confidence 99999999999755 57999999631 111 1346788889888865432 2234443 579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|++|||||+++|+||+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 999999999999999999999999999999999999987678999999999999865 9999999999999999999998
Q ss_pred hcCCChHH
Q 000475 1443 EDNSSSFS 1450 (1470)
Q Consensus 1443 ~~~~s~f~ 1450 (1470)
+++...+.
T Consensus 234 ~~~~~~~~ 241 (250)
T PRK14247 234 TNPRHELT 241 (250)
T ss_pred cCCccHHH
Confidence 76554443
No 158
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-39 Score=369.40 Aligned_cols=220 Identities=25% Similarity=0.401 Sum_probs=187.7
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
++++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..++|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999753 459999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EccCCCCCc-ccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQ-GTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~-gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||+|.+|. .|+++|+.... ..+ ++++.++++..++.+. ......+.+||+|||||++||||+
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~---------~~~~~~~~~LS~G~~qrv~laral 150 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPA---------EFADRYPHELSGGQQQRVGVARAL 150 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcH---------HHHhcChhhCCHHHHHHHHHHHHH
Confidence 999999986 59999996321 122 3346677777776430 011233467999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCCh
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSS 1448 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s~ 1448 (1470)
+++|++|+|||||++||+.+...+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++.+++...
T Consensus 151 ~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~ 230 (242)
T cd03295 151 AADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPAND 230 (242)
T ss_pred hcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCCCh
Confidence 99999999999999999999999999999864 37999999999998765 9999999999999999999998654433
Q ss_pred H
Q 000475 1449 F 1449 (1470)
Q Consensus 1449 f 1449 (1470)
+
T Consensus 231 ~ 231 (242)
T cd03295 231 F 231 (242)
T ss_pred H
Confidence 3
No 159
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.6e-39 Score=385.75 Aligned_cols=217 Identities=24% Similarity=0.368 Sum_probs=190.9
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|+. ..+|+|+||++++||++||+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ |++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999964 3589999999999999999999999999999999999999999999999999887654 67899
Q ss_pred EEccCCCCCc-ccHHHhcCcC-C--CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1299 IIPQDPMLFQ-GTVRTNLDPL-E--QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1299 iIpQdp~LF~-gTIR~NLdp~-~--~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
|+||++.+|. .|+++|+... . ..+ ++++.++++..+|.++..+.| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYP-----------GQLSGGQQQRVALARA 148 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999999996 5999999732 1 122 345777888888766554333 4699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSS 1447 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s 1447 (1470)
|+++|++|+||||||+||..+...+++.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++++++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPAT 228 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCC
Confidence 9999999999999999999999999999987653 7899999999999866 999999999999999999999998876
Q ss_pred hHH
Q 000475 1448 SFS 1450 (1470)
Q Consensus 1448 ~f~ 1450 (1470)
.|.
T Consensus 229 ~~~ 231 (353)
T TIGR03265 229 PFV 231 (353)
T ss_pred HHH
Confidence 663
No 160
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-39 Score=366.98 Aligned_cols=214 Identities=28% Similarity=0.452 Sum_probs=185.8
Q ss_pred EEEEeEEEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHH---HHh
Q 000475 1220 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ---DLR 1294 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~--~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR 1294 (1470)
|+++|++++|+... .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999996431 2699999999999999999999999999999999999999999999999999877654 357
Q ss_pred cccEEEccCCCCCc-ccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000475 1295 SRLSIIPQDPMLFQ-GTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1295 ~~isiIpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
++++|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+..... ..+||+|||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAY-----------PAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcC-----------hhhCCHHHHHHHH
Confidence 89999999999997 5999998631 1122 34577888888886554332 2469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
||||++++|++|+|||||++||+.+...+.+.|++.. .++|||+++|+++.+.. ||++++|++|++++.|+++++++
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999999999999864 37899999999999876 99999999999999999999875
Q ss_pred c
Q 000475 1444 D 1444 (1470)
Q Consensus 1444 ~ 1444 (1470)
+
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 4
No 161
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.1e-39 Score=386.07 Aligned_cols=205 Identities=24% Similarity=0.406 Sum_probs=182.3
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHH----hcccEEEccCCCCCcc
Q 000475 1234 PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL----RSRLSIIPQDPMLFQG 1309 (1470)
Q Consensus 1234 ~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L----R~~isiIpQdp~LF~g 1309 (1470)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.|||.|+...+..++ |++++|+||++.+|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 458999999999999999999999999999999999999999999999999999998887 7899999999999975
Q ss_pred -cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000475 1310 -TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLD 1381 (1470)
Q Consensus 1310 -TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLD 1381 (1470)
|+++|+... ...+ ++++.++|+.++|.++..+.| .+||||||||++|||||+++|+||+||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----------~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP-----------DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh-----------hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999632 1122 356778899998876655444 469999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChH
Q 000475 1382 EATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSF 1449 (1470)
Q Consensus 1382 EaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f 1449 (1470)
||||+||+.+.+.+++.+++.. .++|||+|||+++.+.. ||||++|++|++++.|+|+++++++...|
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 9999999999999999998764 37999999999998755 99999999999999999999998765544
No 162
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-39 Score=370.86 Aligned_cols=222 Identities=23% Similarity=0.457 Sum_probs=190.4
Q ss_pred CCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEEcCEeCCC--C
Q 000475 1216 SSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--I 1288 (1470)
Q Consensus 1216 ~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i 1288 (1470)
....|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .
T Consensus 10 ~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~ 87 (269)
T PRK14259 10 KNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRV 87 (269)
T ss_pred CCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccC
Confidence 3457999999999964 359999999999999999999999999999999999987 689999999999863 5
Q ss_pred CHHHHhcccEEEccCCCCCcccHHHhcCcCC---CC---CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000475 1289 GLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE---QH---SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1362 (1470)
Q Consensus 1289 ~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~---~~---sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQr 1362 (1470)
+..++|++++|+||+|.+|..|+++|+.... .. .++++.++++.+++.+.+.. .+| ....+||+|||
T Consensus 88 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~---~~~----~~~~~LS~G~~ 160 (269)
T PRK14259 88 DPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECKD---KLN----ESGYSLSGGQQ 160 (269)
T ss_pred CHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhhh---hhC----CCcccCCHHHH
Confidence 6678899999999999999899999997432 11 23456777888877543221 223 33467999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeC-----------C
Q 000475 1363 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDE-----------G 1430 (1470)
Q Consensus 1363 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~-----------G 1430 (1470)
||++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||++||+++.+.+ ||+|++|++ |
T Consensus 161 qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g 240 (269)
T PRK14259 161 QRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVG 240 (269)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccc
Confidence 9999999999999999999999999999999999999987667899999999999866 999999996 6
Q ss_pred EEEEecChhHHhhcCC
Q 000475 1431 KVLEYDSPRQLLEDNS 1446 (1470)
Q Consensus 1431 ~vvE~g~p~~Ll~~~~ 1446 (1470)
+++|.|++.++++++.
T Consensus 241 ~~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 241 YLVEFNETKKIFNSPK 256 (269)
T ss_pred eEEEeCCHHHHHhCcC
Confidence 7999999999987654
No 163
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-39 Score=370.88 Aligned_cols=223 Identities=23% Similarity=0.396 Sum_probs=191.9
Q ss_pred CCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCC--C
Q 000475 1216 SSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISM--I 1288 (1470)
Q Consensus 1216 ~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i 1288 (1470)
+.+.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3568999999999964 3599999999999999999999999999999999999975 89999999999975 3
Q ss_pred CHHHHhcccEEEccCCCCCcccHHHhcCcC---CCC--C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCCh
Q 000475 1289 GLQDLRSRLSIIPQDPMLFQGTVRTNLDPL---EQH--S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSV 1359 (1470)
Q Consensus 1289 ~l~~LR~~isiIpQdp~LF~gTIR~NLdp~---~~~--s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSg 1359 (1470)
+...+|++++++||+|.+|.+|+++|+... ... + ++++.++++.+++.+.+.. .+ ...+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~----~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKD---RL----HEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhH---Hh----hCCcccCCH
Confidence 456788999999999999989999999631 111 1 3456788888888654432 12 234567999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000475 1360 GQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSP 1438 (1470)
Q Consensus 1360 GQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p 1438 (1470)
|||||++|||||+.+|++|+|||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999987667899999999999965 899999999999999999
Q ss_pred hHHhhcCCC
Q 000475 1439 RQLLEDNSS 1447 (1470)
Q Consensus 1439 ~~Ll~~~~s 1447 (1470)
++++.++..
T Consensus 247 ~~~~~~~~~ 255 (267)
T PRK14235 247 EKMFTNPDD 255 (267)
T ss_pred HHHHhCCCC
Confidence 999865543
No 164
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-39 Score=376.04 Aligned_cols=215 Identities=26% Similarity=0.418 Sum_probs=183.0
Q ss_pred EEEEeEEEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCC----CHHH
Q 000475 1220 IELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI----GLQD 1292 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~---~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~~ 1292 (1470)
|+++|++++|+++. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996432 3599999999999999999999999999999999999999999999999999764 3467
Q ss_pred HhcccEEEccCC--CCCcccHHHhcCcCC---CCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1293 LRSRLSIIPQDP--MLFQGTVRTNLDPLE---QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1293 LR~~isiIpQdp--~LF~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
+|++|+|+||+| .+|..|+++|+.... ..+. +.+.++++.+++.. ........+|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~q 152 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSR----------DVMSQSPFQMSGGQMR 152 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHHH
Confidence 899999999998 688899999996321 2233 23445555555531 1122345689999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1440 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~ 1440 (1470)
|++|||||+.+|+||+|||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|+|.+
T Consensus 153 rv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~ 232 (286)
T PRK13646 153 KIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKE 232 (286)
T ss_pred HHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999999863 47999999999999864 99999999999999999999
Q ss_pred Hhhc
Q 000475 1441 LLED 1444 (1470)
Q Consensus 1441 Ll~~ 1444 (1470)
++++
T Consensus 233 ~~~~ 236 (286)
T PRK13646 233 LFKD 236 (286)
T ss_pred HHhC
Confidence 8764
No 165
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.4e-39 Score=368.37 Aligned_cols=211 Identities=28% Similarity=0.422 Sum_probs=182.7
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCH---HHHhcc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL---QDLRSR 1296 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l---~~LR~~ 1296 (1470)
|+++|++++|+.+ .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPNG-KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCCC-cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 6899999999623 459999999999999999999999999999999999999999999999999987654 447889
Q ss_pred cEEEccCCCCCc-ccHHHhcCcCC------------C---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChh
Q 000475 1297 LSIIPQDPMLFQ-GTVRTNLDPLE------------Q---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVG 1360 (1470)
Q Consensus 1297 isiIpQdp~LF~-gTIR~NLdp~~------------~---~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgG 1360 (1470)
++|+||++.+|. .|+++|+.... . ..++++.++++.+++.+... ....+||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG 149 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAY-----------QRADQLSGG 149 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHH
Confidence 999999998886 59999995310 1 12345677788887765432 234579999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecC
Q 000475 1361 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDS 1437 (1470)
Q Consensus 1361 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~ 1437 (1470)
||||++|||||+++|++|+|||||++||+++.+.+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|++++.|+
T Consensus 150 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 229 (243)
T TIGR02315 150 QQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGA 229 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCC
Confidence 9999999999999999999999999999999999999998864 37899999999999865 99999999999999999
Q ss_pred hhHHh
Q 000475 1438 PRQLL 1442 (1470)
Q Consensus 1438 p~~Ll 1442 (1470)
++++.
T Consensus 230 ~~~~~ 234 (243)
T TIGR02315 230 PSELD 234 (243)
T ss_pred HHHhC
Confidence 99874
No 166
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=369.84 Aligned_cols=222 Identities=29% Similarity=0.414 Sum_probs=189.4
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCC--CCCHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDIS--MIGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~--~i~l~ 1291 (1470)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 4899999999964 3599999999999999999999999999999999999987 4999999999997 45566
Q ss_pred HHhcccEEEccCCCCCcc-cHHHhcCcC---CC--CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000475 1292 DLRSRLSIIPQDPMLFQG-TVRTNLDPL---EQ--HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1361 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~g-TIR~NLdp~---~~--~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQ 1361 (1470)
.+|++++++||+|.+|.+ |+++|+... .. .. ++++.++++..++.+.+.. .++ ....+|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LS~G~ 154 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKD---RLN----DYPSNLSGGQ 154 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhh---hhc----cChhhCCHHH
Confidence 789999999999999976 999999631 11 11 2456777888877544321 123 3446799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000475 1362 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1440 (1470)
Q Consensus 1362 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~ 1440 (1470)
|||++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRK 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667999999999999876 99999999999999999999
Q ss_pred HhhcCCChH
Q 000475 1441 LLEDNSSSF 1449 (1470)
Q Consensus 1441 Ll~~~~s~f 1449 (1470)
+++++...+
T Consensus 235 ~~~~~~~~~ 243 (253)
T PRK14267 235 VFENPEHEL 243 (253)
T ss_pred HHhCCCcHH
Confidence 987554334
No 167
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-39 Score=375.58 Aligned_cols=214 Identities=27% Similarity=0.400 Sum_probs=184.4
Q ss_pred EEEEeEEEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCC----CCHHH
Q 000475 1220 IELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM----IGLQD 1292 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~---~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~----i~l~~ 1292 (1470)
|+++|++++|+++. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997543 259999999999999999999999999999999999999999999999999963 34567
Q ss_pred HhcccEEEccCC--CCCcccHHHhcCcCC---CCCH----HHHHHHHHHcCcH-HHHHhcccccCccccCCCCCCChhHH
Q 000475 1293 LRSRLSIIPQDP--MLFQGTVRTNLDPLE---QHSD----QEIWEVINKCHLA-EIVRQDQRLLDAPVAEDGENWSVGQR 1362 (1470)
Q Consensus 1293 LR~~isiIpQdp--~LF~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~-~~v~~lp~gLdt~v~e~G~nLSgGQr 1362 (1470)
+|++++|++|+| .+|..|+.+|+.... ..+. +++.++++.+++. ++. + ....+||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-------~----~~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFW-------E----KSPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhc-------c----CCcccCCHHHH
Confidence 899999999998 789999999996321 1222 3466777777773 232 2 23457999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000475 1363 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1440 (1470)
Q Consensus 1363 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~ 1440 (1470)
||++|||||+.+|+||||||||++||+.+...+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+|++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998754 47899999999998854 99999999999999999999
Q ss_pred Hhhc
Q 000475 1441 LLED 1444 (1470)
Q Consensus 1441 Ll~~ 1444 (1470)
+.++
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 8753
No 168
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-39 Score=374.54 Aligned_cols=214 Identities=30% Similarity=0.471 Sum_probs=186.3
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCC--CCCHHHHhcc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDIS--MIGLQDLRSR 1296 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~--~i~l~~LR~~ 1296 (1470)
-|+++|++++|+++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+..++|++
T Consensus 5 ~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 48999999999633 45999999999999999999999999999999999999999999999999984 3446678999
Q ss_pred cEEEccCC--CCCcccHHHhcCcC---CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHH
Q 000475 1297 LSIIPQDP--MLFQGTVRTNLDPL---EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCL 1367 (1470)
Q Consensus 1297 isiIpQdp--~LF~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1367 (1470)
++|+||+| .+|+.|+++|+... ...+. +.+.++++.+++.++. |. ...+||+|||||++|
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-------~~----~~~~LS~G~~qrl~l 152 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-------DK----PTHCLSFGQKKRVAI 152 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-------hC----CcccCCHHHHHHHHH
Confidence 99999998 57889999999642 12232 3466777888886543 22 345799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1368 ARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1368 ARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
||||+++|+||+|||||++||+++...+.+.|++..+ ++|||+++|+++.+.. ||||++|++|++++.|+++++++.
T Consensus 153 araL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 153 AGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999988653 7999999999999974 999999999999999999998763
No 169
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-39 Score=371.23 Aligned_cols=215 Identities=27% Similarity=0.471 Sum_probs=188.3
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|+.+.+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 58999999999644456999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEccCC--CCCcccHHHhcCcC---CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1299 IIPQDP--MLFQGTVRTNLDPL---EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1299 iIpQdp--~LF~gTIR~NLdp~---~~~sd~----eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
|+||+| .++..|+++|+... ...+++ .+.++++..++.++.... ..+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lar 155 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKE-----------PQNLSGGQKQRVAIAS 155 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------cccCCHHHHHHHHHHH
Confidence 999998 45677999999642 123333 356677888876654433 3579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
||+++|++|+|||||++||+.+.+.+.+.|++..+ ++|||+++|+++.+..||+|++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 156 VLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998643 4899999999999888999999999999999999998764
No 170
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-39 Score=361.49 Aligned_cols=202 Identities=26% Similarity=0.416 Sum_probs=175.2
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEEE
Confidence 578999999964 35999999999999999999999999999999999999999999999999998654 35778999
Q ss_pred EccCCCCCc-ccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQ-GTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||+|.+|. .|+++|+... ...+ ++++.++++.+++.++....| .+||||||||++|||||
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~al 145 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYP-----------HELSGGQQQRVALARAL 145 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHHHHHHHH
Confidence 999998886 5999999632 1112 345677888888866544332 46999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
+++|++|+|||||++||+++...+.+.|++.. .++|||+++|+++.+.+ ||+|++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999864 37899999999999866 9999999999998865
No 171
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=4.8e-39 Score=381.69 Aligned_cols=216 Identities=25% Similarity=0.419 Sum_probs=189.3
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+...+. .|++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 3789999999964 359999999999999999999999999999999999999999999999999987653 467899
Q ss_pred EEccCCCCCcc-cHHHhcCcC-C------CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000475 1299 IIPQDPMLFQG-TVRTNLDPL-E------QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp~-~------~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
|+||++.+|.. |+++|+... . ..+ ++++.++++.+++.++..+.| ..||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----------AQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 99999999975 999999732 1 122 345677888888866544333 469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
|||||+++|++|+|||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|+++++
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999988654 6899999999999876 99999999999999999999998
Q ss_pred cCCChH
Q 000475 1444 DNSSSF 1449 (1470)
Q Consensus 1444 ~~~s~f 1449 (1470)
++...|
T Consensus 227 ~p~~~~ 232 (353)
T PRK10851 227 EPATRF 232 (353)
T ss_pred CccchH
Confidence 776555
No 172
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-39 Score=363.75 Aligned_cols=208 Identities=24% Similarity=0.362 Sum_probs=180.2
Q ss_pred cEEEEeEEEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH---H
Q 000475 1219 KIELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---L 1293 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~--~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---L 1293 (1470)
.++++||+++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.++ +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997532 46999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cccEEEccCCCCCcc-cHHHhcCc---CCCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1294 R-SRLSIIPQDPMLFQG-TVRTNLDP---LEQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1294 R-~~isiIpQdp~LF~g-TIR~NLdp---~~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
| ++++|+||+|.+|.+ |+++|+.. ..... ++++.++++.+++.+.... ...+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANH-----------RPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHH
Confidence 3 689999999998876 99999863 11222 3456778888877554322 235799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeCCEEEEecC
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDS 1437 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~ 1437 (1470)
++||||++++|+||+|||||++||+++...+.+.|++.. +++|||+|+|+++.+..+|++++|++|++++.++
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999998863 4799999999999999999999999999998775
No 173
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-39 Score=372.29 Aligned_cols=217 Identities=24% Similarity=0.406 Sum_probs=186.8
Q ss_pred EEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHH----hcc
Q 000475 1221 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL----RSR 1296 (1470)
Q Consensus 1221 ~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L----R~~ 1296 (1470)
.++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 45678888854 358999999999999999999999999999999999999999999999999988765543 468
Q ss_pred cEEEccCCCCCc-ccHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1297 LSIIPQDPMLFQ-GTVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1297 isiIpQdp~LF~-gTIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
++|+||+|.+|. .|+++|+... ... .++++.++++.+++.++....| .+||+|||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 999999999885 5999999631 111 2345778888998877655443 36999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1445 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~ 1445 (1470)
|||+++|+||+|||||++||+.+.+.+.+.|++.. .++|||+++|+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 252 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNP 252 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCc
Confidence 99999999999999999999999999999998864 37999999999999865 9999999999999999999998766
Q ss_pred CChHH
Q 000475 1446 SSSFS 1450 (1470)
Q Consensus 1446 ~s~f~ 1450 (1470)
...|.
T Consensus 253 ~~~~~ 257 (269)
T cd03294 253 ANDYV 257 (269)
T ss_pred CcHHH
Confidence 55544
No 174
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.8e-39 Score=363.36 Aligned_cols=211 Identities=27% Similarity=0.391 Sum_probs=181.9
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.+ .+++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~-~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRA-ALARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChh-hhhhEEE
Confidence 689999999963 3599999999999999999999999999999999999999999999999999877654 4468999
Q ss_pred EccCCCC-CcccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPML-FQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~L-F~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||+|.+ +..|+++|+.... ..+ ++++.+.++..++.+. ......+||||||||++|||||
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrl~laral 147 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAER-----------ADDKVRELNGGHRRRVEIARAL 147 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hcCChhhCCHHHHHHHHHHHHH
Confidence 9999987 5679999996431 122 2345566666666432 2333457999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
+++|+||+|||||++||+.+.+.+.+.|++.. .++|+|+++|+++.+..||+|++|++|++++.|+++++.++
T Consensus 148 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 148 LHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999999864 47899999999999988999999999999999999999864
No 175
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-39 Score=377.36 Aligned_cols=225 Identities=25% Similarity=0.401 Sum_probs=190.9
Q ss_pred cEEEEeEEEEeCCC--------CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCH
Q 000475 1219 KIELENLLVQYNPT--------LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL 1290 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~--------~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l 1290 (1470)
-|+++|++++|+.. ...+|+||||+|++||++||||+||||||||+++|.|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 48999999999631 2369999999999999999999999999999999999999999999999999998875
Q ss_pred H---HHhcccEEEccCCC--CCcc-cHHHhcC-cC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCC
Q 000475 1291 Q---DLRSRLSIIPQDPM--LFQG-TVRTNLD-PL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGEN 1356 (1470)
Q Consensus 1291 ~---~LR~~isiIpQdp~--LF~g-TIR~NLd-p~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~n 1356 (1470)
. .+|+++++|||||. |+.. |+.+|+. +. ...+ .+++.++|++++|.+ ..+|... ..
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~~~p----~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYDRYP----HM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhcCCC----cc
Confidence 4 56889999999994 5553 8888874 21 1122 245678888888842 2234433 46
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000475 1357 WSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVL 1433 (1470)
Q Consensus 1357 LSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vv 1433 (1470)
||||||||++|||||+.+|++||+||||++||..+...|.+.|++.. .++|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998764 37999999999999975 9999999999999
Q ss_pred EecChhHHhhcCCChHHHHH
Q 000475 1434 EYDSPRQLLEDNSSSFSKLV 1453 (1470)
Q Consensus 1434 E~g~p~~Ll~~~~s~f~~lv 1453 (1470)
|.|+++++++++...|.+..
T Consensus 235 e~g~~~~~~~~p~hpyt~~l 254 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQAL 254 (327)
T ss_pred EECCHHHHhcCCCCHHHHHH
Confidence 99999999988766666543
No 176
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.4e-39 Score=362.05 Aligned_cols=212 Identities=25% Similarity=0.424 Sum_probs=178.6
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHH-hcccE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL-RSRLS 1298 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~is 1298 (1470)
|+++|++++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK--SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC--eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 578999999964 359999999999999999999999999999999999999999999999999988877664 67899
Q ss_pred EEccCCCCCcc-cHHHhcCcCCC-CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHc
Q 000475 1299 IIPQDPMLFQG-TVRTNLDPLEQ-HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLL 1372 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp~~~-~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL 1372 (1470)
|+||+|.+|.+ |+++|+..... .. .+++.++++..+ .+++.++. ...+||+|||||++|||||+
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~------~l~~~~~~----~~~~LS~G~~qrv~laral~ 148 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP------RLKERRKQ----LAGTLSGGEQQMLAIARALM 148 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH------hhhhhhhC----chhhCCHHHHHHHHHHHHHh
Confidence 99999999987 99999964321 11 112223333321 12222333 34579999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1373 KKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1373 r~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
++|++|+|||||++||+++...+.+.|++.. .++|||+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 149 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 149 SRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred cCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999998764 57899999999999866 99999999999999999988764
No 177
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.9e-39 Score=348.72 Aligned_cols=178 Identities=35% Similarity=0.559 Sum_probs=166.6
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+...+++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999975434699999999999999999999999999999999999999999999999998776 6678999999
Q ss_pred EccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000475 1300 IPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILV 1379 (1470)
Q Consensus 1300 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILl 1379 (1470)
+||+|.+|+.|+++|+ ..+||+|||||++||||++++|++|+
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999997 35799999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEec
Q 000475 1380 LDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1380 LDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g 1436 (1470)
|||||++||+.+.+.+.+.|++..+++|+|+++|+++.+..||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999877789999999999999889999999999999865
No 178
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=8.2e-39 Score=376.86 Aligned_cols=223 Identities=23% Similarity=0.378 Sum_probs=189.3
Q ss_pred cEEEEeEEEEeCCC-----------CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCC
Q 000475 1219 KIELENLLVQYNPT-----------LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM 1287 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~-----------~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~ 1287 (1470)
-++++|++++|+.. ...+++|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 58999999999631 2369999999999999999999999999999999999999999999999999998
Q ss_pred CCHHH---HhcccEEEccCC--CCC-cccHHHhcCc----CC-CCCH----HHHHHHHHHcCcHHHHHhcccccCccccC
Q 000475 1288 IGLQD---LRSRLSIIPQDP--MLF-QGTVRTNLDP----LE-QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAE 1352 (1470)
Q Consensus 1288 i~l~~---LR~~isiIpQdp--~LF-~gTIR~NLdp----~~-~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e 1352 (1470)
++.++ +|++++||||+| .++ ..||++|+.. .. ..+. +.+.++++.+++.+. .++.
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~------~~~~---- 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPN------LINR---- 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChH------HhcC----
Confidence 87544 678999999999 477 4699999852 11 2333 334567777777321 1222
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeC
Q 000475 1353 DGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDE 1429 (1470)
Q Consensus 1353 ~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~ 1429 (1470)
....||||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 2357999999999999999999999999999999999999999999987643 7899999999999976 999999999
Q ss_pred CEEEEecChhHHhhcCCChHHH
Q 000475 1430 GKVLEYDSPRQLLEDNSSSFSK 1451 (1470)
Q Consensus 1430 G~vvE~g~p~~Ll~~~~s~f~~ 1451 (1470)
|+++|.|+++++++++...|.+
T Consensus 238 G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHH
Confidence 9999999999999877666655
No 179
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-39 Score=370.53 Aligned_cols=216 Identities=27% Similarity=0.447 Sum_probs=191.1
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCC---cEEEEcCEeCCCCCHHHHh
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSG---GRILIDGVDISMIGLQDLR 1294 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~---G~I~IDG~dI~~i~l~~LR 1294 (1470)
+.|+++|++++|++...++|+|+||+|++||++||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999996543459999999999999999999999999999999999999987 8999999999888777889
Q ss_pred cccEEEccCC--CCCcccHHHhcCcC---CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000475 1295 SRLSIIPQDP--MLFQGTVRTNLDPL---EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1365 (1470)
Q Consensus 1295 ~~isiIpQdp--~LF~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl 1365 (1470)
++++|+||+| .+++.|+++|+... ...++ +++.++++.+++.++....| .+||+|||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHH
Confidence 9999999998 46788999999742 12333 34778899999877654443 47999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhh
Q 000475 1366 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1366 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
+|||||+++|++|||||||++||+.+...+.+.|++..+ ++|||+++|+++.+..||+|++|++|++++.|+++++++
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999988653 789999999999998899999999999999999998875
Q ss_pred c
Q 000475 1444 D 1444 (1470)
Q Consensus 1444 ~ 1444 (1470)
+
T Consensus 233 ~ 233 (282)
T PRK13640 233 K 233 (282)
T ss_pred C
Confidence 3
No 180
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-39 Score=366.71 Aligned_cols=222 Identities=23% Similarity=0.396 Sum_probs=189.3
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcC---CCC--CCcEEEEcCEeCCCC--CHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRV---VEP--SGGRILIDGVDISMI--GLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl---~~p--~~G~I~IDG~dI~~i--~l~ 1291 (1470)
.|+++|++++|++ ..+|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 5899999999964 3599999999999999999999999999999999997 344 589999999999764 346
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcC---CC-----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPL---EQ-----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~---~~-----~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
.+|++++|+||+|.+|.+|+++|+... .. ..+++++++++.+++.+.+.. .....+.+|||||||
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 153 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKD-------KLKESAFALSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhh-------hhhCCcccCCHHHHH
Confidence 788899999999999999999999631 11 123457788888887554422 123445679999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|++++++
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999865 9999999999999999999998
Q ss_pred hcCCChH
Q 000475 1443 EDNSSSF 1449 (1470)
Q Consensus 1443 ~~~~s~f 1449 (1470)
+++...+
T Consensus 234 ~~~~~~~ 240 (250)
T PRK14245 234 TNPEKEA 240 (250)
T ss_pred cCCCChH
Confidence 7654433
No 181
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=368.86 Aligned_cols=221 Identities=24% Similarity=0.414 Sum_probs=189.4
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEEcCEeCCCCC--HHH
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISMIG--LQD 1292 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~i~--l~~ 1292 (1470)
-+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.++|.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999963 469999999999999999999999999999999999986 47999999999987653 346
Q ss_pred HhcccEEEccCCCCCcccHHHhcCcC---CC------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1293 LRSRLSIIPQDPMLFQGTVRTNLDPL---EQ------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1293 LR~~isiIpQdp~LF~gTIR~NLdp~---~~------~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
+|++++|+||+|.+|.+|+++|+... .. ..++++.++++..++.+.+. +.+...+.+||+||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~q 156 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQQ 156 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHHH
Confidence 78999999999999999999998631 11 12345677888888755322 1223345679999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|++|||||+++|+||+|||||++||+.+.+.+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|++++++
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987778999999999999876 9999999999999999999999
Q ss_pred hcCCChH
Q 000475 1443 EDNSSSF 1449 (1470)
Q Consensus 1443 ~~~~s~f 1449 (1470)
+++...+
T Consensus 237 ~~~~~~~ 243 (251)
T PRK14244 237 KNPQSSK 243 (251)
T ss_pred cCCCChH
Confidence 8766554
No 182
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=5.3e-39 Score=359.44 Aligned_cols=205 Identities=25% Similarity=0.406 Sum_probs=178.5
Q ss_pred EEEEeEEEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1220 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~--~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
|+++|++++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...++|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 68999999996432 269999999999999999999999999999999999999999999999999976 456788999
Q ss_pred EEEccCCCCCcc-cHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
+++||+|.+|.+ |+++|+... ... .++++.++++..++.+.... ...+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDR-----------RVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhh-----------hhhhcCHHHHHHHHHHH
Confidence 999999999986 999998531 112 23457778888888665433 23579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
|++++|++|+|||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999998864 47999999999999876 9999999999998865
No 183
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.9e-39 Score=376.10 Aligned_cols=213 Identities=25% Similarity=0.400 Sum_probs=186.1
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
..|+++|++++|+. ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.++|.|+...+ ...|+++
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999964 46999999999999999999999999999999999999999999999999998754 4579999
Q ss_pred EEEccCCCCCc-ccHHHhcCcCC---CCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1298 SIIPQDPMLFQ-GTVRTNLDPLE---QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1298 siIpQdp~LF~-gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
+|+||+|.+|. .|+++|+..+. ..++ +++.++++.+++.+ ..+++++ +||+|||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~----~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLEN-------KADAKVG----ELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-------HhcCchh----hCCHHHHHHHHHHH
Confidence 99999999886 59999997422 1232 33556677776643 3455553 69999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
||+++|++|+|||||++||+.+...+++.|++.. +++|||++||+++.+.. ||||++|++|++++.|+|+++.++
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999864 47899999999999976 999999999999999999999765
No 184
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=367.53 Aligned_cols=220 Identities=26% Similarity=0.441 Sum_probs=190.8
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEEcCEeCCC--CCH
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IGL 1290 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l 1290 (1470)
..|+++|++++|+. .++|+|+||++++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 36999999999953 459999999999999999999999999999999999996 589999999999964 346
Q ss_pred HHHhcccEEEccCCCCCcccHHHhcCcC----CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000475 1291 QDLRSRLSIIPQDPMLFQGTVRTNLDPL----EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1362 (1470)
Q Consensus 1291 ~~LR~~isiIpQdp~LF~gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQr 1362 (1470)
..+|+.++|+||+|.+|.+|+++|+... +.. .++++.++++.+++.+.+.. ........||+|||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~ 169 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKD-------DLHKSALTLSGGQQ 169 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhh-------hhcCCcccCCHHHH
Confidence 6789999999999999999999999642 111 23456778888888655432 23345568999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000475 1363 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1441 (1470)
Q Consensus 1363 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~L 1441 (1470)
||++||||++++|++|+|||||++||+.+...+.+.|++..++.|||+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 170 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14237 170 QRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNI 249 (267)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999866 999999999999999999999
Q ss_pred hhcCC
Q 000475 1442 LEDNS 1446 (1470)
Q Consensus 1442 l~~~~ 1446 (1470)
.+.+.
T Consensus 250 ~~~~~ 254 (267)
T PRK14237 250 FTNPK 254 (267)
T ss_pred hcCCC
Confidence 86543
No 185
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=8.5e-39 Score=366.60 Aligned_cols=218 Identities=27% Similarity=0.400 Sum_probs=187.6
Q ss_pred CCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCC-------
Q 000475 1217 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG------- 1289 (1470)
Q Consensus 1217 ~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~------- 1289 (1470)
.+.++++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+.
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999964 35999999999999999999999999999999999999999999999999986431
Q ss_pred ------HHHHhcccEEEccCCCCCcc-cHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCC
Q 000475 1290 ------LQDLRSRLSIIPQDPMLFQG-TVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDG 1354 (1470)
Q Consensus 1290 ------l~~LR~~isiIpQdp~LF~g-TIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G 1354 (1470)
...+|++++|+||+|.+|.+ |+++|+... .... ++++.++++..++.+... ....
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----------~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQ----------GKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhh----------hCCc
Confidence 34678899999999999975 999999631 1112 345677778777755431 2234
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEE
Q 000475 1355 ENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKV 1432 (1470)
Q Consensus 1355 ~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~v 1432 (1470)
..||+|||||++|||||+++|++|+|||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+.. ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 5799999999999999999999999999999999999999999998864 47999999999999987 999999999999
Q ss_pred EEecChhHHhhcCC
Q 000475 1433 LEYDSPRQLLEDNS 1446 (1470)
Q Consensus 1433 vE~g~p~~Ll~~~~ 1446 (1470)
++.|+++++++.+.
T Consensus 231 ~~~~~~~~~~~~~~ 244 (257)
T PRK10619 231 EEEGAPEQLFGNPQ 244 (257)
T ss_pred EEeCCHHHhhhCcc
Confidence 99999999986543
No 186
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-39 Score=367.83 Aligned_cols=222 Identities=25% Similarity=0.409 Sum_probs=189.7
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCCC--CHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMI--GLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1291 (1470)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 12 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 12 QIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 6999999999963 3599999999999999999999999999999999999985 799999999998653 345
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
.+|++++|+||+|.+|..|+++|+... ...+ ++++.++++.+++.+.+. ..++++ ...||||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~----~~~LSgG~~qr 162 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS---DRLKSP----ALSLSGGQQQR 162 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh---hhhcCC----hhhCCHHHHHH
Confidence 678899999999999999999999631 1222 234677888887753321 223443 45799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
++|||||+++|+||+|||||++||+++...+.+.|++..+++|||+|+|+++.+.+ ||+|++|++|++++.|+|+++.+
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999987668999999999999876 99999999999999999999987
Q ss_pred cCCChH
Q 000475 1444 DNSSSF 1449 (1470)
Q Consensus 1444 ~~~s~f 1449 (1470)
++...+
T Consensus 243 ~~~~~~ 248 (258)
T PRK14268 243 NPREKS 248 (258)
T ss_pred CCCCHH
Confidence 655544
No 187
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=6e-39 Score=384.34 Aligned_cols=213 Identities=27% Similarity=0.452 Sum_probs=190.5
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.++++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++.+++..++|++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999964 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCC-CcccHHHhcCcCC-----------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000475 1299 IIPQDPML-FQGTVRTNLDPLE-----------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1299 iIpQdp~L-F~gTIR~NLdp~~-----------~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
++||++.+ |+.|+++|+.... ...++.+.++++.+++.++.. .++ ..||||||||++
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~-------~~~----~~LSgGerQRv~ 149 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFAD-------RPV----TSLSGGERQRVL 149 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhc-------CCh----hhCCHHHHHHHH
Confidence 99999987 6779999995321 112446889999999876543 333 469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
|||||+++|+||+|||||++||+.+...+.+.|++.. .+.|||+++|+++.+.. ||||++|++|++++.|+|++++..
T Consensus 150 IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 150 LARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 9999999999999999999999999999999999865 47899999999999965 999999999999999999999864
No 188
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-39 Score=383.64 Aligned_cols=216 Identities=23% Similarity=0.349 Sum_probs=188.9
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999964 3599999999999999999999999999999999999999999999999999876653 57899
Q ss_pred EEccCCCCCcc-cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1299 IIPQDPMLFQG-TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
|+||++.+|.. |+++|+... ...+ ++++.++++.+++.++..+.| .+||||||||++||||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLAra 147 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGRT 147 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999976 999999642 1122 345778888888876544333 4699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSS 1447 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s 1447 (1470)
|+++|++|+||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++..
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~ 227 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPAN 227 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccc
Confidence 9999999999999999999999999999987643 7899999999998865 999999999999999999999987765
Q ss_pred hH
Q 000475 1448 SF 1449 (1470)
Q Consensus 1448 ~f 1449 (1470)
.|
T Consensus 228 ~~ 229 (369)
T PRK11000 228 RF 229 (369)
T ss_pred HH
Confidence 55
No 189
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.2e-39 Score=358.79 Aligned_cols=208 Identities=26% Similarity=0.410 Sum_probs=181.4
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++|++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEE
Confidence 578999999964 3599999999999999999999999999999999999999999999999998763 3567889999
Q ss_pred EccCCCCCcc-cHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQG-TVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||+|.++.+ |+++|+... ... .++++.++++.+++.+.... ++ .+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~----~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADR-------LV----KTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-------Ch----hhCCHHHHHHHHHHHHH
Confidence 9999998876 999999531 111 23457788898888765433 23 46999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1441 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~L 1441 (1470)
+.+|++|+|||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999987642 6899999999999876 999999999999999998764
No 190
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-39 Score=370.24 Aligned_cols=213 Identities=25% Similarity=0.436 Sum_probs=188.1
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
++++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++|
T Consensus 4 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 4 IETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred EEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 7899999999643 349999999999999999999999999999999999999999999999999988788889999999
Q ss_pred EccCC--CCCcccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1300 IPQDP--MLFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1300 IpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
+||+| .+|+.|+++|+.... ..+ ++.+.++++.+++.+.....| ..||+|||||++||||
T Consensus 83 v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~lara 151 (277)
T PRK13652 83 VFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAIAGV 151 (277)
T ss_pred EecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHHHHH
Confidence 99998 478889999996311 223 335778888888876654433 3699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
|+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.+ ||||++|++|++++.|+++++++.
T Consensus 152 L~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 152 IAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 9999999999999999999999999999987643 7899999999999964 999999999999999999999764
No 191
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-39 Score=366.47 Aligned_cols=222 Identities=25% Similarity=0.398 Sum_probs=188.6
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEEcCEeCCC--CCHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1291 (1470)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999964 359999999999999999999999999999999999997 479999999999864 3455
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcCC---CC-----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPLE---QH-----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~~---~~-----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
.+|+.++++||+|.+|++|+++|+.... .. .++++.++++.+++++.. +..++. ...+||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~~----~~~~LS~Gq~q 154 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET---KDNLDR----NAQAFSGGQQQ 154 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch---HHHhcc----ChhhCCHHHHH
Confidence 6788999999999999999999997421 11 124566777777774321 122333 44679999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|++||||++++|++|+|||||++||+++...+.+.|++..+++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987677999999999999876 9999999999999999999998
Q ss_pred hcCCChH
Q 000475 1443 EDNSSSF 1449 (1470)
Q Consensus 1443 ~~~~s~f 1449 (1470)
.++.-.|
T Consensus 235 ~~~~~~~ 241 (251)
T PRK14251 235 IAPKKQI 241 (251)
T ss_pred hCCCCHH
Confidence 6554434
No 192
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.6e-39 Score=381.50 Aligned_cols=218 Identities=22% Similarity=0.405 Sum_probs=191.3
Q ss_pred CCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCC--cEEEEcCEeCCCCCHHHHh
Q 000475 1217 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSG--GRILIDGVDISMIGLQDLR 1294 (1470)
Q Consensus 1217 ~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~--G~I~IDG~dI~~i~l~~LR 1294 (1470)
.|.|+++|++++|+. ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++ |+|.+||.++...+. .+
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 468999999999964 359999999999999999999999999999999999999999 999999999987665 36
Q ss_pred cccEEEccCCCCCcc-cHHHhcCc-C--CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000475 1295 SRLSIIPQDPMLFQG-TVRTNLDP-L--EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1295 ~~isiIpQdp~LF~g-TIR~NLdp-~--~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
+++++++|++.+|.. |+++|+.. . ...+ ++++.++++.++|.++..+.| .+||||||||++
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHHH
Confidence 789999999999977 99999963 2 1223 234667788888876654444 469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC---CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS---RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~---~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|||||+++|++|+||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999987543 6899999999999866 9999999999999999999999
Q ss_pred hcCCChH
Q 000475 1443 EDNSSSF 1449 (1470)
Q Consensus 1443 ~~~~s~f 1449 (1470)
+++...|
T Consensus 228 ~~p~~~~ 234 (362)
T TIGR03258 228 DAPADGF 234 (362)
T ss_pred hCcCcHH
Confidence 8876665
No 193
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=9.9e-39 Score=380.64 Aligned_cols=217 Identities=23% Similarity=0.420 Sum_probs=192.4
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
..++++|++++|.. ..+|+|+||++++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++...+.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 35999999999964 3589999999999999999999999999999999999999999999999999887654 5789
Q ss_pred EEEccCCCCCcc-cHHHhcCcC-C--CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPL-E--QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~-~--~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
++++|++.+|.. ||++|+... . ..+ ++++.++++.+++.++..+.| ..||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999976 999999632 1 222 345678888899887766555 369999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNS 1446 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~ 1446 (1470)
||+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+.+.+.. ||+|++|++|++++.|+|+++++++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999988653 7899999999999865 99999999999999999999998877
Q ss_pred ChH
Q 000475 1447 SSF 1449 (1470)
Q Consensus 1447 s~f 1449 (1470)
..|
T Consensus 238 ~~~ 240 (375)
T PRK09452 238 NLF 240 (375)
T ss_pred cHH
Confidence 655
No 194
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.8e-39 Score=360.56 Aligned_cols=202 Identities=28% Similarity=0.408 Sum_probs=174.0
Q ss_pred EEEEeEEEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH----H
Q 000475 1220 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD----L 1293 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~--~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~----L 1293 (1470)
|+++|++++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999996531 46999999999999999999999999999999999999999999999999998876433 4
Q ss_pred hcccEEEccCCCCCcc-cHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000475 1294 RSRLSIIPQDPMLFQG-TVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1365 (1470)
Q Consensus 1294 R~~isiIpQdp~LF~g-TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl 1365 (1470)
|++++|+||+|.+|.+ |+++|+... ... .++++.++++..++.+.... ...+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNH-----------YPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhc-----------ChhhcCHHHHHHH
Confidence 6789999999999987 999998642 111 13456777887777554332 2357999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEE
Q 000475 1366 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKV 1432 (1470)
Q Consensus 1366 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~~DrIlvL~~G~v 1432 (1470)
+|||||+++|+||+|||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998654 7999999999999888999999999974
No 195
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-39 Score=364.96 Aligned_cols=224 Identities=25% Similarity=0.442 Sum_probs=190.9
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCCC--CHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMI--GLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1291 (1470)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999963 3599999999999999999999999999999999999974 899999999998753 345
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcC----CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPL----EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
.+|++++++||+|.+|..|+++|+... +.. .++++.++++..++.+.+.. .......+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq~q 153 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKS-------ELNKPGTRLSGGQQQ 153 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHH-------HHhCChhhcCHHHHH
Confidence 678999999999999999999999632 111 23346777888887654422 123445679999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|++||||++++|+||+|||||++||..+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999999987778999999999998765 9999999999999999999998
Q ss_pred hcCCChHHH
Q 000475 1443 EDNSSSFSK 1451 (1470)
Q Consensus 1443 ~~~~s~f~~ 1451 (1470)
+++...|.+
T Consensus 234 ~~~~~~~~~ 242 (250)
T PRK14262 234 ERPKNKLTE 242 (250)
T ss_pred hCCCChHHH
Confidence 765444443
No 196
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-39 Score=372.92 Aligned_cols=215 Identities=28% Similarity=0.402 Sum_probs=183.8
Q ss_pred EEEEeEEEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCC----CCHHH
Q 000475 1220 IELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM----IGLQD 1292 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~---~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~----i~l~~ 1292 (1470)
|+++|++++|+... .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996432 359999999999999999999999999999999999999999999999999963 34667
Q ss_pred HhcccEEEccCC--CCCcccHHHhcCcC---CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1293 LRSRLSIIPQDP--MLFQGTVRTNLDPL---EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1293 LR~~isiIpQdp--~LF~gTIR~NLdp~---~~~sd~----eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
.|++++|+||+| .+|+.|+++|+... ...+.+ .+.++++.++|.+.+ .+. ....|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~------~~~----~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL------LAR----SPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh------hhC----CcccCCHHHHH
Confidence 889999999998 68888999999632 112332 456677777774221 122 33579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1440 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~ 1440 (1470)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|+|+++.+.. ||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999988643 7899999999999865 99999999999999999999
Q ss_pred Hhhc
Q 000475 1441 LLED 1444 (1470)
Q Consensus 1441 Ll~~ 1444 (1470)
+.++
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 8754
No 197
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.1e-38 Score=364.74 Aligned_cols=217 Identities=23% Similarity=0.411 Sum_probs=187.1
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCC----------
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG---------- 1289 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~---------- 1289 (1470)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 579999999964 35999999999999999999999999999999999999999999999999997653
Q ss_pred ---HHHHhcccEEEccCCCCCc-ccHHHhcCcC----CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCC
Q 000475 1290 ---LQDLRSRLSIIPQDPMLFQ-GTVRTNLDPL----EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENW 1357 (1470)
Q Consensus 1290 ---l~~LR~~isiIpQdp~LF~-gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nL 1357 (1470)
...+|++++++||++.+|. .|+++|+... ... .++++.++++..++.+..... ...|
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~L 147 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHM-----------PAQL 147 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcC-----------hhhc
Confidence 2467889999999998885 6999999631 111 234567788888876654433 3569
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000475 1358 SVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLE 1434 (1470)
Q Consensus 1358 SgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE 1434 (1470)
|+|||||++|||||+++|++|+|||||++||+.+...+.+.|++..+ ++|+|+|+|+++.+.+ ||++++|++|++++
T Consensus 148 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 227 (252)
T TIGR03005 148 SGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVE 227 (252)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998653 7899999999999965 99999999999999
Q ss_pred ecChhHHhhcCCChH
Q 000475 1435 YDSPRQLLEDNSSSF 1449 (1470)
Q Consensus 1435 ~g~p~~Ll~~~~s~f 1449 (1470)
.|+++++.+++...+
T Consensus 228 ~g~~~~~~~~~~~~~ 242 (252)
T TIGR03005 228 QGKPDEIFRQPKEER 242 (252)
T ss_pred eCCHHHHhcCCCcHH
Confidence 999999987654334
No 198
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-39 Score=373.28 Aligned_cols=215 Identities=24% Similarity=0.348 Sum_probs=183.4
Q ss_pred cEEEEeEEEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCC--------
Q 000475 1219 KIELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM-------- 1287 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~---~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~-------- 1287 (1470)
.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 378999999996532 259999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CCHHHHhcccEEEccCC--CCCcccHHHhcCcCC---CCC----HHHHHHHHHHcCcH-HHHHh
Q 000475 1288 ----------------IGLQDLRSRLSIIPQDP--MLFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLA-EIVRQ 1341 (1470)
Q Consensus 1288 ----------------i~l~~LR~~isiIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~-~~v~~ 1341 (1470)
.....+|++++|+||+| .+|..|+++|+.... ..+ ++++.++++.++|. ++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~- 160 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ- 160 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh-
Confidence 13467889999999986 688889999996321 223 33467778888774 3322
Q ss_pred cccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh
Q 000475 1342 DQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID 1420 (1470)
Q Consensus 1342 lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~ 1420 (1470)
....+||||||||++|||||+.+|++|+|||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+..
T Consensus 161 ----------~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 161 ----------RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLE 230 (305)
T ss_pred ----------CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHH
Confidence 2335799999999999999999999999999999999999999999998753 47999999999998755
Q ss_pred -cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1421 -NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1421 -~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
||||++|++|++++.|+|+++.++
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999998864
No 199
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.6e-39 Score=355.67 Aligned_cols=198 Identities=26% Similarity=0.410 Sum_probs=173.4
Q ss_pred EEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEE
Q 000475 1221 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSII 1300 (1470)
Q Consensus 1221 ~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiI 1300 (1470)
+++|++++|+.+ .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999642 459999999999999999999999999999999999999999999999999864 4577899999
Q ss_pred ccCC--CCCcccHHHhcCcCC---CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCC
Q 000475 1301 PQDP--MLFQGTVRTNLDPLE---QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1375 (1470)
Q Consensus 1301 pQdp--~LF~gTIR~NLdp~~---~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1375 (1470)
||+| .+|..|+++|+.... ...++++.++++.+++.++....| ..||||||||++|||||+++|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhCC
Confidence 9998 467889999997431 123457889999999876644333 369999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000475 1376 RILVLDEATASIDTATDNVIQQTIREE-TSRCTVITVAHRIPTVID-NDLVLVLDEGKVL 1433 (1470)
Q Consensus 1376 ~ILlLDEaTsslD~~Td~~Iq~~I~~~-~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vv 1433 (1470)
++|+|||||++||+++.+.+.+.|++. .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 999999999999999999999999886 357899999999999976 9999999999975
No 200
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-39 Score=365.39 Aligned_cols=220 Identities=25% Similarity=0.407 Sum_probs=187.7
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC--C---CCcEEEEcCEeCCCC--CHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE--P---SGGRILIDGVDISMI--GLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~--p---~~G~I~IDG~dI~~i--~l~ 1291 (1470)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ | ++|+|.+||.++... ...
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 4899999999964 359999999999999999999999999999999999953 6 499999999999753 345
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcC----CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPL----EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
.+|++++|+||+|.+|+.|+++|+... +.. .++++.++++.+++.+.+.. .......+||+||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 155 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKD-------RLHDSALGLSGGQQQ 155 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHH-------HHhcCcccCCHHHHH
Confidence 678899999999999999999998631 111 23456677888887554332 123344679999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|++|||||+++|++|||||||++||+++...+.+.|++..+++|||+|+|+++.+.. ||||++|++|++++.|++++++
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999865 9999999999999999999998
Q ss_pred hcCCC
Q 000475 1443 EDNSS 1447 (1470)
Q Consensus 1443 ~~~~s 1447 (1470)
+++..
T Consensus 236 ~~~~~ 240 (252)
T PRK14239 236 MNPKH 240 (252)
T ss_pred hCCCC
Confidence 76543
No 201
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=6e-39 Score=325.87 Aligned_cols=211 Identities=28% Similarity=0.429 Sum_probs=187.1
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|.+++|.++|.. .| -..+++|++||+|||+|+||||||||++++.|+..|.+|+|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~-~~---~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGH-LP---MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCc-ce---EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 567899999963 33 357899999999999999999999999999999999999999999999876654 578999
Q ss_pred EccCCCCCcc-cHHHhcCcC----C---CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQG-TVRTNLDPL----E---QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp~----~---~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+.||.-||.. ||++|+... - ....+.+.+++.++||.++..++|+ .||||||||++|||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHH
Confidence 9999999987 999998642 2 2335568999999999999999985 5899999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSS 1447 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s 1447 (1470)
+|+.+||+||||.|+||+.-.+.+...+.+.. ++.|+++|||.++.+.. +||++++++|||++.|+.+++++.+++
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~~ 223 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKAS 223 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCCh
Confidence 99999999999999999999999988887654 57899999999999876 999999999999999999999976543
No 202
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=365.26 Aligned_cols=222 Identities=21% Similarity=0.381 Sum_probs=188.9
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC--C---CCcEEEEcCEeCCC--CCHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE--P---SGGRILIDGVDISM--IGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~--p---~~G~I~IDG~dI~~--i~l~ 1291 (1470)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 5899999999964 359999999999999999999999999999999999987 3 58999999999864 4456
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcC----CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPL----EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~----~~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
.+|++++|+||+|.+|.+|+++|+... +..++ +++.++++..++.+.+.. .++ ....+||+||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~l~----~~~~~LS~Gq~q 162 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKD---RLH----TQALSLSGGQQQ 162 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh---hhh----CCcccCCHHHHH
Confidence 788999999999999999999999532 11122 235566777777654321 123 345679999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|++|||||+++|+||+|||||++||+++...+.+.|++..+++|+|+|+|+++.+.. ||||++|++|++++.|+|++++
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999987778999999999999876 9999999999999999999998
Q ss_pred hcCCChH
Q 000475 1443 EDNSSSF 1449 (1470)
Q Consensus 1443 ~~~~s~f 1449 (1470)
+++...+
T Consensus 243 ~~~~~~~ 249 (259)
T PRK14274 243 SNPDDQR 249 (259)
T ss_pred hCCCCHH
Confidence 7655443
No 203
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=368.50 Aligned_cols=215 Identities=23% Similarity=0.412 Sum_probs=189.5
Q ss_pred cEEEEeEEEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1219 KIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
-|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743 24599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEccCC--CCCcccHHHhcCcC---CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1298 SIIPQDP--MLFQGTVRTNLDPL---EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1298 siIpQdp--~LF~gTIR~NLdp~---~~~sd~----eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
+|+||+| .++..|+.+|+... ...+++ ++.++++.+++.++.... ...||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTRE-----------PARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 47788999999632 123333 356788888887654332 246999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
|||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|++++.|++++++++
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999987653 7899999999999988999999999999999999998864
No 204
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.8e-39 Score=347.35 Aligned_cols=221 Identities=27% Similarity=0.400 Sum_probs=185.6
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.+++++++.+|.. ..||+|+||+|++||.|+|+||||||||||++++.|+..|++|+|.+||.++... ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 4889999999976 4699999999999999999999999999999999999999999999999988443 45799
Q ss_pred EEccCCCCCcc-cHHHhcCcC-CC------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1299 IIPQDPMLFQG-TVRTNLDPL-EQ------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp~-~~------~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
||+|++.||.- ||++|+... .. -..+.+.+.|+++||.+|-...|. .||||||||++||||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiARA 144 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIARA 144 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHHH
Confidence 99999999998 999998632 11 124468899999999999877774 589999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeC--CEE---EEecChhHHh
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDE--GKV---LEYDSPRQLL 1442 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~--G~v---vE~g~p~~Ll 1442 (1470)
|+.+|+||+||||.++||..|...+|+-+.+.- .++||++|||+++.... +|||+||.+ |+| ++.+-|..-
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~~~~~i~l~rpR- 223 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIGEELEIDLPRPR- 223 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcceeeEEecCCCCCc-
Confidence 999999999999999999999999999887643 46999999999998655 999999999 545 333332111
Q ss_pred hcCCChHHHHHHHHHh
Q 000475 1443 EDNSSSFSKLVAEFLR 1458 (1470)
Q Consensus 1443 ~~~~s~f~~lv~~~~~ 1458 (1470)
...+..|..+.++-+.
T Consensus 224 ~~~~~~f~~l~~~i~~ 239 (248)
T COG1116 224 IRGDPEFLELREELLE 239 (248)
T ss_pred cccChHHHHHHHHHHH
Confidence 2345568777766654
No 205
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=364.25 Aligned_cols=223 Identities=24% Similarity=0.430 Sum_probs=192.9
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEEcCEeCCC--CCHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1291 (1470)
.++++||+++|++ .++|+|+||+|++||.+||+|++|||||||+++|+|+.+ |++|+|.+||.+++. .+..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 3789999999964 359999999999999999999999999999999999875 389999999999975 3466
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcC-C--C-CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPL-E--Q-HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~-~--~-~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
++|++++|+||+|.+|.+|+++|+... . . .+ ++++.++++.+++.+.+... +| ..+.+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~~----~~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK---LD----KSALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH---Hh----CCcccCCHHHHH
Confidence 789999999999999999999999732 1 1 12 23467788889987765432 33 345679999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|+||||||+++|+||+|||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778999999999999877 8999999999999999999998
Q ss_pred hcCCChHH
Q 000475 1443 EDNSSSFS 1450 (1470)
Q Consensus 1443 ~~~~s~f~ 1450 (1470)
+.+.+.+.
T Consensus 234 ~~~~~~~~ 241 (250)
T PRK14266 234 INPKDKRT 241 (250)
T ss_pred hCCCChHH
Confidence 77666553
No 206
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-38 Score=363.56 Aligned_cols=224 Identities=24% Similarity=0.430 Sum_probs=191.1
Q ss_pred CCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC--C---CCcEEEEcCEeCCCC--C
Q 000475 1217 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE--P---SGGRILIDGVDISMI--G 1289 (1470)
Q Consensus 1217 ~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~--p---~~G~I~IDG~dI~~i--~ 1289 (1470)
+|.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 467999999999963 359999999999999999999999999999999999986 4 689999999999753 3
Q ss_pred HHHHhcccEEEccCCCCCc-ccHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChh
Q 000475 1290 LQDLRSRLSIIPQDPMLFQ-GTVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVG 1360 (1470)
Q Consensus 1290 l~~LR~~isiIpQdp~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgG 1360 (1470)
...+|++++|+||++.+|. .|+++|+... +..+ ++++.++++.+++.+.+..+ ++ ..+.+||+|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~---~~----~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDR---LK----SNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHH---hh----CCcCcCCHH
Confidence 4568899999999999998 5999999631 1112 24467778888876544321 12 345679999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChh
Q 000475 1361 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPR 1439 (1470)
Q Consensus 1361 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~ 1439 (1470)
||||++||||++++|++|+|||||++||+.+...+.+.|++..++.|||++||+++.+.. ||++++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988777899999999999865 9999999999999999999
Q ss_pred HHhhcCCChH
Q 000475 1440 QLLEDNSSSF 1449 (1470)
Q Consensus 1440 ~Ll~~~~s~f 1449 (1470)
++..++...+
T Consensus 233 ~~~~~~~~~~ 242 (252)
T PRK14256 233 KIFTTPEKKQ 242 (252)
T ss_pred HHHhCCCcHH
Confidence 9987655444
No 207
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=368.14 Aligned_cols=213 Identities=27% Similarity=0.431 Sum_probs=186.0
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCC-HHHHhcccE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG-LQDLRSRLS 1298 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~-l~~LR~~is 1298 (1470)
++++|++++|+++ +.+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 6899999999643 35999999999999999999999999999999999999999999999999998765 467889999
Q ss_pred EEccCCC--CCcccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1299 IIPQDPM--LFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1299 iIpQdp~--LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
++||+|. ++..|+++|+.... ..+ ++++.++++.+++.++.... ...||+|||||++|||
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qrv~lar 149 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRS-----------PKTLSGGQGQCVALAG 149 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCC-----------cccCCHHHHHHHHHHH
Confidence 9999985 56789999996421 122 34567778888886654332 2469999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
||+++|+||+|||||++||+.+...+.+.|++.. +++|||++||+++.+..||+|++|++|++++.|+++++...
T Consensus 150 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 150 ILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999998754 47999999999999988999999999999999999998754
No 208
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.7e-38 Score=364.78 Aligned_cols=221 Identities=25% Similarity=0.354 Sum_probs=195.7
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.|+++|++++|+.. ..+.+++ ||+|++||+++|+|+||||||||+++|.|+++ .+|++ .++|
T Consensus 2 ~i~~~nls~~~~~~------~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I-~i~g~~i~~~~~~ 73 (275)
T cd03289 2 QMTVKDLTAKYTEG------GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDI-QIDGVSWNSVPLQ 73 (275)
T ss_pred eEEEEEEEEEeCCC------CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEE-EECCEEhhhCCHH
Confidence 48899999999743 2457899 99999999999999999999999999999998 78986 7776
Q ss_pred ----EeEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHH
Q 000475 660 ----KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAV 735 (1470)
Q Consensus 660 ----~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 735 (1470)
.++||||+|+++++|+++|+....+.+.++..++++.+++...+..+|++.++.+++.|.+||||||||++||||+
T Consensus 74 ~lr~~i~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRal 153 (275)
T cd03289 74 KWRKAFGVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSV 153 (275)
T ss_pred HHhhhEEEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHH
Confidence 3799999999999999999964444667788889999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHHhhchhHHH
Q 000475 736 YSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQNSELV 815 (1470)
Q Consensus 736 ~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 815 (1470)
+.+|+|+||||||++||+++.+.+.+ .+....+++|+|+|||+++++..||+|++|++|++++.|+++++.+ ....+.
T Consensus 154 l~~p~illlDEpts~LD~~~~~~l~~-~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~-~~~~~~ 231 (275)
T cd03289 154 LSKAKILLLDEPSAHLDPITYQVIRK-TLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLN-EKSHFK 231 (275)
T ss_pred hcCCCEEEEECccccCCHHHHHHHHH-HHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhh-CcHHHH
Confidence 99999999999999999999776654 4555556899999999999988899999999999999999999988 455566
Q ss_pred HHHHH
Q 000475 816 RQMKA 820 (1470)
Q Consensus 816 ~~~~~ 820 (1470)
+++..
T Consensus 232 ~~~~~ 236 (275)
T cd03289 232 QAISP 236 (275)
T ss_pred HHHhh
Confidence 65543
No 209
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.7e-38 Score=366.16 Aligned_cols=223 Identities=22% Similarity=0.341 Sum_probs=189.1
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHH---HHhc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ---DLRS 1295 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR~ 1295 (1470)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5899999999963 3599999999999999999999999999999999999999999999999999876643 3578
Q ss_pred ccEEEccCCCCCcc-cHHHhcCc----CCCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000475 1296 RLSIIPQDPMLFQG-TVRTNLDP----LEQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1296 ~isiIpQdp~LF~g-TIR~NLdp----~~~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
+++|+||++.+|.+ |+++|+.. ....+. +.+.++++.+++.+.. +..+ .+||||||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~~~~----~~LSgGq~qrv~ 153 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAA-------KLMP----SELSGGMARRAA 153 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhh-------hCCh----hhCCHHHHHHHH
Confidence 89999999999987 99999963 111222 3456677777775433 2222 469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
|||||+++|++|+|||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|+++++++
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999999864 37899999999999876 99999999999999999999987
Q ss_pred cCCChHHHHHH
Q 000475 1444 DNSSSFSKLVA 1454 (1470)
Q Consensus 1444 ~~~s~f~~lv~ 1454 (1470)
++......++.
T Consensus 234 ~~~~~~~~~~~ 244 (269)
T PRK11831 234 NPDPRVRQFLD 244 (269)
T ss_pred CCcHHHHHHHH
Confidence 55444444443
No 210
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-39 Score=348.93 Aligned_cols=188 Identities=32% Similarity=0.447 Sum_probs=160.0
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------E
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------K 660 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------~ 660 (1470)
.+++++++.+|.. ...|+| ||+|++||+++|+|||||||||||++|+|+.+|++|++ .++| .
T Consensus 3 ~l~i~~v~~~f~~--------~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V-~~~g~~v~~p~~~ 73 (248)
T COG1116 3 LLEIEGVSKSFGG--------VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEV-LLDGRPVTGPGPD 73 (248)
T ss_pred eEEEEeeEEEeCc--------eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCcccCCCCCC
Confidence 4788999999874 468899 99999999999999999999999999999999999997 7776 4
Q ss_pred eEEEcCCCCCCC-ccHHHHHhcCCCCC-------HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHH
Q 000475 661 KAYVPQSSWIQT-GTIRENILFGKDMR-------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLA 732 (1470)
Q Consensus 661 ~ayv~Q~~~i~~-~Ti~eNI~~g~~~~-------~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 732 (1470)
++||+|++-++. .||+|||.||.+.. +++.++.++..+|...-+ ..+.+|||||||||+||
T Consensus 74 ~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~-----------~~P~qLSGGMrQRVaiA 142 (248)
T COG1116 74 IGYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFED-----------KYPHQLSGGMRQRVAIA 142 (248)
T ss_pred EEEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhh-----------cCccccChHHHHHHHHH
Confidence 699999987755 79999999997652 234556666677655443 44578999999999999
Q ss_pred HHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEcCCcchhh-hcCEEEEEeC--CEE
Q 000475 733 RAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLS-QKTVLYTTHQLEFLD-AADLVLVMKD--GKI 797 (1470)
Q Consensus 733 RAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~--G~i 797 (1470)
|||..+|+++||||||+|||+.|+.++.+.+.+-+.+ ++||++||||+++.- -+|||++|.+ |+|
T Consensus 143 RAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 143 RALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999998887776655543 799999999999865 5999999998 445
No 211
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=9.7e-39 Score=363.09 Aligned_cols=211 Identities=25% Similarity=0.364 Sum_probs=184.3
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHH-hcccE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL-RSRLS 1298 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~is 1298 (1470)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |.+++
T Consensus 3 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 3 LYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred EEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 789999999964 359999999999999999999999999999999999999999999999999988876654 56799
Q ss_pred EEccCCCCCcc-cHHHhcCcCCC------------C---CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000475 1299 IIPQDPMLFQG-TVRTNLDPLEQ------------H---SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1362 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp~~~------------~---sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQr 1362 (1470)
++||++.+|.+ |+++|++.... . .++++.++++..++.+.. + ....+||||||
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~LS~Ge~ 149 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEA-------D----RLAGLLSHGQK 149 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhh-------c----CChhhCCHHHH
Confidence 99999999987 99999964211 0 233466677776664332 2 33457999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000475 1363 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1441 (1470)
Q Consensus 1363 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~L 1441 (1470)
||++||||++++|++|+|||||++||+++...+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 150 qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~ 229 (242)
T TIGR03411 150 QWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQV 229 (242)
T ss_pred HHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHH
Confidence 9999999999999999999999999999999999999987677999999999999976 999999999999999999998
Q ss_pred hh
Q 000475 1442 LE 1443 (1470)
Q Consensus 1442 l~ 1443 (1470)
.+
T Consensus 230 ~~ 231 (242)
T TIGR03411 230 QA 231 (242)
T ss_pred hc
Confidence 74
No 212
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-39 Score=356.55 Aligned_cols=202 Identities=30% Similarity=0.438 Sum_probs=178.6
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+. .++++|+||++++| ++||+|+||||||||+++|.|+++|++|+|.++|.++...+ ..+|+++++
T Consensus 1 i~~~~~~~~~~~--~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK--KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC--EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 578999999964 35999999999999 99999999999999999999999999999999999998776 778999999
Q ss_pred EccCCCCCcc-cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQG-TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||+|.+|.+ |+++|+... ...+ ++++.++++.+++.++. |+.+ .+||+|||||++|||||
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRA-------KKKI----GSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHH-------hCch----hhCCHHHHHHHHHHHHH
Confidence 9999999986 999998631 1122 34577888888887653 3333 46999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
+++|++|+|||||++||+.+.+.+.+.|++..+++|||+|+|+++.+.. |||+++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999987777999999999999975 9999999999998865
No 213
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-38 Score=362.38 Aligned_cols=223 Identities=25% Similarity=0.408 Sum_probs=189.9
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCC--CCH
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISM--IGL 1290 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~l 1290 (1470)
|.|+++||+++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 57999999999964 3599999999999999999999999999999999999863 69999999999975 455
Q ss_pred HHHhcccEEEccCCCCCcccHHHhcCcCC---C-C----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000475 1291 QDLRSRLSIIPQDPMLFQGTVRTNLDPLE---Q-H----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1362 (1470)
Q Consensus 1291 ~~LR~~isiIpQdp~LF~gTIR~NLdp~~---~-~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQr 1362 (1470)
..+|++++|+||+|.+|..|+++|+.... . . .++++.++++.+++.+.+.. .......+||+|||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKD-------RLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHH-------HHhcCCCCCCHHHH
Confidence 67899999999999999999999996321 1 1 23456677777777544321 12234467999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000475 1363 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1441 (1470)
Q Consensus 1363 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~L 1441 (1470)
||++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987668999999999998866 999999999999999999999
Q ss_pred hhcCCChH
Q 000475 1442 LEDNSSSF 1449 (1470)
Q Consensus 1442 l~~~~s~f 1449 (1470)
..++...+
T Consensus 233 ~~~~~~~~ 240 (250)
T PRK14240 233 FTNPKDKR 240 (250)
T ss_pred HhCCCChH
Confidence 86654433
No 214
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=9.6e-39 Score=354.67 Aligned_cols=202 Identities=23% Similarity=0.381 Sum_probs=178.7
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++... .++|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 578999999953 3699999999999999999999999999999999999999999999999998764 567889999
Q ss_pred EccCCCCC-cccHHHhcCcC---CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCC
Q 000475 1300 IPQDPMLF-QGTVRTNLDPL---EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1375 (1470)
Q Consensus 1300 IpQdp~LF-~gTIR~NLdp~---~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1375 (1470)
+||++.+| +.|+++|+... ...+++++.++++..++.+..... ...||+|||||++||||++++|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKK-----------VKGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhh-----------HhhCCHHHHHHHHHHHHHhcCC
Confidence 99999887 46999999642 123567788899999987765432 2469999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1376 RILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1376 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
++|+|||||++||+.+.+.+.+.|++.. .++|+|+++|+++.+.. ||+|++|++|++++.|
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999998754 47899999999999876 9999999999998865
No 215
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=365.18 Aligned_cols=222 Identities=24% Similarity=0.397 Sum_probs=190.1
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCC--CCH
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISM--IGL 1290 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~l 1290 (1470)
+.++++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. ...
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 46999999999964 3599999999999999999999999999999999999985 48999999999864 445
Q ss_pred HHHhcccEEEccCCCCCcccHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000475 1291 QDLRSRLSIIPQDPMLFQGTVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1362 (1470)
Q Consensus 1291 ~~LR~~isiIpQdp~LF~gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQr 1362 (1470)
..+|++++++||+|.+|+.|+++|+... +... ++.+.++++.+++.+.+... ++ ..+..||+|||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~~----~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDK---LN----KSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhH---hc----CCcccCCHHHH
Confidence 6788999999999999999999999632 1112 23456788888886554322 23 34467999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEe-----CCEEEEec
Q 000475 1363 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLD-----EGKVLEYD 1436 (1470)
Q Consensus 1363 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~-----~G~vvE~g 1436 (1470)
||++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999987777999999999999976 99999998 59999999
Q ss_pred ChhHHhhcCCCh
Q 000475 1437 SPRQLLEDNSSS 1448 (1470)
Q Consensus 1437 ~p~~Ll~~~~s~ 1448 (1470)
++.++++++...
T Consensus 237 ~~~~~~~~~~~~ 248 (259)
T PRK14260 237 VTTQIFSNPLDS 248 (259)
T ss_pred CHHHHhcCCCCh
Confidence 999998765443
No 216
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=362.23 Aligned_cols=219 Identities=26% Similarity=0.425 Sum_probs=188.8
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCC-----CcEEEEcCEeCCCC--CHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS-----GGRILIDGVDISMI--GLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~-----~G~I~IDG~dI~~i--~l~ 1291 (1470)
.|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 5899999999963 35999999999999999999999999999999999999987 69999999998753 456
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcCC---C-CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPLE---Q-HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~~---~-~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
.+|++++|+||+|.+|.+|+++|+.... . .. ++.+.++++..++.+.+.. .....+.+||+||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKD-------NLHKSGLALSGGQQQ 154 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhh-------HhhCCcccCCHHHHH
Confidence 7899999999999999999999996421 1 11 2345566777777654432 233456789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999977 7999999999999999999998
Q ss_pred hcCC
Q 000475 1443 EDNS 1446 (1470)
Q Consensus 1443 ~~~~ 1446 (1470)
.++.
T Consensus 235 ~~~~ 238 (251)
T PRK14249 235 SRPR 238 (251)
T ss_pred hCCC
Confidence 6554
No 217
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-39 Score=343.91 Aligned_cols=210 Identities=27% Similarity=0.381 Sum_probs=174.3
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
|+++|+++.|.+ ...+++ ||+|++||+++++||+||||||+|++|.++++|++|++ .++|
T Consensus 2 I~~~nvsk~y~~--------~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I-~i~g~~i~~~d~~~ 72 (309)
T COG1125 2 IEFENVSKRYGN--------KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEI-LIDGEDISDLDPVE 72 (309)
T ss_pred ceeeeeehhcCC--------ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceE-EECCeecccCCHHH
Confidence 789999999974 356778 99999999999999999999999999999999999996 8877
Q ss_pred ---EeEEEcCCCCCC-CccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHH
Q 000475 660 ---KKAYVPQSSWIQ-TGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQR 728 (1470)
Q Consensus 660 ---~~ayv~Q~~~i~-~~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 728 (1470)
++|||-|+.-+| +.||.|||.+-.. +++ ++.++.++..+|+.. ......+..|||||+||
T Consensus 73 LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~---------~~~~RyP~eLSGGQQQR 143 (309)
T COG1125 73 LRRKIGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPS---------EYADRYPHELSGGQQQR 143 (309)
T ss_pred HHHhhhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHH---------HHhhcCchhcCcchhhH
Confidence 369999998775 6799999997532 333 344555666666531 01235577999999999
Q ss_pred HHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchh-hhcCEEEEEeCCEEEEecChhhH
Q 000475 729 IQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFL-DAADLVLVMKDGKIEQSGKYEDL 806 (1470)
Q Consensus 729 v~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l 806 (1470)
|.+||||..+|+|+|+||||+||||-++.++-++...-.. -++|+|+||||+++. ..+|+|.+|++|+|++.++++++
T Consensus 144 VGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~i 223 (309)
T COG1125 144 VGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEI 223 (309)
T ss_pred HHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHH
Confidence 9999999999999999999999999999888665543222 289999999999985 56999999999999999999999
Q ss_pred HhhchhHHHHHH
Q 000475 807 IADQNSELVRQM 818 (1470)
Q Consensus 807 ~~~~~~~~~~~~ 818 (1470)
+.++..+|.+..
T Consensus 224 l~~Pan~FV~~f 235 (309)
T COG1125 224 LANPANDFVEDF 235 (309)
T ss_pred HhCccHHHHHHH
Confidence 987777776543
No 218
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=368.52 Aligned_cols=215 Identities=25% Similarity=0.419 Sum_probs=188.9
Q ss_pred cEEEEeEEEEeCCC----CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCC-HHHH
Q 000475 1219 KIELENLLVQYNPT----LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG-LQDL 1293 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~----~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~-l~~L 1293 (1470)
-++++|++++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 48999999999642 246999999999999999999999999999999999999999999999999997654 4568
Q ss_pred hcccEEEccCCC--CCcccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1294 RSRLSIIPQDPM--LFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1294 R~~isiIpQdp~--LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
|++++|+||+|. +|..|+++|+.... ..+ ++++.++++.+++.++..+.| .+||+|||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 67678999996421 122 456788899999987665443 4699999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHh
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
++|||||+++|++|||||||++||+.+...+.+.|++.. .++|||+++|+++.+..||+|++|++|++++.|+|+++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999864 379999999999999889999999999999999999987
Q ss_pred hc
Q 000475 1443 ED 1444 (1470)
Q Consensus 1443 ~~ 1444 (1470)
.+
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 64
No 219
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=7.5e-36 Score=361.80 Aligned_cols=479 Identities=20% Similarity=0.186 Sum_probs=321.3
Q ss_pred chhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChh------hHHHHHhhchhhhhcch
Q 000475 928 QLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSS------RILNRCSTDQSTVDTDI 1001 (1470)
Q Consensus 928 ~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G------~ilnR~s~D~~~id~~l 1001 (1470)
..+.+|..++++.......+.++......+.-..+-..++++-+... .||-....| ..=.|+..|+...-..-
T Consensus 87 ~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~-~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t 165 (604)
T COG4178 87 QQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPR-RYYRLAQAGGIGLIDNPDQRIQEDIRNFTETT 165 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHhcccccCCCChHHhHHHHHHHHHhhH
Confidence 45677888888888888888888888888888888888888887766 444333332 23356777776655544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHH------HHHHHHHHH-HHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhh
Q 000475 1002 PYRLAGLAFALIQLLSIIILMSQAAWQVFP------LFLVILGIS-IWYQVVNTARCHYLLQAYYITTARELARMVGTRK 1074 (1470)
Q Consensus 1002 ~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~------~~ip~~~~~-~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~ 1074 (1470)
-....+++.++++++...+++.-.+-.+.+ +.+|-..+. ..+.++.......++.+...+-.-+-.+.|+.-|
T Consensus 166 ~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR 245 (604)
T COG4178 166 LDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFR 245 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHH
Confidence 444445555555555444443311111100 011111100 0000000000111222444444445555565555
Q ss_pred chhHHHHHHhhhhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH-HHHHHhhcCCCcC
Q 000475 1075 APILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLV-LIILVTLPRSAID 1153 (1470)
Q Consensus 1075 sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~-~~~~~~~~~~~~~ 1153 (1470)
..+. -.-+....|-.|+-|+.-.++..+..+.-.+.+......+.++...-...+-+.+.+- .+.+-....|.++
T Consensus 246 ~~Lv----rv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~ 321 (604)
T COG4178 246 YSLV----RVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQIT 321 (604)
T ss_pred HHHH----HHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcCh
Confidence 4433 2344566777787776665555555554444444333333333333222222221111 1111123456777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhc------CCCCCccccCCCCCCCCCCCCCcEEEEeEEE
Q 000475 1154 PSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTN------IPSEAPLVIKNSRPSPEWPSSGKIELENLLV 1227 (1470)
Q Consensus 1154 ~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~------~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~ 1227 (1470)
-|-...+.+-..++...+.|++..+..+.+-.....|+.++.+ .+.+.+.... .+-...-.....|+++|+++
T Consensus 322 ~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~nl~l 400 (604)
T COG4178 322 FGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTG-RRIDFDDNADHGITLENLSL 400 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCccc-ccccccccccceeEEeeeeE
Confidence 7777777777888889999999999999999999999999874 1222111100 00000000146899999999
Q ss_pred EeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCC
Q 000475 1228 QYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLF 1307 (1470)
Q Consensus 1228 ~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF 1307 (1470)
.-+++. ..+++++|++++||.+-|.|+||||||||+++|.|+.+--+|+|.+-. -+++-++||.|.+-
T Consensus 401 ~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p 468 (604)
T COG4178 401 RTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLP 468 (604)
T ss_pred ECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCC
Confidence 987665 689999999999999999999999999999999999999999987641 13588999999999
Q ss_pred cccHHHhcC-cCC--CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccC
Q 000475 1308 QGTVRTNLD-PLE--QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEAT 1384 (1470)
Q Consensus 1308 ~gTIR~NLd-p~~--~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaT 1384 (1470)
.||+|+-|. |.. .++|+|+.++|.+|||.+++.++.+- +. =..-||+||||||++||.||+||++++|||||
T Consensus 469 ~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~-~~----W~~vLS~GEqQRlafARilL~kP~~v~LDEAT 543 (604)
T COG4178 469 QGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEE-DR----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEAT 543 (604)
T ss_pred CccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhcc-Cc----HhhhcChhHHHHHHHHHHHHcCCCEEEEecch
Confidence 999999996 543 38999999999999999999987432 22 23469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeC
Q 000475 1385 ASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDE 1429 (1470)
Q Consensus 1385 sslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~ 1429 (1470)
|+||++++..+.+.++++..++|||.|+||.....-.++.+-+++
T Consensus 544 sALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 544 SALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred hccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 999999999999999999999999999999777666666665543
No 220
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=367.81 Aligned_cols=215 Identities=24% Similarity=0.423 Sum_probs=187.4
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|+...+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 58999999999754446999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEccCCC--CCcccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1299 IIPQDPM--LFQGTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1299 iIpQdp~--LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
|+||+|. ++..|+++|+... .... ++++.++++..++.++.. . ...+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~----~~~~LS~G~~qrl~lar 155 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERAD-------Y----EPNALSGGQKQRVAIAG 155 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhh-------C----CcccCCHHHHHHHHHHH
Confidence 9999994 4455899998532 1112 345667788887765432 2 23579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
|++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+..||||++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 156 VLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998643 7899999999999988999999999999999999998764
No 221
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=365.64 Aligned_cols=221 Identities=25% Similarity=0.441 Sum_probs=187.9
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEEcCEeCCC--CCHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1291 (1470)
.|+++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 5999999999964 359999999999999999999999999999999999865 789999999999975 3445
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcC----CC----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPL----EQ----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~----~~----~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
.+|++++|+||+|.+|.+|+++|+... .. ..++.+.++++.+++.+.+.. .......+|||||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~q 171 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKD-------RLHSSALSLSGGQQQ 171 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHH-------HHhcCcccCCHHHHH
Confidence 678999999999999999999998632 11 113446777877777432211 122345679999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|++|||||+++|+||+|||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 172 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 172 RLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999998865 9999999999999999999998
Q ss_pred hcCCCh
Q 000475 1443 EDNSSS 1448 (1470)
Q Consensus 1443 ~~~~s~ 1448 (1470)
+++...
T Consensus 252 ~~~~~~ 257 (268)
T PRK14248 252 TSPKQQ 257 (268)
T ss_pred hCCCCh
Confidence 765433
No 222
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=373.87 Aligned_cols=227 Identities=20% Similarity=0.350 Sum_probs=188.1
Q ss_pred cEEEEeEEEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC----CCCcEEEEcCEeCCCCCHHH
Q 000475 1219 KIELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE----PSGGRILIDGVDISMIGLQD 1292 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~--~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~----p~~G~I~IDG~dI~~i~l~~ 1292 (1470)
-++++|++++|+... ..+|+||||+|++||.+||||+||||||||+++|.|+++ |++|+|.+||.|+.+++.++
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 379999999996532 359999999999999999999999999999999999997 48999999999999998776
Q ss_pred Hhc----ccEEEccCCC--CCcc-cHHHhc----CcCCCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCC
Q 000475 1293 LRS----RLSIIPQDPM--LFQG-TVRTNL----DPLEQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENW 1357 (1470)
Q Consensus 1293 LR~----~isiIpQdp~--LF~g-TIR~NL----dp~~~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nL 1357 (1470)
+|+ ++++|||+|. ++.. |+.+|+ ...... .++++.++|++++|.+.... ++ .....|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~----l~----~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASR----LD----VYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH----Hh----CCchhC
Confidence 553 6999999995 4432 565544 322111 23457788898888542211 12 334579
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhh-hcCEEEEEeCCEEEE
Q 000475 1358 SVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVI-DNDLVLVLDEGKVLE 1434 (1470)
Q Consensus 1358 SgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~-~~DrIlvL~~G~vvE 1434 (1470)
|||||||++|||||+.+|++||+||||++||..+...|.+.|++.. .+.|+|+|||+++.+. .||||+||++|+|+|
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998864 3789999999999985 499999999999999
Q ss_pred ecChhHHhhcCCChHHHHH
Q 000475 1435 YDSPRQLLEDNSSSFSKLV 1453 (1470)
Q Consensus 1435 ~g~p~~Ll~~~~s~f~~lv 1453 (1470)
.|+++++++++...|.+..
T Consensus 235 ~g~~~~~~~~p~hpyt~~l 253 (326)
T PRK11022 235 TGKAHDIFRAPRHPYTQAL 253 (326)
T ss_pred ECCHHHHhhCCCChHHHHH
Confidence 9999999988776676543
No 223
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.8e-38 Score=354.96 Aligned_cols=210 Identities=22% Similarity=0.345 Sum_probs=187.4
Q ss_pred EEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCH----HHHhcc
Q 000475 1221 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL----QDLRSR 1296 (1470)
Q Consensus 1221 ~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l----~~LR~~ 1296 (1470)
.+.|+.++|+++ .++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 578999999765 459999999999999999999999999999999999999999999999998876542 345778
Q ss_pred cEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000475 1297 LSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1376 (1470)
Q Consensus 1297 isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1376 (1470)
++|+||+|.+|+.|+++|+.....+++++..++++.+++.+.+..+|.|+++.......+||+|||||++||||++++|+
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 160 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTN 160 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999998654456777788999999999999899999998888889999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHH--HHHHhc-CCcEEEEEecChhhhhhcCEEEEEeCCE
Q 000475 1377 ILVLDEATASIDTATDNVIQQ--TIREET-SRCTVITVAHRIPTVIDNDLVLVLDEGK 1431 (1470)
Q Consensus 1377 ILlLDEaTsslD~~Td~~Iq~--~I~~~~-~~~TVI~IAHRl~ti~~~DrIlvL~~G~ 1431 (1470)
||+|||||++||+.+.+.+.+ .++... .+.|+|++||+.+.+..||++++|++|.
T Consensus 161 illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 161 IVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred EEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999999888776 444432 3689999999999998899999999984
No 224
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.1e-38 Score=360.31 Aligned_cols=211 Identities=27% Similarity=0.480 Sum_probs=181.1
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH-HhcccE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRLS 1298 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~is 1298 (1470)
|+++|++++|+. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 578999999963 35999999999999999999999999999999999999999999999999998877665 457899
Q ss_pred EEccCCCCCcc-cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1299 IIPQDPMLFQG-TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
|+||+|.+|.+ |+++|+... .... ++++.+.++..++.+.. .....+||+|||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la~a 147 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLR-----------KSKASSLSGGERRRVEIARA 147 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHHHHHHHHH
Confidence 99999999987 999999632 1122 22345566666654332 23345799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
++++|++|+|||||++||+++.+.+.+.|++.. +++|||+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 148 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 148 LATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999999998764 47899999999988766 99999999999999999998875
No 225
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.7e-38 Score=356.14 Aligned_cols=203 Identities=27% Similarity=0.424 Sum_probs=174.5
Q ss_pred EEEEeEEEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH---Hh
Q 000475 1220 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---LR 1294 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~--~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR 1294 (1470)
|+++||+++|++.. .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996422 35999999999999999999999999999999999999999999999999998887654 34
Q ss_pred -cccEEEccCCCCCc-ccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000475 1295 -SRLSIIPQDPMLFQ-GTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1365 (1470)
Q Consensus 1295 -~~isiIpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl 1365 (1470)
++++|+||+|.+|. .|+++|+... .... ++++.++++..++.+.... ....||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINH-----------RPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHH
Confidence 68999999999986 5999999641 1222 2346677777777554332 2356999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeCCEEE
Q 000475 1366 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDEGKVL 1433 (1470)
Q Consensus 1366 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~~DrIlvL~~G~vv 1433 (1470)
+|||||+++|+||+|||||++||+++...+.+.|++.. .++|||+|+|+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999998764 378999999999999889999999999986
No 226
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=366.25 Aligned_cols=212 Identities=27% Similarity=0.405 Sum_probs=187.6
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..++|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5899999999963 35999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEccCCCCCcc-cHHHhcCcCC-----------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000475 1299 IIPQDPMLFQG-TVRTNLDPLE-----------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp~~-----------~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
|+||++.++.+ |+++|+.... ...++++.++++.+++.+..... + .+||||||||++
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~----~~LSgG~~qrv~ 157 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRL-------V----DSLSGGERQRAW 157 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-------c----ccCCHHHHHHHH
Confidence 99999877665 9999996310 11245678899999887654333 2 369999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 9999999999999999999999999999999998764 37999999999999965 99999999999999999999875
No 227
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-38 Score=365.23 Aligned_cols=221 Identities=25% Similarity=0.408 Sum_probs=191.0
Q ss_pred CCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCC--CC
Q 000475 1217 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISM--IG 1289 (1470)
Q Consensus 1217 ~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~ 1289 (1470)
.+.|+++|++++|.. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 23 ~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~ 100 (272)
T PRK14236 23 QTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD 100 (272)
T ss_pred CcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC
Confidence 457999999999964 3599999999999999999999999999999999999884 89999999999975 34
Q ss_pred HHHHhcccEEEccCCCCCcccHHHhcCcC---CC-CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000475 1290 LQDLRSRLSIIPQDPMLFQGTVRTNLDPL---EQ-HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1361 (1470)
Q Consensus 1290 l~~LR~~isiIpQdp~LF~gTIR~NLdp~---~~-~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQ 1361 (1470)
...+|++++|+||++.+|.+|+++|+... .. .. ++++.++++.+++.+.+.. .....+.+||+||
T Consensus 101 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq 173 (272)
T PRK14236 101 VAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKD-------RLHENAFGLSGGQ 173 (272)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHH-------HhhCCcccCCHHH
Confidence 56789999999999999999999999632 11 11 2447778888887654432 2234456899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000475 1362 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1440 (1470)
Q Consensus 1362 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~ 1440 (1470)
|||++|||||+++|+||+|||||++||+.+...+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++++
T Consensus 174 ~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 253 (272)
T PRK14236 174 QQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDT 253 (272)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHH
Confidence 99999999999999999999999999999999999999987778999999999999865 99999999999999999999
Q ss_pred HhhcCC
Q 000475 1441 LLEDNS 1446 (1470)
Q Consensus 1441 Ll~~~~ 1446 (1470)
+.+++.
T Consensus 254 ~~~~~~ 259 (272)
T PRK14236 254 LFTSPA 259 (272)
T ss_pred HhcCCC
Confidence 986543
No 228
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.9e-39 Score=356.18 Aligned_cols=200 Identities=31% Similarity=0.463 Sum_probs=173.5
Q ss_pred EEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEE
Q 000475 1221 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSII 1300 (1470)
Q Consensus 1221 ~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiI 1300 (1470)
+++|++++|+.+...+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 46899999975324699999999999999999999999999999999999999999999999999888888889999999
Q ss_pred ccCC--CCCcccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1301 PQDP--MLFQGTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1301 pQdp--~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
||+| .++..|+++|+... ...+ ++++.++++..++.+.... ....||||||||++|||||
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~laral 149 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDR-----------SPFTLSGGQKQRVAIAGVL 149 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHHHHHHHHHHHHH
Confidence 9998 36788999999642 1122 2346667777777654432 2357999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCE
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGK 1431 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~ 1431 (1470)
+++|++|+|||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|+
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 150 AMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999999998764 47899999999999987 99999999985
No 229
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.5e-38 Score=364.06 Aligned_cols=221 Identities=25% Similarity=0.379 Sum_probs=185.3
Q ss_pred EEEEeEEEEeCCC-------CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH
Q 000475 1220 IELENLLVQYNPT-------LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD 1292 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~-------~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~ 1292 (1470)
|+++||+++|+.. ...+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999632 346999999999999999999999999999999999999999999999999998876543
Q ss_pred ---HhcccEEEccCCC--CC-cccHHHhcCc-C---CC----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCC
Q 000475 1293 ---LRSRLSIIPQDPM--LF-QGTVRTNLDP-L---EQ----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWS 1358 (1470)
Q Consensus 1293 ---LR~~isiIpQdp~--LF-~gTIR~NLdp-~---~~----~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS 1358 (1470)
+|++++|+||+|. ++ ..|+++|+.. . .. ..++++.++++..++.+.. +| ..+.+||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~------~~----~~~~~LS 152 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSED------AD----KLPRQLS 152 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh------hh----CChhhCC
Confidence 6788999999983 44 3699999842 1 11 1234566777777764211 12 2345799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000475 1359 VGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEY 1435 (1470)
Q Consensus 1359 gGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~ 1435 (1470)
||||||++|||||+++|+||+|||||++||+++...+.+.|++..+ ++|||+|+|+++.+.. ||++++|++|++++.
T Consensus 153 gGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 232 (265)
T TIGR02769 153 GGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEE 232 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEE
Confidence 9999999999999999999999999999999999999999987643 7899999999999975 999999999999999
Q ss_pred cChhHHhhcCCChHHH
Q 000475 1436 DSPRQLLEDNSSSFSK 1451 (1470)
Q Consensus 1436 g~p~~Ll~~~~s~f~~ 1451 (1470)
|+++++++. ...|.+
T Consensus 233 g~~~~~~~~-~~~~~~ 247 (265)
T TIGR02769 233 CDVAQLLSF-KHPAGR 247 (265)
T ss_pred CCHHHHcCC-CCHHHH
Confidence 999999874 344443
No 230
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.1e-38 Score=359.78 Aligned_cols=213 Identities=25% Similarity=0.402 Sum_probs=183.5
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCC--HHHHhccc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG--LQDLRSRL 1297 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~--l~~LR~~i 1297 (1470)
++++|++++|++ +++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999963 45999999999999999999999999999999999999999999999999998643 35678899
Q ss_pred EEEccCCCCCc-ccHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1298 SIIPQDPMLFQ-GTVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1298 siIpQdp~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
+|+||++.+|. .|+++|+... ...+ ++++.++++..++.+.... ....||+|||||++||
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~la 148 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHH-----------YPSELSGGQQQRVAIA 148 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhc-----------ChhhcCHHHHHHHHHH
Confidence 99999998886 5999999632 1112 2345667777776554332 2357999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1445 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~ 1445 (1470)
||++++|++|+|||||++||+++...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++.++++++
T Consensus 149 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 149 RALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 99999999999999999999999999999998764 47899999999999865 9999999999999999999988654
No 231
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-39 Score=352.03 Aligned_cols=210 Identities=27% Similarity=0.394 Sum_probs=174.5
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
|+++++++.|.... ......+++ ||+|++||+.||+|.+|+|||||++++.++-.|++|++ .++|
T Consensus 2 I~l~~vsK~~~~~~---~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v-~v~G~di~~l~~~~ 77 (339)
T COG1135 2 IELENVSKTFGQTG---TGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSV-FVDGQDLTALSEAE 77 (339)
T ss_pred eEEEeeeeeeccCC---CCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceE-EEcCEecccCChHH
Confidence 78999999998630 123467888 99999999999999999999999999999999999997 7887
Q ss_pred ------EeEEEcCCCCCCC-ccHHHHHhcCCCC----CHHHHHHHHH---HhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 660 ------KKAYVPQSSWIQT-GTIRENILFGKDM----RQSFYEEVLE---GCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~eNI~~g~~~----~~~~y~~v~~---~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
+||+++|++-+++ .||.+||.|..+. .++..++|.+ ..+|.+. .+..+.+|||||
T Consensus 78 Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk-----------~~~yP~qLSGGQ 146 (339)
T COG1135 78 LRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDK-----------ADRYPAQLSGGQ 146 (339)
T ss_pred HHHHHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhh-----------hccCchhcCcch
Confidence 3699999998876 7999999997643 2334444444 3344432 235678999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecC
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~ 802 (1470)
||||+|||||..+|+|+|.|||||||||+|.+.|.+- ++... -|-|+++|||.++.++. ||||.||++|++++.|+
T Consensus 147 KQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~L-L~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~ 225 (339)
T COG1135 147 KQRVAIARALANNPKILLCDEATSALDPETTQSILEL-LKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGT 225 (339)
T ss_pred hhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHH-HHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEecc
Confidence 9999999999999999999999999999999999874 43332 37899999999999987 99999999999999999
Q ss_pred hhhHHhhchhHHHH
Q 000475 803 YEDLIADQNSELVR 816 (1470)
Q Consensus 803 ~~~l~~~~~~~~~~ 816 (1470)
..+++.++..+..+
T Consensus 226 v~~vF~~Pk~~~t~ 239 (339)
T COG1135 226 VSEVFANPKHAITQ 239 (339)
T ss_pred HHHhhcCcchHHHH
Confidence 99998766555443
No 232
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-39 Score=369.30 Aligned_cols=223 Identities=24% Similarity=0.416 Sum_probs=198.7
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
..|+++||+.+|+ ...+++|+|++|++||.+.++|||||||||++++|.|+..|++|+|.+||.||..++++ ++.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 4699999999998 35699999999999999999999999999999999999999999999999999998877 6899
Q ss_pred EEEccCCCCCcc-cHHHhcCcC-C---CCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPL-E---QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~-~---~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
++|+|+..||+. ||++|+... . ...+ +.+.++|+.++|.++-.+.|. .|||||+||++||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~-----------qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPH-----------QLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChh-----------hhChHHHHHHHHH
Confidence 999999999987 999998642 2 1232 367899999999998877764 5899999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1445 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~ 1445 (1470)
|||..+|++|+||||-|+||..-...+|.-+++.. .+.|.|.|||+-..... +|||.||++|+|...|+|+|+..+|
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999999998887643 47899999999887654 9999999999999999999999999
Q ss_pred CChHHHHHHHHHh
Q 000475 1446 SSSFSKLVAEFLR 1458 (1470)
Q Consensus 1446 ~s~f~~lv~~~~~ 1458 (1470)
.+.| |+++-.
T Consensus 229 ~~~f---VA~FiG 238 (352)
T COG3842 229 ATRF---VADFIG 238 (352)
T ss_pred chHH---HHHHhC
Confidence 8877 455443
No 233
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-38 Score=363.50 Aligned_cols=225 Identities=23% Similarity=0.390 Sum_probs=189.1
Q ss_pred CCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEEcCEeCCC--
Q 000475 1215 PSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM-- 1287 (1470)
Q Consensus 1215 p~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~-- 1287 (1470)
|..-.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++..
T Consensus 20 ~~~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~ 97 (271)
T PRK14238 20 PKKVVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKS 97 (271)
T ss_pred CCceEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccc
Confidence 33346999999999964 359999999999999999999999999999999999987 699999999999853
Q ss_pred CCHHHHhcccEEEccCCCCCcccHHHhcCcC---CCCC-----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCCh
Q 000475 1288 IGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL---EQHS-----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSV 1359 (1470)
Q Consensus 1288 i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~---~~~s-----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSg 1359 (1470)
.+...+|++++|+||+|.+|..|+++|+... ...+ ++.+.++++..++.+.+. ......+.+|||
T Consensus 98 ~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~-------~~~~~~~~~LSg 170 (271)
T PRK14238 98 YSVEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELK-------DRLHDNAYGLSG 170 (271)
T ss_pred ccHHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHH-------HHHhcCcccCCH
Confidence 3556788999999999999999999999631 1222 223455566665533222 222345568999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000475 1360 GQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSP 1438 (1470)
Q Consensus 1360 GQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p 1438 (1470)
|||||++|||||+++|+||+|||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|++
T Consensus 171 Ge~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~ 250 (271)
T PRK14238 171 GQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDT 250 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999988778999999999999876 999999999999999999
Q ss_pred hHHhhcCCCh
Q 000475 1439 RQLLEDNSSS 1448 (1470)
Q Consensus 1439 ~~Ll~~~~s~ 1448 (1470)
.++.+++...
T Consensus 251 ~~~~~~~~~~ 260 (271)
T PRK14238 251 DKIFSNPSDK 260 (271)
T ss_pred HHHHcCCCCH
Confidence 9998765433
No 234
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-38 Score=360.94 Aligned_cols=219 Identities=24% Similarity=0.392 Sum_probs=188.5
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCCC--CHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMI--GLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1291 (1470)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999964 3599999999999999999999999999999999999875 799999999999753 345
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcCC---CC-C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPLE---QH-S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~~---~~-s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
.+|++++|+||+|.+|..|+++|+.... .. + ++++.++++.+++.+.+... .......||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~q 154 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDD-------LKKSALKLSGGQQQ 154 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhH-------hhCCcccCCHHHHH
Confidence 6789999999999999999999996321 11 1 23466788888875443321 22345679999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|++||||++++|+||+|||||++||+.+...+.+.|++..++.|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987767899999999999876 9999999999999999999998
Q ss_pred hcCC
Q 000475 1443 EDNS 1446 (1470)
Q Consensus 1443 ~~~~ 1446 (1470)
.++.
T Consensus 235 ~~~~ 238 (251)
T PRK14270 235 LEPQ 238 (251)
T ss_pred cCCC
Confidence 6543
No 235
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-38 Score=360.21 Aligned_cols=212 Identities=25% Similarity=0.345 Sum_probs=181.7
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCC------CCCHHHH
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDIS------MIGLQDL 1293 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~------~i~l~~L 1293 (1470)
++++|++++|+. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ......+
T Consensus 3 l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (242)
T PRK11124 3 IQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIREL 80 (242)
T ss_pred EEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHH
Confidence 789999999964 35999999999999999999999999999999999999999999999999874 1234567
Q ss_pred hcccEEEccCCCCCcc-cHHHhcCc--C--CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1294 RSRLSIIPQDPMLFQG-TVRTNLDP--L--EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1294 R~~isiIpQdp~LF~g-TIR~NLdp--~--~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
|++++|+||+|.+|.+ |+++|+.. . .... .+++.+.++..++.++.... ..+||||||||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qr 149 (242)
T PRK11124 81 RRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRF-----------PLHLSGGQQQR 149 (242)
T ss_pred HhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHH
Confidence 8899999999999976 99999952 1 1122 23456667777765544333 34799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
++||||++++|++|+|||||++||+++...+.+.|++.. +++|+|+++|+++.+.. ||++++|++|++++.|+++++.
T Consensus 150 v~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 229 (242)
T PRK11124 150 VAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFT 229 (242)
T ss_pred HHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhc
Confidence 999999999999999999999999999999999998764 47999999999999976 9999999999999999999876
Q ss_pred hc
Q 000475 1443 ED 1444 (1470)
Q Consensus 1443 ~~ 1444 (1470)
+.
T Consensus 230 ~~ 231 (242)
T PRK11124 230 QP 231 (242)
T ss_pred Cc
Confidence 53
No 236
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-38 Score=362.74 Aligned_cols=220 Identities=21% Similarity=0.408 Sum_probs=189.4
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEEcCEeCCC--CCHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1291 (1470)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGS--FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECC--EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 4899999999964 359999999999999999999999999999999999986 479999999999853 4566
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcCC---CC---CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPLE---QH---SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1365 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~~---~~---sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl 1365 (1470)
.+|++++++||+|.+|..|+++|+.... .. .++++.++++.+++.+.+... ....+.+||||||||+
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDK-------LKQSGLSLSGGQQQRL 160 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHH-------hcCCcccCCHHHHHHH
Confidence 7899999999999999889999996421 11 234566678888887655321 2334567999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEe---------CCEEEEe
Q 000475 1366 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLD---------EGKVLEY 1435 (1470)
Q Consensus 1366 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~---------~G~vvE~ 1435 (1470)
+|||||+++|+||+|||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||||++|+ +|++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~ 240 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEF 240 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999987777899999999999866 99999998 8999999
Q ss_pred cChhHHhhcCCC
Q 000475 1436 DSPRQLLEDNSS 1447 (1470)
Q Consensus 1436 g~p~~Ll~~~~s 1447 (1470)
|+++++.+++..
T Consensus 241 ~~~~~~~~~~~~ 252 (264)
T PRK14243 241 DRTEKIFNSPQQ 252 (264)
T ss_pred CCHHHHHhCCCc
Confidence 999999876543
No 237
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-38 Score=363.27 Aligned_cols=211 Identities=27% Similarity=0.453 Sum_probs=186.9
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
++++|++++|++ .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..++|+.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999964 359999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EccCCCCCcc-cHHHhcCcC--------CC---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHH
Q 000475 1300 IPQDPMLFQG-TVRTNLDPL--------EQ---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCL 1367 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp~--------~~---~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1367 (1470)
+||++.++.+ |+++|++.. +. ..++++.++++.+++.+... +. ...||||||||++|
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~LS~G~~qrv~l 149 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLAD-------RR----LTDLSGGQRQRAFL 149 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHc-------CC----cccCCHHHHHHHHH
Confidence 9999998877 999999742 11 12345778888888865433 22 35699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1368 ARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1368 ARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
|||++++|++|+|||||++||+++.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 150 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 150 AMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 999999999999999999999999999999998764 47899999999999875 99999999999999999999875
No 238
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-38 Score=364.04 Aligned_cols=224 Identities=22% Similarity=0.375 Sum_probs=192.7
Q ss_pred CCCCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCC---
Q 000475 1215 PSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDIS--- 1286 (1470)
Q Consensus 1215 p~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~--- 1286 (1470)
|..+.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 12 ~~~~~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 12 PTQQKSEVNKLNFYYGG--YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCCceEEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 56788999999999964 3599999999999999999999999999999999999875 7999999998874
Q ss_pred -CCCHHHHhcccEEEccCCCCCcccHHHhcCcCC--------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCC
Q 000475 1287 -MIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE--------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENW 1357 (1470)
Q Consensus 1287 -~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~--------~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nL 1357 (1470)
....+.+|++++|+||+|.+|.+|+++|+.... ...++++.++++.+++.+.+.. .......+|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKD-------RLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhH-------HHhCCcccC
Confidence 234567899999999999999999999996321 1224567888888887643322 223345679
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1358 SVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1358 SgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
|+|||||++|||||+++|++++|||||++||..+.+.+.+.|++..+++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999987767899999999999975 9999999999999999
Q ss_pred ChhHHhhcCCC
Q 000475 1437 SPRQLLEDNSS 1447 (1470)
Q Consensus 1437 ~p~~Ll~~~~s 1447 (1470)
+++++..++..
T Consensus 243 ~~~~~~~~~~~ 253 (265)
T PRK14252 243 ATDTIFIKPKN 253 (265)
T ss_pred CHHHHHhCCCC
Confidence 99999865433
No 239
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-38 Score=357.02 Aligned_cols=203 Identities=25% Similarity=0.326 Sum_probs=176.0
Q ss_pred EEEEeEEEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1220 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~--~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999996421 469999999999999999999999999999999999999999999999999863 47889
Q ss_pred EEEccCCCCCc-ccHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1298 SIIPQDPMLFQ-GTVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1298 siIpQdp~LF~-gTIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
+|+||+|.+|. .|+++|+... ... .++++.++++..++.+.....+ .+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----------HQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 99999999987 6999998632 111 2356778888888876554433 469999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEe--CCEEEEecCh
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLD--EGKVLEYDSP 1438 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~--~G~vvE~g~p 1438 (1470)
||+++|++|+|||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+.+ ||+|++|+ +|+++|.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999998763 37899999999998865 99999999 7999998763
No 240
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-38 Score=365.08 Aligned_cols=221 Identities=24% Similarity=0.442 Sum_probs=189.3
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEEcCEeCCC--CCH
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IGL 1290 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l 1290 (1470)
..|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++.. .+.
T Consensus 38 ~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 35899999999964 359999999999999999999999999999999999997 689999999999865 345
Q ss_pred HHHhcccEEEccCCCCCcccHHHhcCcC---CC---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1291 QDLRSRLSIIPQDPMLFQGTVRTNLDPL---EQ---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1291 ~~LR~~isiIpQdp~LF~gTIR~NLdp~---~~---~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
..+|++++|+||+|.+|.+|+++|+... .. ..++++.++++..++.+.+.. .++ ....+||||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~---~~~----~~~~~LSgGe~qr 188 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKD---QLD----SSGLDLSGGQQQR 188 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHH---HHh----CCcccCCHHHHHH
Confidence 6788999999999999989999999632 11 124567888888887544322 122 3346799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEE-EEeCCEEEEecChhHHh
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVL-VLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIl-vL~~G~vvE~g~p~~Ll 1442 (1470)
++|||||+++|+||||||||++||.++.+.+.+.|++..+++|||+++|+++.+.. |||++ +|++|+|++.|++.++.
T Consensus 189 v~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 189 LCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999988777899999999999876 99975 57999999999999998
Q ss_pred hcCCC
Q 000475 1443 EDNSS 1447 (1470)
Q Consensus 1443 ~~~~s 1447 (1470)
+++..
T Consensus 269 ~~~~~ 273 (285)
T PRK14254 269 ENPES 273 (285)
T ss_pred hCcCC
Confidence 76543
No 241
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.2e-38 Score=355.14 Aligned_cols=202 Identities=22% Similarity=0.398 Sum_probs=175.3
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++|
T Consensus 1 i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN--VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECC--eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 578999999964 3599999999999999999999999999999999999999999999999999766543 578999
Q ss_pred EccCCCCCc-ccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQ-GTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||++.+|. .|+++|+... ...+ ++++.++++..++.+.....| ..||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~laral 145 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKP-----------KQLSGGQRQRVALGRAI 145 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 999999885 5999999642 1122 334667788888876543332 46999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
+++|++|+|||||++||+++...+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|+++++|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999998864 37999999999999876 9999999999999886
No 242
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.3e-38 Score=355.24 Aligned_cols=201 Identities=26% Similarity=0.372 Sum_probs=174.7
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCH---HHHhcc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL---QDLRSR 1296 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l---~~LR~~ 1296 (1470)
|+++|++++|+.+ +.+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 459999999999999999999999999999999999999999999999999987754 347889
Q ss_pred cEEEccCCCCCcc-cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1297 LSIIPQDPMLFQG-TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1297 isiIpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
++++||+|.+|.. |+++|+... ...+ ++++.++++.+++.+.....| .+||+|||||++||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la 148 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP-----------AELSGGEQQRVAIA 148 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhcCHHHHHHHHHH
Confidence 9999999999985 999999632 1122 345778888888866543332 46999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEE
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKV 1432 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~v 1432 (1470)
|||+++|+|++|||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 149 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 149 RAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999863 57999999999999986 899999999974
No 243
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-38 Score=379.59 Aligned_cols=204 Identities=25% Similarity=0.432 Sum_probs=179.1
Q ss_pred cceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHH----hcccEEEccCCCCCcc-
Q 000475 1235 MVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL----RSRLSIIPQDPMLFQG- 1309 (1470)
Q Consensus 1235 ~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L----R~~isiIpQdp~LF~g- 1309 (1470)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.|+...+..++ |++++|+||++.+|..
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 38999999999999999999999999999999999999999999999999998877654 4689999999999975
Q ss_pred cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000475 1310 TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDE 1382 (1470)
Q Consensus 1310 TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDE 1382 (1470)
|+++|+... ...+ ++++.++++.++|.++....| .+||||||||++|||||+.+|+||+|||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 999999632 1122 345778889998876654443 4699999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChH
Q 000475 1383 ATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSF 1449 (1470)
Q Consensus 1383 aTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f 1449 (1470)
||++||+.+...+++.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+|+++++++...|
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999999999998764 47899999999999865 99999999999999999999988765444
No 244
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.6e-38 Score=361.37 Aligned_cols=215 Identities=26% Similarity=0.426 Sum_probs=183.4
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCC--------H
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG--------L 1290 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~--------l 1290 (1470)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 3899999999964 35999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhcccEEEccCCCCCc-ccHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000475 1291 QDLRSRLSIIPQDPMLFQ-GTVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1361 (1470)
Q Consensus 1291 ~~LR~~isiIpQdp~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQ 1361 (1470)
..+|++++|+||+|.+|. .|+++|+... .... ++.+.++++..++.+. ......+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGK-----------ETSYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcch-----------hhCChhhCChHH
Confidence 467889999999999886 5999999631 1222 2335566666665432 223446799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChh
Q 000475 1362 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPR 1439 (1470)
Q Consensus 1362 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~ 1439 (1470)
|||++|||||+++|++|+|||||++||+.+...+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|+++
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 229 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAK 229 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998764 47899999999999976 9999999999999999999
Q ss_pred HHhhcCC
Q 000475 1440 QLLEDNS 1446 (1470)
Q Consensus 1440 ~Ll~~~~ 1446 (1470)
++.+.+.
T Consensus 230 ~~~~~~~ 236 (250)
T PRK11264 230 ALFADPQ 236 (250)
T ss_pred HHhcCCC
Confidence 9886544
No 245
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-38 Score=358.77 Aligned_cols=211 Identities=25% Similarity=0.409 Sum_probs=185.9
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+. ..+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .|+.+++
T Consensus 1 l~~~~l~~~~~~--~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGG--FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 578999999964 359999999999999999999999999999999999999999999999999987654 3788999
Q ss_pred EccCCCCCcc-cHHHhcCcC-C------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQG-TVRTNLDPL-E------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp~-~------~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||+|.+|.+ |+++|+... . ...++++.++++..++.++....| .+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~laral 145 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARAL 145 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999999976 999999631 1 112456778888888876655443 47999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1445 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~ 1445 (1470)
+++|++++|||||+++|+.+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|++.++.+.+
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~ 222 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEP 222 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCC
Confidence 999999999999999999999999999987643 7999999999999876 9999999999999999999998654
No 246
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.9e-38 Score=372.42 Aligned_cols=227 Identities=25% Similarity=0.385 Sum_probs=189.0
Q ss_pred cEEEEeEEEEeCC--CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEEcCEeCCCCCHHHH
Q 000475 1219 KIELENLLVQYNP--TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS---GGRILIDGVDISMIGLQDL 1293 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~--~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~---~G~I~IDG~dI~~i~l~~L 1293 (1470)
.++++|++++|+. +...+++||||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 5899999999963 2236999999999999999999999999999999999999996 9999999999999987765
Q ss_pred h----cccEEEccCC--CCCcc-cHHHhcC----cCCCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCC
Q 000475 1294 R----SRLSIIPQDP--MLFQG-TVRTNLD----PLEQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWS 1358 (1470)
Q Consensus 1294 R----~~isiIpQdp--~LF~g-TIR~NLd----p~~~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS 1358 (1470)
| ++|+|||||| .++.. |+.+|+. .....+. +++.+.|+.+++.+ +.+ .+......||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~-------~~~-~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPE-------ARK-RMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCC-------hHH-HhcCCcccCC
Confidence 4 4799999999 45543 7777663 2222232 23556677666532 111 1344566899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000475 1359 VGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEY 1435 (1470)
Q Consensus 1359 gGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~ 1435 (1470)
||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999987643 7899999999999975 999999999999999
Q ss_pred cChhHHhhcCCChHHHHH
Q 000475 1436 DSPRQLLEDNSSSFSKLV 1453 (1470)
Q Consensus 1436 g~p~~Ll~~~~s~f~~lv 1453 (1470)
|+++++++++...|.+..
T Consensus 244 g~~~~i~~~p~~pyt~~l 261 (330)
T PRK09473 244 GNARDVFYQPSHPYSIGL 261 (330)
T ss_pred CCHHHHHhCCCCHHHHHH
Confidence 999999998877776643
No 247
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.1e-38 Score=355.72 Aligned_cols=200 Identities=25% Similarity=0.380 Sum_probs=175.2
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHH---HHhcc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ---DLRSR 1296 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR~~ 1296 (1470)
|+++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.. .+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 6899999999533 4599999999999999999999999999999999999999999999999999887643 46889
Q ss_pred cEEEccCCCCCc-ccHHHhcCcC----C---CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1297 LSIIPQDPMLFQ-GTVRTNLDPL----E---QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1297 isiIpQdp~LF~-gTIR~NLdp~----~---~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
++|+||+|.+|. .|+++|+... + ...+++++++++..++.+.....| .+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~la 149 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAIA 149 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999986 5999998642 1 112456788899998876544333 46999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCE
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGK 1431 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~ 1431 (1470)
|||+++|++|+|||||++||+.+...+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|+
T Consensus 150 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 150 RAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999864 47999999999999986 99999999985
No 248
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-38 Score=357.69 Aligned_cols=212 Identities=24% Similarity=0.350 Sum_probs=179.6
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH-Hhccc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i 1297 (1470)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+ .|+++
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999998887655 67889
Q ss_pred EEEccCCCCCcc-cHHHhcCcCCC-CCHH----HHHHHHHHc-CcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPLEQ-HSDQ----EIWEVINKC-HLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~~~-~sd~----eI~~aL~~~-~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
+++||++.+|.+ |+++|+..... .+.+ ++.++++.. ++.+ ..+. ....||+|||||++||||
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~-------~~~~----~~~~LS~G~~qrl~la~a 151 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHE-------RRIQ----RAGTMSGGEQQMLAIGRA 151 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHH-------HHhC----chhhCCHHHHHHHHHHHH
Confidence 999999999986 99999964211 1222 233333333 1221 1222 345799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
++++|+||+|||||++||+++...+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 152 LMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred HHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 999999999999999999999999999998754 47999999999998765 99999999999999999999975
No 249
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-38 Score=360.63 Aligned_cols=224 Identities=24% Similarity=0.394 Sum_probs=190.6
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCCC--CHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMI--GLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1291 (1470)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 5899999999963 3599999999999999999999999999999999999763 489999999999876 456
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcCC---C-C----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPLE---Q-H----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~~---~-~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
+.|++++|+||+|.+|++|+++|+.... . . .++.+.++++.+++.+.+.. .....+.+||+||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~q 156 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKD-------RLHDSALSLSGGQQQ 156 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHH-------HhhcChhhCCHHHHH
Confidence 7889999999999999999999997421 1 1 13346677777777544321 234445689999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|++||||++.+|++++|||||++||+++.+.+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 157 RLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 999999999999999999999999999999999999987777999999999999975 9999999999999999999998
Q ss_pred hcCCChHHH
Q 000475 1443 EDNSSSFSK 1451 (1470)
Q Consensus 1443 ~~~~s~f~~ 1451 (1470)
+++...+.+
T Consensus 237 ~~~~~~~~~ 245 (253)
T PRK14261 237 ENPHEELTE 245 (253)
T ss_pred hCCCcHHHH
Confidence 765444443
No 250
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-38 Score=368.93 Aligned_cols=217 Identities=28% Similarity=0.406 Sum_probs=182.2
Q ss_pred CCcEEEEeEEEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCC----C-
Q 000475 1217 SGKIELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM----I- 1288 (1470)
Q Consensus 1217 ~g~I~~~nvs~~Y~~~~---~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~----i- 1288 (1470)
.|.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. +
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 47899999999996432 259999999999999999999999999999999999999999999999999853 2
Q ss_pred CHHHHhcccEEEccCC--CCCcccHHHhcCcCC---CCCHHH----HHHHHHHcCcH-HHHHhcccccCccccCCCCCCC
Q 000475 1289 GLQDLRSRLSIIPQDP--MLFQGTVRTNLDPLE---QHSDQE----IWEVINKCHLA-EIVRQDQRLLDAPVAEDGENWS 1358 (1470)
Q Consensus 1289 ~l~~LR~~isiIpQdp--~LF~gTIR~NLdp~~---~~sd~e----I~~aL~~~~L~-~~v~~lp~gLdt~v~e~G~nLS 1358 (1470)
+...+|++++|+||+| .+|..|+++|+.... ..+.++ +.+.++..++. ++ ++ .....||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~-------~~----~~~~~LS 152 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDY-------VK----RSPFELS 152 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH-------hc----CChhhCC
Confidence 3567889999999998 477889999996321 223322 34455555542 22 12 3345799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000475 1359 VGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEY 1435 (1470)
Q Consensus 1359 gGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~ 1435 (1470)
||||||++|||||+++|++|+|||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.
T Consensus 153 ~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~ 232 (289)
T PRK13645 153 GGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISI 232 (289)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999999999998764 37899999999998865 999999999999999
Q ss_pred cChhHHhhc
Q 000475 1436 DSPRQLLED 1444 (1470)
Q Consensus 1436 g~p~~Ll~~ 1444 (1470)
|++++++++
T Consensus 233 g~~~~~~~~ 241 (289)
T PRK13645 233 GSPFEIFSN 241 (289)
T ss_pred CCHHHHhcC
Confidence 999988753
No 251
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-38 Score=363.90 Aligned_cols=213 Identities=22% Similarity=0.383 Sum_probs=188.5
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
-.|+++|++++|+. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999964 3599999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEccCCCCCc-ccHHHhcCcCC--------C---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000475 1298 SIIPQDPMLFQ-GTVRTNLDPLE--------Q---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1365 (1470)
Q Consensus 1298 siIpQdp~LF~-gTIR~NLdp~~--------~---~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl 1365 (1470)
+|+||++.+|. .|+++|+.... . ..+++++++++..++.+... . ....||+|||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~----~~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLAD-------Q----SVDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhc-------C----CcccCChHHHHHH
Confidence 99999998875 59999996421 1 12345788888888876532 2 2357999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1366 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1366 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
+||||++++|++|+|||||++||+.+...+.+.|++.. .++|||+++|+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999998864 37899999999998866 9999999999999999999987
Q ss_pred h
Q 000475 1443 E 1443 (1470)
Q Consensus 1443 ~ 1443 (1470)
+
T Consensus 233 ~ 233 (265)
T PRK10253 233 T 233 (265)
T ss_pred h
Confidence 5
No 252
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-35 Score=330.96 Aligned_cols=471 Identities=23% Similarity=0.265 Sum_probs=340.8
Q ss_pred chhhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccChhhHHHHHhhchhhhhcchHHHHHH
Q 000475 928 QLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAG 1007 (1470)
Q Consensus 928 ~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~vl~ap~~ffd~~p~G~ilnR~s~D~~~id~~l~~~l~~ 1007 (1470)
.++-.|+++.....+...+........+...-.+++.++.++++.+|+.-+++-..++++.++++|+..|. .-...+..
T Consensus 49 ~~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~IS-f~~s~lp~ 127 (546)
T COG4615 49 LVLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNIS-FAFSRLPE 127 (546)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhccccccee-ehHhhhHH
Confidence 44445555555555566667777888999999999999999999999999999999999999999999998 33344566
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHhhhh
Q 000475 1008 LAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAG 1087 (1470)
Q Consensus 1008 ~~~~~~~~~~~~~v~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~y~~~sr~l~rl~~~~~sp~~~~~~Etl~G 1087 (1470)
+.++.+-.+++.+.+++.+|+.+.+.+..+++.++.+.+.+++.+ -+..++||. ...+.++++..+.|
T Consensus 128 ~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~-----k~~~aare~-------ed~Lq~~y~~il~G 195 (546)
T COG4615 128 LVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVY-----KHMAAARET-------EDKLQNDYQTILEG 195 (546)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHhh-------HHHHHHHHHHHhcc
Confidence 888888899999999999999988887777777776643333222 122334442 34577899999999
Q ss_pred hHHHHhhchHHHHHHHHHHHHHH------HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHH
Q 000475 1088 ATTIRCFNQENRFLLRSHSLIDD------YSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAA 1161 (1470)
Q Consensus 1088 ~~tIRaf~~e~~f~~~~~~~~d~------~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l 1161 (1470)
.+..+..+...+........-+. ..+..........|-...+-.+..+++... +..+ -++.. .+.
T Consensus 196 ~KEL~l~r~R~~~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~la------l~~~--w~st~-~a~ 266 (546)
T COG4615 196 RKELTLNRERAEYVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLA------LSLG--WASTN-VAA 266 (546)
T ss_pred hhhheechHHHHHHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH------Hhhc--cchhh-HHH
Confidence 99988876544433322211111 111111112333444333222222111111 1010 01111 223
Q ss_pred HHHH---HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCCcEEEEeEEEEeCCCCCccee
Q 000475 1162 TYGL---NLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLK 1238 (1470)
Q Consensus 1162 ~y~l---~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk 1238 (1470)
++.+ -+...+..++..+..+-...++..||.++...|..+. -....+-|+| ..||++||.|.|.++. .-+.
T Consensus 267 tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~--~~~~q~~p~~---~~lelrnvrfay~~~~-Fhvg 340 (546)
T COG4615 267 TIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKAD--FPRPQAFPDW---KTLELRNVRFAYQDNA-FHVG 340 (546)
T ss_pred HHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCcccc--CCCCCcCCcc---cceeeeeeeeccCccc-ceec
Confidence 3332 3455666677777777888889999998876333221 1222233445 4799999999998763 4578
Q ss_pred eeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcccHHHhcCcC
Q 000475 1239 GITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL 1318 (1470)
Q Consensus 1239 ~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~ 1318 (1470)
.||++|+.||.|=|+|.|||||||++++|.|++.|++|+|++||.+++.-++++.|+-++-|.-|-.||+.++ -|.
T Consensus 341 PiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll----~~e 416 (546)
T COG4615 341 PINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL----GPE 416 (546)
T ss_pred ceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh----CCc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999998664 344
Q ss_pred CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHH
Q 000475 1319 EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQT 1398 (1470)
Q Consensus 1319 ~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~ 1398 (1470)
+..+.+.|..-|++..+.....-. +|-=++ -.||-|||.|+++--|+|-+.+|+++||=-|.-||.=.+...+.
T Consensus 417 ~~as~q~i~~~LqrLel~~ktsl~-d~~fs~-----~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~ 490 (546)
T COG4615 417 GKASPQLIEKWLQRLELAHKTSLN-DGRFSN-----LKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQV 490 (546)
T ss_pred cCCChHHHHHHHHHHHHhhhhccc-CCcccc-----cccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHH
Confidence 447777777777776655443221 211111 25899999999999999999999999999999999999988776
Q ss_pred HHHh--cCCcEEEEEecChhhhhhcCEEEEEeCCEEEEec
Q 000475 1399 IREE--TSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1399 I~~~--~~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g 1436 (1470)
+-.. -.|+||+.|+|+-+--..+||++.|++|+++|.-
T Consensus 491 lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~t 530 (546)
T COG4615 491 LLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSELT 530 (546)
T ss_pred HhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeecc
Confidence 6432 2589999999999999999999999999999873
No 253
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-38 Score=377.39 Aligned_cols=218 Identities=25% Similarity=0.434 Sum_probs=189.9
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
..|+++|++++|+. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++...+. .|+++
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 35999999999964 359999999999999999999999999999999999999999999999999987664 47799
Q ss_pred EEEccCCCCCcc-cHHHhcCcC-C--CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPL-E--QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~-~--~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
+|++|++.+|.. |+++|+... . ..+ ++++.++++..++.++..+.| .+||||||||++|||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP-----------HQLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999976 999999732 1 222 345677888888866544433 469999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNS 1446 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~ 1446 (1470)
||+++|++|+||||||+||..+...+.+.|++.. .+.|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++.
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~ 242 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPT 242 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCc
Confidence 9999999999999999999999999988777653 36899999999999765 99999999999999999999998887
Q ss_pred ChHH
Q 000475 1447 SSFS 1450 (1470)
Q Consensus 1447 s~f~ 1450 (1470)
..|.
T Consensus 243 ~~~~ 246 (377)
T PRK11607 243 TRYS 246 (377)
T ss_pred cHHH
Confidence 6653
No 254
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-38 Score=366.86 Aligned_cols=215 Identities=27% Similarity=0.393 Sum_probs=182.4
Q ss_pred EEEEeEEEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCC----CHHH
Q 000475 1220 IELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI----GLQD 1292 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~---~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~~ 1292 (1470)
|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997432 3599999999999999999999999999999999999999999999999999764 3567
Q ss_pred HhcccEEEccCC--CCCcccHHHhcCcC---CCCCHHH----HHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1293 LRSRLSIIPQDP--MLFQGTVRTNLDPL---EQHSDQE----IWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1293 LR~~isiIpQdp--~LF~gTIR~NLdp~---~~~sd~e----I~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
+|++++|+||+| .+|+.|+++|+... ...++++ +.++++..++.+. ........|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHHHH
Confidence 889999999998 68889999999632 1223332 3455666666421 112234579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1441 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~L 1441 (1470)
|++|||||+++|++|||||||++||+++.+.+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998764 37899999999999865 999999999999999999998
Q ss_pred hhc
Q 000475 1442 LED 1444 (1470)
Q Consensus 1442 l~~ 1444 (1470)
+++
T Consensus 233 ~~~ 235 (280)
T PRK13649 233 FQD 235 (280)
T ss_pred hcC
Confidence 764
No 255
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-38 Score=366.80 Aligned_cols=215 Identities=32% Similarity=0.465 Sum_probs=182.9
Q ss_pred cEEEEeEEEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCC----CHH
Q 000475 1219 KIELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI----GLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~---~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~ 1291 (1470)
.|+++|++++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997432 3599999999999999999999999999999999999999999999999999753 245
Q ss_pred HHhcccEEEccCC--CCCcccHHHhcCcC---CCCCH----HHHHHHHHHcCcH-HHHHhcccccCccccCCCCCCChhH
Q 000475 1292 DLRSRLSIIPQDP--MLFQGTVRTNLDPL---EQHSD----QEIWEVINKCHLA-EIVRQDQRLLDAPVAEDGENWSVGQ 1361 (1470)
Q Consensus 1292 ~LR~~isiIpQdp--~LF~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~-~~v~~lp~gLdt~v~e~G~nLSgGQ 1361 (1470)
..|++++|+||+| .+|..|+++|+... ...+. +.+.++++.+++. ++. +. ...+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-------~~----~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLI-------SK----SPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHh-------hC----CcccCCHHH
Confidence 6788999999998 57888999999521 12222 2356667777764 232 22 235799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChh
Q 000475 1362 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPR 1439 (1470)
Q Consensus 1362 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~ 1439 (1470)
|||++|||||+++|++|+|||||++||+.+...+.+.|++.. ++.|||++||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999864 47899999999999865 9999999999999999999
Q ss_pred HHhhc
Q 000475 1440 QLLED 1444 (1470)
Q Consensus 1440 ~Ll~~ 1444 (1470)
+++++
T Consensus 231 ~~~~~ 235 (287)
T PRK13641 231 EIFSD 235 (287)
T ss_pred HHhcC
Confidence 98753
No 256
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-38 Score=356.57 Aligned_cols=210 Identities=25% Similarity=0.442 Sum_probs=184.9
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|.. + +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~--~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE--F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC--c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 578999999963 3 8999999999999999999999999999999999999999999999999987654 3789999
Q ss_pred EccCCCCCc-ccHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQ-GTVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~-gTIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||++.+|. .|+++|+... ... .++++.++++.+++.+.+.+.+ .+||+|||||++||||+
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 144 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP-----------ETLSGGEQQRVAIARAL 144 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc-----------ccCCHHHHHHHHHHHHH
Confidence 999999985 6999999631 111 2345778888898877654433 46999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1445 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~ 1445 (1470)
+++|++++|||||++||..+.+.+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|++++.|+++++.+.+
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 999999999999999999999999999998643 7999999999999876 9999999999999999999998754
No 257
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=2.7e-38 Score=340.39 Aligned_cols=172 Identities=36% Similarity=0.614 Sum_probs=162.4
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+.+..++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997544469999999999999999999999999999999999999999999999999999998899999999
Q ss_pred EccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000475 1300 IPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILV 1379 (1470)
Q Consensus 1300 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILl 1379 (1470)
+||+|.+|++|+++|+ ||+|||||++|||||+++|++|+
T Consensus 81 ~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~ll 119 (173)
T cd03246 81 LPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRILV 119 (173)
T ss_pred ECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 99999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEEEEeCCEE
Q 000475 1380 LDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVLVLDEGKV 1432 (1470)
Q Consensus 1380 LDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~~DrIlvL~~G~v 1432 (1470)
|||||++||+.+...+.+.|++.. +++|+|+++|+++.+..||+|++|++|++
T Consensus 120 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 120 LDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999998764 47899999999999988999999999974
No 258
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-38 Score=357.32 Aligned_cols=204 Identities=27% Similarity=0.365 Sum_probs=179.1
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
..|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 11 ~~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 11 TPLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred CcEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 35999999999964 35999999999999999999999999999999999999999999999998763 568899
Q ss_pred EEEccCCCCCc-ccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCC
Q 000475 1298 SIIPQDPMLFQ-GTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1375 (1470)
Q Consensus 1298 siIpQdp~LF~-gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1375 (1470)
+|+||+|.+|. .|+++|+... ....++++.++++..++.+.... ...+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRANE-----------WPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhcC-----------ChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 5999999743 22235678888999888665432 23579999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChh
Q 000475 1376 RILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPR 1439 (1470)
Q Consensus 1376 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~ 1439 (1470)
++|+|||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.++..
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998753 37999999999999865 9999999999999988754
No 259
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-38 Score=361.18 Aligned_cols=223 Identities=24% Similarity=0.409 Sum_probs=190.9
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCC-----CcEEEEcCEeCCC--CCH
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS-----GGRILIDGVDISM--IGL 1290 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~-----~G~I~IDG~dI~~--i~l 1290 (1470)
+.|+++|++++|+. +.+|+|+||++++||.+||+|++|||||||+++|.|+++|+ +|+|.+||.|++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 46999999999964 35999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HHHhcccEEEccCCCCCcccHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000475 1291 QDLRSRLSIIPQDPMLFQGTVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1362 (1470)
Q Consensus 1291 ~~LR~~isiIpQdp~LF~gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQr 1362 (1470)
..+|+.++++||++.+|..|+++|+... +..+ ++.+.++++.+++.+++..+ .......||||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LSgGq~ 156 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHK-------IHKSALDLSGGQQ 156 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhH-------hcCCcccCCHHHH
Confidence 6788999999999999999999999632 1112 23467788888886655422 2334567999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeC-----CEEEE
Q 000475 1363 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDE-----GKVLE 1434 (1470)
Q Consensus 1363 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~-----G~vvE 1434 (1470)
||++|||||+++|+||+|||||+++|+++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |++++
T Consensus 157 qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~ 236 (261)
T PRK14258 157 QRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVE 236 (261)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEE
Confidence 99999999999999999999999999999999999998742 48999999999999876 999999999 99999
Q ss_pred ecChhHHhhcCCChH
Q 000475 1435 YDSPRQLLEDNSSSF 1449 (1470)
Q Consensus 1435 ~g~p~~Ll~~~~s~f 1449 (1470)
.|+|+++.+++...+
T Consensus 237 ~~~~~~~~~~~~~~~ 251 (261)
T PRK14258 237 FGLTKKIFNSPHDSR 251 (261)
T ss_pred eCCHHHHHhCCCCHH
Confidence 999999987765533
No 260
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-38 Score=359.44 Aligned_cols=211 Identities=27% Similarity=0.401 Sum_probs=185.8
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (258)
T PRK13548 3 LEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAV 80 (258)
T ss_pred EEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEE
Confidence 789999999964 359999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EccCCCC-CcccHHHhcCcCC--C-----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPML-FQGTVRTNLDPLE--Q-----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~L-F~gTIR~NLdp~~--~-----~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||++.+ +..|+++|+.... . ..++++.++++.+++.+... .. ...||||||||++|||||
T Consensus 81 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~LSgGe~qrv~la~al 149 (258)
T PRK13548 81 LPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAG-------RD----YPQLSGGEQQRVQLARVL 149 (258)
T ss_pred EccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhc-------CC----cccCCHHHHHHHHHHHHH
Confidence 9999987 6779999986421 1 12345778888888865432 22 347999999999999999
Q ss_pred c------cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1372 L------KKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1372 L------r~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
+ ++|++|+|||||++||+.+...+.+.|++.. .+.|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 150 ~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 150 AQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred hcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHh
Confidence 9 5999999999999999999999999998764 47899999999999875 9999999999999999999987
Q ss_pred h
Q 000475 1443 E 1443 (1470)
Q Consensus 1443 ~ 1443 (1470)
+
T Consensus 230 ~ 230 (258)
T PRK13548 230 T 230 (258)
T ss_pred C
Confidence 5
No 261
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.6e-38 Score=358.44 Aligned_cols=211 Identities=27% Similarity=0.430 Sum_probs=178.2
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH-HhcccE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRLS 1298 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~is 1298 (1470)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ--SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC--eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 578999999974 35999999999999999999999999999999999999999999999999998877655 467899
Q ss_pred EEccCCCCCcc-cHHHhcCcC-CC--CCHHH-HHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHcc
Q 000475 1299 IIPQDPMLFQG-TVRTNLDPL-EQ--HSDQE-IWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1373 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp~-~~--~sd~e-I~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1373 (1470)
|+||++.+|.+ |+++|+... .. ..+++ ..++++..+ +++........+||||||||++|||||++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999987 999999632 11 12222 233333332 12222233445799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1374 KKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1374 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
+|++++|||||++||+.+...+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999999999999998653 7899999999999986 9999999999999999999873
No 262
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-38 Score=356.75 Aligned_cols=212 Identities=24% Similarity=0.431 Sum_probs=181.8
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH-Hhccc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i 1297 (1470)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+ .|+++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 3789999999963 35999999999999999999999999999999999999999999999999998877654 57899
Q ss_pred EEEccCCCCCcc-cHHHhcCcCC----CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPLE----QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~~----~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
+++||+|.+|.+ |+++|+.... ..+ ++.+.+.++..++.+. .......||+|||||++||
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la 149 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHL-----------RDSMGQSLSGGERRRVEIA 149 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHH-----------hhcchhhCCHHHHHHHHHH
Confidence 999999998875 9999997431 112 2234555665555432 2333457999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
||++++|++|+|||||++||+.+...+.+.+++.. +++|||+++|+++.+.. ||+|++|++|++++.|+++++++
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999988754 47899999999988765 99999999999999999999875
No 263
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.8e-38 Score=369.14 Aligned_cols=212 Identities=25% Similarity=0.373 Sum_probs=183.0
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999964 3599999999999999999999999999999999999999999999999998764 356789999
Q ss_pred EEccCCCCCc-ccHHHhcCcC---CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1299 IIPQDPMLFQ-GTVRTNLDPL---EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1299 iIpQdp~LF~-gTIR~NLdp~---~~~sd~----eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
|+||+|.++. .|+++|+... ...+++ ++.++++.+++.+. ++..+ ..||||||||++||||
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-------~~~~~----~~LSgG~~qrv~la~a 149 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-------ADVRV----ALLSGGMKRRLTLARA 149 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhH-------hcCch----hhCCHHHHHHHHHHHH
Confidence 9999999885 5999999631 123332 34456666666433 34444 4699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
|+++|++|+|||||++||+.+...+.+.|++.. +++|||+++|+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999998863 47899999999999976 999999999999999999999754
No 264
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-38 Score=361.60 Aligned_cols=220 Identities=27% Similarity=0.420 Sum_probs=188.3
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCCCC-HHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMIG-LQD 1292 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i~-l~~ 1292 (1470)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 5899999999964 3599999999999999999999999999999999999986 6999999999998763 456
Q ss_pred HhcccEEEccCCCCCcccHHHhcCcC----CCCCHHHH----HHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1293 LRSRLSIIPQDPMLFQGTVRTNLDPL----EQHSDQEI----WEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1293 LR~~isiIpQdp~LF~gTIR~NLdp~----~~~sd~eI----~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
+|++++|+||+|.+|..|+++|+... ...+++++ .+.++.+++.+... +.......+||+|||||
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LSgGq~qr 171 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVK-------DRLSDSPFRLSGGQQQL 171 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhCCcccCCHHHHHH
Confidence 88999999999999999999999632 12344443 34566666643321 22334566899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
++|||||+++|++|||||||++||..+.+.+.+.|++..+++|||+|+|+++.+.. ||||++|++|++++.|+++++.+
T Consensus 172 l~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 251 (276)
T PRK14271 172 LCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFS 251 (276)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667999999999999876 99999999999999999999987
Q ss_pred cCCC
Q 000475 1444 DNSS 1447 (1470)
Q Consensus 1444 ~~~s 1447 (1470)
++..
T Consensus 252 ~~~~ 255 (276)
T PRK14271 252 SPKH 255 (276)
T ss_pred CcCc
Confidence 6543
No 265
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-38 Score=350.09 Aligned_cols=200 Identities=30% Similarity=0.440 Sum_probs=175.2
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|++. . .|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~~-~---~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ-P---MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE-e---cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999642 2 39999999999999999999999999999999999999999999999987653 4678999
Q ss_pred EccCCCCCcc-cHHHhcCcC-C---C---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQG-TVRTNLDPL-E---Q---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp~-~---~---~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||+|.+|.+ |+++|+... . . .+++++.++++.+++.+.....| .+||+|||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999986 999999732 1 1 23456888999999876655443 36999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
+++|++|+|||||++||.++...+.+.|++.. .++|+|+|+|+++.+.. ||+|++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999864 37899999999999976 9999999999998764
No 266
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-38 Score=360.43 Aligned_cols=219 Identities=23% Similarity=0.422 Sum_probs=186.4
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCC--CCHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISM--IGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~l~ 1291 (1470)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGS--FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECC--EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 5899999999964 2599999999999999999999999999999999999974 69999999999854 4456
Q ss_pred HHhcccEEEccCCCCCcc-cHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000475 1292 DLRSRLSIIPQDPMLFQG-TVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1362 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~g-TIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQr 1362 (1470)
.+|+.++++||++.+|.. |+++|+... +..+ ++.+.++++.+++.+.+.. .++ ....+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LS~G~~ 154 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKD---RLD----KPGGGLSGGQQ 154 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh---Hhh----CCcccCCHHHH
Confidence 788999999999999874 999998631 1111 3456677888887544321 123 33467999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEe------CCEEEEe
Q 000475 1363 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLD------EGKVLEY 1435 (1470)
Q Consensus 1363 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~------~G~vvE~ 1435 (1470)
||++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||+|++|+ +|+|++.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 9999999999999999999999999999999999999987667999999999999865 99999997 8999999
Q ss_pred cChhHHhhcCC
Q 000475 1436 DSPRQLLEDNS 1446 (1470)
Q Consensus 1436 g~p~~Ll~~~~ 1446 (1470)
|+++++++++.
T Consensus 235 ~~~~~~~~~~~ 245 (258)
T PRK14241 235 DDTEKIFSNPT 245 (258)
T ss_pred CCHHHHHhCcC
Confidence 99999987544
No 267
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=5.2e-38 Score=353.86 Aligned_cols=206 Identities=23% Similarity=0.292 Sum_probs=179.1
Q ss_pred cEEEEeEEEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH---H
Q 000475 1219 KIELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---L 1293 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~--~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---L 1293 (1470)
.|+++|++++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+ .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 589999999997532 25999999999999999999999999999999999999999999999999998877654 2
Q ss_pred -hcccEEEccCCCCCcc-cHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1294 -RSRLSIIPQDPMLFQG-TVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1294 -R~~isiIpQdp~LF~g-TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
+++++++||+|.+|.+ |+++|+... ... ..+++.++++.+++.+.....| ..||+|||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHH
Confidence 3689999999999885 999998631 111 2346778888888876654433 3699999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeCCEEEEe
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEY 1435 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~ 1435 (1470)
++|||||+++|++|+|||||++||+++.+.+.+.|++.. .++|||+|+|+++.+..||+|++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999999998763 37899999999999988999999999999874
No 268
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-38 Score=360.91 Aligned_cols=220 Identities=25% Similarity=0.420 Sum_probs=189.2
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCC--CCH
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISM--IGL 1290 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~l 1290 (1470)
-.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. ...
T Consensus 19 ~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 19 SVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred ceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 36999999999964 3599999999999999999999999999999999999863 58999999999864 344
Q ss_pred HHHhcccEEEccCCCCCcccHHHhcCcCC---C---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1291 QDLRSRLSIIPQDPMLFQGTVRTNLDPLE---Q---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1291 ~~LR~~isiIpQdp~LF~gTIR~NLdp~~---~---~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
..+|++++|+||++.+|..|+++|+.... . ..++++.++++.+++.+.+.. .++ .....||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~---~~~----~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD---KLK----EKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH---Hhc----CCcccCCHHHHHH
Confidence 56789999999999999899999996421 1 124456777888887655432 223 3346799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEe---------CCEEEE
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLD---------EGKVLE 1434 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~---------~G~vvE 1434 (1470)
++|||||+++|++|||||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||++++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999988778999999999999965 99999997 899999
Q ss_pred ecChhHHhhcCC
Q 000475 1435 YDSPRQLLEDNS 1446 (1470)
Q Consensus 1435 ~g~p~~Ll~~~~ 1446 (1470)
.|+++++.+++.
T Consensus 250 ~g~~~~~~~~~~ 261 (274)
T PRK14265 250 FSPTEQMFGSPQ 261 (274)
T ss_pred eCCHHHHHhCCC
Confidence 999999987654
No 269
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-38 Score=358.97 Aligned_cols=222 Identities=19% Similarity=0.310 Sum_probs=191.6
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCCC--CHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMI--GLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1291 (1470)
.+.+++.+++|.+ .++|+|+||++++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... ...
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4789999999964 3599999999999999999999999999999999999986 799999999998653 445
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcCCC------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPLEQ------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1365 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~~~------~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl 1365 (1470)
.+|++++|+||+|.+|..|+++|+..... ..++++.++++.+++.+.+... ..+...+||+|||||+
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~-------~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKDK-------LKVSGLSLSGGQQQRL 158 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhhh-------hhCCcccCCHHHHHHH
Confidence 67889999999999999999999974311 1235678889998886655322 2345568999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEe--------CCEEEEec
Q 000475 1366 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLD--------EGKVLEYD 1436 (1470)
Q Consensus 1366 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~--------~G~vvE~g 1436 (1470)
+|||||+++|++|+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.+ ||||++|+ +|++++.|
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g 238 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMG 238 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeC
Confidence 9999999999999999999999999999999999988777899999999999876 99999996 89999999
Q ss_pred ChhHHhhcCCChH
Q 000475 1437 SPRQLLEDNSSSF 1449 (1470)
Q Consensus 1437 ~p~~Ll~~~~s~f 1449 (1470)
+++++++++...+
T Consensus 239 ~~~~~~~~~~~~~ 251 (261)
T PRK14263 239 PTAQIFQNPREQL 251 (261)
T ss_pred CHHHHHhCCCcHH
Confidence 9999987654333
No 270
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=6.7e-38 Score=354.72 Aligned_cols=211 Identities=26% Similarity=0.421 Sum_probs=184.2
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+. +++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++|
T Consensus 1 i~i~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGS--FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECC--eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 578999999974 359999999999999999999999999999999999999999999999999987553 4789999
Q ss_pred EccCCCCCcc-cHHHhcCcCC---CC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQG-TVRTNLDPLE---QH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp~~---~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||+|.+|.+ |+++|+.... .. .++++.++++..++.+...+. ..+||+||+||++||||+
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~laral 145 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRY-----------PNQLSGGQRQRVALARAL 145 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHHHHHHHHH
Confidence 9999999976 9999996321 11 234567788888876554332 247999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1445 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~ 1445 (1470)
+++|++++|||||++||.++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|+++|.|+++++++.+
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~~ 222 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDHP 222 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcCC
Confidence 999999999999999999999999999987543 7999999999999876 9999999999999999999998643
No 271
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.3e-38 Score=372.71 Aligned_cols=212 Identities=26% Similarity=0.420 Sum_probs=183.8
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|+. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.|+...+ ...|++++
T Consensus 41 ~i~i~nl~k~y~~--~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGD--KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 5999999999964 35999999999999999999999999999999999999999999999999997654 56889999
Q ss_pred EEccCCCCC-cccHHHhcCcCC---CCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1299 IIPQDPMLF-QGTVRTNLDPLE---QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1299 iIpQdp~LF-~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
|+||++.++ ..|+++|+..+. ..+. +.+.++++.+++.+ ..+..+ .+||+|||||++||||
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~-------~~~~~~----~~LS~G~kqrv~lA~a 186 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-------KADARV----SDLSGGMKRRLTLARA 186 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-------hhCCCh----hhCCHHHHHHHHHHHH
Confidence 999999887 459999996422 1222 23445566666543 345555 3699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
|+++|++|+|||||++||+.+...+.+.|++.. +++|||++||+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999999864 47999999999999976 999999999999999999999764
No 272
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-38 Score=357.32 Aligned_cols=219 Identities=25% Similarity=0.413 Sum_probs=188.2
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCC-CCCHHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDIS-MIGLQD 1292 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~-~i~l~~ 1292 (1470)
.++++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4889999999963 4599999999999999999999999999999999999986 5999999999986 455677
Q ss_pred HhcccEEEccCCCCCcccHHHhcCcC---CCC-C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1293 LRSRLSIIPQDPMLFQGTVRTNLDPL---EQH-S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1293 LR~~isiIpQdp~LF~gTIR~NLdp~---~~~-s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
+|+.++|+||+|.+|.+|+++|+... ... . ++++.++++.+++.+.+. +.++. ....||+|||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~----~~~~LS~G~~qr 153 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK---DRLKS----HAFGLSGGQQQR 153 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh---HHhhc----CcccCCHHHHHH
Confidence 89999999999999999999999632 111 1 234566777777765432 12233 345799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
++|||||+++|+||+|||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFS 233 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999988777999999999999887 99999999999999999999876
Q ss_pred cCC
Q 000475 1444 DNS 1446 (1470)
Q Consensus 1444 ~~~ 1446 (1470)
++.
T Consensus 234 ~~~ 236 (249)
T PRK14253 234 NPK 236 (249)
T ss_pred CCC
Confidence 543
No 273
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-38 Score=363.44 Aligned_cols=212 Identities=28% Similarity=0.429 Sum_probs=182.7
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCC--CCCHHHHhccc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDIS--MIGLQDLRSRL 1297 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~--~i~l~~LR~~i 1297 (1470)
|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 689999999963 35999999999999999999999999999999999999999999999999985 33456788999
Q ss_pred EEEccCCC--CCcccHHHhcCcC---CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1298 SIIPQDPM--LFQGTVRTNLDPL---EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1298 siIpQdp~--LF~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
+|+||+|. ++..|+.+|+... ...++ +++.++++.+++.++. +.+ ..+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~LSgG~~qrl~la 148 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-------HQP----IQCLSHGQKKRVAIA 148 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-------cCC----chhCCHHHHHHHHHH
Confidence 99999985 5778999998632 11222 3456678888876543 333 357999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
|||+.+|+||+|||||++||+.+...+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|++++++++
T Consensus 149 raL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 149 GALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998864 47899999999999965 999999999999999999998764
No 274
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-38 Score=358.48 Aligned_cols=223 Identities=24% Similarity=0.372 Sum_probs=187.2
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCC-----CcEEEEcCEeCCC--CCHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS-----GGRILIDGVDISM--IGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~-----~G~I~IDG~dI~~--i~l~ 1291 (1470)
-++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 3789999999963 35999999999999999999999999999999999999874 8999999999975 3455
Q ss_pred HHhcccEEEccCCCCCcc-cHHHhcCcC---CC-CCHHH----HHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000475 1292 DLRSRLSIIPQDPMLFQG-TVRTNLDPL---EQ-HSDQE----IWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1362 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~g-TIR~NLdp~---~~-~sd~e----I~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQr 1362 (1470)
.+|++++|+||+|.+|.+ |+++|+... .. ..+++ ..+.++..++.+.+ ++.++.+ ..+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~----~~~LS~G~~ 154 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLKTP----ATGLSGGQQ 154 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhcCC----cccCCHHHH
Confidence 788999999999999885 999999631 11 12333 33344555554332 2334444 457999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000475 1363 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1441 (1470)
Q Consensus 1363 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~L 1441 (1470)
||++|||||+++|+||+|||||++||..+...+.+.|++..+++|+|+++|+++.+.+ ||||++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 155 QRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667999999999999986 999999999999999999999
Q ss_pred hhcCCChHH
Q 000475 1442 LEDNSSSFS 1450 (1470)
Q Consensus 1442 l~~~~s~f~ 1450 (1470)
++++...+.
T Consensus 235 ~~~~~~~~~ 243 (252)
T PRK14272 235 FTNPRDERT 243 (252)
T ss_pred HhCcCcHHH
Confidence 887655553
No 275
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.6e-38 Score=352.57 Aligned_cols=197 Identities=29% Similarity=0.438 Sum_probs=169.7
Q ss_pred EEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEE
Q 000475 1221 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSII 1300 (1470)
Q Consensus 1221 ~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiI 1300 (1470)
+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 36899999964 35999999999999999999999999999999999999999999999998774 578899999
Q ss_pred ccCCCC---CcccHHHhcCcCCC-----------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000475 1301 PQDPML---FQGTVRTNLDPLEQ-----------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1301 pQdp~L---F~gTIR~NLdp~~~-----------~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
||+|.+ |..|+++|+..... ..++++.++++.+++.+.... . ..+||||||||++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~----~~~LSgG~~qrv~ 142 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADR-------Q----IGELSGGQQQRVL 142 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhC-------C----cccCCHHHHHHHH
Confidence 999976 56899999863211 123467888899888765433 2 2469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
|||||+++|++|+|||||++||+++...+.+.|++.. +++|||+|||+++.+.. ||+|++|++| +++.|
T Consensus 143 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 143 LARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999998864 67899999999999976 9999999986 55544
No 276
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=5.4e-38 Score=361.58 Aligned_cols=226 Identities=26% Similarity=0.380 Sum_probs=188.6
Q ss_pred cEEEEeEEEEeCC-------CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHH
Q 000475 1219 KIELENLLVQYNP-------TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~-------~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~ 1291 (1470)
.|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 4899999999952 123699999999999999999999999999999999999999999999999999865666
Q ss_pred HHhcccEEEccCCC--CCcc-cHHHhcCc---CC-C----CCHHHHHHHHHHcCcH-HHHHhcccccCccccCCCCCCCh
Q 000475 1292 DLRSRLSIIPQDPM--LFQG-TVRTNLDP---LE-Q----HSDQEIWEVINKCHLA-EIVRQDQRLLDAPVAEDGENWSV 1359 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~--LF~g-TIR~NLdp---~~-~----~sd~eI~~aL~~~~L~-~~v~~lp~gLdt~v~e~G~nLSg 1359 (1470)
..|++++|+||+|. ++.. |+.+|+.. .. . ..++++.++++.+++. +.. +.. ..+||+
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~----~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHA-------SYY----PHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHH-------hcC----chhcCH
Confidence 66778999999985 4444 78888742 11 1 1235678889998883 332 222 246999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1360 GQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1360 GQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
|||||++|||||+++|+||+|||||++||+++...+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999864 37899999999999987 9999999999999999
Q ss_pred ChhHHhhcCCC-hHHHHHHH
Q 000475 1437 SPRQLLEDNSS-SFSKLVAE 1455 (1470)
Q Consensus 1437 ~p~~Ll~~~~s-~f~~lv~~ 1455 (1470)
+++++.+++.. .+++++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~ 252 (267)
T PRK15112 233 STADVLASPLHELTKRLIAG 252 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHh
Confidence 99999876533 34455544
No 277
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=5e-38 Score=367.50 Aligned_cols=211 Identities=23% Similarity=0.355 Sum_probs=186.3
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
++++|++++|++ ..+|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999963 459999999999999999999999999999999999999999999999999987 44678999999
Q ss_pred EccCCCCCcc-cHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQG-TVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||+|.+|.+ |+++|+.... ..+ .+++.++++..++.+.. |. ...+||+|||||++|||||
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~~----~~~~LS~G~~qrv~la~al 148 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQ-------HK----KIGQLSKGYRQRVGLAQAL 148 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHh-------cC----chhhCCHHHHHHHHHHHHH
Confidence 9999999977 9999996321 122 34566777777775543 22 2357999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
+++|++|+|||||++||+.+.+.+++.|++..+++|||+++|+++.+.. ||||++|++|++++.|+++++.++
T Consensus 149 ~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 149 IHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999988778999999999999977 999999999999999999998764
No 278
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-38 Score=362.63 Aligned_cols=213 Identities=27% Similarity=0.442 Sum_probs=183.9
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCC--CCHHHHhccc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM--IGLQDLRSRL 1297 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~--i~l~~LR~~i 1297 (1470)
|+++|++++|+.+ +++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 6899999999633 359999999999999999999999999999999999999999999999999853 2345688999
Q ss_pred EEEccCC--CCCcccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1298 SIIPQDP--MLFQGTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1298 siIpQdp--~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
+|+||+| .+|..|+++|+... ...+ .+++.++++.+++.++. |..+ ..||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-------~~~~----~~LS~Gq~qrv~la 149 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFE-------NKPP----HHLSGGQKKRVAIA 149 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhh-------cCCh----hhCCHHHHHHHHHH
Confidence 9999998 57889999999631 1122 24567788888876443 3332 46999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
||++++|++|+|||||++||+.+...+.+.|++.. ++.|||+++|+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 150 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 150 GILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999864 47899999999999875 999999999999999999998763
No 279
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-38 Score=369.62 Aligned_cols=226 Identities=20% Similarity=0.343 Sum_probs=188.5
Q ss_pred cEEEEeEEEEeCC--CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC----CCCcEEEEcCEeCCCCCHHH
Q 000475 1219 KIELENLLVQYNP--TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE----PSGGRILIDGVDISMIGLQD 1292 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~--~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~----p~~G~I~IDG~dI~~i~l~~ 1292 (1470)
-++++|++++|+. +...+++||||+|++||.+||+|+||||||||+++|.|+.+ |++|+|.+||.|+.+++.++
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3789999999953 22359999999999999999999999999999999999986 58999999999999888776
Q ss_pred Hh----cccEEEccCCC--CCc-ccHHHhcC-cC------CC------CCHHHHHHHHHHcCcHHHHHhcccccCccccC
Q 000475 1293 LR----SRLSIIPQDPM--LFQ-GTVRTNLD-PL------EQ------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAE 1352 (1470)
Q Consensus 1293 LR----~~isiIpQdp~--LF~-gTIR~NLd-p~------~~------~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e 1352 (1470)
++ ++|++|||+|. ++. -||.+|+. +. +. ..++++.++|+.++|.+.-. -++.
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~----~~~~---- 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKD----AMRS---- 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHH----HHhC----
Confidence 53 47999999996 333 48888874 11 10 11346778899998864211 1122
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeC
Q 000475 1353 DGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDE 1429 (1470)
Q Consensus 1353 ~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~ 1429 (1470)
....||||||||++|||||+.+|+||||||||++||+.+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 2347999999999999999999999999999999999999999999998653 7899999999999976 999999999
Q ss_pred CEEEEecChhHHhhcCCChHHHH
Q 000475 1430 GKVLEYDSPRQLLEDNSSSFSKL 1452 (1470)
Q Consensus 1430 G~vvE~g~p~~Ll~~~~s~f~~l 1452 (1470)
|+|+|.|+++++++++...|.+.
T Consensus 235 G~ive~g~~~~i~~~p~~~y~~~ 257 (330)
T PRK15093 235 GQTVETAPSKELVTTPHHPYTQA 257 (330)
T ss_pred CEEEEECCHHHHHhCCCCHHHHH
Confidence 99999999999998776677653
No 280
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-38 Score=358.62 Aligned_cols=213 Identities=22% Similarity=0.386 Sum_probs=182.1
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHH-hccc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL-RSRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~i 1297 (1470)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5899999999963 359999999999999999999999999999999999999999999999999998876664 4569
Q ss_pred EEEccCCCCCcc-cHHHhcCcCCC-------------------C---CHHHHHHHHHHcCcHHHHHhcccccCccccCCC
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPLEQ-------------------H---SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDG 1354 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~~~-------------------~---sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G 1354 (1470)
+++||+|.+|.+ |+++|+..... . ..+++.+.++..++.+. .....
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~ 151 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEH-----------ANRQA 151 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhh-----------hhCCh
Confidence 999999999986 99999874210 0 01234455555555432 23344
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCE
Q 000475 1355 ENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGK 1431 (1470)
Q Consensus 1355 ~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~ 1431 (1470)
.+||+|||||++||||++++|++|+|||||++||+.+...+.+.|++..+ ++|||+++|+++.+.+ ||+|++|++|+
T Consensus 152 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 231 (255)
T PRK11300 152 GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGT 231 (255)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 67999999999999999999999999999999999999999999987642 7899999999999976 99999999999
Q ss_pred EEEecChhHHhhc
Q 000475 1432 VLEYDSPRQLLED 1444 (1470)
Q Consensus 1432 vvE~g~p~~Ll~~ 1444 (1470)
+++.|+++++.++
T Consensus 232 i~~~~~~~~~~~~ 244 (255)
T PRK11300 232 PLANGTPEEIRNN 244 (255)
T ss_pred EEecCCHHHHhhC
Confidence 9999999998753
No 281
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=351.37 Aligned_cols=208 Identities=24% Similarity=0.394 Sum_probs=183.3
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++||+++|+. . ..|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .+++++|
T Consensus 2 l~~~~l~~~~~~-~---~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHH-L---PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECC-c---cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 689999999963 2 249999999999999999999999999999999999999999999999987644 3678999
Q ss_pred EccCCCCCcc-cHHHhcCc-CCC------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQG-TVRTNLDP-LEQ------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp-~~~------~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||+|.+|.+ |+++|+.. +.. ..++++.++++.+++.+.+...| ..||+|||||++||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral 144 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARCL 144 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999986 99999973 211 12456888999999987765544 36999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
+++|++++|||||++||+++.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999988643 7899999999999876 999999999999999999999864
No 282
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-38 Score=365.45 Aligned_cols=220 Identities=27% Similarity=0.477 Sum_probs=189.5
Q ss_pred CCcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEEcCEeCCCC--C
Q 000475 1217 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISMI--G 1289 (1470)
Q Consensus 1217 ~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~i--~ 1289 (1470)
...|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++... +
T Consensus 43 ~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 43 DAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred CceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 446999999999964 359999999999999999999999999999999999986 6899999999998753 4
Q ss_pred HHHHhcccEEEccCCCCCcccHHHhcCcC-C-------------------CCCHHHHHHHHHHcCcHHHHHhcccccCcc
Q 000475 1290 LQDLRSRLSIIPQDPMLFQGTVRTNLDPL-E-------------------QHSDQEIWEVINKCHLAEIVRQDQRLLDAP 1349 (1470)
Q Consensus 1290 l~~LR~~isiIpQdp~LF~gTIR~NLdp~-~-------------------~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~ 1349 (1470)
...+|++++|+||++.+|.+|+++|+... . +..++++.++++.+++.+.+. ..
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVN-------DR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhh-------HH
Confidence 66789999999999999999999999631 0 012345777888887754332 23
Q ss_pred ccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEE-EEE
Q 000475 1350 VAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLV-LVL 1427 (1470)
Q Consensus 1350 v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrI-lvL 1427 (1470)
......+||||||||++|||||+++|+||||||||++||+.+...+.+.|++..++.|||+|+|+++.+.. ||+| ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 34456789999999999999999999999999999999999999999999988777899999999999876 9997 578
Q ss_pred eCCEEEEecChhHHhhcC
Q 000475 1428 DEGKVLEYDSPRQLLEDN 1445 (1470)
Q Consensus 1428 ~~G~vvE~g~p~~Ll~~~ 1445 (1470)
++|++++.|+++++.+++
T Consensus 274 ~~G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 274 TGGELVEYDDTDKIFENP 291 (305)
T ss_pred cCCEEEEeCCHHHHHhCc
Confidence 999999999999998654
No 283
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-38 Score=362.97 Aligned_cols=223 Identities=24% Similarity=0.371 Sum_probs=188.4
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEEcCEeCCCC--CH
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISMI--GL 1290 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~i--~l 1290 (1470)
..|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... ..
T Consensus 38 ~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 38 PHVVAKNFSIYYGE--FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred eEEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 35899999999964 359999999999999999999999999999999999865 4999999999998653 33
Q ss_pred HHHhcccEEEccCCCCCcccHHHhcCcC---CCC-C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000475 1291 QDLRSRLSIIPQDPMLFQGTVRTNLDPL---EQH-S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1362 (1470)
Q Consensus 1291 ~~LR~~isiIpQdp~LF~gTIR~NLdp~---~~~-s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQr 1362 (1470)
..+|++++|+||+|.+|.+|+++|+... ... + ++++.++++..++.+.+. +.++. ....||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~~----~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS---DRLDK----NALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh---hHhhC----ChhhCCHHHH
Confidence 4678999999999999989999999632 111 1 234667777777654322 22333 3457999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000475 1363 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1441 (1470)
Q Consensus 1363 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~L 1441 (1470)
||++|||||+++|++|||||||++||+++...+.+.|++..+++|||+++|+++.+.+ ||+|++|++|++++.|++.++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~ 268 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQL 268 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667899999999999876 999999999999999999999
Q ss_pred hhcCCChH
Q 000475 1442 LEDNSSSF 1449 (1470)
Q Consensus 1442 l~~~~s~f 1449 (1470)
.+++...+
T Consensus 269 ~~~~~~~~ 276 (286)
T PRK14275 269 FTNPKDRM 276 (286)
T ss_pred HhCCCcHH
Confidence 87655444
No 284
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-38 Score=357.82 Aligned_cols=222 Identities=24% Similarity=0.381 Sum_probs=188.1
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC--C---CCcEEEEcCEeCCC--CCHH
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE--P---SGGRILIDGVDISM--IGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~--p---~~G~I~IDG~dI~~--i~l~ 1291 (1470)
.|+++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+.+ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999964 459999999999999999999999999999999999975 4 58999999999964 3455
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcC---CCC-C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPL---EQH-S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~---~~~-s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
.+|++++|+||+|.+|..|+++|+... ... . ++++.++++.+++.+.+. ........+||+||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~Gq~q 155 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVK-------DHLHESALSLSGGQQQ 155 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchh-------hHHhcCcccCCHHHHH
Confidence 678899999999999999999999631 111 1 345666777777654332 1123344679999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
|++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|++.+..
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 156 RVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987667899999999999976 9999999999999999999998
Q ss_pred hcCCChH
Q 000475 1443 EDNSSSF 1449 (1470)
Q Consensus 1443 ~~~~s~f 1449 (1470)
.++...+
T Consensus 236 ~~~~~~~ 242 (252)
T PRK14255 236 LNPKEKE 242 (252)
T ss_pred cCCCChH
Confidence 7665444
No 285
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=9.1e-38 Score=351.95 Aligned_cols=207 Identities=26% Similarity=0.407 Sum_probs=172.4
Q ss_pred EEEEeEEEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCH---HHHh
Q 000475 1220 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL---QDLR 1294 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~--~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l---~~LR 1294 (1470)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68999999996431 269999999999999999999999999999999999999999999999999988763 5788
Q ss_pred cccEEEccCC--CCC-cccHHHhcCc----CC-CCCHHHH----HHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000475 1295 SRLSIIPQDP--MLF-QGTVRTNLDP----LE-QHSDQEI----WEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1362 (1470)
Q Consensus 1295 ~~isiIpQdp--~LF-~gTIR~NLdp----~~-~~sd~eI----~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQr 1362 (1470)
++++|+||+| .++ ..|+++|+.. .. ...+++. .+.++..++.+ ........+||||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~ 151 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPE----------EVLNRYPHELSGGQR 151 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCCh----------hHhhCCchhcCHHHH
Confidence 9999999999 344 4699999852 11 1112211 24555555521 112233467999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1363 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1363 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
||++|||||+++|+||+|||||++||+++...+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|
T Consensus 152 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 152 QRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999999998653 7899999999999874 9999999999998765
No 286
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=7.2e-38 Score=358.73 Aligned_cols=211 Identities=27% Similarity=0.413 Sum_probs=185.3
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
++++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 689999999964 359999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EccCCC-CCcccHHHhcCcCC----C-------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHH
Q 000475 1300 IPQDPM-LFQGTVRTNLDPLE----Q-------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCL 1367 (1470)
Q Consensus 1300 IpQdp~-LF~gTIR~NLdp~~----~-------~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1367 (1470)
+||+|. .+..|+++|+.... . ..++++.++++.+++.+.. |.. ...||+|||||++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~LS~G~~qrl~l 148 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLA-------DRD----MSTLSGGERQRVHV 148 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhh-------cCC----cccCCHHHHHHHHH
Confidence 999985 45679999995421 0 1234578888888886543 222 34699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1368 ARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1368 ARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
|||++.+|++++|||||++||+.+...+.+.|++.. ++.|||+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 149 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 149 ARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 999999999999999999999999999999998764 36899999999999955 99999999999999999998865
No 287
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.2e-37 Score=349.39 Aligned_cols=202 Identities=27% Similarity=0.377 Sum_probs=174.3
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH---Hhcc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---LRSR 1296 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR~~ 1296 (1470)
|+++|++++|+++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++.+. +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999533 46999999999999999999999999999999999999999999999999998876544 6889
Q ss_pred cEEEccCCCCC-cccHHHhcCcC---CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1297 LSIIPQDPMLF-QGTVRTNLDPL---EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1297 isiIpQdp~LF-~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
++|+||+|.+| ..|+++|+... ...++ +++.++++..++.+...+. ..+||+|||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la 149 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNF-----------PIQLSGGEQQRVGIA 149 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------chhCCHHHHHHHHHH
Confidence 99999999874 66999999642 12232 2456778888776554332 357999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVL 1433 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vv 1433 (1470)
||++++|++|+|||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 150 RAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEc
Confidence 99999999999999999999999999999999763 47899999999999976 8999999999985
No 288
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-38 Score=349.87 Aligned_cols=200 Identities=26% Similarity=0.459 Sum_probs=172.7
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
++++|++++|+. .++++|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 578999999963 359999999999999999999999999999999999999999999999998753 56889999
Q ss_pred EccCCCCCcc-cHHHhcCcCC---CC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQG-TVRTNLDPLE---QH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp~~---~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||++.+|.+ |+++|+.... .. .++++.++++..++.+.... ...+||+|||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la~al 143 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANK-----------RVEELSKGNQQKVQFIAAV 143 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhC-----------cHhhCCHHHHHHHHHHHHH
Confidence 9999999876 9999985321 11 13456667777777554322 2357999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
+++|++|+|||||++||+.+.+.+.+.|++.. +++|||+++|+++.+.. ||++++|++|++++.|
T Consensus 144 ~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 144 IHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999998764 47899999999999876 9999999999998865
No 289
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=7.9e-38 Score=371.76 Aligned_cols=206 Identities=21% Similarity=0.322 Sum_probs=177.5
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCE----eCCCCCHHHH---h-cccEEEccCCC
Q 000475 1234 PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGV----DISMIGLQDL---R-SRLSIIPQDPM 1305 (1470)
Q Consensus 1234 ~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~----dI~~i~l~~L---R-~~isiIpQdp~ 1305 (1470)
..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. |+...+.+.+ | ++++|+||++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35899999999999999999999999999999999999999999999996 6777766554 3 58999999999
Q ss_pred CCc-ccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000475 1306 LFQ-GTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRI 1377 (1470)
Q Consensus 1306 LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1377 (1470)
+|+ .|+++|+... ...+ .+...++++.++|.++....| .+||||||||++|||||+++|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 997 6999999632 1122 235678888888876543332 36999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHH
Q 000475 1378 LVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFS 1450 (1470)
Q Consensus 1378 LlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~ 1450 (1470)
|+||||||+||+.+...+++.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|++++.++...|.
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~ 261 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYV 261 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHH
Confidence 999999999999999999999988653 7899999999999865 999999999999999999999977655443
No 290
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.2e-37 Score=347.06 Aligned_cols=201 Identities=23% Similarity=0.399 Sum_probs=176.5
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
++++|++++|+. +++|+||++++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ ..|++++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999963 468999999999999999999999999999999999999999999999997643 46889999
Q ss_pred EccCCCCCcc-cHHHhcCc-CC---C---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQG-TVRTNLDP-LE---Q---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp-~~---~---~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||+|.+|.+ |+++|+.. .. . ..++++.++++..++.+...+.| .+||+|||||++||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 143 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARCL 143 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999875 99999862 21 1 13456788999999877655444 36999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecC
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDS 1437 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~ 1437 (1470)
+++|+|++|||||++||.++...+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 99999999999999999999999999999864 37899999999999876 99999999999999874
No 291
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7.8e-38 Score=346.80 Aligned_cols=199 Identities=30% Similarity=0.420 Sum_probs=169.2
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++|+|+. .+.+++ ||++++|++++|+|||||||||||++|+|.++|.+|++ .++|
T Consensus 2 ~L~~~~ls~~y~~--------~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V-~l~g~~i~~~~~k 72 (258)
T COG1120 2 MLEVENLSFGYGG--------KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEV-LLDGKDIASLSPK 72 (258)
T ss_pred eeEEEEEEEEECC--------eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEE-EECCCchhhcCHH
Confidence 4789999999974 478999 99999999999999999999999999999999999997 8888
Q ss_pred ----EeEEEcCCCCC-CCccHHHHHhcCCCC-----------CHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCch
Q 000475 660 ----KKAYVPQSSWI-QTGTIRENILFGKDM-----------RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1470)
Q Consensus 660 ----~~ayv~Q~~~i-~~~Ti~eNI~~g~~~-----------~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 723 (1470)
.+|||||++.. +..||+|-+.+|+.- |++..+++++.+++.+-. ++...+|||
T Consensus 73 elAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-----------~r~~~~LSG 141 (258)
T COG1120 73 ELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-----------DRPVDELSG 141 (258)
T ss_pred HHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-----------cCcccccCh
Confidence 47999999765 567999999999631 222344456666655432 245678999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchh-hhcCEEEEEeCCEEEEec
Q 000475 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFL-DAADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l-~~~d~i~~l~~G~i~~~g 801 (1470)
||||||.|||||.++|+|+|||||||+||.....++++.+.+.. .+|+|+|+|+||++.. ..||++++|++|+++.+|
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G 221 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQG 221 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeec
Confidence 99999999999999999999999999999999999987544333 3489999999999986 569999999999999999
Q ss_pred ChhhHHh
Q 000475 802 KYEDLIA 808 (1470)
Q Consensus 802 ~~~~l~~ 808 (1470)
+++|.+.
T Consensus 222 ~p~evlT 228 (258)
T COG1120 222 TPEEVLT 228 (258)
T ss_pred CcchhcC
Confidence 9999886
No 292
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-37 Score=342.16 Aligned_cols=198 Identities=33% Similarity=0.507 Sum_probs=167.0
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1470)
..|+++|++|+|+.+ +.|+| ||++++|++++|+||||||||||+|+|+|.++|.+|++ .+.|
T Consensus 3 ~~i~v~nl~v~y~~~--------~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i-~~~g~~~~~~~~ 73 (254)
T COG1121 3 PMIEVENLTVSYGNR--------PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEI-KIFGKPVRKRRK 73 (254)
T ss_pred cEEEEeeeEEEECCE--------eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceE-EEcccccccccc
Confidence 358999999999742 58999 99999999999999999999999999999999999997 6544
Q ss_pred --EeEEEcCC---CCCCCccHHHHHhcCCCCC-----------HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCch
Q 000475 660 --KKAYVPQS---SWIQTGTIRENILFGKDMR-----------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1470)
Q Consensus 660 --~~ayv~Q~---~~i~~~Ti~eNI~~g~~~~-----------~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 723 (1470)
+||||||. .|-|..||+|-+.+|.... .+..+++++..++.+ + ...+-.+|||
T Consensus 74 ~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~-~----------~~r~i~~LSG 142 (254)
T COG1121 74 RLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMED-L----------RDRQIGELSG 142 (254)
T ss_pred CCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchh-h----------hCCcccccCc
Confidence 59999995 5678899999999985332 355666677666652 2 2245668999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEec
Q 000475 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g 801 (1470)
||+|||-|||||.++||+++|||||+++|+.++..+++ ++..+. +|+||++||||++.+. .+|+|+.|+ +++...|
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~-lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G 220 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYD-LLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASG 220 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEecc
Confidence 99999999999999999999999999999999888876 555554 4899999999999876 599999985 4677889
Q ss_pred ChhhHHh
Q 000475 802 KYEDLIA 808 (1470)
Q Consensus 802 ~~~~l~~ 808 (1470)
++++..+
T Consensus 221 ~~~~~~~ 227 (254)
T COG1121 221 PPEEVLT 227 (254)
T ss_pred ChhhccC
Confidence 9999875
No 293
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=7.6e-38 Score=348.84 Aligned_cols=200 Identities=29% Similarity=0.464 Sum_probs=172.5
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCC--CCHHHHhccc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM--IGLQDLRSRL 1297 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~--i~l~~LR~~i 1297 (1470)
|+++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 578999999964 359999999999999999999999999999999999999999999999999853 3456788999
Q ss_pred EEEccCCCCCc-ccHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000475 1298 SIIPQDPMLFQ-GTVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1298 siIpQdp~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1368 (1470)
+|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+..... ..+||+|||||++||
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la 147 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAY-----------PAQLSGGQQQRVAIA 147 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhC-----------ccccCHHHHHHHHHH
Confidence 99999999886 5999999642 1222 23466777777776544332 257999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEE
Q 000475 1369 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKV 1432 (1470)
Q Consensus 1369 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~v 1432 (1470)
||++++|++|+|||||++||+++.+.+.+.|++.. .++|||+++|+++.+.+ ||+|++|++|++
T Consensus 148 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 148 RALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999764 47899999999999976 999999999975
No 294
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.9e-37 Score=355.61 Aligned_cols=221 Identities=21% Similarity=0.364 Sum_probs=182.7
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEe-----CCCCCHHH-
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVD-----ISMIGLQD- 1292 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~d-----I~~i~l~~- 1292 (1470)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5899999999964 359999999999999999999999999999999999999999999999999 87776654
Q ss_pred ---HhcccEEEccCCC--CCc-ccHHHhcCc----CCCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCC
Q 000475 1293 ---LRSRLSIIPQDPM--LFQ-GTVRTNLDP----LEQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWS 1358 (1470)
Q Consensus 1293 ---LR~~isiIpQdp~--LF~-gTIR~NLdp----~~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS 1358 (1470)
.|+.++|+||+|. ++. .|+++|+.. +.... ++++.++++..++.+ ......+.+||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS 153 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDA----------ARIDDLPTTFS 153 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCCh----------hHHhCCCccCC
Confidence 3568999999984 333 478888741 22111 223445555555421 12334557899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000475 1359 VGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEY 1435 (1470)
Q Consensus 1359 gGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~ 1435 (1470)
||||||++|||||+++|+||+|||||++||+.+.+.+.+.|++..+ +.|||+|+|+++.+.+ ||+|++|++|++++.
T Consensus 154 ~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~ 233 (258)
T PRK11701 154 GGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVES 233 (258)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999987643 7899999999999975 999999999999999
Q ss_pred cChhHHhhcCCChHHH
Q 000475 1436 DSPRQLLEDNSSSFSK 1451 (1470)
Q Consensus 1436 g~p~~Ll~~~~s~f~~ 1451 (1470)
|+++++.+++...|.+
T Consensus 234 ~~~~~~~~~~~~~~~~ 249 (258)
T PRK11701 234 GLTDQVLDDPQHPYTQ 249 (258)
T ss_pred CCHHHHhcCCCCHHHH
Confidence 9999998766544544
No 295
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.7e-38 Score=362.49 Aligned_cols=213 Identities=29% Similarity=0.509 Sum_probs=189.4
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++.+|..+ ..+|+||||+|++||.+|++||||||||||+++|.|+++|++|+|.++|.|...- ....|+++|
T Consensus 4 ~i~~~~l~k~~~~~-~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGGD-KTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCCC-CEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 47889999999732 3599999999999999999999999999999999999999999999999998765 678999999
Q ss_pred EEccCCCCCcc-cHHHhcCcCC-------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1299 IIPQDPMLFQG-TVRTNLDPLE-------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp~~-------~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
|+||+|.+++. |++|||+.+. ...++.+.+.++..+|.+.- +.++ ..||+|||||+.||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-------~~~~----~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-------NKKV----RTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-------Ccch----hhcCHHHHHHHHHHHH
Confidence 99999998877 9999998532 12356788999999987621 2333 4699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-C-cEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREETS-R-CTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~-~-~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
|+.+|++|+|||||++||+.+...+.+.|++..+ + +||++.||.++.+.. ||||++|++|+++.+|+++++.+.
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999998765 4 799999999999988 999999999999999999998654
No 296
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-37 Score=354.66 Aligned_cols=224 Identities=27% Similarity=0.421 Sum_probs=188.7
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEc------CEeCCCCCHH
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILID------GVDISMIGLQ 1291 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~ID------G~dI~~i~l~ 1291 (1470)
..|+++|++++|+. .++|+|+||++++||++||+|++|||||||+++|.|+++|++|+|.++ |.++.+.+..
T Consensus 9 ~~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 9 DVFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred hheeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 35899999999964 459999999999999999999999999999999999999998666655 4677777777
Q ss_pred HHhcccEEEccCCCCCcc-cHHHhcCcC----CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000475 1292 DLRSRLSIIPQDPMLFQG-TVRTNLDPL----EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1362 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~g-TIR~NLdp~----~~~sd~----eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQr 1362 (1470)
.+|++++|+||+|.+|.+ |+++|+... +...++ .+.++++..++.+.+.. .....+..||+|||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYD-------RLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchh-------hhcCCcccCCHHHH
Confidence 889999999999999976 999999732 111222 34667777777543311 12234567999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000475 1363 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1441 (1470)
Q Consensus 1363 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~L 1441 (1470)
||++||||++++|++++|||||++||..+...+.+.|++..+++|||++||+++.+.. ||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999987778999999999999955 999999999999999999999
Q ss_pred hhcCCChHH
Q 000475 1442 LEDNSSSFS 1450 (1470)
Q Consensus 1442 l~~~~s~f~ 1450 (1470)
.+++...+.
T Consensus 240 ~~~~~~~~~ 248 (257)
T PRK14246 240 FTSPKNELT 248 (257)
T ss_pred HhCCCcHHH
Confidence 876654454
No 297
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=9.5e-38 Score=365.61 Aligned_cols=203 Identities=25% Similarity=0.419 Sum_probs=177.0
Q ss_pred EeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCC
Q 000475 1228 QYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLF 1307 (1470)
Q Consensus 1228 ~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF 1307 (1470)
+|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4642 359999999999999999999999999999999999999999999999999976 3456789999999999999
Q ss_pred cc-cHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000475 1308 QG-TVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILV 1379 (1470)
Q Consensus 1308 ~g-TIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILl 1379 (1470)
.. |+++|+.... ..+ ++++.++++.+++.+.. +..+ .+||||||||++|||||+++|++|+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LSgG~~qrv~la~al~~~p~lll 147 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGEAA-------DRPV----GTYSGGMRRRLDIAASLIHQPDVLF 147 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-------CCch----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 76 9999996421 122 34577888888886543 3333 4699999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1380 LDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1380 LDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
|||||++||+.+.+.+.+.|++.. +++|||+++|+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 148 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 148 LDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999999998864 47899999999999976 999999999999999999998764
No 298
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.4e-37 Score=353.91 Aligned_cols=223 Identities=23% Similarity=0.329 Sum_probs=184.8
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC----CCcEEEEcCEeCCCCCHHHHh
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP----SGGRILIDGVDISMIGLQDLR 1294 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p----~~G~I~IDG~dI~~i~l~~LR 1294 (1470)
.|+++|++++| + .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..+
T Consensus 4 ~l~~~~l~~~~--~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA--A-QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe--c-cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 58999999999 2 3599999999999999999999999999999999999999 999999999998632 2234
Q ss_pred cccEEEccCCC-CCc--ccHHHhcCc----CC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000475 1295 SRLSIIPQDPM-LFQ--GTVRTNLDP----LE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1295 ~~isiIpQdp~-LF~--gTIR~NLdp----~~-~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
++++|+||+|. .|. .|+.+|+.. .+ ...+++++++++.+++.+. ++.+......||+|||||++
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv~ 150 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRMM 150 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHHH
Confidence 67999999985 443 477777531 11 2345678888998887542 11223344679999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+++|+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 151 laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 151 IALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999999998643 7899999999999875 99999999999999999999987
Q ss_pred cCCC-hHHHHHH
Q 000475 1444 DNSS-SFSKLVA 1454 (1470)
Q Consensus 1444 ~~~s-~f~~lv~ 1454 (1470)
++.. .++.++.
T Consensus 231 ~~~~~~~~~~~~ 242 (254)
T PRK10418 231 APKHAVTRSLVS 242 (254)
T ss_pred CCCCHHHHHHHH
Confidence 6554 3444443
No 299
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=9.1e-37 Score=351.66 Aligned_cols=231 Identities=36% Similarity=0.622 Sum_probs=198.1
Q ss_pred HHHHHhcccCCCCCCCCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHH
Q 000475 565 RIQEFIKEDNQKKPITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSI 643 (1470)
Q Consensus 565 Ri~~fL~~~e~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~l 643 (1470)
.+.+.|..+.+++... +.......++++|+++.+ .+.+++ ||++++|++++|+|+||||||||+++|
T Consensus 16 ~~~~~~~~~~~~~~~~--~~~~~~~~l~i~nls~~~----------~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I 83 (282)
T cd03291 16 GFGELLEKAKQENNDR--KHSSDDNNLFFSNLCLVG----------APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLI 83 (282)
T ss_pred HHHHHHhccccccccc--ccCCCCCeEEEEEEEEec----------ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 4555565544332222 223345679999999962 247888 999999999999999999999999999
Q ss_pred hCCCcCCCCcEEEECCEeEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCch
Q 000475 644 LGEIPRISGAAIKVHGKKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1470)
Q Consensus 644 lG~~~~~~G~~i~~~g~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 723 (1470)
+|.++|.+|++ .++|.++|++|++++++.|++||+.++......++.+.++++++.+.++.++.+..+.+++++.+|||
T Consensus 84 ~Gl~~p~~G~I-~i~g~i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSg 162 (282)
T cd03291 84 LGELEPSEGKI-KHSGRISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSG 162 (282)
T ss_pred hCCCCCCCcEE-EECCEEEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCH
Confidence 99999999997 89999999999999998999999999865555566777888888888889999888889999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecCh
Q 000475 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKY 803 (1470)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~ 803 (1470)
|||||++||||++.+|+++||||||++||+.+...+.+.++..+.+++|+|++||+++++..||++++|++|++++.|+.
T Consensus 163 Gq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~ 242 (282)
T cd03291 163 GQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTF 242 (282)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999887876555555568999999999999888999999999999999999
Q ss_pred hhHHh
Q 000475 804 EDLIA 808 (1470)
Q Consensus 804 ~~l~~ 808 (1470)
+++..
T Consensus 243 ~~~~~ 247 (282)
T cd03291 243 SELQS 247 (282)
T ss_pred HHHHh
Confidence 88875
No 300
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-37 Score=368.85 Aligned_cols=214 Identities=24% Similarity=0.381 Sum_probs=186.1
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCC----CHHHHhc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI----GLQDLRS 1295 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~~LR~ 1295 (1470)
|++ |++++|... . .|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... .....|+
T Consensus 2 l~~-~l~k~~~~~---~-~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---C-LTVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---E-EEEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 999999642 2 399999999999999999999999999999999999999999999998753 2455788
Q ss_pred ccEEEccCCCCCcc-cHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHcc
Q 000475 1296 RLSIIPQDPMLFQG-TVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1373 (1470)
Q Consensus 1296 ~isiIpQdp~LF~g-TIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1373 (1470)
+++|+||++.+|.. |+++|+... ....++++.++++.+++.+.....| .+||||||||++|||||++
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRYP-----------GSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCCc-----------ccCCHHHHHHHHHHHHHHc
Confidence 99999999999975 999999742 3344667888999998866554433 4799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChH
Q 000475 1374 KKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSF 1449 (1470)
Q Consensus 1374 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f 1449 (1470)
+|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++...|
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~~~~ 224 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSAMRP 224 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcchhh
Confidence 9999999999999999999999999987653 6899999999998876 99999999999999999999998776433
No 301
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.8e-37 Score=329.37 Aligned_cols=203 Identities=29% Similarity=0.446 Sum_probs=173.0
Q ss_pred CccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC-------
Q 000475 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------- 659 (1470)
Q Consensus 588 ~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------- 659 (1470)
...|+++++++++.+ ...+++ ||+|++||+++|+|++||||||||++|+|+++|++|++ .+.|
T Consensus 6 ~~~I~vr~v~~~fG~--------~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI-~i~G~~i~~ls 76 (263)
T COG1127 6 EPLIEVRGVTKSFGD--------RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEI-LIDGEDIPQLS 76 (263)
T ss_pred cceEEEeeeeeecCC--------EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeE-EEcCcchhccC
Confidence 457999999999964 467888 99999999999999999999999999999999999997 7776
Q ss_pred ---------EeEEEcCCCCCCC-ccHHHHHhcCC----CCCHHHHHH----HHHHhcchHH-HHhccCCCcccccCCCCC
Q 000475 660 ---------KKAYVPQSSWIQT-GTIRENILFGK----DMRQSFYEE----VLEGCALNQD-IEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 ---------~~ayv~Q~~~i~~-~Ti~eNI~~g~----~~~~~~y~~----v~~~~~l~~d-~~~l~~g~~t~ig~~g~~ 720 (1470)
++|+++|+.-+|+ .||+||+.|.. ...++..++ -++.++|..+ .+.+ +.+
T Consensus 77 ~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----------PsE 145 (263)
T COG1127 77 EEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLY-----------PSE 145 (263)
T ss_pred HHHHHHHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----------chh
Confidence 3699999999987 59999999963 234444443 3567777776 4444 468
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcC--CcEEEEEcCCcchhhh-cCEEEEEeCCEE
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLS--QKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~--~~tvilvtH~~~~l~~-~d~i~~l~~G~i 797 (1470)
||||++.|++||||+..||+++++|||||+|||.++. .|+++++.+.+ +-|+|+||||++.+.. ||+|+++.||+|
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~-~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv 224 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAG-VIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKV 224 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHH-HHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEE
Confidence 9999999999999999999999999999999999755 45677766543 7899999999998765 999999999999
Q ss_pred EEecChhhHHhhch
Q 000475 798 EQSGKYEDLIADQN 811 (1470)
Q Consensus 798 ~~~g~~~~l~~~~~ 811 (1470)
...|+++|+.+..+
T Consensus 225 ~~~Gt~~el~~sd~ 238 (263)
T COG1127 225 IAEGTPEELLASDD 238 (263)
T ss_pred EEeCCHHHHHhCCC
Confidence 99999999988333
No 302
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.4e-37 Score=349.27 Aligned_cols=209 Identities=23% Similarity=0.349 Sum_probs=180.4
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|.. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5899999999963 35999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEccCCCCCcccHHHhcCcC----CC-CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHcc
Q 000475 1299 IIPQDPMLFQGTVRTNLDPL----EQ-HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1373 (1470)
Q Consensus 1299 iIpQdp~LF~gTIR~NLdp~----~~-~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1373 (1470)
++||+|.+|+.|+++|+... .. ..++++.++++.+++.+.. ......+||+|||||++|||||++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTI----------LTKNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChHH----------hcCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999631 11 1234566777777774311 123345799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEe-CCEEEEecChh
Q 000475 1374 KKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLD-EGKVLEYDSPR 1439 (1470)
Q Consensus 1374 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~~DrIlvL~-~G~vvE~g~p~ 1439 (1470)
+|++++|||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+..||+|++|+ ++..++.|+|+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999999999864 3789999999999998899999995 56667777764
No 303
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.7e-37 Score=353.29 Aligned_cols=212 Identities=21% Similarity=0.279 Sum_probs=178.0
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCC--CCCCcEEEEcCEeCCCCCHHHH-hcc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV--EPSGGRILIDGVDISMIGLQDL-RSR 1296 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~--~p~~G~I~IDG~dI~~i~l~~L-R~~ 1296 (1470)
|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 578999999963 35999999999999999999999999999999999994 7999999999999998877664 456
Q ss_pred cEEEccCCCCCcc-cHHHhcCcC----CC------CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000475 1297 LSIIPQDPMLFQG-TVRTNLDPL----EQ------HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1361 (1470)
Q Consensus 1297 isiIpQdp~LF~g-TIR~NLdp~----~~------~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQ 1361 (1470)
++++||+|.+|.+ |+++|+... .. .+ ++++.++++..++.+.. ++..+. ..|||||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~---~~LS~G~ 149 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEF------LNRSVN---EGFSGGE 149 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhh------cccccc---cCcCHHH
Confidence 9999999999887 899998421 10 11 23456667777664211 233332 2499999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh--cCEEEEEeCCEEEEecCh
Q 000475 1362 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID--NDLVLVLDEGKVLEYDSP 1438 (1470)
Q Consensus 1362 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~--~DrIlvL~~G~vvE~g~p 1438 (1470)
|||++|||||+++|++|+|||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|++
T Consensus 150 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (243)
T TIGR01978 150 KKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDV 229 (243)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCH
Confidence 999999999999999999999999999999999999999864 47899999999999976 799999999999999998
Q ss_pred hHHh
Q 000475 1439 RQLL 1442 (1470)
Q Consensus 1439 ~~Ll 1442 (1470)
+++-
T Consensus 230 ~~~~ 233 (243)
T TIGR01978 230 ELAK 233 (243)
T ss_pred HHhc
Confidence 7543
No 304
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-37 Score=354.59 Aligned_cols=211 Identities=23% Similarity=0.358 Sum_probs=184.2
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCC--------CcEEEEcCEeCCCCCHH
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS--------GGRILIDGVDISMIGLQ 1291 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~--------~G~I~IDG~dI~~i~l~ 1291 (1470)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRH--RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECC--EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 689999999964 35999999999999999999999999999999999999998 99999999999888888
Q ss_pred HHhcccEEEccCCC-CCcccHHHhcCcCC--------CC---CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCCh
Q 000475 1292 DLRSRLSIIPQDPM-LFQGTVRTNLDPLE--------QH---SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSV 1359 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~-LF~gTIR~NLdp~~--------~~---sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSg 1359 (1470)
.+|+.++++||++. +|..|+++|+.... .. .++.++++++..++.+.. + .....|||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~LSg 148 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALV-------G----RDVTTLSG 148 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhh-------c----CCcccCCH
Confidence 88889999999985 57889999996421 11 123467788888775432 2 23457999
Q ss_pred hHHHHHHHHHHHc---------cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEE
Q 000475 1360 GQRQLVCLARVLL---------KKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVL 1427 (1470)
Q Consensus 1360 GQrQrl~LARALL---------r~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL 1427 (1470)
|||||++|||||+ .+|++|+|||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.+ ||++++|
T Consensus 149 G~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l 228 (272)
T PRK13547 149 GELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAML 228 (272)
T ss_pred HHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEE
Confidence 9999999999999 59999999999999999999999999998643 6899999999999965 9999999
Q ss_pred eCCEEEEecChhHHhh
Q 000475 1428 DEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1428 ~~G~vvE~g~p~~Ll~ 1443 (1470)
++|++++.|+++++++
T Consensus 229 ~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 229 ADGAIVAHGAPADVLT 244 (272)
T ss_pred ECCeEEEecCHHHHcC
Confidence 9999999999999875
No 305
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2e-36 Score=391.48 Aligned_cols=111 Identities=19% Similarity=0.298 Sum_probs=96.8
Q ss_pred ccCc-cccCCCCCCChhHHHHHHHHHHHccCC---CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh
Q 000475 1345 LLDA-PVAEDGENWSVGQRQLVCLARVLLKKK---RILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI 1419 (1470)
Q Consensus 1345 gLdt-~v~e~G~nLSgGQrQrl~LARALLr~~---~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~ 1419 (1470)
||+. ..+.....||||||||+.|||+|+++| +++||||||++||+++.+.+.+.|++.. ++.|||+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 4544 356667889999999999999999999 9999999999999999999999998764 5789999999999998
Q ss_pred hcCEEEEE------eCCEEEEecChhHHhhcCCChHHHHHHH
Q 000475 1420 DNDLVLVL------DEGKVLEYDSPRQLLEDNSSSFSKLVAE 1455 (1470)
Q Consensus 1420 ~~DrIlvL------~~G~vvE~g~p~~Ll~~~~s~f~~lv~~ 1455 (1470)
.||+|++| ++|+|++.|+|+++.+++.|.=.+..+.
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~~~s~t~~~l~~ 939 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKVEASYTGRYLKP 939 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhCcccHHHHHHHH
Confidence 99999999 7999999999999998776654444433
No 306
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-37 Score=355.83 Aligned_cols=204 Identities=30% Similarity=0.428 Sum_probs=173.6
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE--------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------- 660 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------- 660 (1470)
.|+++|++.+|.+. . .+++ |+++++||+++++|||||||||||++|+|+.+|++|++ .++|+
T Consensus 3 ~i~l~~v~K~yg~~-------~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I-~i~g~~vt~l~P~ 73 (338)
T COG3839 3 ELELKNVRKSFGSF-------E-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEI-LIDGRDVTDLPPE 73 (338)
T ss_pred EEEEeeeEEEcCCc-------e-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEECCCCChh
Confidence 58999999999743 2 7889 99999999999999999999999999999999999997 78774
Q ss_pred ---eEEEcCCCCC-CCccHHHHHhcCCCCC-------HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHH
Q 000475 661 ---KAYVPQSSWI-QTGTIRENILFGKDMR-------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1470)
Q Consensus 661 ---~ayv~Q~~~i-~~~Ti~eNI~~g~~~~-------~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 729 (1470)
+|+|+|+.-+ ++.||+|||.||.... +++.+++.+..++++.++ .++.+|||||||||
T Consensus 74 ~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~-----------r~P~~LSGGQrQRV 142 (338)
T COG3839 74 KRGIAMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLN-----------RKPLQLSGGQRQRV 142 (338)
T ss_pred HCCEEEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHh-----------cCcccCChhhHHHH
Confidence 6999999877 4579999999997653 455666677777766655 45678999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhhH
Q 000475 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYEDL 806 (1470)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 806 (1470)
|||||+.++|+++|||||+|+||++....+-.++. .+. -+.|+|+||||..+.. -+|+|++|++|+|.+.|++.|+
T Consensus 143 AlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~-~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~el 221 (338)
T COG3839 143 ALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIK-KLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLEL 221 (338)
T ss_pred HHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHH-HHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHH
Confidence 99999999999999999999999999877755543 332 2689999999998765 5999999999999999999999
Q ss_pred HhhchhHH
Q 000475 807 IADQNSEL 814 (1470)
Q Consensus 807 ~~~~~~~~ 814 (1470)
..++...|
T Consensus 222 y~~P~n~f 229 (338)
T COG3839 222 YERPANLF 229 (338)
T ss_pred hhCccchh
Confidence 87554443
No 307
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-37 Score=329.00 Aligned_cols=215 Identities=26% Similarity=0.438 Sum_probs=184.4
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH-Hhccc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i 1297 (1470)
-++++|++..|.+ -.+|+||||++++||.++++||||+|||||+++|+|+.+|.+|+|.++|.||+..+.|+ .|..|
T Consensus 3 mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 3689999999976 35999999999999999999999999999999999999999999999999999999988 68899
Q ss_pred EEEccCCCCCcc-cHHHhcCcCCC------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPLEQ------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~~~------~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
+||||...+|.. ||.|||..... ..+..+.++.+. .| -|...-...+.+|||||+|.++||||
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~~~e~v~~l---------FP-~Lker~~~~aG~LSGGEQQMLAiaRA 150 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQERDLEEVYEL---------FP-RLKERRNQRAGTLSGGEQQMLAIARA 150 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccccccccccHHHHHHH---------Ch-hHHHHhcCcccCCChHHHHHHHHHHH
Confidence 999999999977 99999974311 111112222222 12 12333344567899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1445 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~ 1445 (1470)
|+.+||+|+|||||.+|-|.--+.|.++|++..+ +-||+.|-++.....+ +||.+||++|+|+..|++++|.+++
T Consensus 151 Lm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 151 LMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred HhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 9999999999999999999999999999998764 5699999999998765 9999999999999999999999875
No 308
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=6.4e-37 Score=352.11 Aligned_cols=210 Identities=23% Similarity=0.369 Sum_probs=181.0
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEEcCEeCCCCC-----H
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS---GGRILIDGVDISMIG-----L 1290 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~---~G~I~IDG~dI~~i~-----l 1290 (1470)
-|+++||+++|+. ..+|+|+||++++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+ .
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 4899999999963 35999999999999999999999999999999999999986 499999999987542 3
Q ss_pred HHHhcccEEEccCCCCCcc-cHHHhcCcCC---------------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCC
Q 000475 1291 QDLRSRLSIIPQDPMLFQG-TVRTNLDPLE---------------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDG 1354 (1470)
Q Consensus 1291 ~~LR~~isiIpQdp~LF~g-TIR~NLdp~~---------------~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G 1354 (1470)
..+|++++|+||++.+|.+ |+++|+.... ...++++.++++..++.+.... ..
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~ 150 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQ-----------RV 150 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhC-----------Cc
Confidence 5678899999999998875 9999996311 1123456778888887654432 23
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCE
Q 000475 1355 ENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGK 1431 (1470)
Q Consensus 1355 ~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~ 1431 (1470)
..||+|||||++|||||+.+|++|+|||||++||.++.+.+.+.|++.. .++|||+++|+++.+.. ||+|++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~ 230 (262)
T PRK09984 151 STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGH 230 (262)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 4699999999999999999999999999999999999999999999864 37899999999998755 99999999999
Q ss_pred EEEecChhHH
Q 000475 1432 VLEYDSPRQL 1441 (1470)
Q Consensus 1432 vvE~g~p~~L 1441 (1470)
+++.|+++++
T Consensus 231 i~~~g~~~~~ 240 (262)
T PRK09984 231 VFYDGSSQQF 240 (262)
T ss_pred EEEeCCHHHh
Confidence 9999999996
No 309
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-37 Score=325.00 Aligned_cols=205 Identities=24% Similarity=0.367 Sum_probs=171.6
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCC-----CcEEEECC---
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRIS-----GAAIKVHG--- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~-----G~~i~~~g--- 659 (1470)
..++++|.++.|.. ...|++ |++|++++++|++||+||||||||+++.+..+..+ |++ .++|
T Consensus 6 ~~~~~~~l~~yYg~--------~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v-~~~g~ni 76 (253)
T COG1117 6 PAIEVRDLNLYYGD--------KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEV-LLDGKNI 76 (253)
T ss_pred ceeEecceeEEECc--------hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEE-EECCeec
Confidence 46899999999974 357889 99999999999999999999999999999877665 554 4544
Q ss_pred ------------EeEEEcCCCCCCCccHHHHHhcCCCCC---H----HHHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 660 ------------KKAYVPQSSWIQTGTIRENILFGKDMR---Q----SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~~---~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
++|+|+|.|.-|..||+|||.+|.... . +..++.++..+|-+..+. .+.+.+..
T Consensus 77 ~~~~~d~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~ 149 (253)
T COG1117 77 YDPKVDVVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALG 149 (253)
T ss_pred cCCCCCHHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccC
Confidence 359999999999999999999995432 1 234444555555444332 24467788
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEE
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~ 799 (1470)
|||||+||++||||+.-+|+|+|||||||||||.+..+| ++++..+.++-|||+|||+++.... +|+...+.+|++++
T Consensus 150 LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kI-EeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE 228 (253)
T COG1117 150 LSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKI-EELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVE 228 (253)
T ss_pred CChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHH-HHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEE
Confidence 999999999999999999999999999999999988887 6678888788899999999998765 89999999999999
Q ss_pred ecChhhHHhhc
Q 000475 800 SGKYEDLIADQ 810 (1470)
Q Consensus 800 ~g~~~~l~~~~ 810 (1470)
.|+.++++.++
T Consensus 229 ~g~T~~iF~~P 239 (253)
T COG1117 229 FGPTDKIFTNP 239 (253)
T ss_pred EcCHHhhhcCc
Confidence 99999988743
No 310
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-37 Score=351.31 Aligned_cols=201 Identities=23% Similarity=0.287 Sum_probs=173.6
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +.+++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 689999999964 3599999999999999999999999999999999999999999999999998642 346899
Q ss_pred EccCCCCCc-ccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQ-GTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
+||+|.+|. .|+++|+... .... ++++.++++..++.+.... ...+||||||||++|||||
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qrl~laral 143 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKR-----------YIWQLSGGQRQRVGIARAL 143 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhC-----------ChhhCCHHHHHHHHHHHHH
Confidence 999999887 5999999632 1122 2356778888887654432 2357999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEe--CCEEEEecCh
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLD--EGKVLEYDSP 1438 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~--~G~vvE~g~p 1438 (1470)
+++|++|+|||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|+ +|++++.+++
T Consensus 144 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 144 AANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999999999998863 47999999999999866 99999998 5999998764
No 311
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.1e-36 Score=341.95 Aligned_cols=204 Identities=26% Similarity=0.414 Sum_probs=178.5
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
++++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++... . ++++++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~---~-~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRK---D-LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccc---c-cccEEE
Confidence 478999999964 3599999999999999999999999999999999999999999999999987642 2 358999
Q ss_pred EccCCCCCc-ccHHHhcCcC---CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCC
Q 000475 1300 IPQDPMLFQ-GTVRTNLDPL---EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1375 (1470)
Q Consensus 1300 IpQdp~LF~-gTIR~NLdp~---~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1375 (1470)
+||++.+|. .|+++|+... ...+++++.++++..++.+..... ..+||+|||||++||||++++|
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~~rv~laral~~~p 143 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGKKK-----------AKQFSLGMKQRLGIAIALLNHP 143 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHhhh-----------HhhCCHHHHHHHHHHHHHhcCC
Confidence 999998886 5999998631 234567888999999887654332 2469999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000475 1376 RILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1440 (1470)
Q Consensus 1376 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~ 1440 (1470)
++|+|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|++.+
T Consensus 144 ~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 144 KLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999999998764 47899999999999865 99999999999999999865
No 312
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.6e-37 Score=337.94 Aligned_cols=200 Identities=54% Similarity=0.981 Sum_probs=180.3
Q ss_pred EEEeeeEEEeCCCccccCCC--cccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCEeEEEcCC
Q 000475 591 IDIEAGEYAWDAREENFKKP--TIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGKKAYVPQS 667 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~--~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~~ayv~Q~ 667 (1470)
++++|++++|+.. .. .+.+++ ||++++|++++|+||||||||||+++|+|+.+|++|++ .++|.++|++|+
T Consensus 1 l~~~~l~~~~~~~-----~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i-~~~g~i~~~~q~ 74 (204)
T cd03250 1 ISVEDASFTWDSG-----EQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSV-SVPGSIAYVSQE 74 (204)
T ss_pred CEEeEEEEecCCC-----CccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeE-EEcCEEEEEecC
Confidence 4689999999643 10 357889 99999999999999999999999999999999999997 899999999999
Q ss_pred CCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCc
Q 000475 668 SWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDP 747 (1470)
Q Consensus 668 ~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep 747 (1470)
|.+++.|++||+.++.+.+.++..++.+.+++.+.+..+|.|.++.+++++.+||||||||++||||++.+|+++|||||
T Consensus 75 ~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP 154 (204)
T cd03250 75 PWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDP 154 (204)
T ss_pred chhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 99999999999999877766677778888899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCE
Q 000475 748 FSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDAADLVLVMKDGK 796 (1470)
Q Consensus 748 ~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~ 796 (1470)
|++||++..+.+++.++.... +++|+|++||+++.+..||++++|++|+
T Consensus 155 ~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 155 LSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred cccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999998888876665443 4789999999999988899999999984
No 313
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-37 Score=329.50 Aligned_cols=171 Identities=44% Similarity=0.745 Sum_probs=161.9
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+...+.+++|+||++++||.+||+|++|||||||+++|.|+++|++|+|.++|.++...+...+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 47899999997543469999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000475 1300 IPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILV 1379 (1470)
Q Consensus 1300 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILl 1379 (1470)
+||+|.+|+.|+++|+ ||+|||||++||||++++|++|+
T Consensus 81 ~~~~~~~~~~t~~e~l-----------------------------------------LS~G~~~rl~la~al~~~p~lll 119 (171)
T cd03228 81 VPQDPFLFSGTIRENI-----------------------------------------LSGGQRQRIAIARALLRDPPILI 119 (171)
T ss_pred EcCCchhccchHHHHh-----------------------------------------hCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999997 99999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCE
Q 000475 1380 LDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGK 1431 (1470)
Q Consensus 1380 LDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~ 1431 (1470)
|||||++||+++...+.+.|++..+++|+|+++|+++.+..||++++|++|+
T Consensus 120 lDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 120 LDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 9999999999999999999998777899999999999998899999999985
No 314
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=4.2e-37 Score=344.43 Aligned_cols=202 Identities=23% Similarity=0.325 Sum_probs=175.7
Q ss_pred EEEEeEEEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHH---HHh
Q 000475 1220 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ---DLR 1294 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~--~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR 1294 (1470)
++++|++++|+++. ..+|+|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++..++.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996532 4699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cccEEEccCCCCCc-ccHHHhcCcCC----CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000475 1295 SRLSIIPQDPMLFQ-GTVRTNLDPLE----QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1365 (1470)
Q Consensus 1295 ~~isiIpQdp~LF~-gTIR~NLdp~~----~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl 1365 (1470)
+.++++||+|.+|. .|+.+|+.... ..+ ++++.++++++++.+.....| .+||+|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP-----------HNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHH
Confidence 89999999999987 69999997421 222 234677788888866655443 46999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeCCEE
Q 000475 1366 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDEGKV 1432 (1470)
Q Consensus 1366 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~~DrIlvL~~G~v 1432 (1470)
+|||||+++|++|+|||||++||+++.+.+.+.|++.. .++|||+|+|+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 99999999999999999999999999999999998865 37999999999997666999999999986
No 315
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-37 Score=339.77 Aligned_cols=205 Identities=33% Similarity=0.450 Sum_probs=169.5
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE--------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------- 660 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------- 660 (1470)
.|.+++.+..|+. ...++| +++|+.||.+|+.|||||||||||++|+|+..|++|.+ .++|+
T Consensus 2 ~i~i~~~~~~~~~--------~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I-~~~~~~l~D~~~~ 72 (345)
T COG1118 2 SIRINNVKKRFGA--------FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRI-RLNGRVLFDVSNL 72 (345)
T ss_pred ceeehhhhhhccc--------ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceE-EECCEeccchhcc
Confidence 3667777777764 356668 99999999999999999999999999999999999986 77775
Q ss_pred ------eEEEcCCCCCC-CccHHHHHhcCCCCC---------HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchH
Q 000475 661 ------KAYVPQSSWIQ-TGTIRENILFGKDMR---------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1470)
Q Consensus 661 ------~ayv~Q~~~i~-~~Ti~eNI~~g~~~~---------~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 724 (1470)
||||+|+.-+| ..||.|||.||.+.. +.+.++.++.|.|+.--+ ..+..||||
T Consensus 73 ~~~~R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~-----------ryP~QLSGG 141 (345)
T COG1118 73 AVRDRKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLAD-----------RYPAQLSGG 141 (345)
T ss_pred chhhcceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhh-----------cCchhcChH
Confidence 69999997765 579999999997432 344556677777654333 346799999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhh-hcCEEEEEeCCEEEEec
Q 000475 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g 801 (1470)
|||||||||||..+|+++||||||+|||++..+.+-. .+.... + +.|+|+||||.++.- .||+|++|++|+|.+.|
T Consensus 142 QrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~-wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg 220 (345)
T COG1118 142 QRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRR-WLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVG 220 (345)
T ss_pred HHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHH-HHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeC
Confidence 9999999999999999999999999999999877644 444333 3 789999999999864 59999999999999999
Q ss_pred ChhhHHhhchhHHH
Q 000475 802 KYEDLIADQNSELV 815 (1470)
Q Consensus 802 ~~~~l~~~~~~~~~ 815 (1470)
+++|+...++..|.
T Consensus 221 ~p~ev~~~P~s~fV 234 (345)
T COG1118 221 PPDEVYDHPASRFV 234 (345)
T ss_pred CHHHHhcCCCccce
Confidence 99999876655443
No 316
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.2e-36 Score=342.65 Aligned_cols=210 Identities=30% Similarity=0.454 Sum_probs=182.4
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+.. ..+.+++ ||++++||+++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 1 i~~~~l~~~~~~~------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 73 (237)
T cd03252 1 ITFEHVRFRYKPD------GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRV-LVDGHDLALADPAW 73 (237)
T ss_pred CEEEEEEEecCCC------CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEE-EECCeehHhcCHHH
Confidence 4688999999642 2457889 99999999999999999999999999999999999986 6766
Q ss_pred ---EeEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHH
Q 000475 660 ---KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAV 735 (1470)
Q Consensus 660 ---~~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 735 (1470)
.++|++|++++++.|++||+.++.. .......+.++..++.+.++.+|.|..+..+.++.+|||||||||+||||+
T Consensus 74 ~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral 153 (237)
T cd03252 74 LRRQVGVVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARAL 153 (237)
T ss_pred HhhcEEEEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHH
Confidence 3799999999998999999998653 333444455566677777888888888888889999999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHHh
Q 000475 736 YSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIA 808 (1470)
Q Consensus 736 ~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 808 (1470)
+.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++++..||+|++|++|++++.|+++++..
T Consensus 154 ~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 225 (237)
T cd03252 154 IHNPRILIFDEATSALDYESEHAIMR-NMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLA 225 (237)
T ss_pred hhCCCEEEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999887765 4555556899999999999997899999999999999999988876
No 317
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=7.7e-37 Score=364.74 Aligned_cols=212 Identities=24% Similarity=0.373 Sum_probs=181.6
Q ss_pred eEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCC----HHHHhcccEE
Q 000475 1224 NLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG----LQDLRSRLSI 1299 (1470)
Q Consensus 1224 nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~----l~~LR~~isi 1299 (1470)
|++++|+.. .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ....|+++++
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 889999642 24 999999999999999999999999999999999999999999999987542 3456889999
Q ss_pred EccCCCCCcc-cHHHhcCcC-CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHcc
Q 000475 1300 IPQDPMLFQG-TVRTNLDPL-EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1373 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp~-~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1373 (1470)
+||+|.+|.+ |+++|+... .... ++++.+.++..++.+..... ..+||||||||++|||||++
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGqkqRvalAraL~~ 148 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLLGRL-----------PGRLSGGEKQRVAIGRALLS 148 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHhcCC-----------hhhCCHHHHHHHHHHHHHHc
Confidence 9999999976 999999742 1111 23467778888776544332 35699999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHH
Q 000475 1374 KKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFS 1450 (1470)
Q Consensus 1374 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~ 1450 (1470)
+|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++...|.
T Consensus 149 ~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~ 228 (354)
T TIGR02142 149 SPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPWL 228 (354)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCcccc
Confidence 9999999999999999999999999988643 7899999999999876 999999999999999999999987765553
No 318
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-37 Score=338.17 Aligned_cols=216 Identities=25% Similarity=0.394 Sum_probs=190.1
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCE---eCCCCCHHHHhc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGV---DISMIGLQDLRS 1295 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~---dI~~i~l~~LR~ 1295 (1470)
.|+++|++..|+. -.+++|||++|+.||.+|+.||||||||||+++|.|+..|++|+|.+||. |.+++ +.-.+
T Consensus 2 ~i~i~~~~~~~~~--~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~--~~~~R 77 (345)
T COG1118 2 SIRINNVKKRFGA--FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNL--AVRDR 77 (345)
T ss_pred ceeehhhhhhccc--ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhcc--chhhc
Confidence 3778888888864 35899999999999999999999999999999999999999999999999 77763 44457
Q ss_pred ccEEEccCCCCCcc-cHHHhcCcCC---------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000475 1296 RLSIIPQDPMLFQG-TVRTNLDPLE---------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1365 (1470)
Q Consensus 1296 ~isiIpQdp~LF~g-TIR~NLdp~~---------~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl 1365 (1470)
+||++.||.-||.. ||++|+...- ...+..+.+.|+.|+|...-...| ..||||||||+
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQRV 146 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQRV 146 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHHH
Confidence 89999999999976 9999997532 123456777899999887766655 36899999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1366 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1366 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
+|||||...|++|+||||.++||..-...+++-|++.. -++|++.|||+.+.+.. ||||+||++|+|...|+|+|..
T Consensus 147 ALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 147 ALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 99999999999999999999999999999999998754 37999999999998866 9999999999999999999999
Q ss_pred hcCCChH
Q 000475 1443 EDNSSSF 1449 (1470)
Q Consensus 1443 ~~~~s~f 1449 (1470)
..+++.|
T Consensus 227 ~~P~s~f 233 (345)
T COG1118 227 DHPASRF 233 (345)
T ss_pred cCCCccc
Confidence 9999887
No 319
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.3e-37 Score=344.38 Aligned_cols=192 Identities=24% Similarity=0.314 Sum_probs=148.6
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.+-+.||+|.|+... +.+++++|-|.--.+|+||||+|.|||||+++|.|-++|+.|+..=+ -|-+||
T Consensus 586 vLGlH~VtFgy~gqk-pLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn-----------hrL~iG 653 (807)
T KOG0066|consen 586 VLGLHDVTFGYPGQK-PLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN-----------HRLRIG 653 (807)
T ss_pred eeecccccccCCCCC-chhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc-----------ceeeee
Confidence 356899999997654 58999999999999999999999999999999999999999986433 356789
Q ss_pred EEccCCC--C-CcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCC
Q 000475 1299 IIPQDPM--L-FQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1375 (1470)
Q Consensus 1299 iIpQdp~--L-F~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1375 (1470)
...|..- | -..|--+.|.-.-...-++-..+|...||....... ....|||||+-|++||-.-|+.|
T Consensus 654 ~FdQh~~E~L~~Eetp~EyLqr~FNlpyq~ARK~LG~fGL~sHAHTi----------kikdLSGGQKaRValaeLal~~P 723 (807)
T KOG0066|consen 654 WFDQHANEALNGEETPVEYLQRKFNLPYQEARKQLGTFGLASHAHTI----------KIKDLSGGQKARVALAELALGGP 723 (807)
T ss_pred chhhhhHHhhccccCHHHHHHHhcCCChHHHHHHhhhhhhhhccceE----------eeeecCCcchHHHHHHHHhcCCC
Confidence 8888652 1 122444444332233445666777777765432211 12469999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh--cCEEEEEeCCEEEEe
Q 000475 1376 RILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID--NDLVLVLDEGKVLEY 1435 (1470)
Q Consensus 1376 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~--~DrIlvL~~G~vvE~ 1435 (1470)
+||||||||++||.++-..+-++|+++ +..||+|+|+-..|.. |. .+|+++-.|-|.
T Consensus 724 DvlILDEPTNNLDIESIDALaEAIney--~GgVi~VsHDeRLi~eT~C~-LwVvE~Q~i~eI 782 (807)
T KOG0066|consen 724 DVLILDEPTNNLDIESIDALAEAINEY--NGGVIMVSHDERLIVETDCN-LWVVENQGIDEI 782 (807)
T ss_pred CEEEecCCCCCcchhhHHHHHHHHHhc--cCcEEEEecccceeeecCce-EEEEccCChhhc
Confidence 999999999999999999999999986 4589999999888854 44 556665555443
No 320
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.6e-36 Score=349.33 Aligned_cols=223 Identities=23% Similarity=0.369 Sum_probs=183.9
Q ss_pred cEEEEeEEEEeCCC-------CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHH
Q 000475 1219 KIELENLLVQYNPT-------LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~-------~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~ 1291 (1470)
.|+++||+++|+.+ ..++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38899999999741 24699999999999999999999999999999999999999999999999999887653
Q ss_pred ---HHhcccEEEccCCC--CC-cccHHHhcCc-C---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCC
Q 000475 1292 ---DLRSRLSIIPQDPM--LF-QGTVRTNLDP-L---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENW 1357 (1470)
Q Consensus 1292 ---~LR~~isiIpQdp~--LF-~gTIR~NLdp-~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nL 1357 (1470)
.+|++++|+||+|. ++ ..|+++|+.. . ...+ ++.+.++++..++.. .........|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~L 152 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDD----------SVLDKRPPQL 152 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCCh----------hHhhCCCccC
Confidence 47889999999983 44 4699999742 1 1111 123455555554421 1223345679
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000475 1358 SVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLE 1434 (1470)
Q Consensus 1358 SgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE 1434 (1470)
|+|||||++|||||+++|+||+|||||++||.++...+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++
T Consensus 153 S~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~ 232 (268)
T PRK10419 153 SGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVE 232 (268)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEee
Confidence 99999999999999999999999999999999999999999987643 7899999999999976 99999999999999
Q ss_pred ecChhHHhhcCCChHHHH
Q 000475 1435 YDSPRQLLEDNSSSFSKL 1452 (1470)
Q Consensus 1435 ~g~p~~Ll~~~~s~f~~l 1452 (1470)
.|+++++.+ .++.|..-
T Consensus 233 ~g~~~~~~~-~~~~~~~~ 249 (268)
T PRK10419 233 TQPVGDKLT-FSSPAGRV 249 (268)
T ss_pred eCChhhccC-CCCHHHHH
Confidence 999999885 45555433
No 321
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-37 Score=354.46 Aligned_cols=208 Identities=32% Similarity=0.419 Sum_probs=176.4
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE-------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK------- 660 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~------- 660 (1470)
..++++|++.+|.+ ...++| ||+|++||+++++|||||||||||++|+|..+|++|++ .++|+
T Consensus 4 ~~l~i~~v~k~yg~--------~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I-~l~G~~i~~lpp 74 (352)
T COG3842 4 PALEIRNVSKSFGD--------FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEI-LLDGEDITDVPP 74 (352)
T ss_pred ceEEEEeeeeecCC--------eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEECCCCCh
Confidence 46899999999973 467888 99999999999999999999999999999999999986 88875
Q ss_pred ----eEEEcCCCCCC-CccHHHHHhcCCCC----C-H---HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHH
Q 000475 661 ----KAYVPQSSWIQ-TGTIRENILFGKDM----R-Q---SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQ 727 (1470)
Q Consensus 661 ----~ayv~Q~~~i~-~~Ti~eNI~~g~~~----~-~---~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 727 (1470)
+++|+|+--|| +.||+|||.||... . + ++.+++++..+|.+-. ..++..|||||||
T Consensus 75 ~kR~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~-----------~R~p~qLSGGQqQ 143 (352)
T COG3842 75 EKRPIGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFA-----------DRKPHQLSGGQQQ 143 (352)
T ss_pred hhcccceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhh-----------hhChhhhChHHHH
Confidence 59999997775 57999999999762 1 2 3556666666655422 3567899999999
Q ss_pred HHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcch-hhhcCEEEEEeCCEEEEecChhh
Q 000475 728 RIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEF-LDAADLVLVMKDGKIEQSGKYED 805 (1470)
Q Consensus 728 Rv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~-l~~~d~i~~l~~G~i~~~g~~~~ 805 (1470)
||||||||..+|+++|||||+||||.+.+.++-.++..... .|.|.|+||||.++ +..+|+|.+|++|+|.+.|+++|
T Consensus 144 RVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~e 223 (352)
T COG3842 144 RVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEE 223 (352)
T ss_pred HHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHH
Confidence 99999999999999999999999999998888766554332 38999999999987 56699999999999999999999
Q ss_pred HHhhchhHHHH
Q 000475 806 LIADQNSELVR 816 (1470)
Q Consensus 806 l~~~~~~~~~~ 816 (1470)
+...+...|..
T Consensus 224 iY~~P~~~fVA 234 (352)
T COG3842 224 IYERPATRFVA 234 (352)
T ss_pred HhhCcchHHHH
Confidence 98866665544
No 322
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=6.3e-38 Score=323.51 Aligned_cols=215 Identities=24% Similarity=0.426 Sum_probs=184.9
Q ss_pred CcEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH-Hhcc
Q 000475 1218 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSR 1296 (1470)
Q Consensus 1218 g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~ 1296 (1470)
+.+..+|+..+|.. ..|++|+||++++||.||+.||||+||||.+..+.|++.|++|+|.+||.||+.++++. -|-.
T Consensus 3 ~~L~a~~l~K~y~k--r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKK--RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCC--eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 45788999999975 36999999999999999999999999999999999999999999999999999999987 6788
Q ss_pred cEEEccCCCCCcc-cHHHhcCcCCCCC---------HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000475 1297 LSIIPQDPMLFQG-TVRTNLDPLEQHS---------DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1297 isiIpQdp~LF~g-TIR~NLdp~~~~s---------d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
|||+||||.+|.+ ||++||...-+.. .+++.+.|+..++... -...|..||||||+|+-
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hl-----------r~~~a~sLSGGERRR~E 149 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHL-----------RDSKAYSLSGGERRRVE 149 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHH-----------hcCcccccccchHHHHH
Confidence 9999999999988 9999996432221 1223344454444322 22346789999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhh-hhhcCEEEEEeCCEEEEecChhHHhhc
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPT-VIDNDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~t-i~~~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
|||||..+|+.++||||.|++||-+-..||+.|+... +|--|++.-|.... +.-|||.+++.+|+|...|+|+++.+|
T Consensus 150 IARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 150 IARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred HHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 9999999999999999999999999999999998764 56789999999875 555999999999999999999999987
Q ss_pred C
Q 000475 1445 N 1445 (1470)
Q Consensus 1445 ~ 1445 (1470)
+
T Consensus 230 ~ 230 (243)
T COG1137 230 E 230 (243)
T ss_pred h
Confidence 5
No 323
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.6e-36 Score=345.38 Aligned_cols=222 Identities=20% Similarity=0.346 Sum_probs=182.5
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEe-----CCCCCHHH-
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVD-----ISMIGLQD- 1292 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~d-----I~~i~l~~- 1292 (1470)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +...+..+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGG--GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCC--ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 4899999999964 358999999999999999999999999999999999999999999999988 77766553
Q ss_pred ---HhcccEEEccCCC--C-CcccHHHhcC----cCCC----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCC
Q 000475 1293 ---LRSRLSIIPQDPM--L-FQGTVRTNLD----PLEQ----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWS 1358 (1470)
Q Consensus 1293 ---LR~~isiIpQdp~--L-F~gTIR~NLd----p~~~----~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS 1358 (1470)
+++.++++||+|. + +..|+.+|+. .... ..++++.+.++..++.+ +.......+||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----------~~~~~~~~~LS 150 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDP----------TRIDDLPRAFS 150 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCCh----------hhhhcCchhcC
Confidence 3467999999984 2 3457888863 1111 12344555566555531 12233456799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000475 1359 VGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEY 1435 (1470)
Q Consensus 1359 gGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~ 1435 (1470)
||||||++|||||+++|++|+|||||++||+.+...+.+.|++.. .+.|||+|+|+++.+.. ||++++|++|++++.
T Consensus 151 gG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~ 230 (253)
T TIGR02323 151 GGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVES 230 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEE
Confidence 999999999999999999999999999999999999999998754 37899999999999986 999999999999999
Q ss_pred cChhHHhhcCCChHHHH
Q 000475 1436 DSPRQLLEDNSSSFSKL 1452 (1470)
Q Consensus 1436 g~p~~Ll~~~~s~f~~l 1452 (1470)
|+++++..++...|.++
T Consensus 231 ~~~~~~~~~~~~~~~~~ 247 (253)
T TIGR02323 231 GLTDQVLDDPQHPYTQL 247 (253)
T ss_pred CCHHHHhcCCCCHHHHH
Confidence 99999987665555443
No 324
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-36 Score=327.97 Aligned_cols=170 Identities=31% Similarity=0.539 Sum_probs=157.6
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
++++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+ .++|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGK--KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 478999999964 25999999999999999999999999999999999999999999999999998765 678899999
Q ss_pred EccCCCCCcc-cHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 000475 1300 IPQDPMLFQG-TVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRIL 1378 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1378 (1470)
+||+|.+|.+ |+++|+. ||+|||||++|||||+++|+|+
T Consensus 78 ~~q~~~~~~~~tv~~~~~----------------------------------------LS~G~~qrv~laral~~~p~il 117 (173)
T cd03230 78 LPEEPSLYENLTVRENLK----------------------------------------LSGGMKQRLALAQALLHDPELL 117 (173)
T ss_pred EecCCccccCCcHHHHhh----------------------------------------cCHHHHHHHHHHHHHHcCCCEE
Confidence 9999999887 9999973 9999999999999999999999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEE
Q 000475 1379 VLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKV 1432 (1470)
Q Consensus 1379 lLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~v 1432 (1470)
+|||||++||+.+.+.+.+.|++.. ++.|+|+++|+.+.+.. ||++++|++|++
T Consensus 118 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 118 ILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 9999999999999999999999864 46899999999999875 999999999974
No 325
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-36 Score=328.60 Aligned_cols=172 Identities=35% Similarity=0.530 Sum_probs=159.2
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCC--HHHHhccc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG--LQDLRSRL 1297 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~--l~~LR~~i 1297 (1470)
|+++|++++|+. .++++|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ....|+.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 35999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred EEEccCCCCCcc-cHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1376 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1376 (1470)
+|+||+|.+|.+ |+++|+... ||+|||||++|||||+++|+
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~--------------------------------------lS~G~~qr~~la~al~~~p~ 120 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG--------------------------------------LSGGQQQRVALARALAMDPD 120 (178)
T ss_pred EEEecCCccCCCCCHHHheeec--------------------------------------CCHHHHHHHHHHHHHHCCCC
Confidence 999999998865 999998653 99999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCE
Q 000475 1377 ILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGK 1431 (1470)
Q Consensus 1377 ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~ 1431 (1470)
+++|||||++||+.+...+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 121 llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 121 VLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999999999999999988654 5899999999999985 99999999985
No 326
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-37 Score=342.23 Aligned_cols=229 Identities=24% Similarity=0.431 Sum_probs=186.8
Q ss_pred EEEEeEEEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC-C----CCcEEEEcCEeCCCCCHHH
Q 000475 1220 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-P----SGGRILIDGVDISMIGLQD 1292 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~--~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~-p----~~G~I~IDG~dI~~i~l~~ 1292 (1470)
++++|+++.|..+. -.+++||||++++||.+||||.|||||||+.++++|+++ | .+|+|.+||.|+.+++.++
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 57899999996532 369999999999999999999999999999999999997 3 5799999999999999876
Q ss_pred Hh----cccEEEccCCCC-Ccc--cHHHhcC----cCCCC-C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCC
Q 000475 1293 LR----SRLSIIPQDPML-FQG--TVRTNLD----PLEQH-S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGEN 1356 (1470)
Q Consensus 1293 LR----~~isiIpQdp~L-F~g--TIR~NLd----p~~~~-s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~n 1356 (1470)
+| ++|++|||||.- |+- ||.+-+. ..... + .++..+.|+.+++.+--+ .+..-...
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~--------~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPER--------RLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHH--------HHhhCCcc
Confidence 43 489999999851 211 3333321 11111 1 335777888888764311 11222356
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000475 1357 WSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVL 1433 (1470)
Q Consensus 1357 LSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vv 1433 (1470)
||||||||+.||-||+.+|++||-||||++||..+.++|.+.|++.. .+.|+|+|||++..+.. ||||+||.+|+||
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 99999999999999999999999999999999999999999998765 48999999999999976 9999999999999
Q ss_pred EecChhHHhhcCCChHHHHHHHH
Q 000475 1434 EYDSPRQLLEDNSSSFSKLVAEF 1456 (1470)
Q Consensus 1434 E~g~p~~Ll~~~~s~f~~lv~~~ 1456 (1470)
|.|+.+++++++...|.+..-..
T Consensus 234 E~g~~~~i~~~P~HPYT~~Ll~s 256 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGLLNS 256 (316)
T ss_pred EeCCHHHHhcCCCChHHHHHHHh
Confidence 99999999999988887654433
No 327
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2.3e-36 Score=344.22 Aligned_cols=208 Identities=27% Similarity=0.432 Sum_probs=179.9
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +.+++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 4899999999964 3599999999999999999999999999999999999999999999987 35799
Q ss_pred EEccCCCCCc---ccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCC
Q 000475 1299 IIPQDPMLFQ---GTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1375 (1470)
Q Consensus 1299 iIpQdp~LF~---gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1375 (1470)
|+||+|.++. .|+++|+......+++++.++++.+++.+.... + ...||+|||||++||||++++|
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-------~----~~~LSgGq~qrv~laral~~~p 139 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHLIDA-------P----MQKLSGGETQRVLLARALLNRP 139 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHHHhC-------C----hhhCCHHHHHHHHHHHHHhcCC
Confidence 9999998765 388998754334567789999999998776533 2 3469999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHHHH
Q 000475 1376 RILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKL 1452 (1470)
Q Consensus 1376 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~l 1452 (1470)
++|+|||||++||+.+...+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++ ++++.|+++++.++ ..|.++
T Consensus 140 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~~--~~~~~~ 216 (251)
T PRK09544 140 QLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSLH--PEFISM 216 (251)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhCC--HHHHHH
Confidence 99999999999999999999999987643 7899999999999865 999999965 79999999998753 345544
Q ss_pred H
Q 000475 1453 V 1453 (1470)
Q Consensus 1453 v 1453 (1470)
+
T Consensus 217 ~ 217 (251)
T PRK09544 217 F 217 (251)
T ss_pred h
Confidence 3
No 328
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-37 Score=316.57 Aligned_cols=213 Identities=28% Similarity=0.410 Sum_probs=185.6
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
+++.+++.+|.+ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|+|+|||+|+.+- +...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcce
Confidence 678999999976 23489999999999999999999999999999999999999999999999999884 5678999999
Q ss_pred EccCCCCCcc-cHHHhcCcCC---CCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1300 IPQDPMLFQG-TVRTNLDPLE---QHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1300 IpQdp~LF~g-TIR~NLdp~~---~~sd~----eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
++-+.-++.- |.||||..|+ +.++. ++.+.-+..++.++. |..++ +||-|+|||++|||||
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~-------~rRv~----~~S~G~kqkV~iARAl 148 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYL-------DRRVG----EFSTGMKQKVAIARAL 148 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHH-------HHHHh----hhchhhHHHHHHHHHH
Confidence 9966666654 9999998764 23333 455556666776664 44554 5999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1445 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~ 1445 (1470)
.++|+|++||||||+||.-|.+.+++.|++.. .+++||.-+|-++.+.. ||||+++.+|+++..|+++++.++.
T Consensus 149 vh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~ 224 (245)
T COG4555 149 VHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDART 224 (245)
T ss_pred hcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHH
Confidence 99999999999999999999999999998875 48999999999999985 9999999999999999999998754
No 329
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1e-35 Score=338.44 Aligned_cols=175 Identities=27% Similarity=0.408 Sum_probs=131.5
Q ss_pred EeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCC-CCCcccHHHhcCcCC--
Q 000475 1243 TFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDP-MLFQGTVRTNLDPLE-- 1319 (1470)
Q Consensus 1243 ~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp-~LF~gTIR~NLdp~~-- 1319 (1470)
+|..||.+|++||||-||||+++.|.|.++|++|. ..++ +++|=||-- .-|+|||++-|.--.
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~~----------~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EEDL----------KVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Cccc----------eEeecceeecCCCCCcHHHHHHHhhhh
Confidence 45678999999999999999999999999999998 2222 689999942 238999998874211
Q ss_pred CCCHHHHH-HHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHH
Q 000475 1320 QHSDQEIW-EVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQT 1398 (1470)
Q Consensus 1320 ~~sd~eI~-~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~ 1398 (1470)
.+.+.-.+ +..+-.+|.+ -+|.+| .+|||||.||+++|-||.|++++.+||||+|.||.+-.-.+-++
T Consensus 429 ~~~~s~~~~ei~~pl~l~~-------i~e~~v----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakv 497 (591)
T COG1245 429 AFGSSYFKTEIVKPLNLED-------LLERPV----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKV 497 (591)
T ss_pred hcccchhHHhhcCccchHH-------HHhccc----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHH
Confidence 12222221 2222233322 234455 46999999999999999999999999999999999999999999
Q ss_pred HHHh--cCCcEEEEEecChhhhhh-cCEEEEEeC--CEEEEecChhHHh
Q 000475 1399 IREE--TSRCTVITVAHRIPTVID-NDLVLVLDE--GKVLEYDSPRQLL 1442 (1470)
Q Consensus 1399 I~~~--~~~~TVI~IAHRl~ti~~-~DrIlvL~~--G~vvE~g~p~~Ll 1442 (1470)
||+. ..++|.++|-|++-.+.- +||++|.+. |+=-....|..+.
T Consensus 498 IRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~GePg~~g~a~~P~~mr 546 (591)
T COG1245 498 IRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEGEPGKHGHASPPMSMR 546 (591)
T ss_pred HHHHHhhcCceEEEEecceehhhhhhceEEEEecCCCccCcCCCCccHH
Confidence 9874 367899999999998755 999999973 2222233455554
No 330
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=2.2e-36 Score=333.23 Aligned_cols=185 Identities=24% Similarity=0.353 Sum_probs=164.0
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcC--CCCCCcEEEEcCEeCCCCCHHHH-hcc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRV--VEPSGGRILIDGVDISMIGLQDL-RSR 1296 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl--~~p~~G~I~IDG~dI~~i~l~~L-R~~ 1296 (1470)
++++|++++|+. .++++|+||++++||.+||+|++|||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999963 3599999999999999999999999999999999999 58999999999999998876654 567
Q ss_pred cEEEccCCCCCcc-cHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCC
Q 000475 1297 LSIIPQDPMLFQG-TVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1375 (1470)
Q Consensus 1297 isiIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1375 (1470)
++|+||+|.+|.+ |+++|++ . ...+||+|||||++||||++++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l~------------------------~-----------~~~~LS~G~~qrv~laral~~~p 123 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFLR------------------------Y-----------VNEGFSGGEKKRNEILQLLLLEP 123 (200)
T ss_pred EEEeecChhhccCccHHHHHh------------------------h-----------ccccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999886 5666550 0 11369999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh--hcCEEEEEeCCEEEEecChhHHh
Q 000475 1376 RILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI--DNDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1376 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~--~~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
+||+|||||++||+.+...+.+.|++.. +++|+|+++|+++.+. .||++++|++|++++.| +.++.
T Consensus 124 ~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 124 DLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 9999999999999999999999998764 3789999999999988 59999999999999999 56665
No 331
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.1e-36 Score=309.54 Aligned_cols=197 Identities=26% Similarity=0.411 Sum_probs=167.6
Q ss_pred EEEeeeEEEeCCCccccCCCcccccCceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTDKMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK---------- 660 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~---------- 660 (1470)
+.+++++|+|+.. ...+ ++.|++||++||+||+||||||||+.|+|...|.+|++ .++|.
T Consensus 2 l~L~~V~~~y~~~-------~~~f--dl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i-~i~g~d~t~~~P~~R 71 (231)
T COG3840 2 LALDDVRFSYGHL-------PMRF--DLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEI-LINGVDHTASPPAER 71 (231)
T ss_pred ccccceEEeeCcc-------eEEE--EEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceE-EEcCeecCcCCcccC
Confidence 4567889998743 1111 58999999999999999999999999999999999996 88774
Q ss_pred -eEEEcCCCCCCC-ccHHHHHhcCCC-------CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHH
Q 000475 661 -KAYVPQSSWIQT-GTIRENILFGKD-------MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQL 731 (1470)
Q Consensus 661 -~ayv~Q~~~i~~-~Ti~eNI~~g~~-------~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 731 (1470)
+++++|+..+|. .||++||-+|.. .+.++.+.++...+|....+.+| .+|||||||||+|
T Consensus 72 PVSmlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvAL 140 (231)
T COG3840 72 PVSMLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVAL 140 (231)
T ss_pred ChhhhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHH
Confidence 689999999986 699999999953 24566777778888887777766 4899999999999
Q ss_pred HHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhhHHh
Q 000475 732 ARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLIA 808 (1470)
Q Consensus 732 ARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 808 (1470)
||++.++-+|+|||||||||||.-+.+... ++..+. ++.|+++|||+++.+.. +|+++++++|+|.++|+.+++..
T Consensus 141 ARclvR~~PilLLDEPFsALdP~LR~eMl~-Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~ 219 (231)
T COG3840 141 ARCLVREQPILLLDEPFSALDPALRAEMLA-LVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLS 219 (231)
T ss_pred HHHHhccCCeEEecCchhhcCHHHHHHHHH-HHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhc
Confidence 999999999999999999999998777654 344333 47899999999998765 99999999999999999999886
Q ss_pred h
Q 000475 809 D 809 (1470)
Q Consensus 809 ~ 809 (1470)
.
T Consensus 220 ~ 220 (231)
T COG3840 220 G 220 (231)
T ss_pred c
Confidence 3
No 332
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=9.9e-37 Score=342.85 Aligned_cols=203 Identities=23% Similarity=0.343 Sum_probs=169.0
Q ss_pred EEEEeEEEEeCCC--CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC---CCCcEEEEcCEeCCCCCHHHHh
Q 000475 1220 IELENLLVQYNPT--LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE---PSGGRILIDGVDISMIGLQDLR 1294 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~--~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~---p~~G~I~IDG~dI~~i~l~~LR 1294 (1470)
++|+||+++|+.. .+++++|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ....|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999765 3679999999999999999999999999999999999999 99999999999885 34678
Q ss_pred cccEEEccCCCCCcc-cHHHhcCcC---C--CCCHH-----HHHH-HHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000475 1295 SRLSIIPQDPMLFQG-TVRTNLDPL---E--QHSDQ-----EIWE-VINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1362 (1470)
Q Consensus 1295 ~~isiIpQdp~LF~g-TIR~NLdp~---~--~~sd~-----eI~~-aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQr 1362 (1470)
++++++||++.+|.+ |+++|+... . ...++ .+.+ .++..++.+ .......+||+|||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~ 149 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTR-----------IGGNLVKGISGGER 149 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchh-----------hhcccccCcCHHHH
Confidence 999999999999988 999999632 1 11111 1222 344443322 22233467999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCh-hhhh-hcCEEEEEeCCEEEEec
Q 000475 1363 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRI-PTVI-DNDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1363 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl-~ti~-~~DrIlvL~~G~vvE~g 1436 (1470)
||++|||||+++|++|+|||||++||+.+...+.+.|++.. +++|+|+++|++ ..+. .||+|++|++|++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999999999998764 478999999998 4554 59999999999999875
No 333
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.2e-36 Score=327.70 Aligned_cols=193 Identities=31% Similarity=0.398 Sum_probs=156.5
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++..|.... .....|++ ||+|++||+++|+||+||||||||++|.|...|++|.+ .++|
T Consensus 2 i~~~~v~k~y~~~~----~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v-~i~g~d~~~l~~~~ 76 (226)
T COG1136 2 IELKNVSKIYGLGG----EKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEV-LINGKDLTKLSEKE 76 (226)
T ss_pred cEEeeeEEEeccCC----cceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceE-EECCEEcCcCCHHH
Confidence 56788888887541 22567899 99999999999999999999999999999999999986 7777
Q ss_pred -------EeEEEcCCCC-CCCccHHHHHhcCCCC----C---HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchH
Q 000475 660 -------KKAYVPQSSW-IQTGTIRENILFGKDM----R---QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1470)
Q Consensus 660 -------~~ayv~Q~~~-i~~~Ti~eNI~~g~~~----~---~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 724 (1470)
.+|||+|+.. +++.|++|||.+...+ . .++.++.++..+|.+... ..++.+||||
T Consensus 77 ~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGG 146 (226)
T COG1136 77 LAKLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGG 146 (226)
T ss_pred HHHHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHH
Confidence 2699999966 5778999999964221 1 233344444444443222 2457799999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCEEE
Q 000475 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDAADLVLVMKDGKIE 798 (1470)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~ 798 (1470)
|||||||||||+.+|+++|.||||.+||.++++.+++-+..... .|+|+|+||||.+....|||++.|+||++.
T Consensus 147 qqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 147 QQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 99999999999999999999999999999999999875443322 378999999999999999999999999954
No 334
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-36 Score=347.96 Aligned_cols=208 Identities=25% Similarity=0.376 Sum_probs=176.4
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHh-ccc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLR-SRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR-~~i 1297 (1470)
.|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..+ +++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~----~~~~~~i 80 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ----ALQKNLV 80 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH----hhccceE
Confidence 58999999999633 459999999999999999999999999999999999999999999999998752 233 469
Q ss_pred EEEccCCCC---CcccHHHhcCcC--------C---CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000475 1298 SIIPQDPML---FQGTVRTNLDPL--------E---QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1363 (1470)
Q Consensus 1298 siIpQdp~L---F~gTIR~NLdp~--------~---~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQ 1363 (1470)
+|+||+|.+ +..++++|+... . ...++.+.++++..++.+.. |+.+ .+|||||||
T Consensus 81 ~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~~~~----~~LSgG~~q 149 (272)
T PRK15056 81 AYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFR-------HRQI----GELSGGQKK 149 (272)
T ss_pred EEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHh-------cCCc----ccCCHHHHH
Confidence 999999865 456889987521 0 11234567788888886643 3333 469999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000475 1364 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1441 (1470)
Q Consensus 1364 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~L 1441 (1470)
|++|||||+++|+||+|||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+++++ +|++++.|+++++
T Consensus 150 rv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~ 228 (272)
T PRK15056 150 RVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETT 228 (272)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhc
Confidence 9999999999999999999999999999999999998764 47899999999998865 9999777 8999999999998
Q ss_pred hh
Q 000475 1442 LE 1443 (1470)
Q Consensus 1442 l~ 1443 (1470)
.+
T Consensus 229 ~~ 230 (272)
T PRK15056 229 FT 230 (272)
T ss_pred cC
Confidence 64
No 335
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-36 Score=336.93 Aligned_cols=200 Identities=23% Similarity=0.362 Sum_probs=170.1
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCC----CHHHHhc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI----GLQDLRS 1295 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~~LR~ 1295 (1470)
+++ |++++|+.. .+ |+||+|++ |++||+|+||||||||+++|.|+++|++|+|.+||.++... +....|+
T Consensus 2 ~~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 2 LCV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred cee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhh
Confidence 355 899999753 24 99999999 99999999999999999999999999999999999998643 2345788
Q ss_pred ccEEEccCCCCCcc-cHHHhcCcC-CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1296 RLSIIPQDPMLFQG-TVRTNLDPL-EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1296 ~isiIpQdp~LF~g-TIR~NLdp~-~~~----sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
+++|+||++.+|.+ |+++|+... ..+ .++++.++++..++.+... ....+||||||||++|||
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~ 144 (214)
T cd03297 76 KIGLVFQQYALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDHLLN-----------RYPAQLSGGEKQRVALAR 144 (214)
T ss_pred cEEEEecCCccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHhHhh-----------cCcccCCHHHHHHHHHHH
Confidence 99999999999865 999999642 211 2345677788777755432 234579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
|++++|++|+|||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 145 ALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999988642 7899999999999865 9999999999998875
No 336
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=8.4e-36 Score=341.60 Aligned_cols=214 Identities=29% Similarity=0.368 Sum_probs=188.7
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1470)
..++++|++++|+.. ....+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 18 ~~i~~~~l~~~~~~~------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~i~g~~i~~~~~ 90 (257)
T cd03288 18 GEIKIHDLCVRYENN------LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKI-VIDGIDISKLPL 90 (257)
T ss_pred ceEEEEEEEEEeCCC------CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeE-EECCEEhhhCCH
Confidence 469999999999742 2357889 99999999999999999999999999999999999986 6655
Q ss_pred -----EeEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHH
Q 000475 660 -----KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARA 734 (1470)
Q Consensus 660 -----~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARA 734 (1470)
.++|++|+|+++++|++||+........+.+.++++..++.+.++.+|.|.++.+++.+.+||||||||++||||
T Consensus 91 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~lara 170 (257)
T cd03288 91 HTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARA 170 (257)
T ss_pred HHHhhhEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHH
Confidence 379999999999999999998764444556677778888888899999999999999999999999999999999
Q ss_pred HccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHHhhc
Q 000475 735 VYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQ 810 (1470)
Q Consensus 735 l~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 810 (1470)
++++|++++|||||++||+++...+++ ++..+.+++|+|++||+++.+..||+|++|++|++++.|+++++.+..
T Consensus 171 l~~~p~llllDEPt~gLD~~~~~~l~~-~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 245 (257)
T cd03288 171 FVRKSSILIMDEATASIDMATENILQK-VVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQE 245 (257)
T ss_pred HhcCCCEEEEeCCccCCCHHHHHHHHH-HHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhcc
Confidence 999999999999999999998776654 555555689999999999998889999999999999999999887633
No 337
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-36 Score=337.03 Aligned_cols=210 Identities=29% Similarity=0.467 Sum_probs=185.0
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+.. .+.+++ ||++++|++++|+||||||||||+++|+|+.+|++|++ .++|
T Consensus 2 ~l~~~~l~~~~~~~-------~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~ 73 (229)
T cd03254 2 EIEFENVNFSYDEK-------KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQI-LIDGIDIRDISRK 73 (229)
T ss_pred eEEEEEEEEecCCC-------CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEE-EECCEeHHHcCHH
Confidence 47899999999632 357889 99999999999999999999999999999999999986 6665
Q ss_pred ----EeEEEcCCCCCCCccHHHHHhcCCCC-CHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHH
Q 000475 660 ----KKAYVPQSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARA 734 (1470)
Q Consensus 660 ----~~ayv~Q~~~i~~~Ti~eNI~~g~~~-~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARA 734 (1470)
.++|++|+++++..|++||+.++.+. ..++.++.++.+++.+.++.+|.|..+..+.+..+|||||||||+||||
T Consensus 74 ~~~~~i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~a 153 (229)
T cd03254 74 SLRSMIGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARA 153 (229)
T ss_pred HHhhhEEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHH
Confidence 37999999999888999999987543 3455666777888888888999888888889999999999999999999
Q ss_pred HccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHHh
Q 000475 735 VYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIA 808 (1470)
Q Consensus 735 l~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 808 (1470)
++++|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.++.||+|++|++|++.+.|+++++..
T Consensus 154 l~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 154 MLRDPKILILDEATSNIDTETEKLIQE-ALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred HhcCCCEEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 999999999999999999999888765 4555556899999999999988899999999999999998877754
No 338
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-36 Score=332.58 Aligned_cols=190 Identities=25% Similarity=0.315 Sum_probs=161.9
Q ss_pred cEEEEeEEEEeCCC--CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCC---CCCcEEEEcCEeCCCCCHHHH
Q 000475 1219 KIELENLLVQYNPT--LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE---PSGGRILIDGVDISMIGLQDL 1293 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~--~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~---p~~G~I~IDG~dI~~i~l~~L 1293 (1470)
.+.++|++|.|+.+ ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 46799999999753 4579999999999999999999999999999999999999 89999999999998764 457
Q ss_pred hcccEEEccCCCCCcc-cHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHc
Q 000475 1294 RSRLSIIPQDPMLFQG-TVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLL 1372 (1470)
Q Consensus 1294 R~~isiIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL 1372 (1470)
|++++|+||++.+|.+ |+++|+...... . .+.. ...||+|||||++|||||+
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~---------~--------------~~~~----~~~LS~Ge~qrl~laral~ 134 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC---------K--------------GNEF----VRGISGGERKRVSIAEALV 134 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh---------c--------------cccc----hhhCCHHHHHHHHHHHHHh
Confidence 8899999999988875 999999642110 0 2222 3469999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEe-cChhhhh-hcCEEEEEeCCEEEEec
Q 000475 1373 KKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVA-HRIPTVI-DNDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1373 r~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IA-HRl~ti~-~~DrIlvL~~G~vvE~g 1436 (1470)
++|++|+|||||++||+++.+.+.+.|++..+ ++|+|+++ |+.+.+. .||+|++|++|++++.|
T Consensus 135 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 135 SRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 99999999999999999999999999998643 46766655 5566765 59999999999998865
No 339
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=2.8e-36 Score=330.68 Aligned_cols=182 Identities=27% Similarity=0.415 Sum_probs=161.4
Q ss_pred cEEEEeEEEEeCCC----CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCC--CCCCcEEEEcCEeCCCCCHHH
Q 000475 1219 KIELENLLVQYNPT----LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV--EPSGGRILIDGVDISMIGLQD 1292 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~----~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~--~p~~G~I~IDG~dI~~i~l~~ 1292 (1470)
.|+++|++++|+.. ..++|+|+||++++||++||+|++|||||||+++|.|++ +|++|+|.+||.++.. .+
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 58999999999752 246999999999999999999999999999999999999 9999999999999875 36
Q ss_pred HhcccEEEccCCCCCcc-cHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHH
Q 000475 1293 LRSRLSIIPQDPMLFQG-TVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1371 (1470)
Q Consensus 1293 LR~~isiIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1371 (1470)
.|++++++||++.+|.+ |+++|+... . .. + .||+|||||++|||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~---------~---~~-------------~--------~LS~G~~qrv~laral 126 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFA---------A---KL-------------R--------GLSGGERKRVSIALEL 126 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHH---------H---Hh-------------c--------cCCHHHHHHHHHHHHH
Confidence 78899999999998875 999998421 0 00 0 6999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChh-hhhh-cCEEEEEeCCEEEEec
Q 000475 1372 LKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIP-TVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1372 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~-ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
+++|++++|||||++||..+.+.+.+.|++.. +++|+|+++|+++ .+.+ ||+|++|++|++++.|
T Consensus 127 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 127 VSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred HcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999864 4799999999997 4544 9999999999998764
No 340
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=2.7e-36 Score=327.66 Aligned_cols=172 Identities=27% Similarity=0.481 Sum_probs=156.7
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCH-HHHhccc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL-QDLRSRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l-~~LR~~i 1297 (1470)
.|+++|++++| +|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999998 8999999999999999999999999999999999999999999999999998874 4578899
Q ss_pred EEEccCC----CCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHcc
Q 000475 1298 SIIPQDP----MLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1373 (1470)
Q Consensus 1298 siIpQdp----~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1373 (1470)
+|+||+| .++..|+++|+..... ||+|||||++||||+++
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~------------------------------------LS~G~~qrl~la~al~~ 121 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL------------------------------------LSGGNQQKVVLARWLAR 121 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh------------------------------------cCHHHHHHHHHHHHHcc
Confidence 9999995 3445799999864210 99999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEE
Q 000475 1374 KKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKV 1432 (1470)
Q Consensus 1374 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~v 1432 (1470)
+|++|+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++
T Consensus 122 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 122 DPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999764 47999999999999977 999999999974
No 341
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=6.6e-36 Score=341.97 Aligned_cols=212 Identities=22% Similarity=0.280 Sum_probs=178.2
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcC--CCCCCcEEEEcCEeCCCCCHHHHhc-
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRV--VEPSGGRILIDGVDISMIGLQDLRS- 1295 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl--~~p~~G~I~IDG~dI~~i~l~~LR~- 1295 (1470)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++..++.+..++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 4899999999964 3599999999999999999999999999999999998 6899999999999999888766554
Q ss_pred ccEEEccCCCCCcc-cHHHhcCcC-C------C---CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChh
Q 000475 1296 RLSIIPQDPMLFQG-TVRTNLDPL-E------Q---HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVG 1360 (1470)
Q Consensus 1296 ~isiIpQdp~LF~g-TIR~NLdp~-~------~---~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgG 1360 (1470)
.++++||+|.+|.+ |+++|+... . . .+ .+++.++|+.+++.+. .++..+. ..||||
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~~---~~LSgG 155 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPS------FLSRNVN---EGFSGG 155 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchh------hhccccc---cCCCHH
Confidence 58999999999987 789987531 1 0 01 1335567777776421 1233332 249999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh--cCEEEEEeCCEEEEecC
Q 000475 1361 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID--NDLVLVLDEGKVLEYDS 1437 (1470)
Q Consensus 1361 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~--~DrIlvL~~G~vvE~g~ 1437 (1470)
||||++|||||+++|+||+|||||++||..+...+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+
T Consensus 156 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~ 235 (252)
T CHL00131 156 EKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGD 235 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecC
Confidence 9999999999999999999999999999999999999998764 47999999999999875 89999999999999999
Q ss_pred hhHH
Q 000475 1438 PRQL 1441 (1470)
Q Consensus 1438 p~~L 1441 (1470)
|+.+
T Consensus 236 ~~~~ 239 (252)
T CHL00131 236 AELA 239 (252)
T ss_pred hhhh
Confidence 9843
No 342
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.2e-35 Score=336.89 Aligned_cols=211 Identities=32% Similarity=0.476 Sum_probs=182.8
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|+++.|+.. ...+.+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~i~~l~~~~~~~-----~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i-~~~g~~~~~~~~~~ 74 (238)
T cd03249 1 IEFKNVSFRYPSR-----PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEI-LLDGVDIRDLNLRW 74 (238)
T ss_pred CeEEEEEEecCCC-----CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEE-EECCEehhhcCHHH
Confidence 4688999999643 22467889 99999999999999999999999999999999999986 6665
Q ss_pred ---EeEEEcCCCCCCCccHHHHHhcCCCC-CHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHH
Q 000475 660 ---KKAYVPQSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAV 735 (1470)
Q Consensus 660 ---~~ayv~Q~~~i~~~Ti~eNI~~g~~~-~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 735 (1470)
.++|++|++.+++.|++||+.++... ..+...+.++.+++.+.++.+|.|..+..+....+||||||||++||||+
T Consensus 75 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al 154 (238)
T cd03249 75 LRSQIGLVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARAL 154 (238)
T ss_pred HHhhEEEECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHH
Confidence 37999999998888999999987543 33445566777788777888888888888888999999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHHh
Q 000475 736 YSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIA 808 (1470)
Q Consensus 736 ~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 808 (1470)
+.+|+++||||||++||+++...+.+ ++..+.+++|+|++||+++++..||+|++|++|++++.|+.+++..
T Consensus 155 ~~~p~llllDEP~~gLD~~~~~~l~~-~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (238)
T cd03249 155 LRNPKILLLDEATSALDAESEKLVQE-ALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMA 226 (238)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhh
Confidence 99999999999999999999887765 4544447899999999999988899999999999999998887765
No 343
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=335.98 Aligned_cols=210 Identities=31% Similarity=0.490 Sum_probs=183.9
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+.. ..+.+++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 1 i~~~~l~~~~~~~------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~~ 73 (234)
T cd03251 1 VEFKNVTFRYPGD------GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRI-LIDGHDVRDYTLAS 73 (234)
T ss_pred CEEEEEEEEeCCC------CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEE-EECCEEhhhCCHHH
Confidence 4688999999643 2357888 99999999999999999999999999999999999986 6665
Q ss_pred ---EeEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHH
Q 000475 660 ---KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAV 735 (1470)
Q Consensus 660 ---~~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 735 (1470)
.++|++|++++++.|++||+.++.+ .....+.+.++.+.+.+.++.++.|..+..+.++.+||||||||++||||+
T Consensus 74 ~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al 153 (234)
T cd03251 74 LRRQIGLVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARAL 153 (234)
T ss_pred HHhhEEEeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHH
Confidence 2799999999998999999998754 344556666777788888889988888888899999999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHHh
Q 000475 736 YSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIA 808 (1470)
Q Consensus 736 ~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 808 (1470)
+.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+..||+|++|++|++++.|+.+++..
T Consensus 154 ~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 225 (234)
T cd03251 154 LKDPPILILDEATSALDTESERLVQA-ALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLA 225 (234)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHH
Confidence 99999999999999999999887765 5655556899999999999988899999999999999999888765
No 344
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=4.1e-36 Score=325.60 Aligned_cols=177 Identities=32% Similarity=0.525 Sum_probs=161.1
Q ss_pred EEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEE
Q 000475 1221 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSII 1300 (1470)
Q Consensus 1221 ~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiI 1300 (1470)
+++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 47899999964 3599999999999999999999999999999999999999999999999999988888889999999
Q ss_pred ccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000475 1301 PQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVL 1380 (1470)
Q Consensus 1301 pQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlL 1380 (1470)
|| +++.+++.++... .+.+||+|||||++||||++++|++++|
T Consensus 79 ~q--------------------------~l~~~gl~~~~~~-----------~~~~LS~G~~qrl~laral~~~p~llll 121 (180)
T cd03214 79 PQ--------------------------ALELLGLAHLADR-----------PFNELSGGERQRVLLARALAQEPPILLL 121 (180)
T ss_pred HH--------------------------HHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99 7788888765432 2357999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1381 DEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1381 DEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
||||++||+++.+.+.+.|++..+ ++|+|+++|+++.+.+ ||++++|++|++++.|
T Consensus 122 DEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 122 DEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999987654 7899999999999855 9999999999998754
No 345
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=3.6e-36 Score=339.18 Aligned_cols=206 Identities=22% Similarity=0.346 Sum_probs=170.8
Q ss_pred ceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC----CCcEEEEcCEeCCCCCHHHHhcccEEEccCCC-CCc--
Q 000475 1236 VLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP----SGGRILIDGVDISMIGLQDLRSRLSIIPQDPM-LFQ-- 1308 (1470)
Q Consensus 1236 vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p----~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~-LF~-- 1308 (1470)
+++|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... ...+++++|+||+|. .|.
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 58999999999999999999999999999999999999 899999999998754 223468999999995 343
Q ss_pred ccHHHhcCc----CCCC---CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000475 1309 GTVRTNLDP----LEQH---SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLD 1381 (1470)
Q Consensus 1309 gTIR~NLdp----~~~~---sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLD 1381 (1470)
-|+++|+.. .+.. .++++.++++.+++.+. +........+||+|||||++||||++++|+||+||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLD 150 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQARALILEALEAVGLPDP--------EEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIAD 150 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCch--------HHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 488888631 1111 23457788888887521 01122334579999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHHH
Q 000475 1382 EATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFSK 1451 (1470)
Q Consensus 1382 EaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s~f~~ 1451 (1470)
|||++||..+...+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|++++++..+...|.+
T Consensus 151 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 223 (230)
T TIGR02770 151 EPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETTR 223 (230)
T ss_pred CCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHHH
Confidence 99999999999999999998643 7899999999999975 9999999999999999999998766555554
No 346
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2.8e-36 Score=334.46 Aligned_cols=193 Identities=25% Similarity=0.348 Sum_probs=165.1
Q ss_pred EEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCH----HHHhccc
Q 000475 1222 LENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL----QDLRSRL 1297 (1470)
Q Consensus 1222 ~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l----~~LR~~i 1297 (1470)
++|++++|++ .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4689999964 359999999999999999999999999999999999999999999999999875542 2467899
Q ss_pred EEEccCCCCCc-ccHHHhcCcC---CC----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1298 SIIPQDPMLFQ-GTVRTNLDPL---EQ----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1298 siIpQdp~LF~-gTIR~NLdp~---~~----~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
+++||+|.+|. .|+++|+... .. ..++++.++++..++.+.. |.. ..+||+|||||++|||
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~lS~G~~qr~~lar 147 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKL-------KQK----IYELSGGEQQRVALAR 147 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhh-------cCC----hhhCCHHHHHHHHHHH
Confidence 99999999997 5999999641 11 1245577788888875543 222 3569999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEEEE
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVLVL 1427 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~~DrIlvL 1427 (1470)
||+++|++|+|||||++||+++.+.+.+.|++.. ++.|+|+++|+++.+..||+|++|
T Consensus 148 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 148 AILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999999999998864 478999999999988779999875
No 347
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=334.68 Aligned_cols=209 Identities=33% Similarity=0.535 Sum_probs=183.0
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE---------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK--------- 660 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~--------- 660 (1470)
++++|++++|+.+ ...+++ ||++++|++++|+|+||||||||+++|+|+.+|++|++ .++|.
T Consensus 1 l~~~~l~~~~~~~-------~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v-~~~g~~~~~~~~~~ 72 (236)
T cd03253 1 IEFENVTFAYDPG-------RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSI-LIDGQDIREVTLDS 72 (236)
T ss_pred CEEEEEEEEeCCC-------CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEE-EECCEEhhhCCHHH
Confidence 4688999999632 357888 99999999999999999999999999999999999986 77662
Q ss_pred ----eEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHH
Q 000475 661 ----KAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAV 735 (1470)
Q Consensus 661 ----~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 735 (1470)
++|++|++++++.|++||+.++.. .......+.++.+++.+.++.++.|..+.++.++.+||||||||++|||||
T Consensus 73 ~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL 152 (236)
T cd03253 73 LRRAIGVVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAI 152 (236)
T ss_pred HHhhEEEECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHH
Confidence 799999999999999999998754 233445566777888888899999988989999999999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHHh
Q 000475 736 YSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIA 808 (1470)
Q Consensus 736 ~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 808 (1470)
+++|+++||||||++||+++...+.+ ++..+.+++|+|++||+++.+..||++++|++|++.+.|+.+++..
T Consensus 153 ~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~ 224 (236)
T cd03253 153 LKNPPILLLDEATSALDTHTEREIQA-ALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA 224 (236)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999887765 4555445899999999999998899999999999999998888765
No 348
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.6e-35 Score=332.00 Aligned_cols=205 Identities=29% Similarity=0.398 Sum_probs=182.5
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+.. ..+.+++ ||++++|++++|+|+||||||||+++|+|+.+|++|++ .++|
T Consensus 2 ~l~~~~l~~~~~~~------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~ 74 (221)
T cd03244 2 DIEFKNVSLRYRPN------LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSI-LIDGVDISKIGLH 74 (221)
T ss_pred cEEEEEEEEecCCC------CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEE-EECCEEhHhCCHH
Confidence 37899999999743 2467899 99999999999999999999999999999999999986 6655
Q ss_pred ----EeEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHH
Q 000475 660 ----KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAV 735 (1470)
Q Consensus 660 ----~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 735 (1470)
.++|++|++.+++.|++||+.+......++..+.++..++.+.+..++.|..+..++.+.+||||||||++||||+
T Consensus 75 ~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral 154 (221)
T cd03244 75 DLRSRISIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARAL 154 (221)
T ss_pred HHhhhEEEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHH
Confidence 3699999999998999999987766666667777888889888899999999999999999999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecC
Q 000475 736 YSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGK 802 (1470)
Q Consensus 736 ~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~ 802 (1470)
+.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 155 ~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 155 LRKSKILVLDEATASVDPETDALIQK-TIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999999999877765 4555556789999999999998899999999999988765
No 349
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=6.9e-36 Score=319.21 Aligned_cols=164 Identities=34% Similarity=0.422 Sum_probs=150.6
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+.+ +++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999644 45999999999999999999999999999999999999999999999983 68999
Q ss_pred EccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000475 1300 IPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILV 1379 (1470)
Q Consensus 1300 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILl 1379 (1470)
+||+|.++++|+++|+... ....||+|||||++||||++++|++++
T Consensus 69 ~~q~~~~~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~ll 114 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVF 114 (166)
T ss_pred ECCCCccccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999998642 235799999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCE
Q 000475 1380 LDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGK 1431 (1470)
Q Consensus 1380 LDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrIlvL~~G~ 1431 (1470)
|||||++||+++.+.+.+.|++. ++|+|++||+++....||+|++|++|-
T Consensus 115 lDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 115 LDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred EECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 99999999999999999999986 589999999999877899999998864
No 350
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-36 Score=328.88 Aligned_cols=181 Identities=23% Similarity=0.320 Sum_probs=160.1
Q ss_pred cEEEEeEEEEeCCC--CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCC--CCCCcEEEEcCEeCCCCCHHHHh
Q 000475 1219 KIELENLLVQYNPT--LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV--EPSGGRILIDGVDISMIGLQDLR 1294 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~--~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~--~p~~G~I~IDG~dI~~i~l~~LR 1294 (1470)
.|+++|++++|+++ ..++|+|+||++++||++||+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 48999999999642 246999999999999999999999999999999999986 489999999999986 5678
Q ss_pred cccEEEccCCCCCcc-cHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHcc
Q 000475 1295 SRLSIIPQDPMLFQG-TVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1373 (1470)
Q Consensus 1295 ~~isiIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1373 (1470)
++++++||+|.+|.+ |+++|+... ..++ +||||||||++||||+++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~---------~~~~------------------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFS---------ALLR------------------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHH---------HHHh------------------------cCCHHHhHHHHHHHHHhc
Confidence 899999999988875 999998621 0000 699999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhh-h-hhcCEEEEEeC-CEEEEec
Q 000475 1374 KKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPT-V-IDNDLVLVLDE-GKVLEYD 1436 (1470)
Q Consensus 1374 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~t-i-~~~DrIlvL~~-G~vvE~g 1436 (1470)
+|++|+|||||+++|+++...+.+.|++.. +++|+|+|+|+++. + ..||+|++|++ |++++.|
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999999999999999999764 47999999999984 4 55999999999 9999875
No 351
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=353.42 Aligned_cols=202 Identities=27% Similarity=0.401 Sum_probs=168.7
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE--------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------- 660 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------- 660 (1470)
.++++|++++|+.+ ...+++ ||++++|++++|+|||||||||||++|+|+.+|++|++ .++|.
T Consensus 3 ~l~i~~l~~~~~~~-------~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I-~~~g~~i~~~~~~ 74 (356)
T PRK11650 3 GLKLQAVRKSYDGK-------TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEI-WIGGRVVNELEPA 74 (356)
T ss_pred EEEEEeEEEEeCCC-------CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEE-EECCEECCCCCHH
Confidence 37899999999422 357888 99999999999999999999999999999999999996 77763
Q ss_pred ---eEEEcCCCCCC-CccHHHHHhcCCCC---CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHH
Q 000475 661 ---KAYVPQSSWIQ-TGTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1470)
Q Consensus 661 ---~ayv~Q~~~i~-~~Ti~eNI~~g~~~---~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 729 (1470)
+|||+|++.++ +.||+|||.|+... +. ++.+++++..++.+.. +....+|||||||||
T Consensus 75 ~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LSgGq~QRv 143 (356)
T PRK11650 75 DRDIAMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLL-----------DRKPRELSGGQRQRV 143 (356)
T ss_pred HCCEEEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHh-----------hCChhhCCHHHHHHH
Confidence 79999999987 46999999998542 21 2344555555554332 355679999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhhH
Q 000475 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYEDL 806 (1470)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 806 (1470)
+|||||+.+|+++|||||||+||+.+...+.+.+ +.+. + +.|+|+||||++++. .||+|++|++|++++.|+++++
T Consensus 144 alARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l-~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~ 222 (356)
T PRK11650 144 AMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEI-QRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEV 222 (356)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHH
Confidence 9999999999999999999999999988887654 4333 2 789999999999876 4999999999999999999998
Q ss_pred Hhhch
Q 000475 807 IADQN 811 (1470)
Q Consensus 807 ~~~~~ 811 (1470)
..++.
T Consensus 223 ~~~p~ 227 (356)
T PRK11650 223 YEKPA 227 (356)
T ss_pred HhCCc
Confidence 76443
No 352
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.1e-35 Score=338.73 Aligned_cols=205 Identities=23% Similarity=0.328 Sum_probs=175.4
Q ss_pred EEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEE
Q 000475 1221 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSII 1300 (1470)
Q Consensus 1221 ~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiI 1300 (1470)
+++||++. .+|+|+||+|++||++||+|+||||||||+++|.|+++ .+|+|.+||.++...+...+|+.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-GSGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-CCeEEEECCEecCcCCHHHHhhheEEe
Confidence 56777774 27999999999999999999999999999999999985 599999999999988888888899999
Q ss_pred ccCCC-CCcccHHHhcCcCCC--CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHcc
Q 000475 1301 PQDPM-LFQGTVRTNLDPLEQ--HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1373 (1470)
Q Consensus 1301 pQdp~-LF~gTIR~NLdp~~~--~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1373 (1470)
||+|. .+..|+++|+..... .+ ++++.++++..++.+.. +. ....||+|||||++|||||++
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~----~~~~LS~G~~qrv~la~al~~ 143 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAVASALNEVAEALGLDDKL-------GR----SVNQLSGGEWQRVRLAAVVLQ 143 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHHHHHHHHHHHHcCCHhHh-------cC----CcccCCHHHHHHHHHHHHHhc
Confidence 99985 456799999974321 11 23566777777775433 22 235699999999999999997
Q ss_pred -------CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1374 -------KKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1374 -------~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
+|++|+|||||++||+.+...+.+.|++.. +++|||+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 144 ~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 222 (248)
T PRK03695 144 VWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLT 222 (248)
T ss_pred cccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhC
Confidence 679999999999999999999999998764 47899999999998765 99999999999999999999875
No 353
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-36 Score=331.83 Aligned_cols=199 Identities=32% Similarity=0.484 Sum_probs=171.8
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|.+|+|+++ .+.+++ |+++++|+.++|+|+||||||||++++.|.++|++|.+ .++|
T Consensus 3 ~i~~~~l~~~y~~~-------~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v-~~~g~~~~~~~~~ 74 (235)
T COG1122 3 MIEAENLSFRYPGR-------KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEV-LVDGLDTSSEKSL 74 (235)
T ss_pred eEEEEEEEEEcCCC-------ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEE-EECCeeccchhhH
Confidence 47899999999853 578889 99999999999999999999999999999999999987 6655
Q ss_pred -----EeEEEcCCC--CCCCccHHHHHhcCCCC---C----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 660 -----KKAYVPQSS--WIQTGTIRENILFGKDM---R----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 660 -----~~ayv~Q~~--~i~~~Ti~eNI~~g~~~---~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
++|||+|+| .++..||.|.+.||... . +++.+++++.|++.+..+ ....+|||||
T Consensus 75 ~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~-----------r~p~~LSGGq 143 (235)
T COG1122 75 LELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLD-----------RPPFNLSGGQ 143 (235)
T ss_pred HHhhcceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhcc-----------CCccccCCcc
Confidence 379999999 57889999999999642 2 245566777787765533 4567999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecC
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~ 802 (1470)
||||+||.+|..+|++++||||||+||+...+.+.+. +..+. . ++|+|++|||++.+.. ||++++|++|+++.+|+
T Consensus 144 kqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~-l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~ 222 (235)
T COG1122 144 KQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLEL-LKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGD 222 (235)
T ss_pred eeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHH-HHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCC
Confidence 9999999999999999999999999999998888764 44443 3 5899999999999876 99999999999999999
Q ss_pred hhhHHh
Q 000475 803 YEDLIA 808 (1470)
Q Consensus 803 ~~~l~~ 808 (1470)
++++.+
T Consensus 223 p~~i~~ 228 (235)
T COG1122 223 PAEIFN 228 (235)
T ss_pred HHHHhh
Confidence 988876
No 354
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-36 Score=319.45 Aligned_cols=201 Identities=25% Similarity=0.370 Sum_probs=166.7
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1470)
..|+++|++..|+.+ ...|++ ||+|++||+++|+|++||||||||++|.|..+|++|++ .++|
T Consensus 2 ~~i~~~nl~k~yp~~-------~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i-~~~g~~i~~~~~ 73 (258)
T COG3638 2 MMIEVKNLSKTYPGG-------HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEI-LFNGVQITKLKG 73 (258)
T ss_pred ceEEEeeeeeecCCC-------ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceE-Eecccchhccch
Confidence 358999999999843 578899 99999999999999999999999999999999999986 6666
Q ss_pred --------EeEEEcCCCCC-CCccHHHHHhcCCCC------------CHHHHHHHH---HHhcchHHHHhccCCCccccc
Q 000475 660 --------KKAYVPQSSWI-QTGTIRENILFGKDM------------RQSFYEEVL---EGCALNQDIEMWADGDLSVVG 715 (1470)
Q Consensus 660 --------~~ayv~Q~~~i-~~~Ti~eNI~~g~~~------------~~~~y~~v~---~~~~l~~d~~~l~~g~~t~ig 715 (1470)
++||++|++-| +..||.+|++.|+-- .++....++ +..++.+ ..-
T Consensus 74 k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~-----------~A~ 142 (258)
T COG3638 74 KELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILD-----------KAY 142 (258)
T ss_pred HHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHH-----------HHH
Confidence 36999999876 567999999988532 222222222 2223222 223
Q ss_pred CCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhh-hcCEEEEEe
Q 000475 716 ERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLD-AADLVLVMK 793 (1470)
Q Consensus 716 ~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~-~~d~i~~l~ 793 (1470)
.+..+|||||+|||+|||||+++|+|+|-|||+++|||.+++++++.+.+.. ..|.|+|+.-|+++... +||||+-|+
T Consensus 143 qra~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~ 222 (258)
T COG3638 143 QRASTLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLK 222 (258)
T ss_pred HHhccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEec
Confidence 5778999999999999999999999999999999999999999987654322 35899999999999975 599999999
Q ss_pred CCEEEEecChhhHHh
Q 000475 794 DGKIEQSGKYEDLIA 808 (1470)
Q Consensus 794 ~G~i~~~g~~~~l~~ 808 (1470)
+|+|+++|+.+|+.+
T Consensus 223 ~G~ivfDg~~~el~~ 237 (258)
T COG3638 223 AGRIVFDGPASELTD 237 (258)
T ss_pred CCcEEEeCChhhhhH
Confidence 999999999998644
No 355
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.5e-35 Score=349.26 Aligned_cols=204 Identities=25% Similarity=0.352 Sum_probs=167.3
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
|+++|++++|+..+ .....+++ ||++++||+++|+|+||||||||+++|+|+.+|++|++ .++|
T Consensus 2 I~~~~lsk~y~~~~----~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I-~i~G~~i~~~~~~~ 76 (343)
T TIGR02314 2 IKLSNITKVFHQGT----KTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSV-IVDGQDLTTLSNSE 76 (343)
T ss_pred EEEEEEEEEECCCC----cceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEE-EECCEECCcCCHHH
Confidence 78999999996420 12467899 99999999999999999999999999999999999986 6655
Q ss_pred ------EeEEEcCCCCCCC-ccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 660 ------KKAYVPQSSWIQT-GTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
.++|++|++.++. .|++|||.++.. .+. ++..++++..+|.+. .+..+.+|||||
T Consensus 77 l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~-----------~~~~~~~LSgGq 145 (343)
T TIGR02314 77 LTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDK-----------HDSYPSNLSGGQ 145 (343)
T ss_pred HHHHhcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHH
Confidence 3799999998874 799999998643 222 222334444444322 335677999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecC
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~ 802 (1470)
||||+|||||..+|+++|||||||+||+.+...+.+. ++.+. + +.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 146 kQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~l-L~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~ 224 (343)
T TIGR02314 146 KQRVAIARALASNPKVLLCDEATSALDPATTQSILEL-LKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGT 224 (343)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcC
Confidence 9999999999999999999999999999999888764 44443 2 7899999999999865 99999999999999999
Q ss_pred hhhHHhhch
Q 000475 803 YEDLIADQN 811 (1470)
Q Consensus 803 ~~~l~~~~~ 811 (1470)
++++...+.
T Consensus 225 ~~~v~~~p~ 233 (343)
T TIGR02314 225 VSEIFSHPK 233 (343)
T ss_pred HHHHHcCCC
Confidence 999876433
No 356
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=356.13 Aligned_cols=229 Identities=24% Similarity=0.419 Sum_probs=192.9
Q ss_pred cEEEEeEEEEeCCCCC--cceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCC----CcEEEEcCEeCCCCCHHH
Q 000475 1219 KIELENLLVQYNPTLP--MVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS----GGRILIDGVDISMIGLQD 1292 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~--~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~----~G~I~IDG~dI~~i~l~~ 1292 (1470)
-++++|+++.|..... .+++||||++.+||.+||||.|||||||+.++|.|+.++. +|+|.+||.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999965432 5999999999999999999999999999999999999987 899999999999999876
Q ss_pred Hh----cccEEEccCCC-CCcc--cHHHhcCc----CC----CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCC
Q 000475 1293 LR----SRLSIIPQDPM-LFQG--TVRTNLDP----LE----QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENW 1357 (1470)
Q Consensus 1293 LR----~~isiIpQdp~-LF~g--TIR~NLdp----~~----~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nL 1357 (1470)
.| ++|++|||||. .++- ||.+-+.- .. +...++..+.|+.+++.+-... ..-...|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 54 57999999995 4443 55555431 11 1134457778888887554332 2234679
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000475 1358 SVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLE 1434 (1470)
Q Consensus 1358 SgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE 1434 (1470)
|||||||+.||+||..+|++||+||||.+||+.|.++|.+.|++.. .+.++|+|||++..+.. ||||+||.+|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999865 68999999999999987 99999999999999
Q ss_pred ecChhHHhhcCCChHHHHHHHH
Q 000475 1435 YDSPRQLLEDNSSSFSKLVAEF 1456 (1470)
Q Consensus 1435 ~g~p~~Ll~~~~s~f~~lv~~~ 1456 (1470)
.|+++++++++...|.+..-+.
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll~a 257 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLLAA 257 (539)
T ss_pred ecCHHHHHhccCCcccHHHHhh
Confidence 9999999999988886655433
No 357
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=3.5e-35 Score=329.08 Aligned_cols=204 Identities=33% Similarity=0.511 Sum_probs=178.2
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|+++.|+.. ..+.+++ ||++++|++++|+||||||||||+++|+|+.+|++|++ .++|
T Consensus 2 ~l~~~~l~~~~~~~------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i-~~~g~~~~~~~~~ 74 (220)
T cd03245 2 RIEFRNVSFSYPNQ------EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSV-LLDGTDIRQLDPA 74 (220)
T ss_pred eEEEEEEEEEcCCC------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeE-EECCEEhHHCCHH
Confidence 37899999999642 2457889 99999999999999999999999999999999999986 6766
Q ss_pred ----EeEEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHH
Q 000475 660 ----KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARA 734 (1470)
Q Consensus 660 ----~~ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARA 734 (1470)
.++|++|+++++..|++||+.++.. ..+++..+.++.+++.+.++..|.|..|.+.+...+||||||||++||||
T Consensus 75 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~a 154 (220)
T cd03245 75 DLRRNIGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARA 154 (220)
T ss_pred HHHhhEEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHH
Confidence 3799999999888899999988754 34456677888888988888999999898888899999999999999999
Q ss_pred HccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEec
Q 000475 735 VYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 735 l~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g 801 (1470)
+..+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++++..||+|++|++|++++.|
T Consensus 155 l~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 155 LLNDPPILLLDEPTSAMDMNSEERLKE-RLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred HhcCCCEEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999887765 455554558999999999988779999999999997653
No 358
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.1e-35 Score=352.14 Aligned_cols=192 Identities=29% Similarity=0.377 Sum_probs=159.5
Q ss_pred cccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC-----------------EeEEEcCCCCCCC
Q 000475 611 TIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-----------------KKAYVPQSSWIQT 672 (1470)
Q Consensus 611 ~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-----------------~~ayv~Q~~~i~~ 672 (1470)
...+++ ||++++||+++|+|+||||||||+++|+|+++|++|++ .++| .++||+|++++++
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I-~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQI-FIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEE-EECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 456888 99999999999999999999999999999999999986 6655 4799999999986
Q ss_pred -ccHHHHHhcCCCC---C-HHHHH---HHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHccCCCEEEE
Q 000475 673 -GTIRENILFGKDM---R-QSFYE---EVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIF 744 (1470)
Q Consensus 673 -~Ti~eNI~~g~~~---~-~~~y~---~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lL 744 (1470)
.||+|||.|+.++ + +++.+ ++++..+|+. ..++.+.+|||||||||+|||||+.+|+|+||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~-----------~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEE-----------YEHRYPDELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCch-----------hhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 6999999987543 1 22233 3344444432 24567789999999999999999999999999
Q ss_pred eCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhhHHhhchhHH
Q 000475 745 DDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYEDLIADQNSEL 814 (1470)
Q Consensus 745 Dep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 814 (1470)
||||||||+.++.++++.+..... .++|+|+|||+++++. .||+|++|++|++++.|+++++......++
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 999999999999999876654333 3899999999999865 499999999999999999999886443333
No 359
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.4e-35 Score=334.09 Aligned_cols=190 Identities=27% Similarity=0.379 Sum_probs=163.2
Q ss_pred eeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCc-ccHHHhc
Q 000475 1237 LKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQ-GTVRTNL 1315 (1470)
Q Consensus 1237 Lk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~-gTIR~NL 1315 (1470)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+++||+|.+|. .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 579999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CcC-----CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCC
Q 000475 1316 DPL-----EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATAS 1386 (1470)
Q Consensus 1316 dp~-----~~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTss 1386 (1470)
... ...++ +++.++++.+++.+... .. ...||||||||++|||||+++|++|||||||++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 144 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRAIVEEHIALVGLTEAAD-------KR----PGQLSGGMKQRVAIARALSIRPKVLLLDEPFGA 144 (230)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHc-------CC----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 532 22332 23667788887765432 22 346999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1387 IDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1387 lD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++.+++
T Consensus 145 LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 145 LDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 99999999999998764 37899999999999876 9999999999999999887663
No 360
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-36 Score=323.29 Aligned_cols=213 Identities=23% Similarity=0.400 Sum_probs=185.8
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH-HhcccE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRLS 1298 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~is 1298 (1470)
.+.+|++.+|.. -.+++||||++++||.+||+|||||||||+++++.|+|+|++|+|.++|.||..++.+. -|..|+
T Consensus 5 L~v~~l~k~FGG--l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 5 LEVRGLSKRFGG--LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeccceeecCC--EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 578999999964 35999999999999999999999999999999999999999999999999999999988 477788
Q ss_pred EEccCCCCCcc-cHHHhcCcCCC-------------C--C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCC
Q 000475 1299 IIPQDPMLFQG-TVRTNLDPLEQ-------------H--S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWS 1358 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp~~~-------------~--s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS 1358 (1470)
--.|.+-+|++ |+-||+.-... + . .++-.+.|+.++|.+.. .+...+||
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a-----------~~~A~~Ls 151 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELA-----------DRPAGNLS 151 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhh-----------cchhhcCC
Confidence 89999999988 99999853210 1 1 23345566666665543 33345799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000475 1359 VGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEY 1435 (1470)
Q Consensus 1359 gGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~ 1435 (1470)
+||+.||-|||||..+|++|+||||.|+|.+.-...+.+.|++..+ +.||++|-||++.+++ ||||+||+.|+++..
T Consensus 152 yG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAe 231 (250)
T COG0411 152 YGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAE 231 (250)
T ss_pred hhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCccc
Confidence 9999999999999999999999999999999999999999998764 4899999999999998 999999999999999
Q ss_pred cChhHHhhcC
Q 000475 1436 DSPRQLLEDN 1445 (1470)
Q Consensus 1436 g~p~~Ll~~~ 1445 (1470)
|+|++..+|+
T Consensus 232 G~P~eV~~dp 241 (250)
T COG0411 232 GTPEEVRNNP 241 (250)
T ss_pred CCHHHHhcCH
Confidence 9999999876
No 361
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.6e-35 Score=335.06 Aligned_cols=191 Identities=27% Similarity=0.405 Sum_probs=160.4
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEc-cCCCCC-cccH
Q 000475 1234 PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIP-QDPMLF-QGTV 1311 (1470)
Q Consensus 1234 ~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIp-Qdp~LF-~gTI 1311 (1470)
.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ....|++++|+| |++.+| ..|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 4699999999999999999999999999999999999999999999999987653 346788999997 667776 4599
Q ss_pred HHhcCcC---CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccC
Q 000475 1312 RTNLDPL---EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEAT 1384 (1470)
Q Consensus 1312 R~NLdp~---~~~sd~----eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaT 1384 (1470)
++|+... ...+++ .+.++++..++.+. +|+.+ ..||+|||||++|||||+++|++|+|||||
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-------~~~~~----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEEL-------LDTPV----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhH-------hcCCh----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 9998532 122332 34455666666433 34444 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1385 ASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1385 sslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
++||+++.+.+.+.|++.. .++|||+++|+++.+.. ||+|++|++|++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999999999999864 37899999999999866 9999999999998765
No 362
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=3.1e-35 Score=324.52 Aligned_cols=194 Identities=26% Similarity=0.393 Sum_probs=168.7
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ..+|+++++
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 478999999964 35899999999999999999999999999999999999999999999999987643 568899999
Q ss_pred EccCCCCC-cccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000475 1300 IPQDPMLF-QGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRI 1377 (1470)
Q Consensus 1300 IpQdp~LF-~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1377 (1470)
+||++.++ ..|+++|+... ....++++.++++..++.++. +..+ .+||||||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrl~laral~~~p~l 146 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFE-------DRPV----AQLSAGQQRRVALARLLLSGRPL 146 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhhh-------cCch----hhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999876 57999999653 234677888999999987543 2232 46999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh-hcCEEEEE
Q 000475 1378 LVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI-DNDLVLVL 1427 (1470)
Q Consensus 1378 LlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~-~~DrIlvL 1427 (1470)
|+|||||++||+.+.+.+.+.|++.. +++|+|++||+...+. .||+++++
T Consensus 147 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 147 WILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999999999999998753 4799999999877664 59999887
No 363
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.7e-34 Score=372.90 Aligned_cols=216 Identities=23% Similarity=0.323 Sum_probs=147.2
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHh------cCCC----C-----------CCcE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALF------RVVE----P-----------SGGR 1277 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~------rl~~----p-----------~~G~ 1277 (1470)
.++++|++. ..|+|+|++|++||.+||+|++|||||||++-.+ ++.+ | -.--
T Consensus 612 ~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (924)
T TIGR00630 612 FLTLKGARE-------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKV 684 (924)
T ss_pred eEEEEeCcc-------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCce
Confidence 488888862 2599999999999999999999999999998333 1111 1 1123
Q ss_pred EEEcCEeCCC---------CC-HHHHhcccEEEccC------CCCCcc--------------cHHHhc--Cc--------
Q 000475 1278 ILIDGVDISM---------IG-LQDLRSRLSIIPQD------PMLFQG--------------TVRTNL--DP-------- 1317 (1470)
Q Consensus 1278 I~IDG~dI~~---------i~-l~~LR~~isiIpQd------p~LF~g--------------TIR~NL--dp-------- 1317 (1470)
|.||-.+|.. .+ .+.+|.-++=.|+- +-.|+- .+.-++ +|
T Consensus 685 v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 764 (924)
T TIGR00630 685 IHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEV 764 (924)
T ss_pred EEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCC
Confidence 5666655543 12 23466666665542 333431 111111 10
Q ss_pred --CCCCCHHH---------HHHHHHHc--CcHHHHHhcc-----------cccCc-cccCCCCCCChhHHHHHHHHHHHc
Q 000475 1318 --LEQHSDQE---------IWEVINKC--HLAEIVRQDQ-----------RLLDA-PVAEDGENWSVGQRQLVCLARVLL 1372 (1470)
Q Consensus 1318 --~~~~sd~e---------I~~aL~~~--~L~~~v~~lp-----------~gLdt-~v~e~G~nLSgGQrQrl~LARALL 1372 (1470)
...+.++- |-++|+.. ...+|+..++ -||+. ..+.....||||||||++|||+|+
T Consensus 765 C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~ 844 (924)
T TIGR00630 765 CKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELS 844 (924)
T ss_pred cCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHh
Confidence 01111110 11111110 0111222211 14544 356677889999999999999999
Q ss_pred c---CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEEEE------eCCEEEEecChhHH
Q 000475 1373 K---KKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVLVL------DEGKVLEYDSPRQL 1441 (1470)
Q Consensus 1373 r---~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~~DrIlvL------~~G~vvE~g~p~~L 1441 (1470)
+ +|+++||||||++||+.+...+++.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+++
T Consensus 845 ~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 845 KRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIKTADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 7 489999999999999999999999998864 578999999999999889999999 79999999999886
No 364
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=2.6e-35 Score=336.28 Aligned_cols=210 Identities=20% Similarity=0.277 Sum_probs=168.2
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCC--CCCCcEEEEcCEeCCCCCHHHHh-cc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV--EPSGGRILIDGVDISMIGLQDLR-SR 1296 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~--~p~~G~I~IDG~dI~~i~l~~LR-~~ 1296 (1470)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999964 35999999999999999999999999999999999995 69999999999999887776654 57
Q ss_pred cEEEccCCCCCcc-cHHHhcC-------cCCC---CC----HHHHHHHHHHcCcHHHHHhccccc-CccccCCCCCCChh
Q 000475 1297 LSIIPQDPMLFQG-TVRTNLD-------PLEQ---HS----DQEIWEVINKCHLAEIVRQDQRLL-DAPVAEDGENWSVG 1360 (1470)
Q Consensus 1297 isiIpQdp~LF~g-TIR~NLd-------p~~~---~s----d~eI~~aL~~~~L~~~v~~lp~gL-dt~v~e~G~nLSgG 1360 (1470)
++++||+|.++.. |..+++. .... .. ++.+.+.++..++ |+++ +..+ ..+||||
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~---~~~LS~G 149 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKM-------PEDLLTRSV---NVGFSGG 149 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCC-------ChhhcccCC---CCCCCHH
Confidence 9999999987764 4444432 1110 01 1112223333322 2222 2222 1369999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-CcEEEEEecChhhhhh--cCEEEEEeCCEEEEecC
Q 000475 1361 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS-RCTVITVAHRIPTVID--NDLVLVLDEGKVLEYDS 1437 (1470)
Q Consensus 1361 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~-~~TVI~IAHRl~ti~~--~DrIlvL~~G~vvE~g~ 1437 (1470)
||||++||||++++|+||+|||||++||.++.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+
T Consensus 150 ~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~ 229 (248)
T PRK09580 150 EKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGD 229 (248)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCC
Confidence 99999999999999999999999999999999999999987643 6899999999999987 89999999999999999
Q ss_pred hhHH
Q 000475 1438 PRQL 1441 (1470)
Q Consensus 1438 p~~L 1441 (1470)
++..
T Consensus 230 ~~~~ 233 (248)
T PRK09580 230 FTLV 233 (248)
T ss_pred HHHH
Confidence 8754
No 365
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7e-36 Score=299.35 Aligned_cols=198 Identities=26% Similarity=0.429 Sum_probs=175.0
Q ss_pred EeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCCC
Q 000475 1228 QYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLF 1307 (1470)
Q Consensus 1228 ~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF 1307 (1470)
+|.....++|+++||++++||.++|.||||||||||++.+.-+..|++|+++..|.|+++++++.+|++++|+-|.|.||
T Consensus 10 ~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLf 89 (223)
T COG4619 10 GYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALF 89 (223)
T ss_pred HhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCcccc
Confidence 56555567999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHhcC-cC---C-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000475 1308 QGTVRTNLD-PL---E-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDE 1382 (1470)
Q Consensus 1308 ~gTIR~NLd-p~---~-~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDE 1382 (1470)
.+||.+||- |. + ..+...-.+-|+++++.+.+ |+. +..+||||||||++|+|-|---|+||+|||
T Consensus 90 g~tVeDNlifP~~~r~rr~dr~aa~~llar~~l~~~~------L~k----~it~lSGGE~QriAliR~Lq~~P~ILLLDE 159 (223)
T COG4619 90 GDTVEDNLIFPWQIRNRRPDRAAALDLLARFALPDSI------LTK----NITELSGGEKQRIALIRNLQFMPKILLLDE 159 (223)
T ss_pred ccchhhccccchHHhccCCChHHHHHHHHHcCCchhh------hcc----hhhhccchHHHHHHHHHHhhcCCceEEecC
Confidence 999999985 43 2 23444556677777776654 333 345799999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhh-hhhcCEEEEEeCCEEEEe
Q 000475 1383 ATASIDTATDNVIQQTIREET--SRCTVITVAHRIPT-VIDNDLVLVLDEGKVLEY 1435 (1470)
Q Consensus 1383 aTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~t-i~~~DrIlvL~~G~vvE~ 1435 (1470)
+||+||+.+.+.|.+.|..++ ++..|+.|||+.+. +..+||++.+-.|++-|.
T Consensus 160 ~TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~~ 215 (223)
T COG4619 160 ITSALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGEM 215 (223)
T ss_pred chhhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCccccc
Confidence 999999999999999999887 57899999999998 778999999999986543
No 366
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=4.5e-35 Score=367.23 Aligned_cols=212 Identities=26% Similarity=0.401 Sum_probs=184.3
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHh-ccc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLR-SRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR-~~i 1297 (1470)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+..+.+ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999964 3599999999999999999999999999999999999999999999999999888777655 579
Q ss_pred EEEccCCCCCcc-cHHHhcCcCCC-C--CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHcc
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPLEQ-H--SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1373 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~~~-~--sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1373 (1470)
+|+||++.+|.+ |+++|+..... . .++++.++++..++.+. ++..+ .+||||||||++|||||++
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LSgG~~qrv~la~aL~~ 157 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLD-------LDSSA----GSLEVADRQIVEILRGLMR 157 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCcc-------ccCCh----hhCCHHHHHHHHHHHHHHc
Confidence 999999988876 99999974321 1 23456677777776432 23333 4699999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1374 KKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1374 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
+|+||+|||||++||+.+...+.+.|++.. +++|||+++|+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 158 DSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 999999999999999999999999998753 47899999999999876 99999999999999999998865
No 367
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-35 Score=343.12 Aligned_cols=206 Identities=27% Similarity=0.432 Sum_probs=167.4
Q ss_pred CccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC-------
Q 000475 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------- 659 (1470)
Q Consensus 588 ~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------- 659 (1470)
+..++++|++|+|+.... ...+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 19 ~~~l~~~nl~~~y~~~~~---~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I-~i~g~~~~~~~ 94 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQE---NELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTI-QVGDIYIGDKK 94 (320)
T ss_pred CceEEEEeEEEEeCCCCc---ccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeE-EECCEEccccc
Confidence 356999999999974310 12358999 99999999999999999999999999999999999986 5543
Q ss_pred ----------------------EeEEEcCCC--CCCCccHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHHhccC
Q 000475 660 ----------------------KKAYVPQSS--WIQTGTIRENILFGKD---MRQS----FYEEVLEGCALNQDIEMWAD 708 (1470)
Q Consensus 660 ----------------------~~ayv~Q~~--~i~~~Ti~eNI~~g~~---~~~~----~y~~v~~~~~l~~d~~~l~~ 708 (1470)
.++||+|+| .+++.||+|||.|+.. .+.+ +.++.++.+++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------- 167 (320)
T PRK13631 95 NNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD------- 167 (320)
T ss_pred ccccccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh-------
Confidence 269999998 6888999999999742 1222 2222333333321
Q ss_pred CCcccccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhh-hc
Q 000475 709 GDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLD-AA 786 (1470)
Q Consensus 709 g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~-~~ 786 (1470)
...++.+.+||||||||++|||||..+|+++||||||++||+.+...+++. +..+ .+++|+|+|||+++++. .|
T Consensus 168 ---~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~-L~~l~~~g~TiiivtHd~~~~~~~a 243 (320)
T PRK13631 168 ---SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQL-ILDAKANNKTVFVITHTMEHVLEVA 243 (320)
T ss_pred ---hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhC
Confidence 234677889999999999999999999999999999999999998888764 4433 35899999999999875 59
Q ss_pred CEEEEEeCCEEEEecChhhHHh
Q 000475 787 DLVLVMKDGKIEQSGKYEDLIA 808 (1470)
Q Consensus 787 d~i~~l~~G~i~~~g~~~~l~~ 808 (1470)
|+|++|++|++++.|+++++..
T Consensus 244 dri~vl~~G~i~~~g~~~~~~~ 265 (320)
T PRK13631 244 DEVIVMDKGKILKTGTPYEIFT 265 (320)
T ss_pred CEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999998875
No 368
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=346.91 Aligned_cols=203 Identities=28% Similarity=0.375 Sum_probs=167.9
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|.. ...+++ ||++++||+++|+||||||||||+++|+|+.+|++|++ .++|
T Consensus 6 ~l~~~~l~~~~~~--------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I-~~~g~~i~~~~~~ 76 (351)
T PRK11432 6 FVVLKNITKRFGS--------NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQI-FIDGEDVTHRSIQ 76 (351)
T ss_pred EEEEEeEEEEECC--------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEE-EECCEECCCCCHH
Confidence 5899999999963 246888 99999999999999999999999999999999999986 7766
Q ss_pred --EeEEEcCCCCCCC-ccHHHHHhcCCCC---CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHH
Q 000475 660 --KKAYVPQSSWIQT-GTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1470)
Q Consensus 660 --~~ayv~Q~~~i~~-~Ti~eNI~~g~~~---~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 729 (1470)
.++||+|++.++. .||+|||.|+... ++ ++.+++++..++.. ..+....+|||||||||
T Consensus 77 ~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~-----------~~~r~~~~LSgGq~QRV 145 (351)
T PRK11432 77 QRDICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAG-----------FEDRYVDQISGGQQQRV 145 (351)
T ss_pred HCCEEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHHHHHHH
Confidence 3699999998875 6999999998532 21 23333444444432 22456789999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcC--CcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhhH
Q 000475 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLS--QKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYEDL 806 (1470)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~--~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 806 (1470)
+|||||+.+|+++|||||||+||+.+...+.+. ++.+.+ ++|+|+||||.+++. .||+|++|++|+|.+.|+++++
T Consensus 146 aLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~-l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~ 224 (351)
T PRK11432 146 ALARALILKPKVLLFDEPLSNLDANLRRSMREK-IRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQEL 224 (351)
T ss_pred HHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999999999999999999998888664 444433 799999999999875 5999999999999999999998
Q ss_pred HhhchhH
Q 000475 807 IADQNSE 813 (1470)
Q Consensus 807 ~~~~~~~ 813 (1470)
..++...
T Consensus 225 ~~~p~~~ 231 (351)
T PRK11432 225 YRQPASR 231 (351)
T ss_pred HhCCCch
Confidence 7644433
No 369
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=5.8e-35 Score=311.12 Aligned_cols=159 Identities=32% Similarity=0.553 Sum_probs=148.1
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHH-HHhcccE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ-DLRSRLS 1298 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~-~LR~~is 1298 (1470)
|+++|++++|+.. ++++|+||++++||.++|+|++|||||||+++|.|+++|++|+|.+||.++...+.. ..|++++
T Consensus 1 l~~~~l~~~~~~~--~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGGV--KALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECCe--EEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 5789999999643 599999999999999999999999999999999999999999999999999988764 4678899
Q ss_pred EEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 000475 1299 IIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRIL 1378 (1470)
Q Consensus 1299 iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1378 (1470)
++|| ||+|||||++||||++++|++|
T Consensus 79 ~~~q------------------------------------------------------LS~G~~qrl~laral~~~p~il 104 (163)
T cd03216 79 MVYQ------------------------------------------------------LSVGERQMVEIARALARNARLL 104 (163)
T ss_pred EEEe------------------------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 9999 9999999999999999999999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000475 1379 VLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLE 1434 (1470)
Q Consensus 1379 lLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE 1434 (1470)
+|||||++||.++.+.+.+.|++.. ++.|+|+++|+++.+.. ||++++|++|++++
T Consensus 105 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 105 ILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999998764 47899999999998865 99999999999975
No 370
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-35 Score=313.82 Aligned_cols=204 Identities=26% Similarity=0.412 Sum_probs=170.1
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE--------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------- 660 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------- 660 (1470)
.++++|.++.|+... .....+++ ||++.+||.++|+|++|||||||.++|+|..+|++|++ .++|+
T Consensus 3 ~l~v~nl~~~y~~~~----~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I-~~~G~~~~~~~~~ 77 (252)
T COG1124 3 LLSVRNLSIVYGGGK----FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSI-LLDGKPLAPKKRA 77 (252)
T ss_pred eEEEeceEEEecCCc----chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceE-EECCcccCccccc
Confidence 578999999998652 12257888 99999999999999999999999999999999999997 78773
Q ss_pred ------eEEEcCCCCC---CCccHHHHHhcCCC-----CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHH
Q 000475 661 ------KAYVPQSSWI---QTGTIRENILFGKD-----MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1470)
Q Consensus 661 ------~ayv~Q~~~i---~~~Ti~eNI~~g~~-----~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 726 (1470)
+-+|+|+|.- +..||++-|.-+.. ..+++..++++..+|.+.. ...+...|||||+
T Consensus 78 ~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~----------l~R~P~eLSGGQ~ 147 (252)
T COG1124 78 KAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSF----------LDRRPHELSGGQR 147 (252)
T ss_pred hhhccceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHH----------HhcCchhcChhHH
Confidence 5899999873 45699888765432 2234456677777776543 2356778999999
Q ss_pred HHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecCh
Q 000475 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKY 803 (1470)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 803 (1470)
|||||||||..+|+++|||||||+||+.+...|++- +..+. .+-|.|+||||+..+.+ ||||+||++|++++.++.
T Consensus 148 QRiaIARAL~~~PklLIlDEptSaLD~siQa~Ilnl-L~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~ 226 (252)
T COG1124 148 QRIAIARALIPEPKLLILDEPTSALDVSVQAQILNL-LLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPT 226 (252)
T ss_pred HHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHH-HHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeech
Confidence 999999999999999999999999999999999864 44333 36699999999999987 999999999999999999
Q ss_pred hhHHhh
Q 000475 804 EDLIAD 809 (1470)
Q Consensus 804 ~~l~~~ 809 (1470)
+++...
T Consensus 227 ~~l~~~ 232 (252)
T COG1124 227 EELLSH 232 (252)
T ss_pred hhhhcC
Confidence 998763
No 371
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.5e-34 Score=382.94 Aligned_cols=207 Identities=27% Similarity=0.282 Sum_probs=147.6
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHH---------HHhcCCCCCC----c----EEEEc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQ---------ALFRVVEPSG----G----RILID 1281 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~---------~L~rl~~p~~----G----~I~ID 1281 (1470)
.++++|++. ..|+|+|++|++||.+||+|++|||||||++ .|.|...+.. + -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 578888752 2699999999999999999999999999999 4445332211 1 24555
Q ss_pred CEeCCCCCH----------HHHhc---------ccE-----EEccC------------------C---------------
Q 000475 1282 GVDISMIGL----------QDLRS---------RLS-----IIPQD------------------P--------------- 1304 (1470)
Q Consensus 1282 G~dI~~i~l----------~~LR~---------~is-----iIpQd------------------p--------------- 1304 (1470)
-.+|..-+. +++|+ +.+ +..|. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 554443211 24551 111 11221 1
Q ss_pred -----CCCcc-cHHHhcCcCCC------CCHHHHHHH---HHHcCcHHHHHhcccccCcc-ccCCCCCCChhHHHHHHHH
Q 000475 1305 -----MLFQG-TVRTNLDPLEQ------HSDQEIWEV---INKCHLAEIVRQDQRLLDAP-VAEDGENWSVGQRQLVCLA 1368 (1470)
Q Consensus 1305 -----~LF~g-TIR~NLdp~~~------~sd~eI~~a---L~~~~L~~~v~~lp~gLdt~-v~e~G~nLSgGQrQrl~LA 1368 (1470)
+.+.+ ||.|||+.... .+.+++.+. |+.+ ||+.. .+....+||||||||++||
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l~~L~~v-----------GL~~l~l~q~~~tLSGGE~QRV~LA 821 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIHALCSL-----------GLDYLPLGRPLSSLSGGEIQRLKLA 821 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHHHHHHHc-----------CCcchhhcCccccCCHHHHHHHHHH
Confidence 13334 77777754211 012223322 2222 34432 4555678999999999999
Q ss_pred HHHc---cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEEEEe------CCEEEEecCh
Q 000475 1369 RVLL---KKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVLVLD------EGKVLEYDSP 1438 (1470)
Q Consensus 1369 RALL---r~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~~DrIlvL~------~G~vvE~g~p 1438 (1470)
|||+ ++|+++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|+ +|++++.|+|
T Consensus 822 raL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 822 YELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred HHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 9998 5999999999999999999999999998764 5789999999999997799999996 7999999999
Q ss_pred hHHhh
Q 000475 1439 RQLLE 1443 (1470)
Q Consensus 1439 ~~Ll~ 1443 (1470)
+++.+
T Consensus 902 eel~~ 906 (1809)
T PRK00635 902 EELIH 906 (1809)
T ss_pred HHHHh
Confidence 99986
No 372
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=368.57 Aligned_cols=212 Identities=25% Similarity=0.387 Sum_probs=180.7
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEEcCEeCCCCCHHH-Hhc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP--SGGRILIDGVDISMIGLQD-LRS 1295 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p--~~G~I~IDG~dI~~i~l~~-LR~ 1295 (1470)
-|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+..+ .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 4899999999963 3599999999999999999999999999999999999996 8999999999998877655 467
Q ss_pred ccEEEccCCCCCcc-cHHHhcCcCC------CCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1296 RLSIIPQDPMLFQG-TVRTNLDPLE------QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1296 ~isiIpQdp~LF~g-TIR~NLdp~~------~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
+++|+||+|.+|.. |+++|+.... ..+. +++.++++..++.+ -+|..+ .+||||||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~----~~LSgGqkqr 151 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDI-------NPATPV----GNLGLGQQQL 151 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCC-------Ccccch----hhCCHHHHHH
Confidence 89999999988875 9999997421 1121 34556666665532 223333 5699999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
++|||||+++|+||+||||||+||+++...+.+.|++.. ++.|||+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 231 (506)
T PRK13549 152 VEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMT 231 (506)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCC
Confidence 999999999999999999999999999999999998753 47899999999999876 9999999999999999988764
Q ss_pred h
Q 000475 1443 E 1443 (1470)
Q Consensus 1443 ~ 1443 (1470)
.
T Consensus 232 ~ 232 (506)
T PRK13549 232 E 232 (506)
T ss_pred H
Confidence 3
No 373
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-32 Score=304.16 Aligned_cols=503 Identities=16% Similarity=0.169 Sum_probs=326.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000475 266 PQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHS-SYH-YGLVLASVFLFAKTVESLTQRQWYFGAN 343 (1470)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~-~~~-~g~~l~~~l~~~~~~~~l~~~~~~~~~~ 343 (1470)
.-.++|.+++.++....+.+.. ..++-.++-.+-+++-...... ..- .-..+...++++..+.. .--.+..+
T Consensus 4 ll~llr~nr~~~i~~~a~s~a~---g~~g~~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~is~---lg~t~~gq 77 (546)
T COG4615 4 LLLLLRQNRWPFISVMALSLAS---GALGIGLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLISQ---LGLTTLGQ 77 (546)
T ss_pred HHHHhcccccHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 3467778887777655444433 3334444544444443322200 110 01122222333333322 22223344
Q ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 000475 344 RIGIRVRSALTVLIYKRSMAIKFAGPSSGIIINMINVDVERIGDFFLYIHRIWLLPVQVFLALVILYKNLGAAPAFAALF 423 (1470)
Q Consensus 344 r~g~rir~~L~~~iy~K~L~ls~~~~~~G~ivnlms~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~~l~~l~ 423 (1470)
....++|.-++..|...-+. .....+++.++.-++.|+..|.-.+..+.++-.+.+-+..++..|++.=+ ...+..++
T Consensus 78 ~~I~klr~~~~~kil~tple-rier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp-~mf~l~vV 155 (546)
T COG4615 78 HFIYKLRSEFIKKILDTPLE-RIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSP-KMFLLTVV 155 (546)
T ss_pred HHHHHHHHHHHHHHhcCHHH-HHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHH
Confidence 44456666665554432221 01112788899999999999997777788777666666666666665544 77777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHH--HHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 000475 424 STIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQ--EFLKKLL-RLREIERDSLKKYLYTCSA 500 (1470)
Q Consensus 424 ~~~i~~~~~~~~~~~~~~~~~~~~~~~D~R~~~~~E~L~~ik~IK~~~wE~--~f~~~i~-~~R~~E~~~l~~~~~~~~~ 500 (1470)
.+++.+..+.....+..++..+..+..|+-.+..+.++.|-|.+|+..=.. .+.+.+. ..++.+-+.. +...+
T Consensus 156 ~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~~r~~~~----~~n~f 231 (546)
T COG4615 156 WIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQEYRHHII----RANTF 231 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHHHHhhhh----hhhHH
Confidence 788888888888888888888888999999999999999999999876322 1222221 1122221111 11111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 000475 501 -IAFLFWASPTLVSVITFGVCILLKTPLT-SGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKP 578 (1470)
Q Consensus 501 -~~~~~~~~p~~v~~~~f~~~~~~~~~L~-~~~vft~l~~~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~ 578 (1470)
+....|....+.+++....|+...-... ...+.|...++-.++.|+.+.-..++.+.+|.++++||.++=..|+..+.
T Consensus 232 ~~la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~ 311 (546)
T COG4615 232 HLLAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADF 311 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccC
Confidence 1223344444444333332332222222 22444555556668999999999999999999999999998776553332
Q ss_pred CCCCCCCCCCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEE
Q 000475 579 ITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKV 657 (1470)
Q Consensus 579 ~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~ 657 (1470)
....+.+ +-..++++|+.|+|+++ .+.+.. |++|++||++-|+|.||||||||++.++|.++|++|++ .+
T Consensus 312 ~~~q~~p-~~~~lelrnvrfay~~~-------~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I-~l 382 (546)
T COG4615 312 PRPQAFP-DWKTLELRNVRFAYQDN-------AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEI-LL 382 (546)
T ss_pred CCCCcCC-cccceeeeeeeeccCcc-------cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCce-eE
Confidence 2222222 23569999999999865 366666 99999999999999999999999999999999999996 88
Q ss_pred CCEe-------------EEEcCCCCCCCccHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCch
Q 000475 658 HGKK-------------AYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1470)
Q Consensus 658 ~g~~-------------ayv~Q~~~i~~~Ti~eNI~~g~~-~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 723 (1470)
+|+- +-|+-+-|+|+.+ +-++. -.++..+.-++.-.+.+.. .+.+|..+ ...||-
T Consensus 383 dg~pV~~e~ledYR~LfSavFsDyhLF~~l-----l~~e~~as~q~i~~~LqrLel~~kt-sl~d~~fs-----~~kLSt 451 (546)
T COG4615 383 DGKPVSAEQLEDYRKLFSAVFSDYHLFDQL-----LGPEGKASPQLIEKWLQRLELAHKT-SLNDGRFS-----NLKLST 451 (546)
T ss_pred CCccCCCCCHHHHHHHHHHHhhhHhhhHhh-----hCCccCCChHHHHHHHHHHHHhhhh-cccCCccc-----cccccc
Confidence 8852 2233344444322 11221 2334444444444443322 22333322 246999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCEEEEe
Q 000475 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDAADLVLVMKDGKIEQS 800 (1470)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~ 800 (1470)
|||.|+++--|+..+.|||+|||=-+-=||+-++..++..+-.+. .||||+.||||-.+...|||++.|++|++++.
T Consensus 452 GQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 452 GQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred chHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 999999999999999999999999999999998888777664433 49999999999999999999999999999864
No 374
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-35 Score=330.89 Aligned_cols=197 Identities=29% Similarity=0.393 Sum_probs=161.0
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+. .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i-~~~g~~~~~~~~~~ 71 (235)
T cd03261 1 IELRGLTKSFGG--------RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEV-LIDGEDISGLSEAE 71 (235)
T ss_pred CeEEEEEEEECC--------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEEccccChhh
Confidence 467899999963 357889 99999999999999999999999999999999999986 5654
Q ss_pred ------EeEEEcCCCCCCC-ccHHHHHhcCCC----CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchH
Q 000475 660 ------KKAYVPQSSWIQT-GTIRENILFGKD----MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1470)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~eNI~~g~~----~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 724 (1470)
.++|++|++.++. .|++||+.++.. .+. ++..++++.+++.+ .......+||||
T Consensus 72 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG 140 (235)
T cd03261 72 LYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRG-----------AEDLYPAELSGG 140 (235)
T ss_pred HHHHhcceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHH
Confidence 2699999988776 599999988632 122 12333444444432 123556789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000475 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 801 (1470)
|||||+||||+..+|+++||||||++||+.+...+.+. ++.+. .++|||+|||+++++.. ||+|++|++|++++.|
T Consensus 141 ~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g 219 (235)
T cd03261 141 MKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDL-IRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEG 219 (235)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEec
Confidence 99999999999999999999999999999998887764 44443 37899999999998865 9999999999999999
Q ss_pred ChhhHHh
Q 000475 802 KYEDLIA 808 (1470)
Q Consensus 802 ~~~~l~~ 808 (1470)
+++++..
T Consensus 220 ~~~~~~~ 226 (235)
T cd03261 220 TPEELRA 226 (235)
T ss_pred CHHHHcC
Confidence 9888764
No 375
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-35 Score=369.31 Aligned_cols=212 Identities=20% Similarity=0.300 Sum_probs=181.5
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH-Hhccc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i 1297 (1470)
-|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+... .|+++
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 4899999999964 35999999999999999999999999999999999999999999999999998877665 35679
Q ss_pred EEEccCCCCCcc-cHHHhcCcCC-------CC---C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPLE-------QH---S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1362 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~~-------~~---s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQr 1362 (1470)
+|+||++.+|.. |+++|+.... .. + ++++.++++.+++.+ .+|.++ .+||||||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-------~~~~~~----~~LSgG~~ 151 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKV-------DLDEKV----ANLSISHK 151 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCC-------Ccccch----hhCCHHHH
Confidence 999999988876 9999996321 10 1 134556666666532 234444 46999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000475 1363 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1440 (1470)
Q Consensus 1363 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~ 1440 (1470)
||++|||||+++|+||+|||||++||+.+...+.+.|++.. ++.|||+|+|+++.+.+ ||+|++|++|++++.|++++
T Consensus 152 qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (510)
T PRK09700 152 QMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSD 231 (510)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhh
Confidence 99999999999999999999999999999999999998753 47899999999999976 99999999999999999988
Q ss_pred Hhh
Q 000475 1441 LLE 1443 (1470)
Q Consensus 1441 Ll~ 1443 (1470)
+..
T Consensus 232 ~~~ 234 (510)
T PRK09700 232 VSN 234 (510)
T ss_pred CCH
Confidence 754
No 376
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.4e-35 Score=367.06 Aligned_cols=212 Identities=22% Similarity=0.343 Sum_probs=179.9
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHH-Hhccc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i 1297 (1470)
-|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999997766554 46789
Q ss_pred EEEccCCCCCcc-cHHHhcCcCC-------CCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPLE-------QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1365 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~~-------~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl 1365 (1470)
+|+||+|.+|.. |+++|+.... ..+. +++.++++.+++.+ .+|.++ .+||||||||+
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~----~~LSgG~~qrv 150 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRF-------SSDKLV----GELSIGEQQMV 150 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCC-------CccCch----hhCCHHHHHHH
Confidence 999999988865 9999997421 1222 23455666665532 234444 46999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1366 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1366 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
+|||||+.+|++|+|||||++||+.+.+.+.+.|++.. .+.|||+|+|+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (501)
T PRK10762 151 EIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE 230 (501)
T ss_pred HHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH
Confidence 99999999999999999999999999999999998753 47899999999999876 99999999999999999887643
No 377
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=6.8e-35 Score=346.23 Aligned_cols=205 Identities=29% Similarity=0.351 Sum_probs=169.0
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE--------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------- 660 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------- 660 (1470)
.++++|++++|+. ...+++ ||++++|++++|+|||||||||||++|+|..+|++|++ .++|+
T Consensus 4 ~l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I-~i~g~~~~~~~~~ 74 (353)
T TIGR03265 4 YLSIDNIRKRFGA--------FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTI-YQGGRDITRLPPQ 74 (353)
T ss_pred EEEEEEEEEEeCC--------eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEE-EECCEECCCCCHH
Confidence 5899999999963 246888 99999999999999999999999999999999999997 77763
Q ss_pred ---eEEEcCCCCCCC-ccHHHHHhcCCCC---C----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHH
Q 000475 661 ---KAYVPQSSWIQT-GTIRENILFGKDM---R----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1470)
Q Consensus 661 ---~ayv~Q~~~i~~-~Ti~eNI~~g~~~---~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 729 (1470)
++||+|++-+|. .||+|||.|+... + .++.+++++..+|.+ ....++.+|||||||||
T Consensus 75 ~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~-----------~~~~~~~~LSgGq~QRv 143 (353)
T TIGR03265 75 KRDYGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPG-----------SERKYPGQLSGGQQQRV 143 (353)
T ss_pred HCCEEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCc-----------hhhCChhhCCHHHHHHH
Confidence 799999998874 7999999998532 2 223344444444432 23466789999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhhHH
Q 000475 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYEDLI 807 (1470)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 807 (1470)
+|||||+.+|+++|||||||+||+.+..++.+.+.+-.. .+.|+|+||||.+++. .||+|++|++|++++.|+++++.
T Consensus 144 aLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~ 223 (353)
T TIGR03265 144 ALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIY 223 (353)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999998888664433222 2789999999999875 49999999999999999999998
Q ss_pred hhchhHH
Q 000475 808 ADQNSEL 814 (1470)
Q Consensus 808 ~~~~~~~ 814 (1470)
.++...+
T Consensus 224 ~~p~~~~ 230 (353)
T TIGR03265 224 RHPATPF 230 (353)
T ss_pred hCCCCHH
Confidence 7544343
No 378
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.6e-35 Score=323.33 Aligned_cols=194 Identities=24% Similarity=0.376 Sum_probs=168.2
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 689999999964 35999999999999999999999999999999999999999999999999998654 457889999
Q ss_pred EccCCCCCc-ccHHHhcCcCC----CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccC
Q 000475 1300 IPQDPMLFQ-GTVRTNLDPLE----QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKK 1374 (1470)
Q Consensus 1300 IpQdp~LF~-gTIR~NLdp~~----~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~ 1374 (1470)
+||++.++. .|+++|+.... ...++++.++++..++.++.. .. ...||+|||||++||||++++
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-------~~----~~~LS~G~~qrl~la~al~~~ 147 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGFED-------VP----VRQLSAGQQRRVALARLWLTR 147 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHHhh-------CC----hhhcCHHHHHHHHHHHHHhcC
Confidence 999998876 59999996421 134567888999999876542 22 246999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEE
Q 000475 1375 KRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVL 1427 (1470)
Q Consensus 1375 ~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL 1427 (1470)
|++|+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.. .+|++++
T Consensus 148 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 148 APLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999999998763 47899999999999955 5677776
No 379
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-35 Score=374.58 Aligned_cols=223 Identities=25% Similarity=0.358 Sum_probs=182.5
Q ss_pred cEEEEeEEEEeCCC--CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCC----------
Q 000475 1219 KIELENLLVQYNPT--LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDIS---------- 1286 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~--~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~---------- 1286 (1470)
-|+++|++++|+.. ..++|+||||++++||++||||+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 69999999999632 236999999999999999999999999999999999999999999999998652
Q ss_pred CCCHH---HHh-cccEEEccCC--CCCcc-cHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCcccc
Q 000475 1287 MIGLQ---DLR-SRLSIIPQDP--MLFQG-TVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVA 1351 (1470)
Q Consensus 1287 ~i~l~---~LR-~~isiIpQdp--~LF~g-TIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~ 1351 (1470)
+.+.. .+| ++|++|||+| .++.. |+++|+... ...+ ++++.++|+.+++.+.- .-+|..+
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----~~~~~~~- 166 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQ----TILSRYP- 166 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChh----hHHhCCC-
Confidence 22222 344 5799999999 57764 999998631 1122 24566778888773210 1123333
Q ss_pred CCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-C-CcEEEEEecChhhhhh-cCEEEEEe
Q 000475 1352 EDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-S-RCTVITVAHRIPTVID-NDLVLVLD 1428 (1470)
Q Consensus 1352 e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~-~~TVI~IAHRl~ti~~-~DrIlvL~ 1428 (1470)
.+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. + ++|||+|+|+++.+.. ||||++|+
T Consensus 167 ---~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 167 ---HQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred ---ccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 4699999999999999999999999999999999999999999999864 2 7899999999999876 99999999
Q ss_pred CCEEEEecChhHHhhcCCChH
Q 000475 1429 EGKVLEYDSPRQLLEDNSSSF 1449 (1470)
Q Consensus 1429 ~G~vvE~g~p~~Ll~~~~s~f 1449 (1470)
+|++++.|+++++++++...|
T Consensus 244 ~G~i~~~g~~~~~~~~~~~~~ 264 (623)
T PRK10261 244 QGEAVETGSVEQIFHAPQHPY 264 (623)
T ss_pred CCeecccCCHHHhhcCCCChh
Confidence 999999999999987654444
No 380
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1e-34 Score=346.16 Aligned_cols=202 Identities=28% Similarity=0.384 Sum_probs=167.8
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE-------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK------- 660 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~------- 660 (1470)
..++++|++++|.. ...+++ ||++++||+++|+|||||||||||++|+|+.+|++|++ .++|.
T Consensus 13 ~~L~l~~l~~~~~~--------~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I-~~~g~~i~~~~~ 83 (375)
T PRK09452 13 PLVELRGISKSFDG--------KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRI-MLDGQDITHVPA 83 (375)
T ss_pred ceEEEEEEEEEECC--------eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEE-EECCEECCCCCH
Confidence 45899999999963 246888 99999999999999999999999999999999999996 77764
Q ss_pred ----eEEEcCCCCCC-CccHHHHHhcCCCC---CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHH
Q 000475 661 ----KAYVPQSSWIQ-TGTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQR 728 (1470)
Q Consensus 661 ----~ayv~Q~~~i~-~~Ti~eNI~~g~~~---~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 728 (1470)
++||+|++.++ ..||+|||.|+... .. ++.+++++..++...+ ..+..+||||||||
T Consensus 84 ~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~p~~LSgGq~QR 152 (375)
T PRK09452 84 ENRHVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFA-----------QRKPHQLSGGQQQR 152 (375)
T ss_pred HHCCEEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHH
Confidence 79999999887 46999999998532 21 2334445555554333 34567999999999
Q ss_pred HHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhh
Q 000475 729 IQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYED 805 (1470)
Q Consensus 729 v~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 805 (1470)
|+|||||+.+|+++|||||||+||++....+.+. ++.+. .+.|+|+||||.+++. .||+|++|++|+|.+.|++++
T Consensus 153 VaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~ 231 (375)
T PRK09452 153 VAIARAVVNKPKVLLLDESLSALDYKLRKQMQNE-LKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPRE 231 (375)
T ss_pred HHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999998877654 44443 3799999999999865 599999999999999999999
Q ss_pred HHhhch
Q 000475 806 LIADQN 811 (1470)
Q Consensus 806 l~~~~~ 811 (1470)
+..++.
T Consensus 232 i~~~p~ 237 (375)
T PRK09452 232 IYEEPK 237 (375)
T ss_pred HHhCcc
Confidence 876443
No 381
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.2e-34 Score=324.34 Aligned_cols=197 Identities=40% Similarity=0.746 Sum_probs=173.6
Q ss_pred EEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC-----------
Q 000475 592 DIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG----------- 659 (1470)
Q Consensus 592 ~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g----------- 659 (1470)
.+.|+.|+|+.+ .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 2 ~~~~~~~~~~~~-------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i-~~~g~~~~~~~~~~~ 73 (218)
T cd03290 2 QVTNGYFSWGSG-------LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKV-HWSNKNESEPSFEAT 73 (218)
T ss_pred eeeeeEEecCCC-------CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeE-EECCccccccccccc
Confidence 467899999753 457889 99999999999999999999999999999999999986 5533
Q ss_pred ------EeEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHH
Q 000475 660 ------KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLAR 733 (1470)
Q Consensus 660 ------~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LAR 733 (1470)
.++|++|+|.+++.|++||+.++.+.+.++.+++++.+++.+.++..|.|+++.++....+||||||||++|||
T Consensus 74 ~~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~lar 153 (218)
T cd03290 74 RSRNRYSVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVAR 153 (218)
T ss_pred chhhcceEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHH
Confidence 47999999999889999999998766666677888999998888888999999899999999999999999999
Q ss_pred HHccCCCEEEEeCcCCCCCHHHHHHHHHH-HHHhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCE
Q 000475 734 AVYSNSDVYIFDDPFSAVDAHTGTHLFKQ-CLMGLL-SQKTVLYTTHQLEFLDAADLVLVMKDGK 796 (1470)
Q Consensus 734 Al~~~~~i~lLDep~saLD~~~~~~i~~~-~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~ 796 (1470)
|++.+|+++||||||++||+.+...+.+. ++.... .++|+|++||+.+.+..||++++|++|.
T Consensus 154 al~~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 154 ALYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred HHhhCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999999998887763 444433 3789999999999988899999999884
No 382
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=337.27 Aligned_cols=203 Identities=26% Similarity=0.414 Sum_probs=167.1
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
|+++|++|+|+.... ...+.+++ ||++++||+++|+|+||||||||+++|.|.++|++|++ .++|
T Consensus 2 i~~~~v~~~y~~~~~---~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~i~~~~~~~ 77 (288)
T PRK13643 2 IKFEKVNYTYQPNSP---FASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKV-TVGDIVVSSTSKQK 77 (288)
T ss_pred EEEEEEEEEeCCCCc---ccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEE-EECCEECccccccc
Confidence 689999999974310 01357899 99999999999999999999999999999999999986 6665
Q ss_pred -------EeEEEcCCC--CCCCccHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCch
Q 000475 660 -------KKAYVPQSS--WIQTGTIRENILFGKD---MR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1470)
Q Consensus 660 -------~~ayv~Q~~--~i~~~Ti~eNI~~g~~---~~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 723 (1470)
.++||+|+| .++..|+.||+.|+.. .. +++++++++..++.+++ .+....+|||
T Consensus 78 ~~~~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~~~~LSg 147 (288)
T PRK13643 78 EIKPVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF----------WEKSPFELSG 147 (288)
T ss_pred cHHHHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------ccCCcccCCH
Confidence 269999998 6788899999999753 11 12344555555553222 2356789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEec
Q 000475 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g 801 (1470)
|||||++|||||+.+|+++||||||++||+.+...+.+ ++..+. +++|||++||+++++. .||+|++|++|++++.|
T Consensus 148 GqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~-~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g 226 (288)
T PRK13643 148 GQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQ-LFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCG 226 (288)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHH-HHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEEC
Confidence 99999999999999999999999999999999888775 454443 4899999999999986 49999999999999999
Q ss_pred ChhhHHh
Q 000475 802 KYEDLIA 808 (1470)
Q Consensus 802 ~~~~l~~ 808 (1470)
+++++..
T Consensus 227 ~~~~~~~ 233 (288)
T PRK13643 227 TPSDVFQ 233 (288)
T ss_pred CHHHHHc
Confidence 9999865
No 383
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=8.8e-35 Score=363.80 Aligned_cols=212 Identities=18% Similarity=0.219 Sum_probs=184.3
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+..++|++++
T Consensus 3 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 3 SLQISQGTFRLSD--TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred eEEEEeEEEEcCC--eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 3899999999964 34999999999999999999999999999999999999999999999999888777778888999
Q ss_pred EEccCCCC--C-------cccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1299 IIPQDPML--F-------QGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1299 iIpQdp~L--F-------~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
++||+|.+ + .-|+++|+... ...++++.++++..++.+.. |.++ ..||||||||++|||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LSgG~~qrv~la~ 148 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDE-VKDPARCEQLAQQFGITALL-------DRRF----KYLSTGETRKTLLCQ 148 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccc-hhHHHHHHHHHHHcCCHhhh-------hCCc----ccCCHHHHHHHHHHH
Confidence 99999753 2 35899998642 12345678888888886543 3333 469999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
||+++|++|+|||||++||+++.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|++++++++
T Consensus 149 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 225 (490)
T PRK10938 149 ALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQ 225 (490)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcc
Confidence 9999999999999999999999999999998864 46899999999999877 999999999999999999998753
No 384
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-34 Score=327.42 Aligned_cols=197 Identities=32% Similarity=0.440 Sum_probs=162.3
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+. .+.+++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 3 l~~~~l~~~~~~--------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 73 (239)
T cd03296 3 IEVRNVSKRFGD--------FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTI-LFGGEDATDVPVQE 73 (239)
T ss_pred EEEEeEEEEECC--------EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEECCcCCccc
Confidence 789999999963 357889 99999999999999999999999999999999999986 6655
Q ss_pred -EeEEEcCCCCCCC-ccHHHHHhcCCCC-------CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHH
Q 000475 660 -KKAYVPQSSWIQT-GTIRENILFGKDM-------RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1470)
Q Consensus 660 -~~ayv~Q~~~i~~-~Ti~eNI~~g~~~-------~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 726 (1470)
.++|++|+|.++. .|++||+.++... +. ++.++.++.+++.+ .......+||||||
T Consensus 74 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~ 142 (239)
T cd03296 74 RNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDW-----------LADRYPAQLSGGQR 142 (239)
T ss_pred cceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChh-----------hhhcChhhCCHHHH
Confidence 3799999998875 6999999986432 11 12223344444322 23456679999999
Q ss_pred HHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecCh
Q 000475 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKY 803 (1470)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 803 (1470)
||++||||++.+|+++||||||++||+++.+.+.+ ++..+. + ++|+|++||+++.+.. ||+|++|++|++++.|+.
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 221 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRR-WLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTP 221 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCH
Confidence 99999999999999999999999999999887765 455443 2 7899999999998765 999999999999999998
Q ss_pred hhHHh
Q 000475 804 EDLIA 808 (1470)
Q Consensus 804 ~~l~~ 808 (1470)
+++.+
T Consensus 222 ~~~~~ 226 (239)
T cd03296 222 DEVYD 226 (239)
T ss_pred HHHhc
Confidence 88764
No 385
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=336.87 Aligned_cols=205 Identities=25% Similarity=0.376 Sum_probs=166.9
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+.... ...+.+++ ||++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 2 ~l~~~~l~~~y~~~~~---~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~ 77 (287)
T PRK13637 2 SIKIENLTHIYMEGTP---FEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKI-IIDGVDITDKKVK 77 (287)
T ss_pred EEEEEEEEEECCCCCc---cccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEE-EECCEECCCcCcc
Confidence 3789999999974310 01368999 99999999999999999999999999999999999986 6654
Q ss_pred ------EeEEEcCCC--CCCCccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchH
Q 000475 660 ------KKAYVPQSS--WIQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1470)
Q Consensus 660 ------~~ayv~Q~~--~i~~~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 724 (1470)
.++||+|+| .+++.|++|||.|+.. .+. ++.+++++.+++.. .+..+.++.+||||
T Consensus 78 ~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------~~~~~~~~~~LSgG 148 (287)
T PRK13637 78 LSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDY---------EDYKDKSPFELSGG 148 (287)
T ss_pred HHHHhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCc---------hhhccCCcccCCHH
Confidence 369999997 5678899999998742 222 22344555555531 12244667899999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEec
Q 000475 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g 801 (1470)
||||++|||||+.+|+++||||||++||+.+...+++ ++..+. .++|||+|||+++++. .||+|++|++|++++.|
T Consensus 149 q~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g 227 (287)
T PRK13637 149 QKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILN-KIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQG 227 (287)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 9999999999999999999999999999999888865 455443 3789999999999986 59999999999999999
Q ss_pred ChhhHHh
Q 000475 802 KYEDLIA 808 (1470)
Q Consensus 802 ~~~~l~~ 808 (1470)
+.+++.+
T Consensus 228 ~~~~~~~ 234 (287)
T PRK13637 228 TPREVFK 234 (287)
T ss_pred CHHHHHh
Confidence 9988765
No 386
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=337.02 Aligned_cols=203 Identities=26% Similarity=0.390 Sum_probs=167.3
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+..+. ...+.|++ ||++++||+++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 3 l~~~~l~~~y~~~~~---~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~i~~~~~~~ 78 (290)
T PRK13634 3 ITFQKVEHRYQYKTP---FERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTV-TIGERVITAGKKNK 78 (290)
T ss_pred EEEEEEEEEECCCCc---ccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEE-EECCEECccccccc
Confidence 789999999974310 11458999 99999999999999999999999999999999999986 6665
Q ss_pred -------EeEEEcCCC--CCCCccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCch
Q 000475 660 -------KKAYVPQSS--WIQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1470)
Q Consensus 660 -------~~ayv~Q~~--~i~~~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 723 (1470)
.++||+|+| .+++.||+|||.|+.. .+. ++.+++++.++|..++ .+.+..+|||
T Consensus 79 ~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSg 148 (290)
T PRK13634 79 KLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL----------LARSPFELSG 148 (290)
T ss_pred hHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh----------hhCCcccCCH
Confidence 269999997 5778899999998742 122 2345556666664332 1356779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEe
Q 000475 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQS 800 (1470)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~ 800 (1470)
|||||++|||||+.+|+++||||||++||+.+...+.+ +++.+. .+.|||++||+++++.. ||+|++|++|++++.
T Consensus 149 Gq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~-~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~ 227 (290)
T PRK13634 149 GQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMME-MFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQ 227 (290)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999888765 454443 37899999999999865 999999999999999
Q ss_pred cChhhHHh
Q 000475 801 GKYEDLIA 808 (1470)
Q Consensus 801 g~~~~l~~ 808 (1470)
|+++++.+
T Consensus 228 g~~~~~~~ 235 (290)
T PRK13634 228 GTPREIFA 235 (290)
T ss_pred CCHHHHhc
Confidence 99988765
No 387
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.7e-35 Score=320.35 Aligned_cols=198 Identities=24% Similarity=0.415 Sum_probs=173.7
Q ss_pred cEEEEeEEEEeCCCC-------CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHH
Q 000475 1219 KIELENLLVQYNPTL-------PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~-------~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~ 1291 (1470)
-++++|++..|+... -.+++||||+|++||.+||||.|||||||+.++|.|+++|++|+|+++|.|+..++
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~-- 81 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLS-- 81 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcc--
Confidence 478999999996432 26899999999999999999999999999999999999999999999999988765
Q ss_pred HHhcccEEEccCCCCCcccHHHhcCcCCCCCHHHHHHHHHHcCcHHH-HHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1292 DLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEI-VRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1292 ~LR~~isiIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~-v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
.+..++++.+.|+++|+.+. ..+-| ..||||||||++||||
T Consensus 82 ---------------------------~~~~~~~v~elL~~Vgl~~~~~~ryP-----------helSGGQrQRi~IARA 123 (268)
T COG4608 82 ---------------------------KEERRERVLELLEKVGLPEEFLYRYP-----------HELSGGQRQRIGIARA 123 (268)
T ss_pred ---------------------------hhHHHHHHHHHHHHhCCCHHHhhcCC-----------cccCchhhhhHHHHHH
Confidence 22345678999999998763 33333 4699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSS 1447 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~~s 1447 (1470)
|.-+|+++|+|||||+||....++|.+.+.+.. .+-|.+.|||+++.+.. ||||.||..|+|+|.|+.+++++++..
T Consensus 124 Lal~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~~~~p~H 203 (268)
T COG4608 124 LALNPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEVFSNPLH 203 (268)
T ss_pred HhhCCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHHhhCCCC
Confidence 999999999999999999999999999887643 47899999999999987 999999999999999999999999988
Q ss_pred hHHHHHHHH
Q 000475 1448 SFSKLVAEF 1456 (1470)
Q Consensus 1448 ~f~~lv~~~ 1456 (1470)
.|.+..-+.
T Consensus 204 pYTk~Ll~a 212 (268)
T COG4608 204 PYTKALLSA 212 (268)
T ss_pred HHHHHHHHh
Confidence 887665444
No 388
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.7e-34 Score=364.12 Aligned_cols=220 Identities=24% Similarity=0.399 Sum_probs=182.6
Q ss_pred cEEEEeEEEEeCCC--CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEEcCEeCCCCCHH
Q 000475 1219 KIELENLLVQYNPT--LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMIGLQ 1291 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~--~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i~l~ 1291 (1470)
-|+++|++++|+.+ ...+|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 23699999999999999999999999999999999999986 799999999999887654
Q ss_pred H---Hh-cccEEEccCCC--CCc-ccHHHhcCc----CCCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCC
Q 000475 1292 D---LR-SRLSIIPQDPM--LFQ-GTVRTNLDP----LEQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGEN 1356 (1470)
Q Consensus 1292 ~---LR-~~isiIpQdp~--LF~-gTIR~NLdp----~~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~n 1356 (1470)
+ .| ++++|+||+|. ++. -|+++|+.. ....+ .+++.++++.+++.+... -+|..+ .+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----~~~~~~----~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAK----RLTDYP----HQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHH----HHhhCC----cc
Confidence 3 34 58999999985 444 489998752 11122 245677888888753211 123333 46
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000475 1357 WSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVL 1433 (1470)
Q Consensus 1357 LSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vv 1433 (1470)
||||||||++|||||+.+|++|+||||||+||+.+...+.+.|++.. .+.|||+|+|+++.+.. ||||++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998853 37899999999999876 9999999999999
Q ss_pred EecChhHHhhcCC
Q 000475 1434 EYDSPRQLLEDNS 1446 (1470)
Q Consensus 1434 E~g~p~~Ll~~~~ 1446 (1470)
+.|+++++++.+.
T Consensus 237 ~~g~~~~~~~~~~ 249 (529)
T PRK15134 237 EQNRAATLFSAPT 249 (529)
T ss_pred EeCCHHHHhhCCC
Confidence 9999999986544
No 389
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=345.61 Aligned_cols=201 Identities=26% Similarity=0.381 Sum_probs=166.7
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|.. ...+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 3 ~l~i~~l~~~~~~--------~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I-~~~g~~i~~~~~~ 73 (369)
T PRK11000 3 SVTLRNVTKAYGD--------VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDL-FIGEKRMNDVPPA 73 (369)
T ss_pred EEEEEEEEEEeCC--------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEE-EECCEECCCCCHh
Confidence 3789999999963 247888 99999999999999999999999999999999999986 6765
Q ss_pred --EeEEEcCCCCCCC-ccHHHHHhcCCCC---CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHH
Q 000475 660 --KKAYVPQSSWIQT-GTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1470)
Q Consensus 660 --~~ayv~Q~~~i~~-~Ti~eNI~~g~~~---~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 729 (1470)
.++||+|++.++. .||+|||.|+... +. ++.+++++.+++.+. .+....+|||||||||
T Consensus 74 ~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~-----------~~~~~~~LSgGq~QRv 142 (369)
T PRK11000 74 ERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHL-----------LDRKPKALSGGQRQRV 142 (369)
T ss_pred HCCEEEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhh-----------hcCChhhCCHHHHHHH
Confidence 3799999998875 6999999987432 21 234445555555432 2355678999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhhH
Q 000475 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDL 806 (1470)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 806 (1470)
+|||||+.+|+++|||||||+||+.+...+.+. ++.+. + ++|+|+|||+++++.. ||+|++|++|++.+.|+++++
T Consensus 143 aLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i 221 (369)
T PRK11000 143 AIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIE-ISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLEL 221 (369)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999999999999999999998887664 44443 3 7899999999998765 999999999999999999998
Q ss_pred Hhhch
Q 000475 807 IADQN 811 (1470)
Q Consensus 807 ~~~~~ 811 (1470)
...+.
T Consensus 222 ~~~p~ 226 (369)
T PRK11000 222 YHYPA 226 (369)
T ss_pred HhCcc
Confidence 76433
No 390
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.5e-34 Score=343.68 Aligned_cols=203 Identities=27% Similarity=0.365 Sum_probs=168.0
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCC--CcEEEECC------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRIS--GAAIKVHG------ 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~--G~~i~~~g------ 659 (1470)
..++++|++++|.. ...+++ ||++++|++++|+|||||||||||++|+|+.+|++ |++ .++|
T Consensus 4 ~~l~~~~l~~~~~~--------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i-~~~g~~~~~~ 74 (362)
T TIGR03258 4 GGIRIDHLRVAYGA--------NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRI-AIADRDLTHA 74 (362)
T ss_pred eEEEEEEEEEEECC--------eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEE-EECCEECCCC
Confidence 45899999999963 257888 99999999999999999999999999999999999 986 7766
Q ss_pred -----EeEEEcCCCCCCC-ccHHHHHhcCCCC---C----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHH
Q 000475 660 -----KKAYVPQSSWIQT-GTIRENILFGKDM---R----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1470)
Q Consensus 660 -----~~ayv~Q~~~i~~-~Ti~eNI~~g~~~---~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 726 (1470)
.++||+|++.++. .||+|||.|+... . .++.+++++..+|.+. .+.+..+||||||
T Consensus 75 ~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~-----------~~~~~~~LSgGq~ 143 (362)
T TIGR03258 75 PPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDA-----------AAHLPAQLSGGMQ 143 (362)
T ss_pred CHHHCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCch-----------hhCChhhCCHHHH
Confidence 3699999998875 5999999987532 2 1234444555554432 3456679999999
Q ss_pred HHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcC--CcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecCh
Q 000475 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLS--QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKY 803 (1470)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~--~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 803 (1470)
|||+|||||..+|+++|||||||+||+....++.+.+..-..+ +.|+|+||||++++.. ||+|++|++|++++.|++
T Consensus 144 QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~ 223 (362)
T TIGR03258 144 QRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEP 223 (362)
T ss_pred HHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 9999999999999999999999999999988887654332223 6899999999998765 999999999999999999
Q ss_pred hhHHhhch
Q 000475 804 EDLIADQN 811 (1470)
Q Consensus 804 ~~l~~~~~ 811 (1470)
+++...+.
T Consensus 224 ~~~~~~p~ 231 (362)
T TIGR03258 224 QALYDAPA 231 (362)
T ss_pred HHHHhCcC
Confidence 99987443
No 391
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=341.83 Aligned_cols=201 Identities=34% Similarity=0.466 Sum_probs=166.2
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|.. ...+++ ||++++||+++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 2 ~L~i~~l~~~~~~--------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I-~i~g~~i~~~~~~ 72 (353)
T PRK10851 2 SIEIANIKKSFGR--------TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHI-RFHGTDVSRLHAR 72 (353)
T ss_pred EEEEEEEEEEeCC--------eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEE-EECCEECCCCCHH
Confidence 3789999999963 257888 99999999999999999999999999999999999986 7765
Q ss_pred --EeEEEcCCCCCCC-ccHHHHHhcCCCC-------CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 660 --KKAYVPQSSWIQT-GTIRENILFGKDM-------RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 660 --~~ayv~Q~~~i~~-~Ti~eNI~~g~~~-------~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
.++||+|++.++. .|++|||.|+... +. ++.+++++..++.+ ....+..+|||||
T Consensus 73 ~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----------~~~~~~~~LSgGq 141 (353)
T PRK10851 73 DRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAH-----------LADRYPAQLSGGQ 141 (353)
T ss_pred HCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCch-----------hhhCChhhCCHHH
Confidence 3799999998875 6999999997532 11 22333444444432 2335678999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecC
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~ 802 (1470)
||||+|||||+.+|+++|||||||+||+.+...+.+. ++.+. + ++|+|+|||+++++.. ||+|++|++|++++.|+
T Consensus 142 ~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~ 220 (353)
T PRK10851 142 KQRVALARALAVEPQILLLDEPFGALDAQVRKELRRW-LRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGT 220 (353)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcC
Confidence 9999999999999999999999999999998888764 44443 3 7899999999998765 99999999999999999
Q ss_pred hhhHHhhch
Q 000475 803 YEDLIADQN 811 (1470)
Q Consensus 803 ~~~l~~~~~ 811 (1470)
++++...+.
T Consensus 221 ~~~i~~~p~ 229 (353)
T PRK10851 221 PDQVWREPA 229 (353)
T ss_pred HHHHHhCcc
Confidence 999876433
No 392
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.4e-34 Score=325.72 Aligned_cols=194 Identities=28% Similarity=0.413 Sum_probs=159.3
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCC-----cCCCCcEEEECC-----
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEI-----PRISGAAIKVHG----- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~-----~~~~G~~i~~~g----- 659 (1470)
++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|.+ +|++|++ .++|
T Consensus 1 i~~~~l~~~~~~--------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i-~~~g~~~~~ 71 (227)
T cd03260 1 IELRDLNVYYGD--------KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEV-LLDGKDIYD 71 (227)
T ss_pred CEEEEEEEEcCC--------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEE-EECCEEhhh
Confidence 468899999863 357889 9999999999999999999999999999999 9999986 6655
Q ss_pred ----------EeEEEcCCCCCCCccHHHHHhcCCCC----C----HHHHHHHHHHhcchHHHHhccCCCcccccCC--CC
Q 000475 660 ----------KKAYVPQSSWIQTGTIRENILFGKDM----R----QSFYEEVLEGCALNQDIEMWADGDLSVVGER--GI 719 (1470)
Q Consensus 660 ----------~~ayv~Q~~~i~~~Ti~eNI~~g~~~----~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~--g~ 719 (1470)
.++|++|++.+++.|++||+.++... . +++.+++++.+++.+... .+ +.
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~~ 140 (227)
T cd03260 72 LDVDVLELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVK-----------DRLHAL 140 (227)
T ss_pred cchHHHHHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHh-----------ccCCcc
Confidence 36999999988888999999886421 1 123344455555543322 22 57
Q ss_pred CCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEE
Q 000475 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1470)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~ 798 (1470)
+||||||||++||||++.+|+++||||||++||+.+...+++ ++..+.+++|+|++||+++++.. ||+|++|++|+++
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~ 219 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEE-LIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLV 219 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEE
Confidence 899999999999999999999999999999999999888865 45554444899999999998765 9999999999999
Q ss_pred EecChhh
Q 000475 799 QSGKYED 805 (1470)
Q Consensus 799 ~~g~~~~ 805 (1470)
+.|+.++
T Consensus 220 ~~g~~~~ 226 (227)
T cd03260 220 EFGPTEQ 226 (227)
T ss_pred EecCccc
Confidence 9988765
No 393
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=4.6e-31 Score=320.31 Aligned_cols=436 Identities=19% Similarity=0.232 Sum_probs=302.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccCCC--CHH------HHHHHHHHhHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 000475 339 YFGANRIGIRVRSALTVLIYKRSMAIKFAGP--SSG------IIINMINVDVERIGDFFLYIHR-IWLLPVQVFLALVIL 409 (1470)
Q Consensus 339 ~~~~~r~g~rir~~L~~~iy~K~L~ls~~~~--~~G------~ivnlms~D~~~i~~~~~~~~~-~w~~pl~i~~~~~lL 409 (1470)
.|..+++..+.|.-|+..+..|=|.-...-+ ..| ..=..+..|+..+.+....+.. +.-..++++.-..+|
T Consensus 107 ~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iL 186 (604)
T COG4178 107 TWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGIL 186 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567889999999999999998886543222 222 1235778888777665544333 333334444445567
Q ss_pred HHHhhhHH--------HHHHHH--HHHHHHHHHH----HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhHHHHHhccHH
Q 000475 410 YKNLGAAP--------AFAALF--STIFVMVSNT----PLANRQERFHSMIME-AKDARIKATSETLKSMRVLKLLSWEQ 474 (1470)
Q Consensus 410 ~~~lG~~~--------~l~~l~--~~~i~~~~~~----~~~~~~~~~~~~~~~-~~D~R~~~~~E~L~~ik~IK~~~wE~ 474 (1470)
|..-|..+ .++|.. ++++..++.. .++|..-+.-.+..+ .-|-|- ....+.++-..|-+|+-|+
T Consensus 187 w~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~-~Lvrv~enaE~IAly~GE~ 265 (604)
T COG4178 187 WSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRY-SLVRVRENAEAIALYRGEK 265 (604)
T ss_pred HHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHH-HHHHHHhhHHHHHHhcCcH
Confidence 74444110 112211 1222223333 334433332222222 223343 3446778888999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000475 475 EFLKKLLRLREIERDSLKKY-------LYTCSAIAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIY 547 (1470)
Q Consensus 475 ~f~~~i~~~R~~E~~~l~~~-------~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~~~~~l~~pl~ 547 (1470)
.-++++++.-..=++..++. ........++....|.++ .+-.+..+.++.|.+..+...|+.+...+.
T Consensus 266 ~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li-----~ap~~f~g~i~~G~lmqa~~aF~~v~ssls 340 (604)
T COG4178 266 VERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILI-----AAPRYFSGQITFGGLMQAVGAFGQVHSSLS 340 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHh-----ccHhhhcCcChHHHHHHHHHHHHHHHHHHH
Confidence 87777765433222221111 111111111111222221 112246788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccC--CCC-CCCCCCC------CCCCccEEEeeeEEEeCCCccccCCCcccccC-c
Q 000475 548 NLPELISMIAQTKVSLYRIQEFIKEDN--QKK-PITEPTS------KASDVAIDIEAGEYAWDAREENFKKPTIKLTD-K 617 (1470)
Q Consensus 548 ~lp~~i~~~~~a~vs~~Ri~~fL~~~e--~~~-~~~~~~~------~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-n 617 (1470)
.+-+.+..+.+-++++.|+.+|-..-+ +.+ .....+. +..+..|.++|++..-++. .+.+++ |
T Consensus 341 wfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~-------~~ll~~l~ 413 (604)
T COG4178 341 WFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG-------QTLLSELN 413 (604)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC-------Ceeeccce
Confidence 999999999999999999999985433 111 1000000 1114679999999987754 467788 9
Q ss_pred eEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC-EeEEEcCCCCCCCccHHHHHhcCCC---CCHHHHHHH
Q 000475 618 MKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-KKAYVPQSSWIQTGTIRENILFGKD---MRQSFYEEV 693 (1470)
Q Consensus 618 l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-~~ayv~Q~~~i~~~Ti~eNI~~g~~---~~~~~y~~v 693 (1470)
+.+++|+.+.|.|+||||||||+++|.|..|--+|++..-.+ .+-|+||.|.++.||.||-|++... ++++.+.++
T Consensus 414 ~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~v 493 (604)
T COG4178 414 FEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAV 493 (604)
T ss_pred eeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHH
Confidence 999999999999999999999999999999999998633323 3799999999999999999999753 678889999
Q ss_pred HHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEE
Q 000475 694 LEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTV 773 (1470)
Q Consensus 694 ~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tv 773 (1470)
+..|+|.+-.+.+.+-+ .-...||||||||++.||.++++|++++|||.|||||+.++..+++ .+++.+.+.|+
T Consensus 494 L~~vgL~~L~~rl~~~~-----~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q-~l~~~lp~~tv 567 (604)
T COG4178 494 LHKVGLGDLAERLDEED-----RWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQ-LLKEELPDATV 567 (604)
T ss_pred HHHcCcHHHHHHHhccC-----cHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHH-HHHhhCCCCEE
Confidence 99999998888865533 2456799999999999999999999999999999999999988876 56777789999
Q ss_pred EEEcCCcchhhhcCEEEEEe
Q 000475 774 LYTTHQLEFLDAADLVLVMK 793 (1470)
Q Consensus 774 ilvtH~~~~l~~~d~i~~l~ 793 (1470)
|-|.|+.......++.+.+.
T Consensus 568 ISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 568 ISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred EEeccchhhHHHHhhheeec
Confidence 99999988777666666554
No 394
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.7e-34 Score=327.14 Aligned_cols=197 Identities=23% Similarity=0.367 Sum_probs=160.4
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+. .+.+++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~--------~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 71 (236)
T cd03219 1 LEVRGLTKRFGG--------LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSV-LFDGEDITGLPPHE 71 (236)
T ss_pred CeeeeeEEEECC--------EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceE-EECCEECCCCCHHH
Confidence 367899999963 357888 99999999999999999999999999999999999986 6654
Q ss_pred ----EeEEEcCCCCCCC-ccHHHHHhcCCCCC-------------H----HHHHHHHHHhcchHHHHhccCCCcccccCC
Q 000475 660 ----KKAYVPQSSWIQT-GTIRENILFGKDMR-------------Q----SFYEEVLEGCALNQDIEMWADGDLSVVGER 717 (1470)
Q Consensus 660 ----~~ayv~Q~~~i~~-~Ti~eNI~~g~~~~-------------~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~ 717 (1470)
.++|++|++.++. .|++||+.++.... . ++.++.++..++ ....+.+
T Consensus 72 ~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~ 140 (236)
T cd03219 72 IARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGL-----------ADLADRP 140 (236)
T ss_pred HHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCc-----------cchhhCC
Confidence 2799999988776 49999998864211 1 112222222222 2234567
Q ss_pred CCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCC
Q 000475 718 GINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDG 795 (1470)
Q Consensus 718 g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G 795 (1470)
..+||||||||++||||++.+|++++|||||++||+.+...+++. +..+. +++|+|++||+++++.. ||+|++|++|
T Consensus 141 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G 219 (236)
T cd03219 141 AGELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAEL-IRELRERGITVLLVEHDMDVVMSLADRVTVLDQG 219 (236)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCC
Confidence 789999999999999999999999999999999999998888764 44433 68999999999999865 9999999999
Q ss_pred EEEEecChhhHHh
Q 000475 796 KIEQSGKYEDLIA 808 (1470)
Q Consensus 796 ~i~~~g~~~~l~~ 808 (1470)
++.+.|+++++..
T Consensus 220 ~i~~~~~~~~~~~ 232 (236)
T cd03219 220 RVIAEGTPDEVRN 232 (236)
T ss_pred EEEeecCHHHhcc
Confidence 9999998887754
No 395
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=333.87 Aligned_cols=201 Identities=28% Similarity=0.422 Sum_probs=167.2
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+.. ...+.+++ ||++++||+++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 4 ~l~~~~l~~~~~~~-----~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~i~~~~~~ 77 (279)
T PRK13650 4 IIEVKNLTFKYKED-----QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQI-IIDGDLLTEENVW 77 (279)
T ss_pred eEEEEeEEEEcCCC-----CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE-EECCEECCcCcHH
Confidence 48899999999742 12357899 99999999999999999999999999999999999986 6666
Q ss_pred ----EeEEEcCCCC--CCCccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHH
Q 000475 660 ----KKAYVPQSSW--IQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1470)
Q Consensus 660 ----~~ayv~Q~~~--i~~~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 726 (1470)
.++|++|+|. ++..||+|||.|+.. .+. ++.+++++..++.+.. .....+||||||
T Consensus 78 ~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LSgGq~ 146 (279)
T PRK13650 78 DIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFK-----------EREPARLSGGQK 146 (279)
T ss_pred HHHhhceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHh-----------hCCcccCCHHHH
Confidence 3699999984 567899999998742 222 3345556666664332 345679999999
Q ss_pred HHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChh
Q 000475 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYE 804 (1470)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~ 804 (1470)
||++||||++.+|+++||||||++||+.+...+++ ++..+. .|+|+|++||+++.+..||+|++|++|+++..|+.+
T Consensus 147 qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~ 225 (279)
T PRK13650 147 QRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIK-TIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPR 225 (279)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999998887765 455443 389999999999998779999999999999999988
Q ss_pred hHHh
Q 000475 805 DLIA 808 (1470)
Q Consensus 805 ~l~~ 808 (1470)
++..
T Consensus 226 ~~~~ 229 (279)
T PRK13650 226 ELFS 229 (279)
T ss_pred HHHc
Confidence 8765
No 396
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.5e-34 Score=320.52 Aligned_cols=195 Identities=22% Similarity=0.264 Sum_probs=167.6
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
-++++|++++|++ ..+++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNE--EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCC--ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 5899999999964 3599999999999999999999999999999999999999999999999998752 4466899
Q ss_pred EEccCCCCCcc-cHHHhcCcC----CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHcc
Q 000475 1299 IIPQDPMLFQG-TVRTNLDPL----EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1373 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp~----~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1373 (1470)
++||+|.+|.+ |+++|+... +...++.+.++++..++.+. ++..+ .+||+|||||++||||+++
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LS~G~~qrv~laral~~ 154 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGY-------EDTLV----RQLSAGQKKRLALARLWLS 154 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCChhh-------ccCCh----hhCCHHHHHHHHHHHHHhc
Confidence 99999999887 999998532 22234456677777776443 34443 4699999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecChhhhhh-cCEEEEEeC
Q 000475 1374 KKRILVLDEATASIDTATDNVIQQTIREE-TSRCTVITVAHRIPTVID-NDLVLVLDE 1429 (1470)
Q Consensus 1374 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~-~~~~TVI~IAHRl~ti~~-~DrIlvL~~ 1429 (1470)
+|++|+|||||++||+++.+.+.+.|++. .+++|+|++||+++.+.+ ||++++++.
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 155 PAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 99999999999999999999999999865 357899999999999976 999999975
No 397
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=335.62 Aligned_cols=204 Identities=23% Similarity=0.354 Sum_probs=165.4
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.|+++|++++|+.... ...+.+++ ||++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 2 ~i~~~~l~~~y~~~~~---~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i-~~~g~~~~~~~~~ 77 (305)
T PRK13651 2 QIKVKNIVKIFNKKLP---TELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTI-EWIFKDEKNKKKT 77 (305)
T ss_pred EEEEEEEEEEECCCCC---ccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEE-EEeceeccccccc
Confidence 3789999999974310 11357899 99999999999999999999999999999999999986 5532
Q ss_pred ----------------------------EeEEEcCCC--CCCCccHHHHHhcCCC---CCH----HHHHHHHHHhcchHH
Q 000475 660 ----------------------------KKAYVPQSS--WIQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQD 702 (1470)
Q Consensus 660 ----------------------------~~ayv~Q~~--~i~~~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d 702 (1470)
.+|||+|+| .++..||+|||.|+.. .+. ++..++++.++|..+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~ 157 (305)
T PRK13651 78 KEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDES 157 (305)
T ss_pred ccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh
Confidence 269999986 4677899999998752 222 233444555555322
Q ss_pred HHhccCCCcccccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcc
Q 000475 703 IEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLE 781 (1470)
Q Consensus 703 ~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~ 781 (1470)
..+....+||||||||++|||||+.+|+++||||||++||+.....+.+. +..+ ..++|||+|||+++
T Consensus 158 ----------~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivtHd~~ 226 (305)
T PRK13651 158 ----------YLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEI-FDNLNKQGKTIILVTHDLD 226 (305)
T ss_pred ----------hhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeeCHH
Confidence 13456789999999999999999999999999999999999988777654 4443 34899999999999
Q ss_pred hhh-hcCEEEEEeCCEEEEecChhhHHh
Q 000475 782 FLD-AADLVLVMKDGKIEQSGKYEDLIA 808 (1470)
Q Consensus 782 ~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 808 (1470)
++. .||+|++|++|++++.|+.+++..
T Consensus 227 ~~~~~adrv~vl~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 227 NVLEWTKRTIFFKDGKIIKDGDTYDILS 254 (305)
T ss_pred HHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 875 599999999999999999988865
No 398
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.8e-34 Score=327.40 Aligned_cols=202 Identities=27% Similarity=0.393 Sum_probs=165.5
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCC-----CCcEEEECC----
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRI-----SGAAIKVHG---- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~-----~G~~i~~~g---- 659 (1470)
.++++|++++|+. ...+++ ||++++||+++|+|+||||||||+++|+|.++|+ +|++ .++|
T Consensus 1 ~l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i-~~~g~~~~ 71 (247)
T TIGR00972 1 AIEIENLNLFYGE--------KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKV-LFDGQDIY 71 (247)
T ss_pred CEEEEEEEEEECC--------eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEE-EECCEEcc
Confidence 3688999999963 247888 9999999999999999999999999999999988 9986 5544
Q ss_pred -----------EeEEEcCCCCCCCccHHHHHhcCCCC----CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~eNI~~g~~~----~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
.++|++|+++++..|++||+.++... .. ++.+++++..++.++++ ...+....+
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 144 (247)
T TIGR00972 72 DKKIDVVELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALG 144 (247)
T ss_pred ccccchHHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCccc
Confidence 37999999998889999999875321 11 22334444445442221 224567789
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEE
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~ 799 (1470)
||||||||++||||++.+|+++||||||++||+.+...+++ ++..+.+++|+|++||+++.+.. ||+|++|++|++++
T Consensus 145 LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 223 (247)
T TIGR00972 145 LSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEE-LIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVE 223 (247)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999887765 56555556899999999998865 99999999999999
Q ss_pred ecChhhHHh
Q 000475 800 SGKYEDLIA 808 (1470)
Q Consensus 800 ~g~~~~l~~ 808 (1470)
.|+.+++..
T Consensus 224 ~~~~~~~~~ 232 (247)
T TIGR00972 224 YGPTEQIFT 232 (247)
T ss_pred eCCHHHHHh
Confidence 999988765
No 399
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-34 Score=317.39 Aligned_cols=220 Identities=25% Similarity=0.422 Sum_probs=192.2
Q ss_pred cEEEEeEEEEeCCC----------------------CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCc
Q 000475 1219 KIELENLLVQYNPT----------------------LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGG 1276 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~----------------------~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G 1276 (1470)
.|+++||+.-|..+ ...-++|+||+|+.||+..|.|-||||||||+.++.|++||++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 57888888776532 12357899999999999999999999999999999999999999
Q ss_pred EEEEcCEeCCCCCHHHHh----cccEEEccCCCCCcc-cHHHhcCcCCC---C----CHHHHHHHHHHcCcHHHHHhccc
Q 000475 1277 RILIDGVDISMIGLQDLR----SRLSIIPQDPMLFQG-TVRTNLDPLEQ---H----SDQEIWEVINKCHLAEIVRQDQR 1344 (1470)
Q Consensus 1277 ~I~IDG~dI~~i~l~~LR----~~isiIpQdp~LF~g-TIR~NLdp~~~---~----sd~eI~~aL~~~~L~~~v~~lp~ 1344 (1470)
+|++||.||..++..+|| +++++|.|.--||+. ||-+|....-+ . ..+...++|+.+||.+|-.+.|+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 999999999999988774 589999999999877 99999875421 2 23447789999999999877764
Q ss_pred ccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-c
Q 000475 1345 LLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-N 1421 (1470)
Q Consensus 1345 gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHRl~ti~~-~ 1421 (1470)
.||||+|||+.|||||..+|+||++|||.|+|||--...+|+-|.+.. -++||+.|||+++.... -
T Consensus 164 -----------eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 164 -----------ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred -----------cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 589999999999999999999999999999999999999999887643 36899999999998765 9
Q ss_pred CEEEEEeCCEEEEecChhHHhhcCCChH
Q 000475 1422 DLVLVLDEGKVLEYDSPRQLLEDNSSSF 1449 (1470)
Q Consensus 1422 DrIlvL~~G~vvE~g~p~~Ll~~~~s~f 1449 (1470)
|||..|++|+|+..|+|+|.+.+|.-.|
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndY 260 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDY 260 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHH
Confidence 9999999999999999999999886544
No 400
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=328.47 Aligned_cols=203 Identities=24% Similarity=0.360 Sum_probs=166.4
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCc-----CCCCcEEEECC---
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKVHG--- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~~g--- 659 (1470)
..++++|++++|++ ...+++ ||++++|++++|+|+||||||||+++|+|..+ |++|++ .++|
T Consensus 5 ~~l~~~~l~~~~~~--------~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i-~~~g~~i 75 (253)
T PRK14242 5 PKMEARGLSFFYGD--------FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEI-LLDGENI 75 (253)
T ss_pred cEEEEeeeEEEECC--------eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEE-EECCEEc
Confidence 46899999999963 257889 99999999999999999999999999999864 578986 5544
Q ss_pred ------------EeEEEcCCCCCCCccHHHHHhcCCCC----C----HHHHHHHHHHhcchHHHHhccCCCcccccCCCC
Q 000475 660 ------------KKAYVPQSSWIQTGTIRENILFGKDM----R----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGI 719 (1470)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~----~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~ 719 (1470)
.++|++|++.+++.|++||+.++... . .++.++.++.+++.+.+. +..+..+.
T Consensus 76 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~ 148 (253)
T PRK14242 76 YDPHVDVVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESAL 148 (253)
T ss_pred cccccCHHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcc
Confidence 37999999988888999999986321 1 223344455555543222 23456788
Q ss_pred CCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEE
Q 000475 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1470)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~ 798 (1470)
+|||||||||+||||++.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++++.. ||+|++|++|+++
T Consensus 149 ~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~ 227 (253)
T PRK14242 149 GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEE-LIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLI 227 (253)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999877765 55555567899999999999865 9999999999999
Q ss_pred EecChhhHHh
Q 000475 799 QSGKYEDLIA 808 (1470)
Q Consensus 799 ~~g~~~~l~~ 808 (1470)
+.|+++++..
T Consensus 228 ~~g~~~~~~~ 237 (253)
T PRK14242 228 EVGPTEQIFT 237 (253)
T ss_pred EeCCHHHHHc
Confidence 9999988865
No 401
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=324.04 Aligned_cols=199 Identities=27% Similarity=0.397 Sum_probs=166.1
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 3 ~l~~~~l~~~~~~--------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~i~~~~~~ 73 (241)
T PRK14250 3 EIEFKEVSYSSFG--------KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSI-LIDGVDIKTIDVI 73 (241)
T ss_pred eEEEEeEEEEeCC--------eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEE-EECCEEhhhcChH
Confidence 4789999999853 357889 99999999999999999999999999999999999986 6665
Q ss_pred ----EeEEEcCCCCCCCccHHHHHhcCCCCC---HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHH
Q 000475 660 ----KKAYVPQSSWIQTGTIRENILFGKDMR---QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLA 732 (1470)
Q Consensus 660 ----~~ayv~Q~~~i~~~Ti~eNI~~g~~~~---~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 732 (1470)
.++|++|++.++..|++||+.++.... .++..++++.+++..+. ......+||||||||++||
T Consensus 74 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrl~la 143 (241)
T PRK14250 74 DLRRKIGMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY----------ATRDVKNLSGGEAQRVSIA 143 (241)
T ss_pred HhhhcEEEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH----------hhCCcccCCHHHHHHHHHH
Confidence 379999999988889999999864321 23444555655554221 2356778999999999999
Q ss_pred HHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhhHHh
Q 000475 733 RAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLIA 808 (1470)
Q Consensus 733 RAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 808 (1470)
||++.+|+++||||||++||+.+...+.+ ++..+. .++|+|++||+++++.. ||+|++|++|++++.|+.+++..
T Consensus 144 ~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 144 RTLANNPEVLLLDEPTSALDPTSTEIIEE-LIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 99999999999999999999998777765 454443 37999999999999875 99999999999999999988865
No 402
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-34 Score=300.53 Aligned_cols=213 Identities=28% Similarity=0.436 Sum_probs=184.4
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+.+|++++-. ...+|+|+||+++|||.+||+||||||||||+++|.|...|++|++.++|+++++.+..++-++-++
T Consensus 2 i~a~nls~~~~--Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 2 IRAENLSYSLA--GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred eeeeeeEEEee--cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 67889887654 3458999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCC-CcccHHHhcC----cCC---CCCHHH--HHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1300 IPQDPML-FQGTVRTNLD----PLE---QHSDQE--IWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1300 IpQdp~L-F~gTIR~NLd----p~~---~~sd~e--I~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
.||+..| |.-|++|-+. |.+ +..+++ ..++|.++++..+-.+ | -..||||||||+.|||
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R-----~------y~~LSGGEqQRVqlAR 148 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGR-----D------YRTLSGGEQQRVQLAR 148 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhcc-----c------hhhcCchHHHHHHHHH
Confidence 9999865 8889999875 442 222344 6788999988765432 1 1359999999999999
Q ss_pred HHcc------CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhh-hhcCEEEEEeCCEEEEecChhHH
Q 000475 1370 VLLK------KKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTV-IDNDLVLVLDEGKVLEYDSPRQL 1441 (1470)
Q Consensus 1370 ALLr------~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti-~~~DrIlvL~~G~vvE~g~p~~L 1441 (1470)
+|.+ ++|+|+||||||+||..-...+.++.|+.. +++.|+.|=|+++.. +.||||++|.+|||+..|+|++.
T Consensus 149 vLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~v 228 (259)
T COG4559 149 VLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDV 228 (259)
T ss_pred HHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHh
Confidence 9985 347999999999999999999999999865 579999999999976 55999999999999999999999
Q ss_pred hhcC
Q 000475 1442 LEDN 1445 (1470)
Q Consensus 1442 l~~~ 1445 (1470)
+..+
T Consensus 229 lt~E 232 (259)
T COG4559 229 LTDE 232 (259)
T ss_pred cCHH
Confidence 8753
No 403
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.7e-34 Score=324.41 Aligned_cols=198 Identities=25% Similarity=0.360 Sum_probs=164.1
Q ss_pred EEEEeEEEEeCC----C-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEc--C--EeCCCCCH
Q 000475 1220 IELENLLVQYNP----T-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILID--G--VDISMIGL 1290 (1470)
Q Consensus 1220 I~~~nvs~~Y~~----~-~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~ID--G--~dI~~i~l 1290 (1470)
|+++|++++|+. + .+++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+| | +++...+.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 789999999963 1 2469999999999999999999999999999999999999999999998 4 37766665
Q ss_pred HH---H-hcccEEEccCCCCCcc-cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCC
Q 000475 1291 QD---L-RSRLSIIPQDPMLFQG-TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWS 1358 (1470)
Q Consensus 1291 ~~---L-R~~isiIpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS 1358 (1470)
.. + +++++|+||+|.+|.. |+++|+... .... ++++.++++..++.+... +. .+.+||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~------~~----~~~~LS 151 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLW------HL----PPATFS 151 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh------hC----CcccCC
Confidence 54 3 4679999999988875 999998531 1122 345667777777644221 22 245799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEE
Q 000475 1359 VGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVL 1427 (1470)
Q Consensus 1359 gGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL 1427 (1470)
+|||||++|||||+++|++|+|||||++||+++.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|+.+
T Consensus 152 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 152 GGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 999999999999999999999999999999999999999999864 47899999999998864 9999876
No 404
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.7e-34 Score=318.36 Aligned_cols=192 Identities=22% Similarity=0.309 Sum_probs=164.5
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. ....+|+++++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 689999999964 359999999999999999999999999999999999999999999999999875 34567899999
Q ss_pred EccCCCCC-cccHHHhcCcC--CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000475 1300 IPQDPMLF-QGTVRTNLDPL--EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1376 (1470)
Q Consensus 1300 IpQdp~LF-~gTIR~NLdp~--~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1376 (1470)
+||++.++ ..|+++|+... ....+.++.++++..++.+. .|.++ .+||+|||||++||||++++|+
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LS~G~~~rv~laral~~~p~ 147 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVGITELCRLFSLEHL-------IDYPC----GLLSSGQKRQVALLRLWMSKAK 147 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHHHHHHHHHcCCchh-------hhCCh----hhcCHHHHHHHHHHHHHhcCCC
Confidence 99999886 56999998632 11234456777777776442 23333 3699999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecChhhhhhcCEEE
Q 000475 1377 ILVLDEATASIDTATDNVIQQTIREE-TSRCTVITVAHRIPTVIDNDLVL 1425 (1470)
Q Consensus 1377 ILlLDEaTsslD~~Td~~Iq~~I~~~-~~~~TVI~IAHRl~ti~~~DrIl 1425 (1470)
+|+|||||++||..+.+.+.+.|++. .+++|+|++||+...+.+||.-.
T Consensus 148 ~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~ 197 (200)
T PRK13540 148 LWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEE 197 (200)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhh
Confidence 99999999999999999999999975 35789999999999998898654
No 405
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-34 Score=321.32 Aligned_cols=190 Identities=32% Similarity=0.417 Sum_probs=155.6
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+. .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~--------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i-~~~g~~~~~~~~~~ 71 (213)
T cd03259 1 LELKGLSKTYGS--------VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEI-LIDGRDVTGVPPER 71 (213)
T ss_pred CeeeeeEEEeCC--------eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEE-EECCEEcCcCchhh
Confidence 467899999963 357889 99999999999999999999999999999999999986 6655
Q ss_pred -EeEEEcCCCCCCC-ccHHHHHhcCCCC---CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHH
Q 000475 660 -KKAYVPQSSWIQT-GTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQ 730 (1470)
Q Consensus 660 -~~ayv~Q~~~i~~-~Ti~eNI~~g~~~---~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 730 (1470)
.++|++|++.++. .|++||+.++... +. ++.+++++.+++.+. .+....+||||||||++
T Consensus 72 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~ 140 (213)
T cd03259 72 RNIGMVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGL-----------LNRYPHELSGGQQQRVA 140 (213)
T ss_pred ccEEEEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhcChhhCCHHHHHHHH
Confidence 3799999987764 6999999876421 11 223444555544332 33556789999999999
Q ss_pred HHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000475 731 LARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 731 LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 801 (1470)
||||+..+|+++||||||++||+.+...+++ ++..+. .++|||++||+++++.. ||+|++|++|++++.|
T Consensus 141 la~al~~~p~~lllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 141 LARALAREPSLLLLDEPLSALDAKLREELRE-ELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999888775 454443 37899999999998765 9999999999998754
No 406
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=361.28 Aligned_cols=207 Identities=25% Similarity=0.365 Sum_probs=176.0
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCH-HHHhccc
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL-QDLRSRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l-~~LR~~i 1297 (1470)
.|+++|++++|+. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. +.+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 359999999999999999999999999999999999999999999999999976554 3468899
Q ss_pred EEEccCCCCCcc-cHHHhcCcCC-----C-CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000475 1298 SIIPQDPMLFQG-TVRTNLDPLE-----Q-HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1366 (1470)
Q Consensus 1298 siIpQdp~LF~g-TIR~NLdp~~-----~-~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1366 (1470)
+|+||+|.+|.+ |+++|+.... . .. ++++.++++.+++.+ .++.. ..+||||||||++
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~----~~~LSgGq~qrv~ 150 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDI-------DPDTP----LKYLSIGQRQMVE 150 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCC-------CcCCc----hhhCCHHHHHHHH
Confidence 999999988876 9999996421 1 12 234566677666532 12333 3569999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000475 1367 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSP 1438 (1470)
Q Consensus 1367 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p 1438 (1470)
|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.+++
T Consensus 151 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 151 IAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred HHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 9999999999999999999999999999999998753 47899999999999876 999999999999877654
No 407
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-34 Score=326.32 Aligned_cols=202 Identities=22% Similarity=0.344 Sum_probs=168.2
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCc---CCCCcEEEECC------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP---RISGAAIKVHG------ 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~---~~~G~~i~~~g------ 659 (1470)
.|+++|+++.|+. .+.+++ ||++++||+++|+|+||||||||+++|+|+++ |++|++ .++|
T Consensus 2 ~~~~~~l~~~~~~--------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i-~~~g~~i~~~ 72 (246)
T PRK14269 2 IAKTTNLNLFYGK--------KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLV-EIEGKDVKNQ 72 (246)
T ss_pred ceeeeeeEEEECC--------EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEE-EECCEecccC
Confidence 4789999999963 357889 99999999999999999999999999999974 689986 6665
Q ss_pred -------EeEEEcCCCCCCCccHHHHHhcCCCC---------CHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCch
Q 000475 660 -------KKAYVPQSSWIQTGTIRENILFGKDM---------RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1470)
Q Consensus 660 -------~~ayv~Q~~~i~~~Ti~eNI~~g~~~---------~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 723 (1470)
.++|++|++.+++.|++||+.++... .+++.+++++.+++.+.+.. ...+++.+|||
T Consensus 73 ~~~~~~~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~ 145 (246)
T PRK14269 73 DVVALRKNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSG 145 (246)
T ss_pred CHHHHhhhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCH
Confidence 37999999999889999999876321 11234456666666544332 23467789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecC
Q 000475 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1470)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~ 802 (1470)
||||||+||||++++|+++||||||++||+++...+.+ ++..+.+++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 146 G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~ 224 (246)
T PRK14269 146 GQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEE-LLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGE 224 (246)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECC
Confidence 99999999999999999999999999999998777765 55555568999999999998865 99999999999999999
Q ss_pred hhhHHh
Q 000475 803 YEDLIA 808 (1470)
Q Consensus 803 ~~~l~~ 808 (1470)
.+++..
T Consensus 225 ~~~~~~ 230 (246)
T PRK14269 225 SKEFFE 230 (246)
T ss_pred HHHHHh
Confidence 988865
No 408
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=332.39 Aligned_cols=197 Identities=29% Similarity=0.419 Sum_probs=164.4
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+.. .+.+++ ||++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 4 ~l~~~~l~~~~~~~-------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~ 75 (274)
T PRK13647 4 IIEVEDLHFRYKDG-------TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRV-KVMGREVNAENEK 75 (274)
T ss_pred eEEEEEEEEEeCCC-------CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEE-EECCEECCCCCHH
Confidence 48899999999632 357899 99999999999999999999999999999999999986 6665
Q ss_pred ----EeEEEcCCC--CCCCccHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHH
Q 000475 660 ----KKAYVPQSS--WIQTGTIRENILFGKD---MR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1470)
Q Consensus 660 ----~~ayv~Q~~--~i~~~Ti~eNI~~g~~---~~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 726 (1470)
.++|++|+| .++..|++||+.|+.. .+ +++++++++.+++.+.. .....+||||||
T Consensus 76 ~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LSgG~~ 144 (274)
T PRK13647 76 WVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFR-----------DKPPYHLSYGQK 144 (274)
T ss_pred HHHhhEEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHh-----------cCChhhCCHHHH
Confidence 369999998 5778899999998742 22 23445556666654332 244568999999
Q ss_pred HHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChh
Q 000475 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYE 804 (1470)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 804 (1470)
||++|||||..+|+++||||||++||+.+...+.+ ++..+ .+++|+|++||+++++. .||+|++|++|++++.|+.+
T Consensus 145 qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 223 (274)
T PRK13647 145 KRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLME-ILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKS 223 (274)
T ss_pred HHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999888865 45444 34899999999999985 59999999999999999986
Q ss_pred hH
Q 000475 805 DL 806 (1470)
Q Consensus 805 ~l 806 (1470)
++
T Consensus 224 ~~ 225 (274)
T PRK13647 224 LL 225 (274)
T ss_pred Hh
Confidence 54
No 409
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.7e-34 Score=322.50 Aligned_cols=188 Identities=24% Similarity=0.397 Sum_probs=154.2
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+.. ..+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 2 l~~~~l~~~~~~~------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 74 (216)
T TIGR00960 2 IRFEQVSKAYPGG------HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKI-RFNGQDLTRLRGRE 74 (216)
T ss_pred eEEEEEEEEecCC------CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEehhhcChhH
Confidence 6789999999642 2357889 99999999999999999999999999999999999986 6665
Q ss_pred ------EeEEEcCCCCCCC-ccHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 660 ------KKAYVPQSSWIQT-GTIRENILFGKD---MR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~eNI~~g~~---~~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
.++|++|++.++. .|++||+.++.. .. +++.+++++.+++.+.. .....+|||||
T Consensus 75 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~ 143 (216)
T TIGR00960 75 IPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKA-----------HALPMQLSGGE 143 (216)
T ss_pred HHHHHHhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHH
Confidence 3699999998765 699999987532 11 23344555555554322 34556899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEE
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i 797 (1470)
|||++||||++.+|+++||||||++||+.+...+.+ .+..+ .+++|+|+|||+++++.. ||+|++|++|++
T Consensus 144 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 144 QQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMR-LFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999888876 44444 347899999999999875 999999999975
No 410
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.8e-34 Score=391.53 Aligned_cols=215 Identities=22% Similarity=0.355 Sum_probs=189.2
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccE
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1298 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~is 1298 (1470)
.|+++|++++|+++...+++|+||++++||.+||+|+||||||||+++|.|+++|++|+|.++|.|+.+ ...+.|++++
T Consensus 928 ~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~IG 1006 (2272)
T TIGR01257 928 GVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSLG 1006 (2272)
T ss_pred eEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcEE
Confidence 599999999996434569999999999999999999999999999999999999999999999999975 5677899999
Q ss_pred EEccCCCCCcc-cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000475 1299 IIPQDPMLFQG-TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1370 (1470)
Q Consensus 1299 iIpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1370 (1470)
++||++.+|+. |+++||... ...+ ++++.+.|+.++|.+.. |..+ .+||||||||++||||
T Consensus 1007 ~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~~v~~lL~~vgL~~~~-------~~~~----~~LSGGqKQRLsLArA 1075 (2272)
T TIGR01257 1007 MCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKR-------NEEA----QDLSGGMQRKLSVAIA 1075 (2272)
T ss_pred EEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-------cCCh----hhCCHHHHHHHHHHHH
Confidence 99999999975 999999642 1122 34567778888775432 3333 5699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000475 1371 LLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1445 (1470)
Q Consensus 1371 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~~ 1445 (1470)
|+.+|+||+||||||+||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++.+|.++-
T Consensus 1076 Li~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~ 1151 (2272)
T TIGR01257 1076 FVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCF 1151 (2272)
T ss_pred HHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhc
Confidence 99999999999999999999999999999998778999999999999975 9999999999999999999997653
No 411
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-34 Score=326.52 Aligned_cols=203 Identities=26% Similarity=0.378 Sum_probs=165.7
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcC-----CCCcEEEECC---
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG--- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g--- 659 (1470)
..++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|+++| ++|++ .++|
T Consensus 6 ~~l~~~~l~~~~~~--------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i-~~~g~~i 76 (254)
T PRK14273 6 AIIETENLNLFYTD--------FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNV-IYEGKNI 76 (254)
T ss_pred ceEEEeeeEEEeCC--------ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEE-EECCEec
Confidence 36899999999963 247889 999999999999999999999999999999987 48986 5543
Q ss_pred ------------EeEEEcCCCCCCCccHHHHHhcCCCC----CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCC
Q 000475 660 ------------KKAYVPQSSWIQTGTIRENILFGKDM----RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGI 719 (1470)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~----~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~ 719 (1470)
.++|++|++.+++.|++|||.++... +. ++.+++++.+++...+. ...+.++.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~ 149 (254)
T PRK14273 77 YSNNFDILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK-------DKLNTNAL 149 (254)
T ss_pred ccccccHHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH-------HHHhCCcc
Confidence 37999999998889999999986421 11 22233444444432221 12345778
Q ss_pred CCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEE
Q 000475 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1470)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~ 798 (1470)
+|||||||||+||||++.+|+++||||||++||+.+...+++ ++..+.+++|+|++||+++++.. ||+|++|++|+++
T Consensus 150 ~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~ 228 (254)
T PRK14273 150 SLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEE-LIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIE 228 (254)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999888765 55555567899999999999765 9999999999999
Q ss_pred EecChhhHHh
Q 000475 799 QSGKYEDLIA 808 (1470)
Q Consensus 799 ~~g~~~~l~~ 808 (1470)
+.|+.+++..
T Consensus 229 ~~g~~~~~~~ 238 (254)
T PRK14273 229 EESSTDELFF 238 (254)
T ss_pred EeCCHHHHHh
Confidence 9999988865
No 412
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.3e-35 Score=294.10 Aligned_cols=217 Identities=29% Similarity=0.440 Sum_probs=188.8
Q ss_pred cEEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCC----------
Q 000475 1219 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI---------- 1288 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i---------- 1288 (1470)
.++++|+..+|.+. -||||||++.++|+.|.|+|.|||||||++.++.=+-.|+.|+|.++|..|..-
T Consensus 6 ~l~v~dlHK~~G~~--eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~a 83 (256)
T COG4598 6 ALEVEDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPA 83 (256)
T ss_pred ceehhHHHhhcccc--hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeC
Confidence 68899999999765 399999999999999999999999999999999999999999999999887542
Q ss_pred ---CHHHHhcccEEEccCCCCCcc-cHHHhcC--cC---CCCCHHHH---HHHHHHcCcHHHHHhcccccCccccCCCCC
Q 000475 1289 ---GLQDLRSRLSIIPQDPMLFQG-TVRTNLD--PL---EQHSDQEI---WEVINKCHLAEIVRQDQRLLDAPVAEDGEN 1356 (1470)
Q Consensus 1289 ---~l~~LR~~isiIpQdp~LF~g-TIR~NLd--p~---~~~sd~eI---~~aL~~~~L~~~v~~lp~gLdt~v~e~G~n 1356 (1470)
.++.+|+++++|.|+--|++. |+-+|.- |. +.-.++.+ ...|.++|+.+....-| ..
T Consensus 84 d~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----------~~ 152 (256)
T COG4598 84 DKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYP-----------AH 152 (256)
T ss_pred CHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCc-----------cc
Confidence 256789999999999999876 9999984 42 22223333 34578888887654433 36
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000475 1357 WSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLE 1434 (1470)
Q Consensus 1357 LSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE 1434 (1470)
|||||+||.+|||||.-+|+++++|||||+||++--..+.++|++.. .++|+++|||.+...++ +..|+.|.+|+|.|
T Consensus 153 LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE 232 (256)
T COG4598 153 LSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEE 232 (256)
T ss_pred cCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecc
Confidence 99999999999999999999999999999999999999999888754 68999999999999988 89999999999999
Q ss_pred ecChhHHhhcCCCh
Q 000475 1435 YDSPRQLLEDNSSS 1448 (1470)
Q Consensus 1435 ~g~p~~Ll~~~~s~ 1448 (1470)
.|+|+++..++.|.
T Consensus 233 ~G~P~qvf~nP~S~ 246 (256)
T COG4598 233 EGPPEQVFGNPQSP 246 (256)
T ss_pred cCChHHHhcCCCCH
Confidence 99999999999874
No 413
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-34 Score=321.83 Aligned_cols=195 Identities=24% Similarity=0.359 Sum_probs=159.4
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 1 i~~~~~~~~~~~--------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i-~~~g~~~~~~~~~~ 71 (220)
T cd03265 1 IEVENLVKKYGD--------FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRA-TVAGHDVVREPREV 71 (220)
T ss_pred CEEEEEEEEECC--------EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEecCcChHHH
Confidence 468899999963 357888 99999999999999999999999999999999999986 6665
Q ss_pred --EeEEEcCCCCCCC-ccHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHH
Q 000475 660 --KKAYVPQSSWIQT-GTIRENILFGKD---MR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1470)
Q Consensus 660 --~~ayv~Q~~~i~~-~Ti~eNI~~g~~---~~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 729 (1470)
.++|++|++.++. .|++||+.++.. .+ .++.+++++.+++.+. ......+||||||||+
T Consensus 72 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~ 140 (220)
T cd03265 72 RRRIGIVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEA-----------ADRLVKTYSGGMRRRL 140 (220)
T ss_pred hhcEEEecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCChhhCCHHHHHHH
Confidence 3799999987765 599999987521 11 1233445555555432 2345678999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cC-CcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhhH
Q 000475 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LS-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDL 806 (1470)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 806 (1470)
+||||++.+|+++||||||++||+++...+.+. +..+ .+ ++|+|++||+++++.. ||+|++|++|++++.|+.+++
T Consensus 141 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 141 EIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEY-IEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999998877654 4443 33 7899999999999875 999999999999998877653
No 414
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=7e-34 Score=315.41 Aligned_cols=188 Identities=26% Similarity=0.404 Sum_probs=159.3
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1470)
..++++|++++|+.. ..+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 5 ~~l~~~~l~~~~~~~------~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~ 77 (207)
T cd03369 5 GEIEVENLSVRYAPD------LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKI-EIDGIDISTIPL 77 (207)
T ss_pred CeEEEEEEEEEeCCC------CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeE-EECCEEhHHCCH
Confidence 458999999999742 2357889 99999999999999999999999999999999999986 6665
Q ss_pred -----EeEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHH
Q 000475 660 -----KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARA 734 (1470)
Q Consensus 660 -----~~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARA 734 (1470)
.++||+|+|.++++|++||+.+..+++.+. +.+.+. ++++..+||||||||++||||
T Consensus 78 ~~~~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~---~~~~l~---------------~~~~~~~LS~G~~qrv~lara 139 (207)
T cd03369 78 EDLRSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEE---IYGALR---------------VSEGGLNLSQGQRQLLCLARA 139 (207)
T ss_pred HHHHhhEEEEecCCcccCccHHHHhcccCCCCHHH---HHHHhh---------------ccCCCCcCCHHHHHHHHHHHH
Confidence 379999999999899999998755443322 222211 346788999999999999999
Q ss_pred HccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecC
Q 000475 735 VYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGK 802 (1470)
Q Consensus 735 l~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~ 802 (1470)
++.+|+++||||||++||+.+...+.+ .++.+.+++|+|++||+++.+..||++++|++|++.+.|+
T Consensus 140 l~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 140 LLKRPRVLVLDEATASIDYATDALIQK-TIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred HhhCCCEEEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 999999999999999999999877765 4555556899999999999987799999999999988775
No 415
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=333.06 Aligned_cols=204 Identities=24% Similarity=0.435 Sum_probs=165.1
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+... ....+.|++ ||++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 2 ~l~~~~l~~~y~~~~---~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i-~~~g~~i~~~~~~ 77 (286)
T PRK13646 2 TIRFDNVSYTYQKGT---PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTV-TVDDITITHKTKD 77 (286)
T ss_pred EEEEEEEEEEECCCC---ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE-EECCEECcccccc
Confidence 378999999997430 012358999 99999999999999999999999999999999999986 6655
Q ss_pred --------EeEEEcCCC--CCCCccHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHHhccCCCcccccCCCCCCc
Q 000475 660 --------KKAYVPQSS--WIQTGTIRENILFGKD---MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1470)
Q Consensus 660 --------~~ayv~Q~~--~i~~~Ti~eNI~~g~~---~~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LS 722 (1470)
.+|||+|+| .++..|++|||.|+.. .+.+ +.++.++.+++..+ ..+..+.+||
T Consensus 78 ~~~~~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LS 147 (286)
T PRK13646 78 KYIRPVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRD----------VMSQSPFQMS 147 (286)
T ss_pred chHHHHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCC
Confidence 369999997 5777899999998742 2222 22333344444211 2345678999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEE
Q 000475 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQ 799 (1470)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~ 799 (1470)
||||||++|||||+.+|+++||||||++||+.+...+.+ .++.+. .++|||+|||+++++. .||+|++|++|++++
T Consensus 148 gGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~ 226 (286)
T PRK13646 148 GGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMR-LLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVS 226 (286)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999888765 455443 4799999999999976 599999999999999
Q ss_pred ecChhhHHh
Q 000475 800 SGKYEDLIA 808 (1470)
Q Consensus 800 ~g~~~~l~~ 808 (1470)
.|+++++.+
T Consensus 227 ~g~~~~~~~ 235 (286)
T PRK13646 227 QTSPKELFK 235 (286)
T ss_pred ECCHHHHHh
Confidence 999988765
No 416
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.1e-34 Score=317.06 Aligned_cols=193 Identities=26% Similarity=0.362 Sum_probs=167.0
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. . ..|+++++
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~-~~~~~~~~ 77 (207)
T PRK13539 3 LEGEDLACVRGG--RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--P-DVAEACHY 77 (207)
T ss_pred EEEEeEEEEECC--eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--h-hhHhhcEE
Confidence 789999999964 359999999999999999999999999999999999999999999999998753 2 28889999
Q ss_pred EccCCCCC-cccHHHhcCcC---CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCC
Q 000475 1300 IPQDPMLF-QGTVRTNLDPL---EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1375 (1470)
Q Consensus 1300 IpQdp~LF-~gTIR~NLdp~---~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1375 (1470)
+||++.++ ..|+++|+... ....++++.++++..++.+... .++ ..||||||||++||||++++|
T Consensus 78 ~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~----~~LS~G~~qrl~la~al~~~p 146 (207)
T PRK13539 78 LGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLAPLAH-------LPF----GYLSAGQKRRVALARLLVSNR 146 (207)
T ss_pred ecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHc-------CCh----hhcCHHHHHHHHHHHHHhcCC
Confidence 99988765 57999998632 2234667889999999876432 222 369999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecChhhhhhcCEEEEEeC
Q 000475 1376 RILVLDEATASIDTATDNVIQQTIREE-TSRCTVITVAHRIPTVIDNDLVLVLDE 1429 (1470)
Q Consensus 1376 ~ILlLDEaTsslD~~Td~~Iq~~I~~~-~~~~TVI~IAHRl~ti~~~DrIlvL~~ 1429 (1470)
++|+|||||++||+.+.+.+.+.|++. .+++|+|+++|+++.+.. |+++.++.
T Consensus 147 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 147 PIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 999999999999999999999999874 357999999999999887 99988754
No 417
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-34 Score=321.21 Aligned_cols=196 Identities=32% Similarity=0.448 Sum_probs=159.0
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------Ee
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------KK 661 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------~~ 661 (1470)
++++|++++|+... ...+.+++ ||++++|++++|+||||||||||+++|+|..+|++|++ .++| .+
T Consensus 1 l~~~~l~~~~~~~~----~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGG----GAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEV-LVDGEPVTGPGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCC----cceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEECccccCcE
Confidence 46889999996420 11467889 99999999999999999999999999999999999986 6765 47
Q ss_pred EEEcCCCCCCC-ccHHHHHhcCCCC---C----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHH
Q 000475 662 AYVPQSSWIQT-GTIRENILFGKDM---R----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLAR 733 (1470)
Q Consensus 662 ayv~Q~~~i~~-~Ti~eNI~~g~~~---~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LAR 733 (1470)
+|++|++.++. .|++||+.++... . .++.++.++.+++.+. ...+..+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGF-----------ENAYPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhCCcccCCHHHHHHHHHHH
Confidence 99999998776 7999999876321 1 1233445555555432 23456789999999999999
Q ss_pred HHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-c-CCcEEEEEcCCcchhhh-cCEEEEEe--CCEEEEecCh
Q 000475 734 AVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-L-SQKTVLYTTHQLEFLDA-ADLVLVMK--DGKIEQSGKY 803 (1470)
Q Consensus 734 Al~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~-~d~i~~l~--~G~i~~~g~~ 803 (1470)
|++.+|+++||||||++||+.+...+++. +..+ . .++|+|++||+++++.. ||+|++|+ +|++++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEE-LLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 99999999999999999999998888764 4444 2 37899999999998765 99999999 7999987764
No 418
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=5.6e-34 Score=320.62 Aligned_cols=203 Identities=30% Similarity=0.447 Sum_probs=170.5
Q ss_pred CccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC-------
Q 000475 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------- 659 (1470)
Q Consensus 588 ~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------- 659 (1470)
...++++|++++|+.. ...+.+++ |+++++|++++|+||||||||||+++|+|+.+|++|++ .++|
T Consensus 9 ~~~l~~~~l~~~~~~~-----~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~ 82 (226)
T cd03248 9 KGIVKFQNVTFAYPTR-----PDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQV-LLDGKPISQYE 82 (226)
T ss_pred CceEEEEEEEEEeCCC-----CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEE-EECCCchHHcC
Confidence 4569999999999753 12357889 99999999999999999999999999999999999986 6665
Q ss_pred ------EeEEEcCCCCCCCccHHHHHhcCCCC-CHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHH
Q 000475 660 ------KKAYVPQSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLA 732 (1470)
Q Consensus 660 ------~~ayv~Q~~~i~~~Ti~eNI~~g~~~-~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 732 (1470)
.++|++|++.++..|++||+.++... ....+.+..+...+.+.++.++.|..+..++++.+|||||||||+||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~la 162 (226)
T cd03248 83 HKYLHSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIA 162 (226)
T ss_pred HHHHHhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHH
Confidence 37999999998889999999987542 22222333334455667788877777778889999999999999999
Q ss_pred HHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEE
Q 000475 733 RAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKI 797 (1470)
Q Consensus 733 RAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i 797 (1470)
||++++|+++||||||++||+++...+.+ .+..+.+++|+|++||+++++..||+|++|++|++
T Consensus 163 ral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 163 RALIRNPQVLILDEATSALDAESEQQVQQ-ALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999887765 45555567899999999999878999999999974
No 419
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=359.78 Aligned_cols=208 Identities=20% Similarity=0.340 Sum_probs=174.6
Q ss_pred EEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHH-HHhcccEEE
Q 000475 1222 LENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ-DLRSRLSII 1300 (1470)
Q Consensus 1222 ~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~-~LR~~isiI 1300 (1470)
++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|++++|+
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999964 3599999999999999999999999999999999999999999999999999876543 467889999
Q ss_pred ccCCCCCcc-cHHHhcCcCC----C--CCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1301 PQDPMLFQG-TVRTNLDPLE----Q--HSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1301 pQdp~LF~g-TIR~NLdp~~----~--~sd~----eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
||+|.+|.. |+++|+.... . .+.+ ++.++++.+++. ........+||||||||++|||
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgGq~qrv~lA~ 147 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDID-----------IDPRAKVATLSVSQMQMIEIAK 147 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCC-----------CCccCchhhCCHHHHHHHHHHH
Confidence 999987754 9999996321 1 1222 334445554442 2223334579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
||+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 148 AFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred HHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 9999999999999999999999999999998753 47899999999999876 9999999999999999988864
No 420
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=3.7e-34 Score=315.33 Aligned_cols=192 Identities=21% Similarity=0.326 Sum_probs=164.4
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRGE--RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DEPHRNILY 77 (198)
T ss_pred CEEEEEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccch-HHhhhheEE
Confidence 578999999964 35999999999999999999999999999999999999999999999999998765 457889999
Q ss_pred EccCCCCCc-ccHHHhcCcC---CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCC
Q 000475 1300 IPQDPMLFQ-GTVRTNLDPL---EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1375 (1470)
Q Consensus 1300 IpQdp~LF~-gTIR~NLdp~---~~~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1375 (1470)
+||++.+|. .|+++|+... ....++++.++++.+++.++. +..+ .+||+|||||++||||++++|
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrv~la~al~~~p 146 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGLTGFE-------DLPA----AQLSAGQQRRLALARLWLSRA 146 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHHHHHHcCCHHHh-------cCCh----hhcCHHHHHHHHHHHHHhcCC
Confidence 999998886 5999998532 111244688899999987654 2333 469999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecChhhhhhcCEEEE
Q 000475 1376 RILVLDEATASIDTATDNVIQQTIREE-TSRCTVITVAHRIPTVIDNDLVLV 1426 (1470)
Q Consensus 1376 ~ILlLDEaTsslD~~Td~~Iq~~I~~~-~~~~TVI~IAHRl~ti~~~DrIlv 1426 (1470)
++|+|||||++||..+.+.+.+.|++. .++.|+|+++|+... ..||+++.
T Consensus 147 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~-~~~~~~~~ 197 (198)
T TIGR01189 147 PLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLG-LVEARELR 197 (198)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccc-ccceEEee
Confidence 999999999999999999999999875 357899999999854 34677765
No 421
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-34 Score=341.08 Aligned_cols=205 Identities=26% Similarity=0.347 Sum_probs=167.8
Q ss_pred CccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE------
Q 000475 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK------ 660 (1470)
Q Consensus 588 ~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~------ 660 (1470)
...++++|++++|.. ...+++ ||++++|++++|+|||||||||||++|+|..+|++|++ .++|.
T Consensus 17 ~~~l~l~~v~~~~~~--------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I-~i~g~~i~~~~ 87 (377)
T PRK11607 17 TPLLEIRNLTKSFDG--------QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQI-MLDGVDLSHVP 87 (377)
T ss_pred CceEEEEeEEEEECC--------EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEE-EECCEECCCCC
Confidence 346999999999963 357888 99999999999999999999999999999999999986 77763
Q ss_pred -----eEEEcCCCCCCC-ccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHH
Q 000475 661 -----KAYVPQSSWIQT-GTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQ 727 (1470)
Q Consensus 661 -----~ayv~Q~~~i~~-~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 727 (1470)
+|||+|++-++. .||+|||.|+.. ... ++.+++++..++.+. ...+..+|||||||
T Consensus 88 ~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~-----------~~~~~~~LSgGq~Q 156 (377)
T PRK11607 88 PYQRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEF-----------AKRKPHQLSGGQRQ 156 (377)
T ss_pred HHHCCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHH
Confidence 699999998875 599999999743 222 223344444444322 23566799999999
Q ss_pred HHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhh
Q 000475 728 RIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYED 805 (1470)
Q Consensus 728 Rv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 805 (1470)
||+|||||+.+|+++|||||||+||+.....+.+.+.+-.. .+.|+|+||||.+++. .||+|++|++|++++.|++++
T Consensus 157 RVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~ 236 (377)
T PRK11607 157 RVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEE 236 (377)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHH
Confidence 99999999999999999999999999998877654433222 3789999999999865 599999999999999999999
Q ss_pred HHhhchh
Q 000475 806 LIADQNS 812 (1470)
Q Consensus 806 l~~~~~~ 812 (1470)
+..++..
T Consensus 237 ~~~~p~~ 243 (377)
T PRK11607 237 IYEHPTT 243 (377)
T ss_pred HHhCCcc
Confidence 8864443
No 422
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.5e-34 Score=325.06 Aligned_cols=196 Identities=28% Similarity=0.393 Sum_probs=160.1
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+.+ .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 2 l~~~~l~~~~~~~-------~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 73 (243)
T TIGR02315 2 LEVENLSKVYPNG-------KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSI-LLEGTDITKLRGKK 73 (243)
T ss_pred eEEEeeeeecCCC-------cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEE-EECCEEhhhCCHHH
Confidence 6789999999622 357889 99999999999999999999999999999999999986 6655
Q ss_pred ------EeEEEcCCCCCCC-ccHHHHHhcCCCC------------C---HHHHHHHHHHhcchHHHHhccCCCcccccCC
Q 000475 660 ------KKAYVPQSSWIQT-GTIRENILFGKDM------------R---QSFYEEVLEGCALNQDIEMWADGDLSVVGER 717 (1470)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~eNI~~g~~~------------~---~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~ 717 (1470)
.++|++|++.++. .|++||+.++... . .++..++++.+++.. ..+..
T Consensus 74 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~ 142 (243)
T TIGR02315 74 LRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLAD-----------KAYQR 142 (243)
T ss_pred HHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHh-----------hhcCC
Confidence 2699999988765 6999999876321 1 122333344444432 23456
Q ss_pred CCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeC
Q 000475 718 GINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKD 794 (1470)
Q Consensus 718 g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~ 794 (1470)
+.+||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+. .++|+|++||+++++.. ||+|++|++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMD-YLKRINKEDGITVIINLHQVDLAKKYADRIVGLKA 221 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEEC
Confidence 78999999999999999999999999999999999999877765 455443 37899999999999864 999999999
Q ss_pred CEEEEecChhhH
Q 000475 795 GKIEQSGKYEDL 806 (1470)
Q Consensus 795 G~i~~~g~~~~l 806 (1470)
|++++.|+++++
T Consensus 222 G~i~~~~~~~~~ 233 (243)
T TIGR02315 222 GEIVFDGAPSEL 233 (243)
T ss_pred CEEEecCCHHHh
Confidence 999999998876
No 423
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.7e-34 Score=294.94 Aligned_cols=191 Identities=29% Similarity=0.409 Sum_probs=164.9
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
|+|+|++..|+.. .+.|+| ||+|++||++-++||+|||||||+++|.++..|+.|++ .++|
T Consensus 2 I~f~~V~k~Y~~g-------~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i-~~~~~dl~~l~~~~ 73 (223)
T COG2884 2 IRFENVSKAYPGG-------REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKI-LVNGHDLSRLKGRE 73 (223)
T ss_pred eeehhhhhhcCCC-------chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceE-EECCeecccccccc
Confidence 7899999999853 568999 99999999999999999999999999999999999986 6655
Q ss_pred ------EeEEEcCCCC-CCCccHHHHHhcCCCC---C----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 660 ------KKAYVPQSSW-IQTGTIRENILFGKDM---R----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 660 ------~~ayv~Q~~~-i~~~Ti~eNI~~g~~~---~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
+||+|+|+-- +++.||.||+.|.... . +++..++++..+|.+....+| ..|||||
T Consensus 74 iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGE 142 (223)
T COG2884 74 IPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGE 142 (223)
T ss_pred cchhhheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchH
Confidence 4799999976 4678999999997532 1 345566778888888777766 4899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 801 (1470)
||||+||||+..+|+++|-||||-+|||..+..|++- +..+ ..|.||+++|||.+.+.. --+++.+++|+++...
T Consensus 143 QQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~l-feeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 143 QQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRL-FEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHH-HHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 9999999999999999999999999999999999864 4443 459999999999999987 5699999999998653
No 424
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-34 Score=324.70 Aligned_cols=197 Identities=27% Similarity=0.387 Sum_probs=159.7
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+.+ .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~~-------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 72 (241)
T cd03256 1 IEVENLSKTYPNG-------KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSV-LIDGTDINKLKGKA 72 (241)
T ss_pred CEEeeEEEecCCc-------cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceE-EECCEeccccCHhH
Confidence 4678999999641 357889 99999999999999999999999999999999999986 5654
Q ss_pred ------EeEEEcCCCCCCC-ccHHHHHhcCCCC------------CH---HHHHHHHHHhcchHHHHhccCCCcccccCC
Q 000475 660 ------KKAYVPQSSWIQT-GTIRENILFGKDM------------RQ---SFYEEVLEGCALNQDIEMWADGDLSVVGER 717 (1470)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~eNI~~g~~~------------~~---~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~ 717 (1470)
.++|++|++.++. .|++||+.++... .. ++.+++++..++. ...+.+
T Consensus 73 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~ 141 (241)
T cd03256 73 LRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLL-----------DKAYQR 141 (241)
T ss_pred HHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCCh-----------hhhCCC
Confidence 3799999987765 7999999875321 11 1222233333332 224567
Q ss_pred CCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhh-hcCEEEEEeC
Q 000475 718 GINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLD-AADLVLVMKD 794 (1470)
Q Consensus 718 g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~-~~d~i~~l~~ 794 (1470)
+.+||||||||++||||++.+|+++||||||++||+.+...+.+. +..+. .++|+|++||+++.+. .||+|++|++
T Consensus 142 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~ 220 (241)
T cd03256 142 ADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDL-LKRINREEGITVIVSLHQVDLAREYADRIVGLKD 220 (241)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 789999999999999999999999999999999999998888764 44443 3799999999999987 5999999999
Q ss_pred CEEEEecChhhHH
Q 000475 795 GKIEQSGKYEDLI 807 (1470)
Q Consensus 795 G~i~~~g~~~~l~ 807 (1470)
|++++.|+++++.
T Consensus 221 G~i~~~~~~~~~~ 233 (241)
T cd03256 221 GRIVFDGPPAELT 233 (241)
T ss_pred CEEEeecCHHHhh
Confidence 9999999988763
No 425
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-34 Score=314.96 Aligned_cols=216 Identities=29% Similarity=0.409 Sum_probs=173.2
Q ss_pred cEEEeeeEEEeCCCccc--------------c--CCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCC
Q 000475 590 AIDIEAGEYAWDAREEN--------------F--KKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISG 652 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~--------------~--~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G 652 (1470)
.|+++|++.-+..+... + ......++| ||+++.||+.+|.|-+|||||||++++.++++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 57788877666543210 0 012234667 999999999999999999999999999999999999
Q ss_pred cEEEECCE-----------------eEEEcCCCC-CCCccHHHHHhcCCCCC----HHH---HHHHHHHhcchHHHHhcc
Q 000475 653 AAIKVHGK-----------------KAYVPQSSW-IQTGTIRENILFGKDMR----QSF---YEEVLEGCALNQDIEMWA 707 (1470)
Q Consensus 653 ~~i~~~g~-----------------~ayv~Q~~~-i~~~Ti~eNI~~g~~~~----~~~---y~~v~~~~~l~~d~~~l~ 707 (1470)
++ .++|. +++|+|+.- ++..||.||+.||.+.. +++ -.+.++..+|+..-.
T Consensus 84 ~i-lv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~--- 159 (386)
T COG4175 84 EI-LVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYAD--- 159 (386)
T ss_pred eE-EECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhh---
Confidence 97 78773 599999965 46789999999997642 333 344555666654433
Q ss_pred CCCcccccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEcCCcchh-hh
Q 000475 708 DGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLS-QKTVLYTTHQLEFL-DA 785 (1470)
Q Consensus 708 ~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l-~~ 785 (1470)
..+.+||||+||||.|||||..||||+|+|||||||||-.+.++-++++.-..+ +||+|+||||+++. ..
T Consensus 160 --------~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlri 231 (386)
T COG4175 160 --------KYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRI 231 (386)
T ss_pred --------cCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhc
Confidence 345689999999999999999999999999999999999988887776643322 79999999999885 56
Q ss_pred cCEEEEEeCCEEEEecChhhHHhhchhHHHHH
Q 000475 786 ADLVLVMKDGKIEQSGKYEDLIADQNSELVRQ 817 (1470)
Q Consensus 786 ~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 817 (1470)
.|||..|+||+|++.|+++|+..++..++...
T Consensus 232 G~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~~ 263 (386)
T COG4175 232 GDRIAIMKDGEIVQVGTPEEILLNPANDYVRD 263 (386)
T ss_pred cceEEEecCCeEEEeCCHHHHHcCccHHHHHH
Confidence 99999999999999999999998666665443
No 426
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.8e-34 Score=317.02 Aligned_cols=190 Identities=26% Similarity=0.363 Sum_probs=158.6
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|..+|++|++ .++|
T Consensus 1 l~~~~l~~~~~~--------~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 71 (208)
T cd03268 1 LKTNDLTKTYGK--------KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEI-TFDGKSYQKNIEAL 71 (208)
T ss_pred CEEEEEEEEECC--------eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEE-EECCCcccchHHHH
Confidence 468899999953 357889 99999999999999999999999999999999999986 6665
Q ss_pred -EeEEEcCCCCCC-CccHHHHHhcCCC---CCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHH
Q 000475 660 -KKAYVPQSSWIQ-TGTIRENILFGKD---MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARA 734 (1470)
Q Consensus 660 -~~ayv~Q~~~i~-~~Ti~eNI~~g~~---~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARA 734 (1470)
.++|++|++.++ +.|++||+.++.. .++++.+++++..++.+.. .....+|||||||||+||||
T Consensus 72 ~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~a 140 (208)
T cd03268 72 RRIGALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSA-----------KKKVKGFSLGMKQRLGIALA 140 (208)
T ss_pred hhEEEecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHH-----------hhhHhhCCHHHHHHHHHHHH
Confidence 379999998876 5799999987532 2344555666666654332 34567899999999999999
Q ss_pred HccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000475 735 VYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 735 l~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 801 (1470)
++.+|+++||||||++||+.+...+.+ ++.... +++|+|++||+++++.. ||++++|++|++++.|
T Consensus 141 l~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 141 LLGNPDLLILDEPTNGLDPDGIKELRE-LILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred HhcCCCEEEECCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999888765 444433 57999999999999875 9999999999998754
No 427
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.9e-34 Score=319.83 Aligned_cols=197 Identities=25% Similarity=0.438 Sum_probs=162.2
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE---------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK--------- 660 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~--------- 660 (1470)
++++|+++.|+.. ..+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|.
T Consensus 1 l~~~~l~~~~~~~------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 73 (220)
T cd03263 1 LQIRNLTKTYKKG------TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTA-YINGYSIRTDRKAA 73 (220)
T ss_pred CEEEeeEEEeCCC------CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEE-EECCEecccchHHH
Confidence 4688999999642 1457899 99999999999999999999999999999999999986 66653
Q ss_pred ---eEEEcCCCCCC-CccHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHH
Q 000475 661 ---KAYVPQSSWIQ-TGTIRENILFGKD---MR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1470)
Q Consensus 661 ---~ayv~Q~~~i~-~~Ti~eNI~~g~~---~~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 729 (1470)
++|++|++.++ +.|++||+.++.. .. .++.+++++.+++.+. .+....+||||||||+
T Consensus 74 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv 142 (220)
T cd03263 74 RQSLGYCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDK-----------ANKRARTLSGGMKRKL 142 (220)
T ss_pred hhhEEEecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhChhhhCCHHHHHHH
Confidence 69999998876 6799999987531 11 1334455555555432 2345678999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhhH
Q 000475 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDL 806 (1470)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 806 (1470)
+||||++.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 143 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 143 SLAIALIGGPSVLLLDEPTSGLDPASRRAIWD-LILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHHHHHhcCCCEEEECCCCCCCCHHHHHHHHH-HHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999887765 45555557999999999999875 999999999999999987664
No 428
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=339.35 Aligned_cols=202 Identities=25% Similarity=0.362 Sum_probs=164.8
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+... ...+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 2 i~i~~l~~~y~~~~----~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I-~~~g~~i~~~~~~~ 76 (343)
T PRK11153 2 IELKNISKVFPQGG----RTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRV-LVDGQDLTALSEKE 76 (343)
T ss_pred EEEEeEEEEeCCCC----CceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEE-EECCEECCcCCHHH
Confidence 68899999997320 12467899 99999999999999999999999999999999999986 6654
Q ss_pred ------EeEEEcCCCCCCC-ccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 660 ------KKAYVPQSSWIQT-GTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
.++|++|++.++. .|++||+.++.. .+. ++.++.++..++.+ .......+|||||
T Consensus 77 ~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LSgGq 145 (343)
T PRK11153 77 LRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSD-----------KADRYPAQLSGGQ 145 (343)
T ss_pred HHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------hhhCChhhCCHHH
Confidence 3799999998765 799999998632 222 12233344444332 2345667999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecC
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~ 802 (1470)
|||++|||||+.+|+++||||||++||+.+...+.+ ++..+. .++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 146 ~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~-~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~ 224 (343)
T PRK11153 146 KQRVAIARALASNPKVLLCDEATSALDPATTRSILE-LLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGT 224 (343)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcC
Confidence 999999999999999999999999999999888875 444443 37899999999999875 99999999999999999
Q ss_pred hhhHHhh
Q 000475 803 YEDLIAD 809 (1470)
Q Consensus 803 ~~~l~~~ 809 (1470)
.+++...
T Consensus 225 ~~~~~~~ 231 (343)
T PRK11153 225 VSEVFSH 231 (343)
T ss_pred HHHHHhC
Confidence 9998763
No 429
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3e-34 Score=317.83 Aligned_cols=186 Identities=32% Similarity=0.472 Sum_probs=154.5
Q ss_pred EeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------Ee
Q 000475 593 IEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG----------KK 661 (1470)
Q Consensus 593 ~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g----------~~ 661 (1470)
++|++++|+.. .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++| .+
T Consensus 2 ~~~l~~~~~~~-------~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~~~i 73 (205)
T cd03226 2 IENISFSYKKG-------TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSI-LLNGKPIKAKERRKSI 73 (205)
T ss_pred cccEEEEeCCc-------CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEE-EECCEEhhhHHhhcce
Confidence 57888888631 357888 99999999999999999999999999999999999986 6766 47
Q ss_pred EEEcCCC--CCCCccHHHHHhcCCCC---CHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHc
Q 000475 662 AYVPQSS--WIQTGTIRENILFGKDM---RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVY 736 (1470)
Q Consensus 662 ayv~Q~~--~i~~~Ti~eNI~~g~~~---~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~ 736 (1470)
+|++|+| .+++.|++||+.++.+. ++++.+++++.+++.+.. .....+||||||||++||||++
T Consensus 74 ~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~laral~ 142 (205)
T cd03226 74 GYVMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALK-----------ERHPLSLSGGQKQRLAIAAALL 142 (205)
T ss_pred EEEecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhc-----------CCCchhCCHHHHHHHHHHHHHH
Confidence 9999997 46678999999986432 234556666766664332 3455689999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEEE
Q 000475 737 SNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1470)
Q Consensus 737 ~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~ 798 (1470)
.+|+++||||||++||+.+.+.+.+ .+..+ .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 143 ~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 143 SGKDLLIFDEPTSGLDYKNMERVGE-LIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred hCCCEEEEeCCCccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999887765 45544 457899999999999875 9999999999874
No 430
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.4e-34 Score=359.41 Aligned_cols=211 Identities=23% Similarity=0.374 Sum_probs=177.5
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEEcCEeCCCCCHHH-Hhcc
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP--SGGRILIDGVDISMIGLQD-LRSR 1296 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p--~~G~I~IDG~dI~~i~l~~-LR~~ 1296 (1470)
|+++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+... .|++
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999964 3599999999999999999999999999999999999987 7999999999998877655 4678
Q ss_pred cEEEccCCCCCcc-cHHHhcCcCCC-------CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1297 LSIIPQDPMLFQG-TVRTNLDPLEQ-------HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1297 isiIpQdp~LF~g-TIR~NLdp~~~-------~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
++|+||+|.+|.. |+++|+..... .. ++++.++++..++.+.. .+.++ ..||||||||
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~----~~LSgG~~qr 149 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN------VTRPV----GDYGGGQQQL 149 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc------ccCch----hhCCHHHHHH
Confidence 9999999988876 99999863211 11 12355566666553210 12333 4699999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
++|||||+++|+||+|||||++||+.+...+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|++++..
T Consensus 150 v~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (500)
T TIGR02633 150 VEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS 229 (500)
T ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC
Confidence 999999999999999999999999999999999998753 47899999999999976 9999999999999999887653
No 431
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.9e-34 Score=333.27 Aligned_cols=199 Identities=28% Similarity=0.427 Sum_probs=164.3
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1470)
..++++|++++|++ ...+++ ||++++||+++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 6 ~~i~i~~l~k~~~~--------~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v-~i~G~~~~~~~~ 76 (306)
T PRK13537 6 APIDFRNVEKRYGD--------KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSI-SLCGEPVPSRAR 76 (306)
T ss_pred ceEEEEeEEEEECC--------eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEE-EECCEecccchH
Confidence 46899999999963 357889 99999999999999999999999999999999999986 7765
Q ss_pred ----EeEEEcCCCCCC-CccHHHHHhcCCCC---CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHH
Q 000475 660 ----KKAYVPQSSWIQ-TGTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQ 727 (1470)
Q Consensus 660 ----~~ayv~Q~~~i~-~~Ti~eNI~~g~~~---~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 727 (1470)
.+|||||++.++ +.|++||+.|.... +. ++.+++++.+++... ...+..+|||||||
T Consensus 77 ~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~q 145 (306)
T PRK13537 77 HARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENK-----------ADAKVGELSGGMKR 145 (306)
T ss_pred HHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchH-----------hcCchhhCCHHHHH
Confidence 379999998876 47999999863221 11 222334444443321 23455689999999
Q ss_pred HHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhh
Q 000475 728 RIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYED 805 (1470)
Q Consensus 728 Rv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 805 (1470)
|++|||||.++|++++|||||++||+.+...+++ .+..+. +|+|+|++||++++++. ||+|++|++|++++.|++++
T Consensus 146 rl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~-~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~ 224 (306)
T PRK13537 146 RLTLARALVNDPDVLVLDEPTTGLDPQARHLMWE-RLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHA 224 (306)
T ss_pred HHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHH-HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999888776 455543 48999999999999876 99999999999999999998
Q ss_pred HHh
Q 000475 806 LIA 808 (1470)
Q Consensus 806 l~~ 808 (1470)
+.+
T Consensus 225 l~~ 227 (306)
T PRK13537 225 LIE 227 (306)
T ss_pred HHh
Confidence 865
No 432
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=6.7e-34 Score=362.57 Aligned_cols=199 Identities=28% Similarity=0.374 Sum_probs=170.4
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCC--CcEEEEcCEeCCCCCHHHHhcccEEEccCCCCCcc-c
Q 000475 1234 PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS--GGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQG-T 1310 (1470)
Q Consensus 1234 ~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~--~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~g-T 1310 (1470)
..+|+|+|+++++||++||+||||||||||+++|.|+.+|. +|+|.+||.++. ...+++++||||++.+|.. |
T Consensus 81 ~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~----~~~~~~i~yv~Q~~~l~~~lT 156 (659)
T PLN03211 81 RTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPT----KQILKRTGFVTQDDILYPHLT 156 (659)
T ss_pred CeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECc----hhhccceEEECcccccCCcCC
Confidence 45999999999999999999999999999999999999885 899999999874 2456789999999999965 9
Q ss_pred HHHhcCcC------CCCCHHH----HHHHHHHcCcHHHHHhcccccCccccCC-CCCCChhHHHHHHHHHHHccCCCEEE
Q 000475 1311 VRTNLDPL------EQHSDQE----IWEVINKCHLAEIVRQDQRLLDAPVAED-GENWSVGQRQLVCLARVLLKKKRILV 1379 (1470)
Q Consensus 1311 IR~NLdp~------~~~sd~e----I~~aL~~~~L~~~v~~lp~gLdt~v~e~-G~nLSgGQrQrl~LARALLr~~~ILl 1379 (1470)
+|||+... ...++++ +.+.++..+|.+ ..||.+++. ...||||||||++|||||+++|+||+
T Consensus 157 V~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~-------~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLl 229 (659)
T PLN03211 157 VRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTK-------CENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLI 229 (659)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChh-------hcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEE
Confidence 99999631 1234433 445556665543 457888653 67899999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhh-h-hhcCEEEEEeCCEEEEecChhHHhh
Q 000475 1380 LDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPT-V-IDNDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1380 LDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~t-i-~~~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
|||||++||+.+...+.+.|++.. +++|||+++|+++. + ..||+|++|++|++++.|+++++.+
T Consensus 230 LDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~ 296 (659)
T PLN03211 230 LDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMA 296 (659)
T ss_pred EeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHH
Confidence 999999999999999999999864 58999999999984 5 4599999999999999999998864
No 433
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.7e-34 Score=320.29 Aligned_cols=190 Identities=31% Similarity=0.431 Sum_probs=153.6
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+..+ ...+.+++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~~~----~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i-~~~g~~~~~~~~~~ 75 (218)
T cd03255 1 IELKNLSKTYGGGG----EKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEV-RVDGTDISKLSEKE 75 (218)
T ss_pred CeEeeeEEEecCCC----cceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeE-EECCEehhhcchhH
Confidence 46889999996420 11467889 99999999999999999999999999999999999986 5543
Q ss_pred -------EeEEEcCCCCCCCc-cHHHHHhcCCCC---C----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchH
Q 000475 660 -------KKAYVPQSSWIQTG-TIRENILFGKDM---R----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1470)
Q Consensus 660 -------~~ayv~Q~~~i~~~-Ti~eNI~~g~~~---~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 724 (1470)
.++|++|++.++.. |++||+.++... + +++.+++++..++.+ ..+....+||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G 144 (218)
T cd03255 76 LAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGD-----------RLNHYPSELSGG 144 (218)
T ss_pred HHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCch-----------hhhcChhhcCHH
Confidence 47999999988764 999999986432 1 123344444444432 234566799999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhhcCEEEEEeCCEE
Q 000475 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDAADLVLVMKDGKI 797 (1470)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~~d~i~~l~~G~i 797 (1470)
||||++||||++.+|+++||||||++||+.+...+.+ ++..+. .++|+|++||+++++..||+|++|++|++
T Consensus 145 ~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 145 QQQRVAIARALANDPKIILADEPTGNLDSETGKEVME-LLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 9999999999999999999999999999999877765 455543 37899999999998878999999999974
No 434
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=5.6e-34 Score=317.67 Aligned_cols=187 Identities=33% Similarity=0.502 Sum_probs=152.3
Q ss_pred EeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE--------eEE
Q 000475 593 IEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK--------KAY 663 (1470)
Q Consensus 593 ~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~--------~ay 663 (1470)
++|++++|+. .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|. ++|
T Consensus 2 ~~~l~~~~~~--------~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i-~~~g~~~~~~~~~i~~ 72 (213)
T cd03235 2 VEDLTVSYGG--------HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSI-RVFGKPLEKERKRIGY 72 (213)
T ss_pred cccceeEECC--------EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEE-EECCccHHHHHhheEE
Confidence 5788888853 357888 99999999999999999999999999999999999997 77763 899
Q ss_pred EcCCCCC---CCccHHHHHhcCCCC-----------CHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHH
Q 000475 664 VPQSSWI---QTGTIRENILFGKDM-----------RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1470)
Q Consensus 664 v~Q~~~i---~~~Ti~eNI~~g~~~-----------~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 729 (1470)
++|++.+ ++.|++||+.++... .+++.+++++.+++.+.. .....+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELA-----------DRQIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHH-----------hCCcccCCHHHHHHH
Confidence 9999875 457999999886431 123344555555554332 245678999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000475 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 801 (1470)
+||||+..+|+++||||||++||+.+...+.+. +..+. +++|+|++||+++++.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYEL-LRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 999999999999999999999999998887664 44433 57899999999999875 9999999986 44443
No 435
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=323.85 Aligned_cols=203 Identities=26% Similarity=0.364 Sum_probs=166.7
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCc-----CCCCcEEEECC---
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKVHG--- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~~g--- 659 (1470)
..++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|.++ |++|++ .++|
T Consensus 12 ~~l~~~~l~~~~~~--------~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i-~~~g~~~ 82 (260)
T PRK10744 12 SKIQVRNLNFYYGK--------FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEI-LLDGENI 82 (260)
T ss_pred ceEEEEEEEEEeCC--------eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEE-EECCEEc
Confidence 45899999999963 257889 99999999999999999999999999999986 478986 5543
Q ss_pred ------------EeEEEcCCCCCCCccHHHHHhcCCC----CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCC
Q 000475 660 ------------KKAYVPQSSWIQTGTIRENILFGKD----MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGI 719 (1470)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~eNI~~g~~----~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~ 719 (1470)
.++|++|++.++..|++||+.++.. .+. ++.+++++..++..++. ...++...
T Consensus 83 ~~~~~~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~ 155 (260)
T PRK10744 83 LTPKQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGY 155 (260)
T ss_pred cccccchHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCC
Confidence 3789999998888999999998632 222 23344455555433222 23456788
Q ss_pred CCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEE
Q 000475 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1470)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~ 798 (1470)
+||||||||++||||++.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 156 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 234 (260)
T PRK10744 156 SLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEE-LITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELI 234 (260)
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999998877765 45555567899999999999865 9999999999999
Q ss_pred EecChhhHHh
Q 000475 799 QSGKYEDLIA 808 (1470)
Q Consensus 799 ~~g~~~~l~~ 808 (1470)
+.|+.+++..
T Consensus 235 ~~g~~~~~~~ 244 (260)
T PRK10744 235 EFGNTDTIFT 244 (260)
T ss_pred EeCCHHHHHh
Confidence 9999988865
No 436
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=8.7e-34 Score=320.44 Aligned_cols=197 Identities=26% Similarity=0.401 Sum_probs=160.0
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+. ...+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~~ 71 (232)
T cd03218 1 LRAENLSKRYGK--------RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKI-LLDGQDITKLPMHK 71 (232)
T ss_pred CeEEEEEEEeCC--------EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEE-EECCEecccCCHhH
Confidence 468899999963 357888 99999999999999999999999999999999999986 5654
Q ss_pred ----EeEEEcCCCCCCCc-cHHHHHhcCCCC---CHH----HHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHH
Q 000475 660 ----KKAYVPQSSWIQTG-TIRENILFGKDM---RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQ 727 (1470)
Q Consensus 660 ----~~ayv~Q~~~i~~~-Ti~eNI~~g~~~---~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 727 (1470)
.++|++|++.++.. |++||+.++.+. ... +.++.++..++. ...+....+|||||||
T Consensus 72 ~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~q 140 (232)
T cd03218 72 RARLGIGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHIT-----------HLRKSKASSLSGGERR 140 (232)
T ss_pred HHhccEEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------hhhhCChhhCCHHHHH
Confidence 27999999987764 999999875321 111 122233333322 2345667899999999
Q ss_pred HHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhh
Q 000475 728 RIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYED 805 (1470)
Q Consensus 728 Rv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 805 (1470)
|++||||++.+|+++||||||++||+.+...+.+ +++.+. +++|+|++||+++.+.. ||+|++|++|++.+.|+.++
T Consensus 141 rl~la~al~~~p~llllDEPt~~LD~~~~~~~~~-~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 219 (232)
T cd03218 141 RVEIARALATNPKFLLLDEPFAGVDPIAVQDIQK-IIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEE 219 (232)
T ss_pred HHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHH
Confidence 9999999999999999999999999999887765 444443 47899999999988765 99999999999999999887
Q ss_pred HHh
Q 000475 806 LIA 808 (1470)
Q Consensus 806 l~~ 808 (1470)
+..
T Consensus 220 ~~~ 222 (232)
T cd03218 220 IAA 222 (232)
T ss_pred hhc
Confidence 754
No 437
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=8.3e-34 Score=318.41 Aligned_cols=197 Identities=26% Similarity=0.430 Sum_probs=158.8
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+. .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 71 (222)
T cd03224 1 LEVENLNAGYGK--------SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSI-RFDGRDITGLPPHE 71 (222)
T ss_pred CEEeeEEeecCC--------eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEEcCCCCHHH
Confidence 468899999863 257888 99999999999999999999999999999999999986 6654
Q ss_pred ----EeEEEcCCCCCCCc-cHHHHHhcCCCCC--H---HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHH
Q 000475 660 ----KKAYVPQSSWIQTG-TIRENILFGKDMR--Q---SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1470)
Q Consensus 660 ----~~ayv~Q~~~i~~~-Ti~eNI~~g~~~~--~---~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 729 (1470)
.++|++|++.++.. |++||+.++.... . ++.+++++.. ..+ ....+.+..+||||||||+
T Consensus 72 ~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~------~~l----~~~~~~~~~~LS~G~~qrv 141 (222)
T cd03224 72 RARAGIGYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELF------PRL----KERRKQLAGTLSGGEQQML 141 (222)
T ss_pred HHhcCeEEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHH------Hhh----hhhhhCchhhCCHHHHHHH
Confidence 27999999987764 9999999875322 1 1112222222 111 1223467789999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhhHH
Q 000475 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLI 807 (1470)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 807 (1470)
+||||+..+|+++||||||++||+.+...+.+ ++..+. +++|+|++||+++.+.. ||+|++|++|++.+.|+.+++.
T Consensus 142 ~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 142 AIARALMSRPKLLLLDEPSEGLAPKIVEEIFE-AIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHHHHHhcCCCEEEECCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 99999999999999999999999999887765 454443 57899999999998765 9999999999999999877764
No 438
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=327.35 Aligned_cols=201 Identities=27% Similarity=0.410 Sum_probs=167.7
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1470)
..++++|++++|+.. ..+.+++ ||++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 4 ~~l~~~~l~~~~~~~------~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i-~~~g~~i~~~~~ 76 (279)
T PRK13635 4 EIIRVEHISFRYPDA------ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTI-TVGGMVLSEETV 76 (279)
T ss_pred ceEEEEEEEEEeCCC------CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEE-EECCEECCcCcH
Confidence 358999999999642 2457889 99999999999999999999999999999999999986 6766
Q ss_pred -----EeEEEcCCC--CCCCccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 660 -----KKAYVPQSS--WIQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 660 -----~~ayv~Q~~--~i~~~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
.++|++|+| .+++.|++|||.++.. ... ++.+++++.++|...++ ....+|||||
T Consensus 77 ~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LS~G~ 145 (279)
T PRK13635 77 WDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLN-----------REPHRLSGGQ 145 (279)
T ss_pred HHHhhheEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhh-----------CCcccCCHHH
Confidence 369999998 4667899999998632 121 23455556666654433 4556899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhhhcCEEEEEeCCEEEEecCh
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKY 803 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~ 803 (1470)
|||++||||++.+|+++||||||++||+.+...+++ ++..+. + ++|+|++||+++.+..||+|++|++|++++.|+.
T Consensus 146 ~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~-~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~ 224 (279)
T PRK13635 146 KQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLE-TVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTP 224 (279)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999888876 455443 3 7899999999999888999999999999999998
Q ss_pred hhHHh
Q 000475 804 EDLIA 808 (1470)
Q Consensus 804 ~~l~~ 808 (1470)
+++..
T Consensus 225 ~~~~~ 229 (279)
T PRK13635 225 EEIFK 229 (279)
T ss_pred HHHhc
Confidence 88765
No 439
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=322.72 Aligned_cols=195 Identities=28% Similarity=0.345 Sum_probs=162.1
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1470)
..++++|++++|+. ...+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 11 ~~l~i~~l~~~~~~--------~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i-~~~g~~~~~~~~ 81 (257)
T PRK11247 11 TPLLLNAVSKRYGE--------RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGEL-LAGTAPLAEARE 81 (257)
T ss_pred CcEEEEEEEEEECC--------cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEE-EECCEEHHHhhC
Confidence 45899999999963 357888 99999999999999999999999999999999999987 6665
Q ss_pred EeEEEcCCCCCCC-ccHHHHHhcCCCC-CHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHcc
Q 000475 660 KKAYVPQSSWIQT-GTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYS 737 (1470)
Q Consensus 660 ~~ayv~Q~~~i~~-~Ti~eNI~~g~~~-~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~ 737 (1470)
.++|++|++.++. .|++||+.++... .+++.+++++..++.+. .+.+..+||||||||++||||++.
T Consensus 82 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGqkqrl~laraL~~ 150 (257)
T PRK11247 82 DTRLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADR-----------ANEWPAALSGGQKQRVALARALIH 150 (257)
T ss_pred ceEEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhH-----------hcCChhhCCHHHHHHHHHHHHHhc
Confidence 3799999988765 7999999986421 23344555555555432 345678999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-c-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChh
Q 000475 738 NSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-L-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYE 804 (1470)
Q Consensus 738 ~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 804 (1470)
+|+++||||||++||+.+...+.+ ++..+ . .++|+|++||+++++.. ||+|++|++|++++.|+.+
T Consensus 151 ~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 151 RPGLLLLDEPLGALDALTRIEMQD-LIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999999999887765 44443 2 37899999999999765 9999999999999887654
No 440
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=326.86 Aligned_cols=198 Identities=30% Similarity=0.433 Sum_probs=163.9
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+.+ ...+++ ||++++||+++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 2 l~~~~l~~~~~~~-------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~~ 73 (274)
T PRK13644 2 IRLENVSYSYPDG-------TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKV-LVSGIDTGDFSKLQ 73 (274)
T ss_pred EEEEEEEEEcCCC-------CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-EECCEECCccccHH
Confidence 6789999999632 347899 99999999999999999999999999999999999986 5654
Q ss_pred ----EeEEEcCCCC--CCCccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHH
Q 000475 660 ----KKAYVPQSSW--IQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1470)
Q Consensus 660 ----~~ayv~Q~~~--i~~~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 726 (1470)
.++|++|+|. +++.|++|||.++.. .+. ++.+++++.+++... .+..+..||||||
T Consensus 74 ~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~ 142 (274)
T PRK13644 74 GIRKLVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKY-----------RHRSPKTLSGGQG 142 (274)
T ss_pred HHHhheEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHH-----------hcCCcccCCHHHH
Confidence 2699999986 467899999998642 122 223444444444322 3456679999999
Q ss_pred HHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhh
Q 000475 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYED 805 (1470)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~ 805 (1470)
||++||||++.+|+++||||||++||+.+...+++. ++.+ .+++|+|++||+++.++.||+|++|++|++++.|+.++
T Consensus 143 qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~ 221 (274)
T PRK13644 143 QCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLER-IKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPEN 221 (274)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999998887764 4443 34899999999999987899999999999999999888
Q ss_pred HHh
Q 000475 806 LIA 808 (1470)
Q Consensus 806 l~~ 808 (1470)
+..
T Consensus 222 ~~~ 224 (274)
T PRK13644 222 VLS 224 (274)
T ss_pred Hhc
Confidence 765
No 441
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=6.5e-34 Score=317.16 Aligned_cols=190 Identities=31% Similarity=0.434 Sum_probs=155.1
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 1 i~~~~l~~~~~~--------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v-~~~g~~~~~~~~~~ 71 (213)
T cd03301 1 VELENVTKRFGN--------VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRI-YIGGRDVTDLPPKD 71 (213)
T ss_pred CEEEeeEEEECC--------eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEECCcCCccc
Confidence 468899999963 257888 99999999999999999999999999999999999986 6655
Q ss_pred -EeEEEcCCCCCCC-ccHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHH
Q 000475 660 -KKAYVPQSSWIQT-GTIRENILFGKD---MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQ 730 (1470)
Q Consensus 660 -~~ayv~Q~~~i~~-~Ti~eNI~~g~~---~~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 730 (1470)
.++|++|++.++. .|++||+.++.. ...+ +.+++++..++.+ .......+||||||||++
T Consensus 72 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qr~~ 140 (213)
T cd03301 72 RDIAMVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEH-----------LLDRKPKQLSGGQRQRVA 140 (213)
T ss_pred ceEEEEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHH-----------HHhCChhhCCHHHHHHHH
Confidence 3799999998874 699999987632 1221 2233344444432 234566799999999999
Q ss_pred HHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000475 731 LARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 731 LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 801 (1470)
||||++.+|+++||||||++||+++...+.+ +++.+. .++|+|++||+++++.. ||+|++|++|++++.|
T Consensus 141 laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 141 LGRAIVREPKVFLMDEPLSNLDAKLRVQMRA-ELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999999888776 454443 37899999999998875 9999999999998765
No 442
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=3.3e-34 Score=321.47 Aligned_cols=186 Identities=24% Similarity=0.440 Sum_probs=159.9
Q ss_pred EEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEEEccCCCC---CcccHHHhcCcC
Q 000475 1242 CTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPML---FQGTVRTNLDPL 1318 (1470)
Q Consensus 1242 ~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~L---F~gTIR~NLdp~ 1318 (1470)
|+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++. +.|++++|+||+|.+ |+.|+++|+...
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~-----~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~ 75 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPPAKGTVKVAGASPG-----KGWRHIGYVPQRHEFAWDFPISVAHTVMSG 75 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCccch-----HhhCcEEEecccccccCCCCccHHHHHHhc
Confidence 578999999999999999999999999999999999999999864 357889999999976 457999998532
Q ss_pred --------CC---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCC
Q 000475 1319 --------EQ---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASI 1387 (1470)
Q Consensus 1319 --------~~---~sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTssl 1387 (1470)
.. ..++++.++++.+++.++. ++.+ ..||+|||||++|||||+++|++|+|||||++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrv~laral~~~p~llilDEP~~~L 144 (223)
T TIGR03771 76 RTGHIGWLRRPCVADFAAVRDALRRVGLTELA-------DRPV----GELSGGQRQRVLVARALATRPSVLLLDEPFTGL 144 (223)
T ss_pred cccccccccCCcHHHHHHHHHHHHHhCCchhh-------cCCh----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 11 1234577888888886543 3333 359999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1388 DTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1388 D~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
|+.+...+.+.|++.. ++.|+|+++|+++.+.+ ||+|+++ +|++++.|+++++.++
T Consensus 145 D~~~~~~l~~~l~~~~~~~~tvii~sH~~~~~~~~~d~i~~l-~G~i~~~~~~~~~~~~ 202 (223)
T TIGR03771 145 DMPTQELLTELFIELAGAGTAILMTTHDLAQAMATCDRVVLL-NGRVIADGTPQQLQDP 202 (223)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHHhcCh
Confidence 9999999999998764 47899999999998876 9999999 7999999999998763
No 443
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.1e-33 Score=320.34 Aligned_cols=197 Identities=22% Similarity=0.396 Sum_probs=162.5
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|..+|++|++ .++|
T Consensus 2 l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i-~~~g~~i~~~~~~~ 72 (236)
T TIGR03864 2 LEVAGLSFAYGA--------RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQI-SVAGHDLRRAPRAA 72 (236)
T ss_pred EEEEeeEEEECC--------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEE-EECCEEcccCChhh
Confidence 678999999963 357889 99999999999999999999999999999999999986 6655
Q ss_pred --EeEEEcCCCCC-CCccHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHH
Q 000475 660 --KKAYVPQSSWI-QTGTIRENILFGKD---MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1470)
Q Consensus 660 --~~ayv~Q~~~i-~~~Ti~eNI~~g~~---~~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 729 (1470)
.++|++|++.+ +..|++||+.++.. .... +.++.++..++. ...+.+..+||||||||+
T Consensus 73 ~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrl 141 (236)
T TIGR03864 73 LARLGVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLA-----------ERADDKVRELNGGHRRRV 141 (236)
T ss_pred hhhEEEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------hhhcCChhhCCHHHHHHH
Confidence 37999999877 56899999987532 1111 122233333332 234567789999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhhHH
Q 000475 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLI 807 (1470)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 807 (1470)
+||||++.+|+++||||||++||+.+...+.+ .+..+. +++|+|++||+++++..||+|++|++|++++.|+.+++.
T Consensus 142 ~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (236)
T TIGR03864 142 EIARALLHRPALLLLDEPTVGLDPASRAAIVA-HVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELR 220 (236)
T ss_pred HHHHHHhcCCCEEEEcCCccCCCHHHHHHHHH-HHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 99999999999999999999999999888876 454443 479999999999998889999999999999999988876
Q ss_pred h
Q 000475 808 A 808 (1470)
Q Consensus 808 ~ 808 (1470)
+
T Consensus 221 ~ 221 (236)
T TIGR03864 221 G 221 (236)
T ss_pred H
Confidence 5
No 444
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-34 Score=327.75 Aligned_cols=185 Identities=33% Similarity=0.452 Sum_probs=153.2
Q ss_pred cccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC-----------------EeEEEcCCCCCC-
Q 000475 611 TIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-----------------KKAYVPQSSWIQ- 671 (1470)
Q Consensus 611 ~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-----------------~~ayv~Q~~~i~- 671 (1470)
...+++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++| .++|++|++.++
T Consensus 37 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i-~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 115 (269)
T cd03294 37 TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKV-LIDGQDIAAMSRKELRELRRKKISMVFQSFALLP 115 (269)
T ss_pred ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEE-EECCEEccccChhhhhhhhcCcEEEEecCcccCC
Confidence 346888 99999999999999999999999999999999999986 5544 479999999887
Q ss_pred CccHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHccCCCEEEE
Q 000475 672 TGTIRENILFGKD---MR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIF 744 (1470)
Q Consensus 672 ~~Ti~eNI~~g~~---~~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lL 744 (1470)
+.|++||+.++.. .+ .++.+++++.+++.+.+ .....+||||||||++||||++.+|+++||
T Consensus 116 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 116 HRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWE-----------HKYPDELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred CCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHh-----------hCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 5799999987532 11 12344455555554333 345568999999999999999999999999
Q ss_pred eCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhhHHh
Q 000475 745 DDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLIA 808 (1470)
Q Consensus 745 Dep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 808 (1470)
||||++||+.+...+.+ ++..+. .++|+|++||+++.+.. ||++++|++|++++.|+.+++.+
T Consensus 185 DEPt~~LD~~~~~~l~~-~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 185 DEAFSALDPLIRREMQD-ELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred cCCCccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999887765 454442 37999999999998765 99999999999999999988865
No 445
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-33 Score=319.94 Aligned_cols=201 Identities=28% Similarity=0.402 Sum_probs=161.7
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+... ...+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 2 i~~~~l~~~~~~~~----~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~~ 76 (233)
T cd03258 2 IELKNVSKVFGDTG----GKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSV-LVDGTDLTLLSGKE 76 (233)
T ss_pred eEEecceEEccCCC----CceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEEcccCCHHH
Confidence 67899999996420 11267899 99999999999999999999999999999999999986 5554
Q ss_pred ------EeEEEcCCCCCCC-ccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 660 ------KKAYVPQSSWIQT-GTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
.++|++|++.++. .|++||+.++.. .+. ++.++.++..++.+ .......+|||||
T Consensus 77 ~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~ 145 (233)
T cd03258 77 LRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLED-----------KADAYPAQLSGGQ 145 (233)
T ss_pred HHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChh-----------hhhcChhhCCHHH
Confidence 3799999998875 699999987532 121 12233333333322 2345667999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecC
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~ 802 (1470)
|||++||||+..+|+++||||||++||+.+...+.+ ++..+. + ++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 146 ~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 224 (233)
T cd03258 146 KQRVGIARALANNPKVLLCDEATSALDPETTQSILA-LLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGT 224 (233)
T ss_pred HHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecC
Confidence 999999999999999999999999999999887765 454443 3 7899999999999865 99999999999999998
Q ss_pred hhhHHh
Q 000475 803 YEDLIA 808 (1470)
Q Consensus 803 ~~~l~~ 808 (1470)
.+++.+
T Consensus 225 ~~~~~~ 230 (233)
T cd03258 225 VEEVFA 230 (233)
T ss_pred HHHHhc
Confidence 877654
No 446
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=100.00 E-value=8.5e-34 Score=363.76 Aligned_cols=213 Identities=24% Similarity=0.363 Sum_probs=185.8
Q ss_pred cEEEEeEEEEeCCC--CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHH---
Q 000475 1219 KIELENLLVQYNPT--LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL--- 1293 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~--~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L--- 1293 (1470)
.++++|++++|+.+ .+++|+|+||+|++||+++|+|++|||||||+++|.|+++|++|+|.+||.++...+.+++
T Consensus 4 ~l~~~nl~~~y~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 83 (648)
T PRK10535 4 LLELKDIRRSYPSGEEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGQDVATLDADALAQL 83 (648)
T ss_pred EEEEeeEEEEeCCCCCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEcCcCCHHHHHHH
Confidence 48999999999643 2469999999999999999999999999999999999999999999999999999887664
Q ss_pred -hcccEEEccCCCCCcc-cHHHhcCcC----CCC---CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000475 1294 -RSRLSIIPQDPMLFQG-TVRTNLDPL----EQH---SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1364 (1470)
Q Consensus 1294 -R~~isiIpQdp~LF~g-TIR~NLdp~----~~~---sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQr 1364 (1470)
|++++|+||+|.+|++ |+.+|++.. +.. .++++.+.++.+++.+..... ..+||+||+||
T Consensus 84 ~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~lgl~~~~~~~-----------~~~LS~Gq~qr 152 (648)
T PRK10535 84 RREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRVEYQ-----------PSQLSGGQQQR 152 (648)
T ss_pred HhccEEEEeCCcccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhcCC-----------cccCCHHHHHH
Confidence 6789999999999975 999999631 111 133466777777776554333 34799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHh
Q 000475 1365 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLL 1442 (1470)
Q Consensus 1365 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~~DrIlvL~~G~vvE~g~p~~Ll 1442 (1470)
++|||||+++|++|+|||||++||.++.+.+.+.|++.. +++|+|+|+|+++.+..||++++|++|++++.|++++..
T Consensus 153 v~LAraL~~~P~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (648)
T PRK10535 153 VSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAQEKV 231 (648)
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHHHHHhCCEEEEEECCEEEeecCccccc
Confidence 999999999999999999999999999999999998764 479999999999998889999999999999999999876
No 447
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.2e-33 Score=331.20 Aligned_cols=199 Identities=31% Similarity=0.445 Sum_probs=162.8
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1470)
..++++|++++|+. ...+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 3 ~~i~~~~l~~~~~~--------~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~ 73 (303)
T TIGR01288 3 VAIDLVGVSKSYGD--------KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKI-TVLGEPVPSRAR 73 (303)
T ss_pred cEEEEEeEEEEeCC--------eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEECcccHH
Confidence 46899999999963 357889 99999999999999999999999999999999999986 6655
Q ss_pred ----EeEEEcCCCCCC-CccHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHH
Q 000475 660 ----KKAYVPQSSWIQ-TGTIRENILFGKD---MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQ 727 (1470)
Q Consensus 660 ----~~ayv~Q~~~i~-~~Ti~eNI~~g~~---~~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 727 (1470)
.++|++|++.++ ..|++||+.+... .+.. +.+++++.+++.+ ....+..+|||||||
T Consensus 74 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~-----------~~~~~~~~LSgG~~q 142 (303)
T TIGR01288 74 LARVAIGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-----------KADVRVALLSGGMKR 142 (303)
T ss_pred HHhhcEEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChh-----------HhcCchhhCCHHHHH
Confidence 379999998876 4799999975221 2221 2223344343322 223556789999999
Q ss_pred HHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhh
Q 000475 728 RIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYED 805 (1470)
Q Consensus 728 Rv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 805 (1470)
|++||||++.+|+++||||||++||+.+...+.+. +..+ .+++|+|++||+++++.. ||+|++|++|+++..|++++
T Consensus 143 rv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 221 (303)
T TIGR01288 143 RLTLARALINDPQLLILDEPTTGLDPHARHLIWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHA 221 (303)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 99999999999999999999999999998887764 4443 358999999999999875 99999999999999999988
Q ss_pred HHh
Q 000475 806 LIA 808 (1470)
Q Consensus 806 l~~ 808 (1470)
+..
T Consensus 222 ~~~ 224 (303)
T TIGR01288 222 LID 224 (303)
T ss_pred HHh
Confidence 764
No 448
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=327.92 Aligned_cols=199 Identities=24% Similarity=0.401 Sum_probs=166.2
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+.+ .+.+++ ||++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 5 ~l~~~~l~~~~~~~-------~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i-~i~g~~~~~~~~~ 76 (283)
T PRK13636 5 ILKVEELNYNYSDG-------THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRI-LFDGKPIDYSRKG 76 (283)
T ss_pred eEEEEeEEEEeCCC-------CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEE-EECCEECCCCcch
Confidence 58999999999632 357889 99999999999999999999999999999999999986 6665
Q ss_pred ------EeEEEcCCC--CCCCccHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchH
Q 000475 660 ------KKAYVPQSS--WIQTGTIRENILFGKD---MR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1470)
Q Consensus 660 ------~~ayv~Q~~--~i~~~Ti~eNI~~g~~---~~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 724 (1470)
.++|++|+| .+++.|++||+.++.. +. .++.+++++.+++... .+..+.+||||
T Consensus 77 ~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G 145 (283)
T PRK13636 77 LMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHL-----------KDKPTHCLSFG 145 (283)
T ss_pred HHHHHhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhCCcccCCHH
Confidence 269999998 5678899999987532 11 1234445555555432 24567899999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhh-hcCEEEEEeCCEEEEec
Q 000475 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g 801 (1470)
||||++|||||+.+|+++||||||++||+.+...+.+ ++..+. + ++|||++||+++++. .||+|++|++|++++.|
T Consensus 146 ~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g 224 (283)
T PRK13636 146 QKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMK-LLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQG 224 (283)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHH-HHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 9999999999999999999999999999999887765 454443 3 799999999999987 59999999999999999
Q ss_pred ChhhHHh
Q 000475 802 KYEDLIA 808 (1470)
Q Consensus 802 ~~~~l~~ 808 (1470)
+++++..
T Consensus 225 ~~~~~~~ 231 (283)
T PRK13636 225 NPKEVFA 231 (283)
T ss_pred CHHHHhc
Confidence 9988865
No 449
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=319.86 Aligned_cols=196 Identities=27% Similarity=0.345 Sum_probs=159.5
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+... ...+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 5 ~l~~~~l~~~~~~~~----~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~i~~~~~~ 79 (233)
T PRK11629 5 LLQCDNLCKRYQEGS----VQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDV-IFNGQPMSKLSSA 79 (233)
T ss_pred eEEEEeEEEEcCCCC----cceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEE-EECCEEcCcCCHH
Confidence 489999999997430 11467899 99999999999999999999999999999999999986 6654
Q ss_pred --------EeEEEcCCCCCCC-ccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCch
Q 000475 660 --------KKAYVPQSSWIQT-GTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1470)
Q Consensus 660 --------~~ayv~Q~~~i~~-~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 723 (1470)
.++|++|++.++. .|++||+.++.. .+. ++.+++++.+++.+ ..+....+|||
T Consensus 80 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSg 148 (233)
T PRK11629 80 AKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEH-----------RANHRPSELSG 148 (233)
T ss_pred HHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCch-----------hhhCChhhCCH
Confidence 3799999988765 599999987421 121 22344445444432 23456779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhhcCEEEEEeCCEEEEec
Q 000475 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g 801 (1470)
|||||++||||++.+|+++||||||++||+.+...+.+ .+..+. +++|+|++||+++++..+|++++|++|++++.+
T Consensus 149 G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~ 227 (233)
T PRK11629 149 GERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQ-LLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAEL 227 (233)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEe
Confidence 99999999999999999999999999999999887765 454442 479999999999999888999999999999876
Q ss_pred C
Q 000475 802 K 802 (1470)
Q Consensus 802 ~ 802 (1470)
+
T Consensus 228 ~ 228 (233)
T PRK11629 228 S 228 (233)
T ss_pred c
Confidence 5
No 450
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=328.65 Aligned_cols=204 Identities=24% Similarity=0.402 Sum_probs=164.7
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+.... ...+.+++ ||++++||+++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 2 ~i~~~~l~~~~~~~~~---~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~ 77 (287)
T PRK13641 2 SIKFENVDYIYSPGTP---MEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTI-TIAGYHITPETGN 77 (287)
T ss_pred EEEEEEEEEEcCCCCC---ccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE-EECCEECcccccc
Confidence 4789999999974200 01357899 99999999999999999999999999999999999986 6655
Q ss_pred --------EeEEEcCCC--CCCCccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCc
Q 000475 660 --------KKAYVPQSS--WIQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1470)
Q Consensus 660 --------~~ayv~Q~~--~i~~~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LS 722 (1470)
.++|++|+| .++..|++|||.++.. ... ++.+++++.+++..+. ...+..+||
T Consensus 78 ~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LS 147 (287)
T PRK13641 78 KNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDL----------ISKSPFELS 147 (287)
T ss_pred chHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH----------hhCCcccCC
Confidence 269999997 4667899999987632 221 2234445555543211 245678999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEe
Q 000475 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQS 800 (1470)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~ 800 (1470)
||||||++||||++.+|+++||||||++||+.+...+.+ ++..+. ++.|+|++||+++++.. ||+|++|++|++++.
T Consensus 148 gGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~-~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~ 226 (287)
T PRK13641 148 GGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQ-LFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKH 226 (287)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999998877765 455543 47899999999999865 999999999999999
Q ss_pred cChhhHHh
Q 000475 801 GKYEDLIA 808 (1470)
Q Consensus 801 g~~~~l~~ 808 (1470)
|+.+++..
T Consensus 227 g~~~~~~~ 234 (287)
T PRK13641 227 ASPKEIFS 234 (287)
T ss_pred CCHHHHhc
Confidence 99888764
No 451
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=323.52 Aligned_cols=207 Identities=23% Similarity=0.276 Sum_probs=169.7
Q ss_pred cEEEEeEEEEeCC------------------CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Q 000475 1219 KIELENLLVQYNP------------------TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILI 1280 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~------------------~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~I 1280 (1470)
.|+++||+..|+. ...++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~ 83 (264)
T PRK13546 4 SVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDR 83 (264)
T ss_pred eEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEE
Confidence 4778888877754 1236999999999999999999999999999999999999999999999
Q ss_pred cCEeCCCCCHHHHhcccEEEccCCCCCc-ccHHHhcCcC---CCCCHHHHH----HHHHHcCcHHHHHhcccccCccccC
Q 000475 1281 DGVDISMIGLQDLRSRLSIIPQDPMLFQ-GTVRTNLDPL---EQHSDQEIW----EVINKCHLAEIVRQDQRLLDAPVAE 1352 (1470)
Q Consensus 1281 DG~dI~~i~l~~LR~~isiIpQdp~LF~-gTIR~NLdp~---~~~sd~eI~----~aL~~~~L~~~v~~lp~gLdt~v~e 1352 (1470)
||. +++++|++.++. .|+++|+... ...++++.. ++++..++.+.+ ..
T Consensus 84 ~g~-------------~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~ 139 (264)
T PRK13546 84 NGE-------------VSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEFI-----------YQ 139 (264)
T ss_pred CCE-------------EeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------cC
Confidence 994 457788886664 4999998531 123444433 345555554433 23
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCC
Q 000475 1353 DGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEG 1430 (1470)
Q Consensus 1353 ~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G 1430 (1470)
....||+|||||++||||++++|+||+|||||++||+.+.+.+.+.|++.. .++|+|+++|+++.+.. ||+|++|++|
T Consensus 140 ~~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~~G 219 (264)
T PRK13546 140 PVKKYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEGG 219 (264)
T ss_pred CcccCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEECC
Confidence 345799999999999999999999999999999999999999999988753 47899999999999876 9999999999
Q ss_pred EEEEecChhHHhhcCCChH
Q 000475 1431 KVLEYDSPRQLLEDNSSSF 1449 (1470)
Q Consensus 1431 ~vvE~g~p~~Ll~~~~s~f 1449 (1470)
++++.|++++++++....|
T Consensus 220 ~i~~~g~~~~~~~~~~~~~ 238 (264)
T PRK13546 220 KLKDYGELDDVLPKYEAFL 238 (264)
T ss_pred EEEEeCCHHHHHHHhHHHH
Confidence 9999999999987643333
No 452
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=324.82 Aligned_cols=205 Identities=22% Similarity=0.355 Sum_probs=167.8
Q ss_pred CCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcC-----CCCcEEEECC-
Q 000475 587 SDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG- 659 (1470)
Q Consensus 587 ~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g- 659 (1470)
++..++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++| ++|++ .++|
T Consensus 16 ~~~~l~~~nl~~~~~~--------~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I-~~~g~ 86 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--------KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKI-TLDGE 86 (267)
T ss_pred CCceEEEEeEEEEECC--------EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEE-EECCE
Confidence 3457999999999963 357889 999999999999999999999999999999874 88986 5554
Q ss_pred --------------EeEEEcCCCCCCCccHHHHHhcCCCC-----C----HHHHHHHHHHhcchHHHHhccCCCcccccC
Q 000475 660 --------------KKAYVPQSSWIQTGTIRENILFGKDM-----R----QSFYEEVLEGCALNQDIEMWADGDLSVVGE 716 (1470)
Q Consensus 660 --------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~-----~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~ 716 (1470)
.++|++|++.++..|++||+.++... . .++.+++++.+++.+++. +..+.
T Consensus 87 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~ 159 (267)
T PRK14235 87 DIYDPRLDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHE 159 (267)
T ss_pred ECcccccchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhC
Confidence 36999999998888999999976321 1 122344555555543221 12356
Q ss_pred CCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCC
Q 000475 717 RGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDG 795 (1470)
Q Consensus 717 ~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G 795 (1470)
.+.+||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||++++|++|
T Consensus 160 ~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G 238 (267)
T PRK14235 160 PGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEE-LIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLG 238 (267)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHH-HHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECC
Confidence 778999999999999999999999999999999999998777765 55555557899999999999865 9999999999
Q ss_pred EEEEecChhhHHh
Q 000475 796 KIEQSGKYEDLIA 808 (1470)
Q Consensus 796 ~i~~~g~~~~l~~ 808 (1470)
++++.|+.+++..
T Consensus 239 ~i~~~g~~~~~~~ 251 (267)
T PRK14235 239 NLVEVGDTEKMFT 251 (267)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999988865
No 453
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=3.7e-34 Score=313.31 Aligned_cols=173 Identities=27% Similarity=0.435 Sum_probs=147.9
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCC--CCHHHHhcccEEEccCC--CCCcc
Q 000475 1234 PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM--IGLQDLRSRLSIIPQDP--MLFQG 1309 (1470)
Q Consensus 1234 ~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~--i~l~~LR~~isiIpQdp--~LF~g 1309 (1470)
..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .....+|++++++||+| .+|..
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 84 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRPQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLFAA 84 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceeEEECCEEccccccchHHHHhhEEEEecChhhccccc
Confidence 359999999999999999999999999999999999999999999999999852 23456788999999998 57888
Q ss_pred cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000475 1310 TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDE 1382 (1470)
Q Consensus 1310 TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDE 1382 (1470)
|+++|+... ...+ ++++.++++.+++.++.... + ..||+|||||++|||||+++|++|+|||
T Consensus 85 tv~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~----~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 85 DVDQDVAFGPLNLGLSEAEVERRVREALTAVGASGLRERP-------T----HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCchhhhhCC-------h----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 999999631 1122 23567788888887654332 2 4699999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhh
Q 000475 1383 ATASIDTATDNVIQQTIREET-SRCTVITVAHRIPT 1417 (1470)
Q Consensus 1383 aTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~t 1417 (1470)
||++||+.+.+.+.+.|++.. +++|||+|+|+++.
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~~ 189 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVDL 189 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeecccc
Confidence 999999999999999998764 47899999999875
No 454
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=323.24 Aligned_cols=203 Identities=22% Similarity=0.369 Sum_probs=164.8
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCc--C---CCCcEEEECC---
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP--R---ISGAAIKVHG--- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~--~---~~G~~i~~~g--- 659 (1470)
..++++|+++.|+. .+.+++ ||++++||+++|+|+||||||||+++|+|.++ | ++|++ .++|
T Consensus 11 ~~l~i~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i-~~~g~~~ 81 (259)
T PRK14274 11 EVYQINGMNLWYGQ--------HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEM-NYNGSNI 81 (259)
T ss_pred ceEEEeeEEEEECC--------eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEE-EECCEEc
Confidence 35899999999963 357889 99999999999999999999999999999987 3 58986 5544
Q ss_pred ------------EeEEEcCCCCCCCccHHHHHhcCCCC----CHH----HHHHHHHHhcchHHHHhccCCCcccccCCCC
Q 000475 660 ------------KKAYVPQSSWIQTGTIRENILFGKDM----RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGI 719 (1470)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~----~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~ 719 (1470)
.++|++|++.+++.|++||+.++... +++ +.+++++..++.+.+. ...+..+.
T Consensus 82 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~ 154 (259)
T PRK14274 82 LKGKVDLVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQAL 154 (259)
T ss_pred cccccCHHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcc
Confidence 37999999998888999999886421 111 1223344444432221 23456788
Q ss_pred CCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEE
Q 000475 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1470)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~ 798 (1470)
+||||||||++||||++.+|+++||||||++||+++...+.+ ++..+.+++|+|+|||+++.+.. ||+|++|++|+++
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~ 233 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEE-LILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELV 233 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999998777754 56665567899999999999865 9999999999999
Q ss_pred EecChhhHHh
Q 000475 799 QSGKYEDLIA 808 (1470)
Q Consensus 799 ~~g~~~~l~~ 808 (1470)
+.|+.+++..
T Consensus 234 ~~g~~~~~~~ 243 (259)
T PRK14274 234 ECNDTNKMFS 243 (259)
T ss_pred EECCHHHHhh
Confidence 9999998865
No 455
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.1e-33 Score=316.49 Aligned_cols=194 Identities=23% Similarity=0.383 Sum_probs=156.9
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+... ...+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 2 l~~~~v~~~~~~~~----~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 76 (218)
T cd03266 2 ITADALTKRFRDVK----KTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFA-TVDGFDVVKEPAEA 76 (218)
T ss_pred eEEEEEEEecCCCC----ccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceE-EECCEEcccCHHHH
Confidence 67899999997431 11257889 99999999999999999999999999999999999986 6665
Q ss_pred --EeEEEcCCCCCCC-ccHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHH
Q 000475 660 --KKAYVPQSSWIQT-GTIRENILFGKD---MR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1470)
Q Consensus 660 --~~ayv~Q~~~i~~-~Ti~eNI~~g~~---~~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 729 (1470)
.++|++|++.++. .|++||+.+... .. .++.+++++..++.+ ..+.+..+||||||||+
T Consensus 77 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv 145 (218)
T cd03266 77 RRRLGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEE-----------LLDRRVGGFSTGMRQKV 145 (218)
T ss_pred HhhEEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHH-----------HHhhhhhhcCHHHHHHH
Confidence 3799999998876 599999976432 11 123334444444432 23456789999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000475 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 801 (1470)
+||||++.+|+++||||||++||+.+...+.+ .+..+ .+++|+|++||+++++.. ||++++|++|++.+.|
T Consensus 146 ~laral~~~p~illlDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 146 AIARALVHDPPVLLLDEPTTGLDVMATRALRE-FIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 99999999999999999999999999877765 45444 347899999999998765 9999999999998654
No 456
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-33 Score=321.50 Aligned_cols=200 Identities=28% Similarity=0.411 Sum_probs=161.3
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+.. .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~~-------~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~~ 72 (242)
T cd03295 1 IEFENVTKRYGGG-------KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEI-FIDGEDIREQDPVE 72 (242)
T ss_pred CEEEEEEEEeCCc-------ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-EECCeEcCcCChHH
Confidence 3678999999741 357888 99999999999999999999999999999999999986 6655
Q ss_pred ---EeEEEcCCCCCCC-ccHHHHHhcCCCC---CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHH
Q 000475 660 ---KKAYVPQSSWIQT-GTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQR 728 (1470)
Q Consensus 660 ---~~ayv~Q~~~i~~-~Ti~eNI~~g~~~---~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 728 (1470)
.++|++|++.++. .|++||+.++..+ +. ++..++++..++.. ....++.+.+||||||||
T Consensus 73 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qr 143 (242)
T cd03295 73 LRRKIGYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQR 143 (242)
T ss_pred hhcceEEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHH
Confidence 3699999998875 7999999876321 21 12233334333332 012346678999999999
Q ss_pred HHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhh
Q 000475 729 IQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYED 805 (1470)
Q Consensus 729 v~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 805 (1470)
++||||++.+|++++|||||++||+.+...+.+ ++..+. .++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 144 v~laral~~~p~llllDEPt~~LD~~~~~~l~~-~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 222 (242)
T cd03295 144 VGVARALAADPPLLLMDEPFGALDPITRDQLQE-EFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDE 222 (242)
T ss_pred HHHHHHHhcCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 999999999999999999999999998777765 444443 37999999999998765 99999999999999999888
Q ss_pred HHh
Q 000475 806 LIA 808 (1470)
Q Consensus 806 l~~ 808 (1470)
+.+
T Consensus 223 ~~~ 225 (242)
T cd03295 223 ILR 225 (242)
T ss_pred HHc
Confidence 764
No 457
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-34 Score=315.46 Aligned_cols=189 Identities=24% Similarity=0.379 Sum_probs=155.8
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|+++.|+. .+.+++ ||++++| +++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 1 i~~~~~~~~~~~--------~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 70 (211)
T cd03264 1 LQLENLTKRYGK--------KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTI-RIDGQDVLKQPQKL 70 (211)
T ss_pred CEEEEEEEEECC--------EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEE-EECCCccccchHHH
Confidence 468899999963 357888 9999999 999999999999999999999999999986 6665
Q ss_pred --EeEEEcCCCCCCC-ccHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHH
Q 000475 660 --KKAYVPQSSWIQT-GTIRENILFGKD---MR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1470)
Q Consensus 660 --~~ayv~Q~~~i~~-~Ti~eNI~~g~~---~~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 729 (1470)
.++|++|++.++. .|++||+.+... .+ +++.+++++.+++.+.. .....+||||||||+
T Consensus 71 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv 139 (211)
T cd03264 71 RRRIGYLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRA-----------KKKIGSLSGGMRRRV 139 (211)
T ss_pred HhheEEecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHH-----------hCchhhCCHHHHHHH
Confidence 3799999998876 499999987421 11 22334455555554322 245578999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000475 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 801 (1470)
+||||++++|+++||||||++||+.+...+.+ .++...+++|+|++||+++++.. ||++++|++|++++.|
T Consensus 140 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 140 GIAQALVGDPSILIVDEPTAGLDPEERIRFRN-LLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999888765 55555557999999999999875 9999999999998754
No 458
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.2e-33 Score=338.56 Aligned_cols=198 Identities=26% Similarity=0.447 Sum_probs=166.0
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+. ...+++ ||++++||+++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 3 ~L~~~nls~~y~~--------~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I-~l~G~~i~~~~~~ 73 (402)
T PRK09536 3 MIDVSDLSVEFGD--------TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTV-LVAGDDVEALSAR 73 (402)
T ss_pred eEEEeeEEEEECC--------EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEE-EECCEEcCcCCHH
Confidence 4789999999963 357899 99999999999999999999999999999999999986 6765
Q ss_pred ----EeEEEcCCCCC-CCccHHHHHhcCCC-----C------CHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCch
Q 000475 660 ----KKAYVPQSSWI-QTGTIRENILFGKD-----M------RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1470)
Q Consensus 660 ----~~ayv~Q~~~i-~~~Ti~eNI~~g~~-----~------~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 723 (1470)
.+|||+|++-+ ++.|++||+.++.. + +.++.+++++..++.+. ......+|||
T Consensus 74 ~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~-----------~~~~~~~LSg 142 (402)
T PRK09536 74 AASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQF-----------ADRPVTSLSG 142 (402)
T ss_pred HHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchh-----------hcCChhhCCH
Confidence 36999999876 67899999998752 1 12234445555554322 2345679999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000475 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 801 (1470)
|||||++|||||+++|+++||||||++||+.+...+.+ +++.+. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~-lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G 221 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLE-LVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAG 221 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEec
Confidence 99999999999999999999999999999999888765 454443 57899999999999865 9999999999999999
Q ss_pred ChhhHHh
Q 000475 802 KYEDLIA 808 (1470)
Q Consensus 802 ~~~~l~~ 808 (1470)
++++++.
T Consensus 222 ~~~ev~~ 228 (402)
T PRK09536 222 PPADVLT 228 (402)
T ss_pred CHHHHhC
Confidence 9999875
No 459
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=323.75 Aligned_cols=203 Identities=23% Similarity=0.323 Sum_probs=164.3
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCc-----CCCCcEEEECC---
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKVHG--- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~~g--- 659 (1470)
..++++|++++|++ ...+++ ||++++|++++|+|+||||||||+++|+|+.+ |++|++ .++|
T Consensus 20 ~~l~~~~l~~~~~~--------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i-~~~g~~i 90 (268)
T PRK14248 20 HILEVKDLSIYYGE--------KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEI-LYEGLNI 90 (268)
T ss_pred ceEEEEEEEEEeCC--------ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEE-EECCEEc
Confidence 46899999999963 357889 99999999999999999999999999999864 689986 5543
Q ss_pred ------------EeEEEcCCCCCCCccHHHHHhcCCCCC----H----HHHHHHHHHhcchHHHHhccCCCcccccCCCC
Q 000475 660 ------------KKAYVPQSSWIQTGTIRENILFGKDMR----Q----SFYEEVLEGCALNQDIEMWADGDLSVVGERGI 719 (1470)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~~----~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~ 719 (1470)
.++|++|++.+++.|++||+.++.... . ++..++++.+++..++. ...+..+.
T Consensus 91 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~ 163 (268)
T PRK14248 91 LDSNINVVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSAL 163 (268)
T ss_pred ccccccHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcc
Confidence 379999999988889999999763211 1 11223333333322111 23456788
Q ss_pred CCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEE
Q 000475 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1470)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~ 798 (1470)
+||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++++.. ||+|++|++|+++
T Consensus 164 ~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~ 242 (268)
T PRK14248 164 SLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEE-LITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLV 242 (268)
T ss_pred cCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHH-HHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999887755 56555557899999999998765 9999999999999
Q ss_pred EecChhhHHh
Q 000475 799 QSGKYEDLIA 808 (1470)
Q Consensus 799 ~~g~~~~l~~ 808 (1470)
+.|+.+++..
T Consensus 243 ~~~~~~~~~~ 252 (268)
T PRK14248 243 EYDQTEQIFT 252 (268)
T ss_pred EeCCHHHHHh
Confidence 9999988765
No 460
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-33 Score=336.23 Aligned_cols=202 Identities=24% Similarity=0.309 Sum_probs=169.6
Q ss_pred cEEEEeEEEEeCCCC-CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhccc
Q 000475 1219 KIELENLLVQYNPTL-PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1297 (1470)
Q Consensus 1219 ~I~~~nvs~~Y~~~~-~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1297 (1470)
.++++|++++|+.+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.+.
T Consensus 21 mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~------------ 88 (549)
T PRK13545 21 FDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA------------ 88 (549)
T ss_pred eeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee------------
Confidence 589999999997642 3699999999999999999999999999999999999999999999999752
Q ss_pred EEEccCCCCCc-ccHHHhcCcC---CCCCHHH----HHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000475 1298 SIIPQDPMLFQ-GTVRTNLDPL---EQHSDQE----IWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1369 (1470)
Q Consensus 1298 siIpQdp~LF~-gTIR~NLdp~---~~~sd~e----I~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1369 (1470)
++++.+.++. .|+++|+... ...++++ +.++++.+++.++... + ...||||||||++|||
T Consensus 89 -~i~~~~~l~~~lTV~EnL~l~~~~~~~~~~e~~e~i~elLe~lgL~~~ld~-------~----~~~LSGGQrQRVaLAr 156 (549)
T PRK13545 89 -LIAISSGLNGQLTGIENIELKGLMMGLTKEKIKEIIPEIIEFADIGKFIYQ-------P----VKTYSSGMKSRLGFAI 156 (549)
T ss_pred -eEEeccccCCCCcHHHHHHhhhhhcCCCHHHHHHHHHHHHHHcCChhHhhC-------C----cccCCHHHHHHHHHHH
Confidence 2333444443 4999998642 1233333 4467777887665433 2 3569999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000475 1370 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1444 (1470)
Q Consensus 1370 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~~ 1444 (1470)
||+++|++|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 157 AL~~~P~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~~el~~~ 233 (549)
T PRK13545 157 SVHINPDILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDIKEVVDH 233 (549)
T ss_pred HHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhh
Confidence 9999999999999999999999999999998753 47899999999999976 999999999999999999999864
No 461
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=6.7e-34 Score=358.19 Aligned_cols=211 Identities=27% Similarity=0.446 Sum_probs=175.3
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCC--CCCCcEEEEc----------------
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV--EPSGGRILID---------------- 1281 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~--~p~~G~I~ID---------------- 1281 (1470)
|+++|++++|.. ..+|+|+||++++||++||+|+||||||||+++|.|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~ 78 (520)
T TIGR03269 1 IEVKNLTKKFDG--KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKV 78 (520)
T ss_pred CEEEEEEEEECC--eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccc
Confidence 578999999953 35999999999999999999999999999999999996 7999999997
Q ss_pred -------CEeCC-------CCC---HHHHhcccEEEccC-CCCCcc-cHHHhcCc-C--CCCC----HHHHHHHHHHcCc
Q 000475 1282 -------GVDIS-------MIG---LQDLRSRLSIIPQD-PMLFQG-TVRTNLDP-L--EQHS----DQEIWEVINKCHL 1335 (1470)
Q Consensus 1282 -------G~dI~-------~i~---l~~LR~~isiIpQd-p~LF~g-TIR~NLdp-~--~~~s----d~eI~~aL~~~~L 1335 (1470)
|.++. ..+ ...+|++++++||+ +.+|.. |+++|+.. . ...+ ++++.++++.+++
T Consensus 79 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl 158 (520)
T TIGR03269 79 GEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQL 158 (520)
T ss_pred ccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC
Confidence 33331 111 23467889999998 567764 99999853 1 1122 2356677888887
Q ss_pred HHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEEec
Q 000475 1336 AEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAH 1413 (1470)
Q Consensus 1336 ~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAH 1413 (1470)
.+... .. ..+||||||||++|||||+.+|++|+|||||++||+++.+.+.+.|++.. .++|||+|+|
T Consensus 159 ~~~~~-------~~----~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtH 227 (520)
T TIGR03269 159 SHRIT-------HI----ARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSH 227 (520)
T ss_pred hhhhh-------cC----cccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeC
Confidence 65432 22 34699999999999999999999999999999999999999999998863 3789999999
Q ss_pred Chhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000475 1414 RIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1443 (1470)
Q Consensus 1414 Rl~ti~~-~DrIlvL~~G~vvE~g~p~~Ll~ 1443 (1470)
+++.+.. ||+|++|++|++++.|+++++++
T Consensus 228 d~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 258 (520)
T TIGR03269 228 WPEVIEDLSDKAIWLENGEIKEEGTPDEVVA 258 (520)
T ss_pred CHHHHHHhcCEEEEEeCCEEeeecCHHHHHH
Confidence 9999976 99999999999999999988865
No 462
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=321.43 Aligned_cols=202 Identities=23% Similarity=0.369 Sum_probs=163.9
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCC--cC---CCCcEEEECC----
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEI--PR---ISGAAIKVHG---- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~--~~---~~G~~i~~~g---- 659 (1470)
.++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|.. +| ++|++ .++|
T Consensus 5 ~l~~~~l~~~~~~--------~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i-~~~g~~~~ 75 (252)
T PRK14239 5 ILQVSDLSVYYNK--------KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSI-VYNGHNIY 75 (252)
T ss_pred eEEEEeeEEEECC--------eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceE-EECCEECc
Confidence 5889999999963 357888 9999999999999999999999999999985 35 48986 5544
Q ss_pred -----------EeEEEcCCCCCCCccHHHHHhcCCCC----CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~eNI~~g~~~----~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
.++|++|++.+++.|++||+.++... ++ ++.+++++.+++...+. +..+..+.+
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 148 (252)
T PRK14239 76 SPRTDTVDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALG 148 (252)
T ss_pred CcccchHhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCccc
Confidence 37999999999889999999875321 11 12223344444432221 234567889
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEE
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~ 799 (1470)
||||||||++||||++.+|+++||||||++||+.+...+++ ++..+.+++|+|++||+++.+.. ||+|++|++|++++
T Consensus 149 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 227 (252)
T PRK14239 149 LSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEE-TLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIE 227 (252)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHH-HHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999888865 55555557899999999998765 99999999999999
Q ss_pred ecChhhHHh
Q 000475 800 SGKYEDLIA 808 (1470)
Q Consensus 800 ~g~~~~l~~ 808 (1470)
.|+.+++.+
T Consensus 228 ~g~~~~~~~ 236 (252)
T PRK14239 228 YNDTKQMFM 236 (252)
T ss_pred eCCHHHHHh
Confidence 999988865
No 463
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=322.09 Aligned_cols=202 Identities=24% Similarity=0.351 Sum_probs=164.6
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCc-----CCCCcEEEECC----
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKVHG---- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~~g---- 659 (1470)
.++++|++|+|+. .+.+++ ||++++||+++|+|+||||||||+++|+|+++ |++|++ .++|
T Consensus 4 ~l~~~~l~~~~~~--------~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v-~i~g~~~~ 74 (251)
T PRK14251 4 IISAKDVHLSYGN--------YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEI-KFEGQNIY 74 (251)
T ss_pred eEEEEeeEEEECC--------eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEE-EECCEEcc
Confidence 4889999999963 357889 99999999999999999999999999999986 478986 5544
Q ss_pred -----------EeEEEcCCCCCCCccHHHHHhcCCCC----CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~eNI~~g~~~----~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
.++|++|++.+++.|++||+.++... +. ++.+++++.+++..+. ....+..+.+
T Consensus 75 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~ 147 (251)
T PRK14251 75 GSKMDLVELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQA 147 (251)
T ss_pred cccchHHHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhh
Confidence 37899999998889999999876421 11 2233444444443211 1123467789
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEE
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~ 799 (1470)
||||||||++||||++++|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++++.. ||+|++|++|++++
T Consensus 148 LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~ 226 (251)
T PRK14251 148 FSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEE-TLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIE 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHH-HHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999877765 45555567899999999999765 99999999999999
Q ss_pred ecChhhHHh
Q 000475 800 SGKYEDLIA 808 (1470)
Q Consensus 800 ~g~~~~l~~ 808 (1470)
.|+.+++..
T Consensus 227 ~~~~~~~~~ 235 (251)
T PRK14251 227 AGPTEEMFI 235 (251)
T ss_pred eCCHHHHHh
Confidence 999988765
No 464
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=322.40 Aligned_cols=203 Identities=24% Similarity=0.350 Sum_probs=165.0
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcC-----CCCcEEEECC---
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG--- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g--- 659 (1470)
..++++|+++.|++ .+.+++ ||++++||+++|+|+||||||||+++|+|..+| ++|++ .++|
T Consensus 11 ~~l~~~~l~~~~~~--------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i-~~~g~~i 81 (258)
T PRK14268 11 PQIKVENLNLWYGE--------KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKV-SIEGEDI 81 (258)
T ss_pred eeEEEeeeEEEeCC--------eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEE-EECCEEc
Confidence 46899999999863 357889 999999999999999999999999999999875 79986 5543
Q ss_pred ------------EeEEEcCCCCCCCccHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 660 ------------KKAYVPQSSWIQTGTIRENILFGKD---MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~eNI~~g~~---~~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
.++|++|++.++..|++||+.++.. .+.+ +.+++++.+++..++ ....+....+
T Consensus 82 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~ 154 (258)
T PRK14268 82 YEPDVDVVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALS 154 (258)
T ss_pred ccccchHHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhh
Confidence 3799999999888999999998632 1221 223344444442211 1224567789
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEE
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~ 799 (1470)
||||||||++||||++.+|+++||||||++||+.+...+.+ +++.+.+++|+|++||+++++.. ||+|++|++|++++
T Consensus 155 LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 233 (258)
T PRK14268 155 LSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIED-LIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIE 233 (258)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHH-HHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999887765 55555557999999999999865 99999999999999
Q ss_pred ecChhhHHh
Q 000475 800 SGKYEDLIA 808 (1470)
Q Consensus 800 ~g~~~~l~~ 808 (1470)
.|+++++.+
T Consensus 234 ~~~~~~~~~ 242 (258)
T PRK14268 234 FGQTRQIFH 242 (258)
T ss_pred eCCHHHHhc
Confidence 999988865
No 465
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.5e-33 Score=318.28 Aligned_cols=197 Identities=29% Similarity=0.417 Sum_probs=161.7
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|++ .+.+++ ||++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 2 l~~~~l~~~~~~--------~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~~ 72 (240)
T PRK09493 2 IEFKNVSKHFGP--------TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDL-IVDGLKVNDPKVDE 72 (240)
T ss_pred EEEEeEEEEECC--------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEECCcCChhH
Confidence 678999999863 357889 99999999999999999999999999999999999986 6654
Q ss_pred -----EeEEEcCCCCCCC-ccHHHHHhcCCC----CCHH----HHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 660 -----KKAYVPQSSWIQT-GTIRENILFGKD----MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 660 -----~~ayv~Q~~~i~~-~Ti~eNI~~g~~----~~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
.++|++|++.++. .|++||+.++.. .+.. +..++++..++. ...+.+..+|||||
T Consensus 73 ~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~ 141 (240)
T PRK09493 73 RLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLA-----------ERAHHYPSELSGGQ 141 (240)
T ss_pred HHHhhceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------HHHhcChhhcCHHH
Confidence 3699999988764 699999988631 1221 222333333332 22345678999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecCh
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKY 803 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 803 (1470)
|||++||||++.+|++++|||||++||+++...+.+ ++..+. +++|+|++||+++++.. ||+|++|++|++++.|++
T Consensus 142 ~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 220 (240)
T PRK09493 142 QQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLK-VMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDP 220 (240)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCH
Confidence 999999999999999999999999999999887765 455443 47999999999999875 999999999999999999
Q ss_pred hhHHh
Q 000475 804 EDLIA 808 (1470)
Q Consensus 804 ~~l~~ 808 (1470)
+++.+
T Consensus 221 ~~~~~ 225 (240)
T PRK09493 221 QVLIK 225 (240)
T ss_pred HHHhc
Confidence 88765
No 466
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.2e-33 Score=323.65 Aligned_cols=199 Identities=25% Similarity=0.326 Sum_probs=162.6
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1470)
..++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 6 ~~l~~~~l~~~~~~--------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~i~~~~~ 76 (269)
T PRK11831 6 NLVDMRGVSFTRGN--------RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEI-LFDGENIPAMSR 76 (269)
T ss_pred ceEEEeCeEEEECC--------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEEccccCh
Confidence 35899999999963 357888 99999999999999999999999999999999999986 6554
Q ss_pred --------EeEEEcCCCCCCC-ccHHHHHhcCCC----CCHH----HHHHHHHHhcchHHHHhccCCCcccccCCCCCCc
Q 000475 660 --------KKAYVPQSSWIQT-GTIRENILFGKD----MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1470)
Q Consensus 660 --------~~ayv~Q~~~i~~-~Ti~eNI~~g~~----~~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LS 722 (1470)
.++|++|++.++. .|++||+.++.. .+.. +..+.++..++.+ ....+..+||
T Consensus 77 ~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS 145 (269)
T PRK11831 77 SRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRG-----------AAKLMPSELS 145 (269)
T ss_pred hhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCC
Confidence 3789999998876 499999987521 1221 2223334333322 2234567999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhhh-cCEEEEEeCCEEEE
Q 000475 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1470)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~ 799 (1470)
||||||++||||++.+|+++||||||++||+.+...+.+ ++..+. + ++|+|++||+++++.. ||+|++|++|++++
T Consensus 146 gGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~ 224 (269)
T PRK11831 146 GGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVK-LISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVA 224 (269)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEE
Confidence 999999999999999999999999999999999877765 454443 2 7899999999999875 99999999999999
Q ss_pred ecChhhHHh
Q 000475 800 SGKYEDLIA 808 (1470)
Q Consensus 800 ~g~~~~l~~ 808 (1470)
.|+.+++.+
T Consensus 225 ~g~~~~~~~ 233 (269)
T PRK11831 225 HGSAQALQA 233 (269)
T ss_pred eCCHHHHhc
Confidence 999998875
No 467
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.2e-33 Score=336.13 Aligned_cols=188 Identities=31% Similarity=0.444 Sum_probs=156.3
Q ss_pred cccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------------------EeEEEcCCC
Q 000475 611 TIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------------------KKAYVPQSS 668 (1470)
Q Consensus 611 ~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------------------~~ayv~Q~~ 668 (1470)
...+++ ||++++||+++|+|+||||||||+++|+|+++|++|++ .++| .++||+|++
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I-~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~ 115 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSV-LVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKF 115 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEE-EECCEecccccccCCHHHHHHHhcCCEEEEECCC
Confidence 456788 99999999999999999999999999999999999986 6665 379999999
Q ss_pred CCCC-ccHHHHHhcCCCC---CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHccCCC
Q 000475 669 WIQT-GTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSD 740 (1470)
Q Consensus 669 ~i~~-~Ti~eNI~~g~~~---~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 740 (1470)
.+++ .|++||+.++... +. ++.+++++..+|... ......+|||||||||+|||||+.+|+
T Consensus 116 ~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~-----------~~~~~~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 116 ALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQW-----------ADKKPGELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9876 7999999987432 11 233445555555432 234567899999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhhHHhhc
Q 000475 741 VYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYEDLIADQ 810 (1470)
Q Consensus 741 i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 810 (1470)
|+|||||||+||+.+...+++.+..... .++|+|+||||++++. .||+|++|++|++++.|+.+++...+
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p 256 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNP 256 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCc
Confidence 9999999999999998888775543323 2799999999999975 59999999999999999999987633
No 468
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=321.55 Aligned_cols=202 Identities=26% Similarity=0.379 Sum_probs=164.9
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCC---CcC--CCCcEEEECC----
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGE---IPR--ISGAAIKVHG---- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~---~~~--~~G~~i~~~g---- 659 (1470)
.++++|+++.|+. ...+++ ||++++|++++|+|+||||||||+++|+|. .+| ++|++ .++|
T Consensus 3 ~l~~~~~~~~~~~--------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i-~~~g~~~~ 73 (250)
T PRK14245 3 KIDARDVNFWYGD--------FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEI-RIDGRNIY 73 (250)
T ss_pred EEEEEEEEEEECC--------EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEE-EECCEecc
Confidence 5889999999963 347888 999999999999999999999999999996 454 48976 5543
Q ss_pred -----------EeEEEcCCCCCCCccHHHHHhcCCCC----C----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----R----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~eNI~~g~~~----~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
.++|++|++.++..|++||+.++... + +++.+++++.+++.++++ +..++.+.+
T Consensus 74 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 146 (250)
T PRK14245 74 DKGVQVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFA 146 (250)
T ss_pred cccccHHHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCccc
Confidence 37999999998888999999876321 1 123344555555543222 234567889
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEE
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~ 799 (1470)
||||||||++||||++.+|+++||||||++||+.+...+.+ .++.+.+++|+|+|||+++.+.. ||+|++|++|++++
T Consensus 147 LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~ 225 (250)
T PRK14245 147 LSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEE-LIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVE 225 (250)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999887765 55555567999999999999865 99999999999999
Q ss_pred ecChhhHHh
Q 000475 800 SGKYEDLIA 808 (1470)
Q Consensus 800 ~g~~~~l~~ 808 (1470)
.|+++++.+
T Consensus 226 ~~~~~~~~~ 234 (250)
T PRK14245 226 YDDTKKIFT 234 (250)
T ss_pred ECCHHHHhc
Confidence 999998875
No 469
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-33 Score=321.27 Aligned_cols=204 Identities=23% Similarity=0.358 Sum_probs=165.9
Q ss_pred CccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCc-----CCCCcEEEECC--
Q 000475 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKVHG-- 659 (1470)
Q Consensus 588 ~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~~g-- 659 (1470)
+..++++|++++|+. ...+++ ||++++|++++|+|+||||||||+++|+|.++ |++|++ .++|
T Consensus 11 ~~~l~i~nl~~~~~~--------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v-~~~g~~ 81 (269)
T PRK14259 11 NIIISLQNVTISYGT--------FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRV-LFDGTD 81 (269)
T ss_pred CceEEEEeEEEEECC--------EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEE-EECCEE
Confidence 346999999999963 357889 99999999999999999999999999999987 588986 5554
Q ss_pred -------------EeEEEcCCCCCCCccHHHHHhcCCCCC------HHHHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 660 -------------KKAYVPQSSWIQTGTIRENILFGKDMR------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 -------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~~------~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
.++|++|++.++..|++||+.++.... +++.+++++.+++...++ ........+
T Consensus 82 i~~~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~ 154 (269)
T PRK14259 82 LYDPRVDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYS 154 (269)
T ss_pred cccccCCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCccc
Confidence 379999999988789999999875321 122333444444322221 234567789
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeC-----
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKD----- 794 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~----- 794 (1470)
||||||||++||||++.+|+++||||||++||+.+...+.+ .++.+.+++|+|++||+++++.. ||++++|++
T Consensus 155 LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~ 233 (269)
T PRK14259 155 LSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEE-TMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEG 233 (269)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEecccccc
Confidence 99999999999999999999999999999999999888765 55555567899999999998865 999999996
Q ss_pred ------CEEEEecChhhHHh
Q 000475 795 ------GKIEQSGKYEDLIA 808 (1470)
Q Consensus 795 ------G~i~~~g~~~~l~~ 808 (1470)
|++++.|+.+++..
T Consensus 234 ~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 234 GSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred ccccccceEEEeCCHHHHHh
Confidence 67899999988865
No 470
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.6e-33 Score=304.83 Aligned_cols=165 Identities=28% Similarity=0.551 Sum_probs=147.4
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE---------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK--------- 660 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~--------- 660 (1470)
++++|++++|+.. ..+.+++ ||++++||+++|+|+||||||||+++|+|+.+|++|++ .++|.
T Consensus 1 i~~~~~~~~~~~~------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~~ 73 (178)
T cd03247 1 LSINNVSFSYPEQ------EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEI-TLDGVPVSDLEKAL 73 (178)
T ss_pred CEEEEEEEEeCCC------CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEE-EECCEEHHHHHHHH
Confidence 4688999999743 2357889 99999999999999999999999999999999999986 77763
Q ss_pred ---eEEEcCCCCCCCccHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHHHHHcc
Q 000475 661 ---KAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYS 737 (1470)
Q Consensus 661 ---~ayv~Q~~~i~~~Ti~eNI~~g~~~~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~ 737 (1470)
++|++|++++++.|++||+ +.+||||||||++||||++.
T Consensus 74 ~~~i~~~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~ 115 (178)
T cd03247 74 SSLISVLNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQ 115 (178)
T ss_pred HhhEEEEccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhc
Confidence 6999999999889999998 46899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEec
Q 000475 738 NSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 738 ~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g 801 (1470)
+|+++||||||++||+++.+.+++ .+..+.+++|+|++||++++++.||++++|++|++++.|
T Consensus 116 ~p~~lllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 116 DAPIVLLDEPTVGLDPITERQLLS-LIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred CCCEEEEECCcccCCHHHHHHHHH-HHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999887765 455555689999999999999889999999999998754
No 471
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1e-33 Score=310.95 Aligned_cols=188 Identities=20% Similarity=0.322 Sum_probs=160.3
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
|+++|++++|++ +.++ ++||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++.... ++.+++
T Consensus 2 l~~~~l~~~~~~--~~l~-~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~----~~~~~~ 74 (195)
T PRK13541 2 LSLHQLQFNIEQ--KNLF-DLSITFLPSAITYIKGANGCGKSSLLRMIAGIMQPSSGNIYYKNCNINNIA----KPYCTY 74 (195)
T ss_pred eEEEEeeEEECC--cEEE-EEEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCcccChhh----hhhEEe
Confidence 689999999964 3344 599999999999999999999999999999999999999999999987542 456999
Q ss_pred EccCCC-CCcccHHHhcCcCC-CC-CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000475 1300 IPQDPM-LFQGTVRTNLDPLE-QH-SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1376 (1470)
Q Consensus 1300 IpQdp~-LF~gTIR~NLdp~~-~~-sd~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1376 (1470)
+||++. +|..|+++|+.... .+ .++++.++++.+++.+... ..+.+||+|||||++||||++++|+
T Consensus 75 ~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~~rl~la~al~~~p~ 143 (195)
T PRK13541 75 IGHNLGLKLEMTVFENLKFWSEIYNSAETLYAAIHYFKLHDLLD-----------EKCYSLSSGMQKIVAIARLIACQSD 143 (195)
T ss_pred ccCCcCCCccCCHHHHHHHHHHhcccHHHHHHHHHHcCCHhhhc-----------cChhhCCHHHHHHHHHHHHHhcCCC
Confidence 999875 46789999996422 11 3567788888888865533 2345799999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecChhhhhhcCEEE
Q 000475 1377 ILVLDEATASIDTATDNVIQQTIREE-TSRCTVITVAHRIPTVIDNDLVL 1425 (1470)
Q Consensus 1377 ILlLDEaTsslD~~Td~~Iq~~I~~~-~~~~TVI~IAHRl~ti~~~DrIl 1425 (1470)
+++|||||+++|+.+.+.+.+.|++. .+++|+|+|+|+++.+.++|-|.
T Consensus 144 ~lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~ 193 (195)
T PRK13541 144 LWLLDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLESSIKSAQILQ 193 (195)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCccccchhheec
Confidence 99999999999999999999999753 46799999999999999999764
No 472
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.9e-33 Score=332.18 Aligned_cols=200 Identities=30% Similarity=0.439 Sum_probs=164.4
Q ss_pred CccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC-------
Q 000475 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------- 659 (1470)
Q Consensus 588 ~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------- 659 (1470)
...|+++|++++|+. ...+++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 39 ~~~i~i~nl~k~y~~--------~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i-~i~G~~~~~~~ 109 (340)
T PRK13536 39 TVAIDLAGVSKSYGD--------KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKI-TVLGVPVPARA 109 (340)
T ss_pred ceeEEEEEEEEEECC--------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEE-EECCEECCcch
Confidence 356999999999963 357889 99999999999999999999999999999999999986 7766
Q ss_pred -----EeEEEcCCCCCC-CccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHH
Q 000475 660 -----KKAYVPQSSWIQ-TGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1470)
Q Consensus 660 -----~~ayv~Q~~~i~-~~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 726 (1470)
.+||+||++.++ ..|++||+.+... .+. ++.+++++.+++.+ ....+..+||||||
T Consensus 110 ~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~-----------~~~~~~~~LS~G~k 178 (340)
T PRK13536 110 RLARARIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-----------KADARVSDLSGGMK 178 (340)
T ss_pred HHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------hhCCChhhCCHHHH
Confidence 379999998875 5799999985321 121 12233334333322 12355679999999
Q ss_pred HHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChh
Q 000475 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYE 804 (1470)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 804 (1470)
||++|||||.++|+++||||||++||+.+...+++. +..+ .+|+|||++||+++.+.. ||+|++|++|++++.|+.+
T Consensus 179 qrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~-l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~ 257 (340)
T PRK13536 179 RRLTLARALINDPQLLILDEPTTGLDPHARHLIWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPH 257 (340)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHH
Confidence 999999999999999999999999999998888764 4444 358999999999999875 9999999999999999999
Q ss_pred hHHh
Q 000475 805 DLIA 808 (1470)
Q Consensus 805 ~l~~ 808 (1470)
++..
T Consensus 258 ~l~~ 261 (340)
T PRK13536 258 ALID 261 (340)
T ss_pred HHHh
Confidence 8865
No 473
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-33 Score=313.44 Aligned_cols=190 Identities=26% Similarity=0.444 Sum_probs=154.7
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------E
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------K 660 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------~ 660 (1470)
++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++| .
T Consensus 1 l~~~~l~~~~~~--------~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~~ 71 (210)
T cd03269 1 LEVENVTKRFGR--------VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEV-LFDGKPLDIAARNR 71 (210)
T ss_pred CEEEEEEEEECC--------EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCCchhHHHHcc
Confidence 468899999863 357888 99999999999999999999999999999999999996 7766 4
Q ss_pred eEEEcCCCCCCC-ccHHHHHhcCCCC---C----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHHHH
Q 000475 661 KAYVPQSSWIQT-GTIRENILFGKDM---R----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLA 732 (1470)
Q Consensus 661 ~ayv~Q~~~i~~-~Ti~eNI~~g~~~---~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 732 (1470)
++|++|++.++. .|++||+.++... . +++.++.++..++.. .......+||||||||++||
T Consensus 72 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la 140 (210)
T cd03269 72 IGYLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSE-----------YANKRVEELSKGNQQKVQFI 140 (210)
T ss_pred EEEeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChH-----------HHhCcHhhCCHHHHHHHHHH
Confidence 799999988765 5999999875321 1 122333344444332 23456779999999999999
Q ss_pred HHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000475 733 RAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 733 RAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 801 (1470)
||++.+|+++||||||++||+.+...+.+. ++.+ .+++|+|++||+++.+.. ||++++|++|++.+.|
T Consensus 141 ~al~~~p~~lllDEP~~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 141 AAVIHDPELLILDEPFSGLDPVNVELLKDV-IRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999999998887764 4443 357899999999999865 9999999999998654
No 474
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.6e-33 Score=321.28 Aligned_cols=200 Identities=26% Similarity=0.384 Sum_probs=163.6
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1470)
..++++|+++.|++ ...+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 4 ~~l~~~~l~~~~~~--------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i-~~~g~~~~~~~~ 74 (257)
T PRK10619 4 NKLNVIDLHKRYGE--------HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSI-VVNGQTINLVRD 74 (257)
T ss_pred ccEEEeeeEEEECC--------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEE-EECCEEcccccc
Confidence 45899999999963 357888 99999999999999999999999999999999999986 5554
Q ss_pred ------------------EeEEEcCCCCCCC-ccHHHHHhcCC----CCCH----HHHHHHHHHhcchHHHHhccCCCcc
Q 000475 660 ------------------KKAYVPQSSWIQT-GTIRENILFGK----DMRQ----SFYEEVLEGCALNQDIEMWADGDLS 712 (1470)
Q Consensus 660 ------------------~~ayv~Q~~~i~~-~Ti~eNI~~g~----~~~~----~~y~~v~~~~~l~~d~~~l~~g~~t 712 (1470)
.++|++|++.++. .|++||+.++. ..+. ++..++++..++...+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------- 145 (257)
T PRK10619 75 KDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA--------- 145 (257)
T ss_pred cccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh---------
Confidence 3799999998876 59999998742 1111 1223333333332211
Q ss_pred cccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEE
Q 000475 713 VVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVL 790 (1470)
Q Consensus 713 ~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~ 790 (1470)
.+....+||||||||++||||++++|+++||||||++||+.+.+.+.+ ++..+. +++|+|+|||+++++.. ||+|+
T Consensus 146 -~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~g~tiiivsH~~~~~~~~~d~i~ 223 (257)
T PRK10619 146 -QGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLR-IMQQLAEEGKTMVVVTHEMGFARHVSSHVI 223 (257)
T ss_pred -hhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEE
Confidence 145678999999999999999999999999999999999999888875 455443 48999999999999886 99999
Q ss_pred EEeCCEEEEecChhhHHh
Q 000475 791 VMKDGKIEQSGKYEDLIA 808 (1470)
Q Consensus 791 ~l~~G~i~~~g~~~~l~~ 808 (1470)
+|++|++++.|+++++..
T Consensus 224 ~l~~G~i~~~~~~~~~~~ 241 (257)
T PRK10619 224 FLHQGKIEEEGAPEQLFG 241 (257)
T ss_pred EEECCEEEEeCCHHHhhh
Confidence 999999999999988765
No 475
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=319.76 Aligned_cols=202 Identities=23% Similarity=0.337 Sum_probs=167.0
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcC-----CCCcEEEECC----
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG---- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g---- 659 (1470)
-++++|+++.|+. ...+++ ||++++||+++|+|+||||||||+++|+|..+| ++|++ .++|
T Consensus 4 ~l~~~~l~~~~~~--------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i-~~~g~~i~ 74 (251)
T PRK14270 4 KMESKNLNLWYGE--------KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEV-LLDGKNIY 74 (251)
T ss_pred EEEEEEeEEEECC--------eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEE-EECCEecc
Confidence 4789999999963 357889 999999999999999999999999999999875 78986 5544
Q ss_pred -----------EeEEEcCCCCCCCccHHHHHhcCCCC----CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~eNI~~g~~~----~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
.++|++|++.++..|++||+.|+... +. ++.+++++.+++..+++. ..+.+..+
T Consensus 75 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~ 147 (251)
T PRK14270 75 DKDVDVVELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALK 147 (251)
T ss_pred cccccHHHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCccc
Confidence 37999999998889999999986421 11 233455566655433321 23467789
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEE
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~ 799 (1470)
||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|+|||+++.+.. ||+|++|++|++++
T Consensus 148 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~ 226 (251)
T PRK14270 148 LSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIED-LMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIE 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEE
Confidence 99999999999999999999999999999999999888765 56555557899999999999875 99999999999999
Q ss_pred ecChhhHHh
Q 000475 800 SGKYEDLIA 808 (1470)
Q Consensus 800 ~g~~~~l~~ 808 (1470)
.|+.+++..
T Consensus 227 ~~~~~~~~~ 235 (251)
T PRK14270 227 FNKTEKIFL 235 (251)
T ss_pred eCCHHHHhc
Confidence 999988865
No 476
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=322.04 Aligned_cols=204 Identities=25% Similarity=0.352 Sum_probs=168.5
Q ss_pred CccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCc-----CCCCcEEEECC--
Q 000475 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKVHG-- 659 (1470)
Q Consensus 588 ~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~~g-- 659 (1470)
...++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|+++ |++|++ .++|
T Consensus 18 ~~~l~~~nl~~~~~~--------~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i-~~~g~~ 88 (267)
T PRK14237 18 EIALSTKDLHVYYGK--------KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQI-LYRGID 88 (267)
T ss_pred CeEEEEeeEEEEECC--------eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEE-EECCEE
Confidence 346999999999953 357899 99999999999999999999999999999986 478986 5544
Q ss_pred -------------EeEEEcCCCCCCCccHHHHHhcCCCC----CH----HHHHHHHHHhcchHHHHhccCCCcccccCCC
Q 000475 660 -------------KKAYVPQSSWIQTGTIRENILFGKDM----RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERG 718 (1470)
Q Consensus 660 -------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~----~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g 718 (1470)
.++|++|++.++..|++|||.++... ++ ++..++++.+++.+++. +..+..+
T Consensus 89 ~~~~~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~ 161 (267)
T PRK14237 89 INRKEINVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSA 161 (267)
T ss_pred cccccCChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCc
Confidence 37999999998889999999986321 11 23344555555543332 2345778
Q ss_pred CCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEE
Q 000475 719 INLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1470)
Q Consensus 719 ~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i 797 (1470)
.+||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||+|++|++|++
T Consensus 162 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i 240 (267)
T PRK14237 162 LTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEE-TMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDL 240 (267)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 8999999999999999999999999999999999999877765 55555567899999999999865 999999999999
Q ss_pred EEecChhhHHh
Q 000475 798 EQSGKYEDLIA 808 (1470)
Q Consensus 798 ~~~g~~~~l~~ 808 (1470)
++.|+.+++..
T Consensus 241 ~~~g~~~~~~~ 251 (267)
T PRK14237 241 IEYDKTRNIFT 251 (267)
T ss_pred EEeCCHHHHhc
Confidence 99999988865
No 477
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-33 Score=325.79 Aligned_cols=201 Identities=26% Similarity=0.384 Sum_probs=166.4
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCC---CcEEEECC-----
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRIS---GAAIKVHG----- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~---G~~i~~~g----- 659 (1470)
..++++|++++|+.. ..+.+++ ||++++||+++|+|+||||||||+++|+|.++|++ |++ .++|
T Consensus 4 ~~l~i~~l~~~~~~~------~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i-~i~g~~~~~ 76 (282)
T PRK13640 4 NIVEFKHVSFTYPDS------KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKI-TVDGITLTA 76 (282)
T ss_pred ceEEEEEEEEEcCCC------CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEE-EECCEECCc
Confidence 468999999999642 2357888 99999999999999999999999999999999987 775 6655
Q ss_pred --------EeEEEcCCCC--CCCccHHHHHhcCCCC---CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCc
Q 000475 660 --------KKAYVPQSSW--IQTGTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1470)
Q Consensus 660 --------~~ayv~Q~~~--i~~~Ti~eNI~~g~~~---~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LS 722 (1470)
.++|++|+|+ +++.|++|||.|+... +. ++.+++++.+++.+. .+....+||
T Consensus 77 ~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LS 145 (282)
T PRK13640 77 KTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDY-----------IDSEPANLS 145 (282)
T ss_pred CCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhH-----------hcCCcccCC
Confidence 3699999984 5678999999986432 22 234445555555432 335567999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhhhcCEEEEEeCCEEEEe
Q 000475 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDAADLVLVMKDGKIEQS 800 (1470)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~ 800 (1470)
||||||++||||++.+|+++||||||++||+.+...+.+ ++..+. + ++|||++||+++.+..||+|++|++|++++.
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~ 224 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILK-LIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQ 224 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999888876 444443 3 7899999999999878999999999999999
Q ss_pred cChhhHHh
Q 000475 801 GKYEDLIA 808 (1470)
Q Consensus 801 g~~~~l~~ 808 (1470)
|+.+++..
T Consensus 225 g~~~~~~~ 232 (282)
T PRK13640 225 GSPVEIFS 232 (282)
T ss_pred CCHHHHhc
Confidence 99988765
No 478
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-33 Score=326.44 Aligned_cols=204 Identities=26% Similarity=0.397 Sum_probs=163.3
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+.... ...+.+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 2 ~l~~~~l~~~~~~~~~---~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i-~~~g~~i~~~~~~ 77 (280)
T PRK13649 2 GINLQNVSYTYQAGTP---FEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSV-RVDDTLITSTSKN 77 (280)
T ss_pred eEEEEEEEEEcCCCCc---cccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEEccccccc
Confidence 3789999999974300 01357889 99999999999999999999999999999999999986 6655
Q ss_pred --------EeEEEcCCC--CCCCccHHHHHhcCCC---CCHHH----HHHHHHHhcchHHHHhccCCCcccccCCCCCCc
Q 000475 660 --------KKAYVPQSS--WIQTGTIRENILFGKD---MRQSF----YEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1470)
Q Consensus 660 --------~~ayv~Q~~--~i~~~Ti~eNI~~g~~---~~~~~----y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LS 722 (1470)
.++|++|++ .+++.|++|||.++.. .+.+. .+++++..++..+ ....+..+||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LS 147 (280)
T PRK13649 78 KDIKQIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELS 147 (280)
T ss_pred cCHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCC
Confidence 269999997 5777899999987632 12221 2233333333211 2345678999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEe
Q 000475 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQS 800 (1470)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~ 800 (1470)
||||||++||||++.+|+++||||||++||+.+...+.+. +..+. .++|||++||+++++.. ||++++|++|++++.
T Consensus 148 gG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 226 (280)
T PRK13649 148 GGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTL-FKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLS 226 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999998877654 44443 47899999999999865 999999999999999
Q ss_pred cChhhHHh
Q 000475 801 GKYEDLIA 808 (1470)
Q Consensus 801 g~~~~l~~ 808 (1470)
|+.+++..
T Consensus 227 g~~~~~~~ 234 (280)
T PRK13649 227 GKPKDIFQ 234 (280)
T ss_pred CCHHHHhc
Confidence 99888765
No 479
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.4e-33 Score=320.47 Aligned_cols=198 Identities=28% Similarity=0.398 Sum_probs=161.5
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 3 ~l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~ 73 (250)
T PRK11264 3 AIEVKNLVKKFHG--------QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTI-RVGDITIDTARSL 73 (250)
T ss_pred cEEEeceEEEECC--------eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEE-EECCEEccccccc
Confidence 3789999999963 257889 99999999999999999999999999999999999986 4443
Q ss_pred ------------EeEEEcCCCCCCC-ccHHHHHhcCC----CCCH----HHHHHHHHHhcchHHHHhccCCCcccccCCC
Q 000475 660 ------------KKAYVPQSSWIQT-GTIRENILFGK----DMRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERG 718 (1470)
Q Consensus 660 ------------~~ayv~Q~~~i~~-~Ti~eNI~~g~----~~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g 718 (1470)
.++|++|++.++. .|++||+.++. ..+. ++.++.++..++. ...+..+
T Consensus 74 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~ 142 (250)
T PRK11264 74 SQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLA-----------GKETSYP 142 (250)
T ss_pred cchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-----------chhhCCh
Confidence 3799999988765 79999998742 1121 1222333333332 1234567
Q ss_pred CCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCE
Q 000475 719 INLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGK 796 (1470)
Q Consensus 719 ~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~ 796 (1470)
.+||||||||++||||+..+|+++||||||++||+.+...+.+ ++..+. +++|+|++||+++++.. ||+|++|++|+
T Consensus 143 ~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 221 (250)
T PRK11264 143 RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLN-TIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGR 221 (250)
T ss_pred hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 8999999999999999999999999999999999999887765 454443 47899999999999875 99999999999
Q ss_pred EEEecChhhHHh
Q 000475 797 IEQSGKYEDLIA 808 (1470)
Q Consensus 797 i~~~g~~~~l~~ 808 (1470)
+++.|+.+++.+
T Consensus 222 i~~~~~~~~~~~ 233 (250)
T PRK11264 222 IVEQGPAKALFA 233 (250)
T ss_pred EEEeCCHHHHhc
Confidence 999999988765
No 480
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=318.86 Aligned_cols=202 Identities=25% Similarity=0.373 Sum_probs=164.3
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCC-----CCcEEEECC----
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRI-----SGAAIKVHG---- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~-----~G~~i~~~g---- 659 (1470)
.++++|++|+|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++|. +|++ .++|
T Consensus 4 ~l~~~~l~~~~~~--------~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v-~~~g~~~~ 74 (251)
T PRK14249 4 KIKIRGVNFFYHK--------HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAV-LLDNENIY 74 (251)
T ss_pred eEEEEEEEEEECC--------eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEE-EECCEEcc
Confidence 5889999999963 357889 9999999999999999999999999999999987 5875 4432
Q ss_pred -----------EeEEEcCCCCCCCccHHHHHhcCCCC----CHH----HHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~eNI~~g~~~----~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
.++|++|++.+++.|++||+.++... .++ +.+++++..++.+.++ ...+..+.+
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~ 147 (251)
T PRK14249 75 SPNLDVVNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLA 147 (251)
T ss_pred ccccChHHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCccc
Confidence 47999999998888999999986432 111 1222233333322221 234577889
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEE
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~ 799 (1470)
|||||||||+||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||+|++|++|++.+
T Consensus 148 LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~ 226 (251)
T PRK14249 148 LSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEE-LMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVE 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEE
Confidence 99999999999999999999999999999999999887765 56555567999999999999876 89999999999999
Q ss_pred ecChhhHHh
Q 000475 800 SGKYEDLIA 808 (1470)
Q Consensus 800 ~g~~~~l~~ 808 (1470)
.|+.+++..
T Consensus 227 ~~~~~~~~~ 235 (251)
T PRK14249 227 YGRTGEIFS 235 (251)
T ss_pred eCCHHHHHh
Confidence 999988765
No 481
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-33 Score=311.86 Aligned_cols=188 Identities=27% Similarity=0.403 Sum_probs=154.2
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
|+++|++++|+.. . .+ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 1 i~~~~l~~~~~~~--------~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i-~~~g~~~~~~~~~~ 69 (211)
T cd03298 1 VRLDKIRFSYGEQ--------P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRV-LINGVDVTAAPPAD 69 (211)
T ss_pred CEEEeEEEEeCCE--------e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEEcCcCCHhH
Confidence 4688999998632 1 26 99999999999999999999999999999999999987 6766
Q ss_pred -EeEEEcCCCCCCC-ccHHHHHhcCCCC-------CHHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHH
Q 000475 660 -KKAYVPQSSWIQT-GTIRENILFGKDM-------RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQ 730 (1470)
Q Consensus 660 -~~ayv~Q~~~i~~-~Ti~eNI~~g~~~-------~~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 730 (1470)
.++|++|++.++. .|++||+.++... ++++.+++++.+++.+.. .....+||||||||++
T Consensus 70 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~ 138 (211)
T cd03298 70 RPVSMLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLE-----------KRLPGELSGGERQRVA 138 (211)
T ss_pred ccEEEEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHH-----------hCCcccCCHHHHHHHH
Confidence 3799999998876 5999999876421 123344555555554333 2445689999999999
Q ss_pred HHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000475 731 LARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1470)
Q Consensus 731 LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 801 (1470)
||||++.+|+++||||||++||+++...+.+ ++..+. .++|+|++||+++++.. ||+|++|++|++++.|
T Consensus 139 ia~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 139 LARVLVRDKPVLLLDEPFAALDPALRAEMLD-LVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999887765 454443 37899999999999876 9999999999998654
No 482
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.5e-33 Score=318.78 Aligned_cols=197 Identities=22% Similarity=0.327 Sum_probs=162.5
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 3 i~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i-~~~g~~~~~~~~~~ 73 (242)
T TIGR03411 3 LYLEGLSVSFDG--------FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSV-LFGGTDLTGLPEHQ 73 (242)
T ss_pred EEEEeeEEEcCC--------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeE-EECCeecCCCCHHH
Confidence 789999999963 257888 99999999999999999999999999999999999986 6654
Q ss_pred ----EeEEEcCCCCCCCc-cHHHHHhcCCCCC---------------HHHHHHHHHHhcchHHHHhccCCCcccccCCCC
Q 000475 660 ----KKAYVPQSSWIQTG-TIRENILFGKDMR---------------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGI 719 (1470)
Q Consensus 660 ----~~ayv~Q~~~i~~~-Ti~eNI~~g~~~~---------------~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~ 719 (1470)
.++|++|++.++.. |++||+.++...+ +++.++.++..++ .........
T Consensus 74 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~ 142 (242)
T TIGR03411 74 IARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGL-----------ADEADRLAG 142 (242)
T ss_pred HHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCC-----------chhhcCChh
Confidence 27899999988765 9999998864211 1122222222222 223456778
Q ss_pred CCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEE
Q 000475 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1470)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~ 798 (1470)
+||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++++.. ||+|++|++|+++
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~ 221 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAE-LLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVL 221 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHH-HHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEE
Confidence 999999999999999999999999999999999999887765 56555557899999999999875 9999999999999
Q ss_pred EecChhhHHh
Q 000475 799 QSGKYEDLIA 808 (1470)
Q Consensus 799 ~~g~~~~l~~ 808 (1470)
+.|+++++..
T Consensus 222 ~~~~~~~~~~ 231 (242)
T TIGR03411 222 AEGSLDQVQA 231 (242)
T ss_pred eeCCHHHHhc
Confidence 9999888754
No 483
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-33 Score=318.87 Aligned_cols=202 Identities=24% Similarity=0.325 Sum_probs=163.3
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcC-----CCCcEEEECC----
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG---- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g---- 659 (1470)
.++++|++++|++ .+.+++ ||++++||+++|+|+||||||||+++|+|+++| ++|++ .++|
T Consensus 3 ~l~~~~l~~~~~~--------~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i-~~~g~~i~ 73 (250)
T PRK14247 3 KIEIRDLKVSFGQ--------VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEV-YLDGQDIF 73 (250)
T ss_pred eEEEEeeEEEECC--------eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEE-EECCEECC
Confidence 4789999999963 257888 999999999999999999999999999999974 68986 6655
Q ss_pred ---------EeEEEcCCCCC-CCccHHHHHhcCCCC-----CH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 660 ---------KKAYVPQSSWI-QTGTIRENILFGKDM-----RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 ---------~~ayv~Q~~~i-~~~Ti~eNI~~g~~~-----~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
.++|++|++.+ ++.|++||+.++... .. ++.+++++.+++.+.++ ...+....+
T Consensus 74 ~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 146 (250)
T PRK14247 74 KMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK-------DRLDAPAGK 146 (250)
T ss_pred cCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCCccc
Confidence 36999999875 568999999876421 11 12233444444432111 123466789
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEE
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQ 799 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~ 799 (1470)
|||||||||+||||+.++|++++|||||++||+.+...+.+ ++..+.+++|+|++||+++++. .||+|++|++|++.+
T Consensus 147 LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 225 (250)
T PRK14247 147 LSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIES-LFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVE 225 (250)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEE
Confidence 99999999999999999999999999999999999888765 4555556799999999999986 499999999999999
Q ss_pred ecChhhHHh
Q 000475 800 SGKYEDLIA 808 (1470)
Q Consensus 800 ~g~~~~l~~ 808 (1470)
.|+.+++.+
T Consensus 226 ~g~~~~~~~ 234 (250)
T PRK14247 226 WGPTREVFT 234 (250)
T ss_pred ECCHHHHHc
Confidence 999988865
No 484
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.3e-33 Score=314.67 Aligned_cols=191 Identities=30% Similarity=0.380 Sum_probs=154.1
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+... ...+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 2 l~~~~v~~~~~~~~----~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i-~~~g~~~~~~~~~~ 76 (221)
T TIGR02211 2 LKCENLGKRYQEGK----LDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEV-LFNGQSLSKLSSNE 76 (221)
T ss_pred EEEEeeeEEccCCC----cceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEE-EECCEEhhhcCHhH
Confidence 67899999996420 12357888 99999999999999999999999999999999999986 5553
Q ss_pred -------EeEEEcCCCCCCC-ccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchH
Q 000475 660 -------KKAYVPQSSWIQT-GTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1470)
Q Consensus 660 -------~~ayv~Q~~~i~~-~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 724 (1470)
.++|++|++.++. .|++||+.++.. .+. ++..++++.+++.+ .......+||||
T Consensus 77 ~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G 145 (221)
T TIGR02211 77 RAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEH-----------RINHRPSELSGG 145 (221)
T ss_pred HHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHH
Confidence 3799999988774 699999987421 221 22333444444332 234566789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhhcCEEEEEeCCEEE
Q 000475 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDAADLVLVMKDGKIE 798 (1470)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~~d~i~~l~~G~i~ 798 (1470)
||||++||||++.+|+++||||||++||+++...+.+ ++..+. .++|+|++||+++++..+|+|++|++|+++
T Consensus 146 ~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 146 ERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFD-LMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999999887765 454443 378999999999998889999999999875
No 485
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-33 Score=319.84 Aligned_cols=203 Identities=24% Similarity=0.375 Sum_probs=166.8
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCc-----CCCCcEEEECC---
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKVHG--- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~~g--- 659 (1470)
..++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|..+ |++|++ .++|
T Consensus 9 ~~l~i~~v~~~~~~--------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i-~~~g~~i 79 (264)
T PRK14243 9 TVLRTENLNVYYGS--------FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKV-TFHGKNL 79 (264)
T ss_pred eEEEEeeeEEEECC--------EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEE-EECCEEc
Confidence 35899999999963 257889 99999999999999999999999999999875 378986 5544
Q ss_pred ------------EeEEEcCCCCCCCccHHHHHhcCCCCC------HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCC
Q 000475 660 ------------KKAYVPQSSWIQTGTIRENILFGKDMR------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINL 721 (1470)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~eNI~~g~~~~------~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~L 721 (1470)
.++|++|++.+++.|++||+.++.... +++.+++++.+++..++.. ..+..+.+|
T Consensus 80 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~L 152 (264)
T PRK14243 80 YAPDVDPVEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSL 152 (264)
T ss_pred cccccChHHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccC
Confidence 379999999988789999999864321 1233444555555443321 235678899
Q ss_pred chHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEe-------
Q 000475 722 SGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMK------- 793 (1470)
Q Consensus 722 SGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~------- 793 (1470)
|||||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|||++||+++++.. ||+|++|+
T Consensus 153 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~ 231 (264)
T PRK14243 153 SGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEE-LMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGG 231 (264)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeccccccc
Confidence 9999999999999999999999999999999999887765 56555557899999999999875 99999998
Q ss_pred --CCEEEEecChhhHHh
Q 000475 794 --DGKIEQSGKYEDLIA 808 (1470)
Q Consensus 794 --~G~i~~~g~~~~l~~ 808 (1470)
+|++++.|+.+++..
T Consensus 232 ~~~g~i~~~~~~~~~~~ 248 (264)
T PRK14243 232 GRYGYLVEFDRTEKIFN 248 (264)
T ss_pred ccCceEEEeCCHHHHHh
Confidence 899999999999875
No 486
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-33 Score=320.16 Aligned_cols=198 Identities=19% Similarity=0.336 Sum_probs=161.6
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE--------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------- 660 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------- 660 (1470)
.++++|+++.|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|.
T Consensus 5 ~l~~~~l~~~~~~--------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~ 75 (255)
T PRK11300 5 LLSVSGLMMRFGG--------LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTI-LLRGQHIEGLPGH 75 (255)
T ss_pred eEEEeeEEEEECC--------EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceE-EECCEECCCCCHH
Confidence 5899999999963 357889 99999999999999999999999999999999999986 66652
Q ss_pred ------eEEEcCCCCCCC-ccHHHHHhcCCCC----------------C---H---HHHHHHHHHhcchHHHHhccCCCc
Q 000475 661 ------KAYVPQSSWIQT-GTIRENILFGKDM----------------R---Q---SFYEEVLEGCALNQDIEMWADGDL 711 (1470)
Q Consensus 661 ------~ayv~Q~~~i~~-~Ti~eNI~~g~~~----------------~---~---~~y~~v~~~~~l~~d~~~l~~g~~ 711 (1470)
++|++|++.++. .|++||+.++... + . ++.++.++..++ .
T Consensus 76 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~ 144 (255)
T PRK11300 76 QIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGL-----------L 144 (255)
T ss_pred HHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCCh-----------h
Confidence 588999998876 5999999986310 0 0 111222222222 2
Q ss_pred ccccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhhh-cCE
Q 000475 712 SVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADL 788 (1470)
Q Consensus 712 t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~d~ 788 (1470)
...+.+..+||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+. + ++|+|++||+++++.. ||+
T Consensus 145 ~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~L~~~~~~~~~tii~~sH~~~~~~~~~d~ 223 (255)
T PRK11300 145 EHANRQAGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDE-LIAELRNEHNVTVLLIEHDMKLVMGISDR 223 (255)
T ss_pred hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHH-HHHHHHhhcCCEEEEEeCCHHHHHHhCCE
Confidence 23457788999999999999999999999999999999999999887765 444443 3 7899999999999865 999
Q ss_pred EEEEeCCEEEEecChhhHHh
Q 000475 789 VLVMKDGKIEQSGKYEDLIA 808 (1470)
Q Consensus 789 i~~l~~G~i~~~g~~~~l~~ 808 (1470)
+++|++|++++.|+.+++..
T Consensus 224 i~~l~~g~i~~~~~~~~~~~ 243 (255)
T PRK11300 224 IYVVNQGTPLANGTPEEIRN 243 (255)
T ss_pred EEEEECCeEEecCCHHHHhh
Confidence 99999999999999888754
No 487
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-33 Score=319.89 Aligned_cols=197 Identities=25% Similarity=0.401 Sum_probs=162.3
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|++ .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 3 l~~~~l~~~~~~--------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 73 (255)
T PRK11231 3 LRTENLTVGYGT--------KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTV-FLGDKPISMLSSRQ 73 (255)
T ss_pred EEEEeEEEEECC--------EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEE-EECCEEhHHCCHHH
Confidence 789999999963 357889 99999999999999999999999999999999999986 6665
Q ss_pred ---EeEEEcCCCCCCCc-cHHHHHhcCCC-----C---C---HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchH
Q 000475 660 ---KKAYVPQSSWIQTG-TIRENILFGKD-----M---R---QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1470)
Q Consensus 660 ---~~ayv~Q~~~i~~~-Ti~eNI~~g~~-----~---~---~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 724 (1470)
.++|++|++.++.. |+.||+.++.. + . .++.+++++.+++.+. .......||||
T Consensus 74 ~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G 142 (255)
T PRK11231 74 LARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHL-----------ADRRLTDLSGG 142 (255)
T ss_pred HhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHH-----------HcCCcccCCHH
Confidence 27999999877654 99999998631 1 1 1223344444444322 33567899999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecC
Q 000475 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1470)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~ 802 (1470)
||||++||||+..+|+++||||||++||+.+...+.+ .+..+. +++|+|++||+++.+.. ||+|++|++|++...|+
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 221 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMR-LMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGT 221 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcC
Confidence 9999999999999999999999999999999877765 444443 47999999999999865 99999999999999999
Q ss_pred hhhHHh
Q 000475 803 YEDLIA 808 (1470)
Q Consensus 803 ~~~l~~ 808 (1470)
++++..
T Consensus 222 ~~~~~~ 227 (255)
T PRK11231 222 PEEVMT 227 (255)
T ss_pred HHHhcC
Confidence 888754
No 488
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.6e-33 Score=316.04 Aligned_cols=197 Identities=27% Similarity=0.454 Sum_probs=160.1
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|+++.|+. .+.+++ ||++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~~ 71 (230)
T TIGR03410 1 LEVSNLNVYYGQ--------SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSI-RLDGEDITKLPPHE 71 (230)
T ss_pred CEEEeEEEEeCC--------eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEE-EECCEECCCCCHHH
Confidence 468899999963 357889 99999999999999999999999999999999999986 6654
Q ss_pred ----EeEEEcCCCCCCCc-cHHHHHhcCCCCC----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHHHH
Q 000475 660 ----KKAYVPQSSWIQTG-TIRENILFGKDMR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQ 730 (1470)
Q Consensus 660 ----~~ayv~Q~~~i~~~-Ti~eNI~~g~~~~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 730 (1470)
.++|++|++.++.. |++||+.++.... .+.++++++..+. .....+....+||||||||++
T Consensus 72 ~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~----------l~~~~~~~~~~LS~G~~qrv~ 141 (230)
T TIGR03410 72 RARAGIAYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV----------LKEMLGRRGGDLSGGQQQQLA 141 (230)
T ss_pred HHHhCeEEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh----------HHHHhhCChhhCCHHHHHHHH
Confidence 37999999988764 9999998764221 1222333332221 112235677899999999999
Q ss_pred HHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhhHH
Q 000475 731 LARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLI 807 (1470)
Q Consensus 731 LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 807 (1470)
||||++++|+++||||||++||+.+...+.+ .+..+. .++|+|++||+++++.. ||+|+++++|++++.|+.+++.
T Consensus 142 la~al~~~p~illlDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 142 IARALVTRPKLLLLDEPTEGIQPSIIKDIGR-VIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999999999999887765 454443 27899999999999885 9999999999999999988873
No 489
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-33 Score=318.11 Aligned_cols=202 Identities=24% Similarity=0.372 Sum_probs=164.2
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcC-----CCCcEEEECC----
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG---- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g---- 659 (1470)
.++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|..++ ++|++ .++|
T Consensus 3 ~l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i-~~~g~~~~ 73 (250)
T PRK14240 3 KISVKDLDLFYGD--------FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEV-LLDGQDIY 73 (250)
T ss_pred eEEEEEEEEEECC--------ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEE-EECCEEcc
Confidence 4789999999963 257888 999999999999999999999999999998763 68986 5554
Q ss_pred -----------EeEEEcCCCCCCCccHHHHHhcCCCC----C----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----R----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~eNI~~g~~~----~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
.++|++|++.+++.|++||+.++... . .++.+++++.+++.+++. ...+..+.+
T Consensus 74 ~~~~~~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~ 146 (250)
T PRK14240 74 KSDIDVNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALG 146 (250)
T ss_pred ccccchHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCC
Confidence 37999999988889999999986421 1 122233344444433222 234567789
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEE
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~ 799 (1470)
||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||+|++|++|++++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~ 225 (250)
T PRK14240 147 LSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEE-LIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVE 225 (250)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999887754 56555567899999999998765 99999999999999
Q ss_pred ecChhhHHh
Q 000475 800 SGKYEDLIA 808 (1470)
Q Consensus 800 ~g~~~~l~~ 808 (1470)
.|+.+++..
T Consensus 226 ~~~~~~~~~ 234 (250)
T PRK14240 226 FGDTVDLFT 234 (250)
T ss_pred eCCHHHHHh
Confidence 999888765
No 490
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-33 Score=322.62 Aligned_cols=201 Identities=27% Similarity=0.453 Sum_probs=164.9
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1470)
..++++|++++|+.. ..+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 6 ~~l~~~nl~~~~~~~------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I-~~~g~~i~~~~~ 78 (271)
T PRK13632 6 VMIKVENVSFSYPNS------ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEI-KIDGITISKENL 78 (271)
T ss_pred eEEEEEeEEEEcCCC------CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-EECCEecCcCCH
Confidence 358999999999632 2457889 99999999999999999999999999999999999986 6654
Q ss_pred -----EeEEEcCCC--CCCCccHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 660 -----KKAYVPQSS--WIQTGTIRENILFGKD---MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 660 -----~~ayv~Q~~--~i~~~Ti~eNI~~g~~---~~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
.++|++|+| .+++.|++|||.++.. ++.+ +.+++++..++.+. .+.+..+|||||
T Consensus 79 ~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~ 147 (271)
T PRK13632 79 KEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDY-----------LDKEPQNLSGGQ 147 (271)
T ss_pred HHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCCcccCCHHH
Confidence 369999998 3567899999998632 2222 23344444554332 345668999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEcCCcchhhhcCEEEEEeCCEEEEecCh
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKY 803 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~ 803 (1470)
|||++||||++.+|+++||||||++||+.+...+++ .+..+. + ++|+|++||+++.+..||+|++|++|++.+.|+.
T Consensus 148 ~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~ 226 (271)
T PRK13632 148 KQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKK-IMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKP 226 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCH
Confidence 999999999999999999999999999999888876 454443 3 4899999999998878999999999999999998
Q ss_pred hhHHh
Q 000475 804 EDLIA 808 (1470)
Q Consensus 804 ~~l~~ 808 (1470)
+++..
T Consensus 227 ~~~~~ 231 (271)
T PRK13632 227 KEILN 231 (271)
T ss_pred HHHhc
Confidence 88764
No 491
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-33 Score=326.17 Aligned_cols=205 Identities=24% Similarity=0.346 Sum_probs=162.1
Q ss_pred ccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--------
Q 000475 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1470)
Q Consensus 589 ~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1470)
..++++|++++|+.... ...+.+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 5 ~~l~i~nl~~~~~~~~~---~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~i~~~~~ 80 (289)
T PRK13645 5 KDIILDNVSYTYAKKTP---FEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQT-IVGDYAIPANLK 80 (289)
T ss_pred ceEEEEEEEEEeCCCCc---cccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-EECCEEcccccc
Confidence 35899999999964300 01357899 99999999999999999999999999999999999986 5543
Q ss_pred ----------EeEEEcCCCC--CCCccHHHHHhcCCCC---CHH----HHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 660 ----------KKAYVPQSSW--IQTGTIRENILFGKDM---RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 ----------~~ayv~Q~~~--i~~~Ti~eNI~~g~~~---~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
.++|++|+|. +++.|++||+.|+... ..+ +.+++++..++.. ...+....+
T Consensus 81 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~----------~~~~~~~~~ 150 (289)
T PRK13645 81 KIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPE----------DYVKRSPFE 150 (289)
T ss_pred ccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hHhcCChhh
Confidence 3699999984 5678999999986421 111 1122233222211 123466789
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEE
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i 797 (1470)
||||||||++||||++.+|+++||||||++||+.+...+++ ++..+. .++|+|++||+++.+.. ||+|++|++|++
T Consensus 151 LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i 229 (289)
T PRK13645 151 LSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFIN-LFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKV 229 (289)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999877765 454443 37899999999998765 999999999999
Q ss_pred EEecChhhHHh
Q 000475 798 EQSGKYEDLIA 808 (1470)
Q Consensus 798 ~~~g~~~~l~~ 808 (1470)
++.|+.+++..
T Consensus 230 ~~~g~~~~~~~ 240 (289)
T PRK13645 230 ISIGSPFEIFS 240 (289)
T ss_pred EEeCCHHHHhc
Confidence 99999888754
No 492
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=1.9e-33 Score=315.46 Aligned_cols=193 Identities=27% Similarity=0.341 Sum_probs=157.4
Q ss_pred EEEEeEEEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEcCEeCCCCCHHHHhcccEE
Q 000475 1220 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1299 (1470)
Q Consensus 1220 I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~isi 1299 (1470)
+.++|++.+|+. +++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++... .....
T Consensus 23 l~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~-----~~~~~- 94 (224)
T cd03220 23 LGILGRKGEVGE--FWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSLL-----GLGGG- 94 (224)
T ss_pred hhhhhhhhhcCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchhh-----ccccc-
Confidence 678888888865 4699999999999999999999999999999999999999999999999986421 11111
Q ss_pred EccCCCCCcccHHHhcCcC---CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHHc
Q 000475 1300 IPQDPMLFQGTVRTNLDPL---EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLL 1372 (1470)
Q Consensus 1300 IpQdp~LF~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL 1372 (1470)
+..+.|+++|+... ...+. +++.++++..++.+. ++..+ ..||+|||||++||||++
T Consensus 95 -----~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LSgG~~qrv~laral~ 158 (224)
T cd03220 95 -----FNPELTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDF-------IDLPV----KTYSSGMKARLAFAIATA 158 (224)
T ss_pred -----CCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-------hhCCh----hhCCHHHHHHHHHHHHHh
Confidence 22356999998532 11222 235556666666443 34444 469999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000475 1373 KKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1436 (1470)
Q Consensus 1373 r~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHRl~ti~~-~DrIlvL~~G~vvE~g 1436 (1470)
++|++|||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|
T Consensus 159 ~~p~llllDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 159 LEPDILLIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999998764 46899999999999865 9999999999998865
No 493
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-33 Score=318.18 Aligned_cols=197 Identities=26% Similarity=0.436 Sum_probs=162.7
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECCE---------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK--------- 660 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~--------- 660 (1470)
++++|++++|+. ...+++ ||++++|++++|+|+||||||||+++|+|+.+|++|++ .++|.
T Consensus 3 l~~~~l~~~~~~--------~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i-~~~g~~~~~~~~~~ 73 (258)
T PRK13548 3 LEARNLSVRLGG--------RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEV-RLNGRPLADWSPAE 73 (258)
T ss_pred EEEEeEEEEeCC--------eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEE-EECCEEcccCCHHH
Confidence 788999999963 357889 99999999999999999999999999999999999986 66652
Q ss_pred ----eEEEcCCCCC-CCccHHHHHhcCCC-CC------HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHHHHH
Q 000475 661 ----KAYVPQSSWI-QTGTIRENILFGKD-MR------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQR 728 (1470)
Q Consensus 661 ----~ayv~Q~~~i-~~~Ti~eNI~~g~~-~~------~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 728 (1470)
++|++|++.+ ++.|++||+.++.. .. +++.+++++..++.. ..+....+||||||||
T Consensus 74 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGe~qr 142 (258)
T PRK13548 74 LARRRAVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAH-----------LAGRDYPQLSGGEQQR 142 (258)
T ss_pred hhhheEEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHh-----------HhcCCcccCCHHHHHH
Confidence 6899999877 67899999988642 11 122344444444432 2235678999999999
Q ss_pred HHHHHHHc------cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEE
Q 000475 729 IQLARAVY------SNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQ 799 (1470)
Q Consensus 729 v~LARAl~------~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~ 799 (1470)
++||||++ .+|+++||||||++||+.+...+.+ ++..+. +++|||++||+++.+. .||+|++|++|++++
T Consensus 143 v~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 221 (258)
T PRK13548 143 VQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLR-LARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVA 221 (258)
T ss_pred HHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEe
Confidence 99999999 5999999999999999999887765 455443 4789999999999987 499999999999999
Q ss_pred ecChhhHHh
Q 000475 800 SGKYEDLIA 808 (1470)
Q Consensus 800 ~g~~~~l~~ 808 (1470)
.|+++++..
T Consensus 222 ~~~~~~~~~ 230 (258)
T PRK13548 222 DGTPAEVLT 230 (258)
T ss_pred eCCHHHHhC
Confidence 999888764
No 494
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.3e-33 Score=313.07 Aligned_cols=187 Identities=28% Similarity=0.389 Sum_probs=152.5
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+.. ...+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~~-------~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~i~~~~~~~ 72 (214)
T cd03292 1 IEFINVTKTYPNG-------TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTI-RVNGQDVSDLRGRA 72 (214)
T ss_pred CEEEEEEEEeCCC-------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEE-EECCEEcccCCHHH
Confidence 4678999999632 357888 99999999999999999999999999999999999986 5654
Q ss_pred ------EeEEEcCCCCCCC-ccHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 660 ------KKAYVPQSSWIQT-GTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~eNI~~g~~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
.++|++|++.++. .|++||+.++.. ... ++.++.++.+++.+. ......+|||||
T Consensus 73 ~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~ 141 (214)
T cd03292 73 IPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHK-----------HRALPAELSGGE 141 (214)
T ss_pred HHHHHHheEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCChhhcCHHH
Confidence 3799999998776 699999987632 111 233444555555432 234557899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEE
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i 797 (1470)
|||++||||++.+|+++||||||++||+++...+.+. +..+ .+++|+|++||+++.+.. ||+|++|++|++
T Consensus 142 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~-l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 142 QQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNL-LKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999998877654 4444 357999999999999875 999999999974
No 495
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-33 Score=319.24 Aligned_cols=202 Identities=24% Similarity=0.331 Sum_probs=162.8
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcC-----CCCcEEEECC----
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG---- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g---- 659 (1470)
.++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|+++| ++|++ .++|
T Consensus 4 ~l~~~~l~~~~~~--------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i-~~~g~~i~ 74 (253)
T PRK14267 4 AIETVNLRVYYGS--------NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEV-RLFGRNIY 74 (253)
T ss_pred eEEEEeEEEEeCC--------eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEE-EECCEEcc
Confidence 4789999999963 357889 999999999999999999999999999999987 48986 5543
Q ss_pred -----------EeEEEcCCCCCCC-ccHHHHHhcCCCC-----CHH----HHHHHHHHhcchHHHHhccCCCcccccCCC
Q 000475 660 -----------KKAYVPQSSWIQT-GTIRENILFGKDM-----RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERG 718 (1470)
Q Consensus 660 -----------~~ayv~Q~~~i~~-~Ti~eNI~~g~~~-----~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g 718 (1470)
.++|++|++.++. .|++||+.++... ..+ +.+++++..++..+++ ...+...
T Consensus 75 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~ 147 (253)
T PRK14267 75 SPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYP 147 (253)
T ss_pred ccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccCh
Confidence 3699999998876 5999999875321 111 1223333333322221 1245677
Q ss_pred CCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEE
Q 000475 719 INLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1470)
Q Consensus 719 ~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i 797 (1470)
.+||||||||++||||++++|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++++.. ||+|++|++|++
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i 226 (253)
T PRK14267 148 SNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEE-LLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKL 226 (253)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEE
Confidence 8999999999999999999999999999999999999887765 45555557999999999999765 999999999999
Q ss_pred EEecChhhHHh
Q 000475 798 EQSGKYEDLIA 808 (1470)
Q Consensus 798 ~~~g~~~~l~~ 808 (1470)
++.|+.+++.+
T Consensus 227 ~~~~~~~~~~~ 237 (253)
T PRK14267 227 IEVGPTRKVFE 237 (253)
T ss_pred EEeCCHHHHHh
Confidence 99999988865
No 496
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-33 Score=335.40 Aligned_cols=209 Identities=24% Similarity=0.362 Sum_probs=165.6
Q ss_pred cEEEeeeEEEeCCCccc----------------cCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCC
Q 000475 590 AIDIEAGEYAWDAREEN----------------FKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISG 652 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~----------------~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G 652 (1470)
.|+++|++..|.+.... .....+.+++ ||++++||+++|+||||||||||+++|+|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 47777777777553210 0012346888 999999999999999999999999999999999999
Q ss_pred cEEEECC-----------------EeEEEcCCCCCCC-ccHHHHHhcCCCC---CH----HHHHHHHHHhcchHHHHhcc
Q 000475 653 AAIKVHG-----------------KKAYVPQSSWIQT-GTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWA 707 (1470)
Q Consensus 653 ~~i~~~g-----------------~~ayv~Q~~~i~~-~Ti~eNI~~g~~~---~~----~~y~~v~~~~~l~~d~~~l~ 707 (1470)
++ .++| .++||+|++.++. .|++|||.++... +. ++..++++.++|.+.
T Consensus 84 ~I-~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~----- 157 (400)
T PRK10070 84 QV-LIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENY----- 157 (400)
T ss_pred EE-EECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChh-----
Confidence 86 6654 4799999998875 6999999986432 21 233445555555432
Q ss_pred CCCcccccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-
Q 000475 708 DGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA- 785 (1470)
Q Consensus 708 ~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~- 785 (1470)
......+|||||||||+|||||+.+|+++||||||++||+.+...+.+.+..... .++|+|+|||+++++..
T Consensus 158 ------~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~ 231 (400)
T PRK10070 158 ------AHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRI 231 (400)
T ss_pred ------hhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHh
Confidence 2345679999999999999999999999999999999999998888764433222 47999999999998764
Q ss_pred cCEEEEEeCCEEEEecChhhHHhhc
Q 000475 786 ADLVLVMKDGKIEQSGKYEDLIADQ 810 (1470)
Q Consensus 786 ~d~i~~l~~G~i~~~g~~~~l~~~~ 810 (1470)
||+|++|++|++++.|+++++...+
T Consensus 232 ~Dri~vL~~G~i~~~g~~~~l~~~~ 256 (400)
T PRK10070 232 GDRIAIMQNGEVVQVGTPDEILNNP 256 (400)
T ss_pred CCEEEEEECCEEEecCCHHHHHhCc
Confidence 9999999999999999999987643
No 497
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-33 Score=316.38 Aligned_cols=198 Identities=26% Similarity=0.362 Sum_probs=160.5
Q ss_pred cEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC---------
Q 000475 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1470)
Q Consensus 590 ~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1470)
.++++|++++|+. ...+++ ||++++||+++|+||||||||||+++|+|..+|++|++ .++|
T Consensus 2 ~l~~~~l~~~~~~--------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~ 72 (242)
T PRK11124 2 SIQLNGINCFYGA--------HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTL-NIAGNHFDFSKTP 72 (242)
T ss_pred EEEEEeeEEEECC--------eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEeccccccc
Confidence 3788999999963 257889 99999999999999999999999999999999999986 5654
Q ss_pred ----------EeEEEcCCCCCCC-ccHHHHHhcCC-C---CCH----HHHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 660 ----------KKAYVPQSSWIQT-GTIRENILFGK-D---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 ----------~~ayv~Q~~~i~~-~Ti~eNI~~g~-~---~~~----~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
.++|++|++.++. .|++|||.++. + ... ++..+.++..++. ...+....+
T Consensus 73 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~ 141 (242)
T PRK11124 73 SDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLK-----------PYADRFPLH 141 (242)
T ss_pred chhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-----------hhhhCChhh
Confidence 3699999998775 59999997431 1 111 1222233333332 234456679
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEE
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~ 798 (1470)
||||||||++||||++.+|+++||||||++||+.+...+.+ +++.+. +++|+|++||+++++.. ||++++|++|+++
T Consensus 142 LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~ 220 (242)
T PRK11124 142 LSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVS-IIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIV 220 (242)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999887765 455443 48999999999999875 9999999999999
Q ss_pred EecChhhHHh
Q 000475 799 QSGKYEDLIA 808 (1470)
Q Consensus 799 ~~g~~~~l~~ 808 (1470)
+.|+++++.+
T Consensus 221 ~~~~~~~~~~ 230 (242)
T PRK11124 221 EQGDASCFTQ 230 (242)
T ss_pred EeCCHHHhcC
Confidence 9999887643
No 498
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.2e-33 Score=327.65 Aligned_cols=217 Identities=22% Similarity=0.352 Sum_probs=169.5
Q ss_pred CccEEEeeeEEEeCCCccc-----cCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC--
Q 000475 588 DVAIDIEAGEYAWDAREEN-----FKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-- 659 (1470)
Q Consensus 588 ~~~i~~~~~~f~w~~~~~~-----~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-- 659 (1470)
+..++++|++++|+..... .......+++ ||++++||+++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I-~~~G~~ 84 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEV-AWLGKD 84 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEE-EECCEE
Confidence 3568999999999642100 0012357888 99999999999999999999999999999999999986 5554
Q ss_pred --------------EeEEEcCCCC--CC-CccHHHHHhcCC-----CCCHH----HHHHHHHHhcchHHHHhccCCCccc
Q 000475 660 --------------KKAYVPQSSW--IQ-TGTIRENILFGK-----DMRQS----FYEEVLEGCALNQDIEMWADGDLSV 713 (1470)
Q Consensus 660 --------------~~ayv~Q~~~--i~-~~Ti~eNI~~g~-----~~~~~----~y~~v~~~~~l~~d~~~l~~g~~t~ 713 (1470)
.++||+|+|. ++ ..||.|||.++. ..+.+ +.+++++..++.++ .
T Consensus 85 i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~----------~ 154 (331)
T PRK15079 85 LLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPN----------L 154 (331)
T ss_pred CCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChH----------H
Confidence 4799999983 44 579999997642 12322 22344444444322 2
Q ss_pred ccCCCCCCchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEE
Q 000475 714 VGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVL 790 (1470)
Q Consensus 714 ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~ 790 (1470)
.+..+.+|||||||||+|||||+.+|+++|+||||++||+.+...+.+. ++.+. .+.|+|+||||++.+.. ||+|+
T Consensus 155 ~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~l-L~~l~~~~~~til~iTHdl~~~~~~~dri~ 233 (331)
T PRK15079 155 INRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNL-LQQLQREMGLSLIFIAHDLAVVKHISDRVL 233 (331)
T ss_pred hcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEE
Confidence 3456789999999999999999999999999999999999998888764 44443 37899999999999875 99999
Q ss_pred EEeCCEEEEecChhhHHhhchhHHHH
Q 000475 791 VMKDGKIEQSGKYEDLIADQNSELVR 816 (1470)
Q Consensus 791 ~l~~G~i~~~g~~~~l~~~~~~~~~~ 816 (1470)
+|++|+|++.|+.+++.++....+..
T Consensus 234 vl~~G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 234 VMYLGHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred EEECCEEEEEcCHHHHHcCCCCHHHH
Confidence 99999999999999988644434433
No 499
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-33 Score=320.10 Aligned_cols=201 Identities=20% Similarity=0.292 Sum_probs=165.2
Q ss_pred CCccEEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC------
Q 000475 587 SDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------ 659 (1470)
Q Consensus 587 ~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------ 659 (1470)
+...++++|++++|+. ...+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 4 ~~~~l~i~~l~~~~~~--------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i-~~~g~~~~~~ 74 (265)
T PRK10253 4 SVARLRGEQLTLGYGK--------YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHV-WLDGEHIQHY 74 (265)
T ss_pred cccEEEEEEEEEEECC--------EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEE-EECCEEhhhC
Confidence 3457999999999973 357888 99999999999999999999999999999999999986 6665
Q ss_pred -------EeEEEcCCCCCC-CccHHHHHhcCC-CC-------C---HHHHHHHHHHhcchHHHHhccCCCcccccCCCCC
Q 000475 660 -------KKAYVPQSSWIQ-TGTIRENILFGK-DM-------R---QSFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1470)
Q Consensus 660 -------~~ayv~Q~~~i~-~~Ti~eNI~~g~-~~-------~---~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 720 (1470)
.++|++|++.++ +.|++||+.++. +. . .++.+++++..++.+. ....+.+
T Consensus 75 ~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~ 143 (265)
T PRK10253 75 ASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHL-----------ADQSVDT 143 (265)
T ss_pred CHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHH-----------hcCCccc
Confidence 269999998775 579999998752 11 1 1233344444444322 3456789
Q ss_pred CchHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEcCCcchhhh-cCEEEEEeCCEE
Q 000475 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1470)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i 797 (1470)
||||||||++||||++.+|+++||||||++||+.+...+.+. +..+. .++|+|++||+++.+.. ||+|++|++|++
T Consensus 144 LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~-L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i 222 (265)
T PRK10253 144 LSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLEL-LSELNREKGYTLAAVLHDLNQACRYASHLIALREGKI 222 (265)
T ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999998888764 44443 37899999999998765 999999999999
Q ss_pred EEecChhhHHh
Q 000475 798 EQSGKYEDLIA 808 (1470)
Q Consensus 798 ~~~g~~~~l~~ 808 (1470)
++.|+.+++..
T Consensus 223 ~~~g~~~~~~~ 233 (265)
T PRK10253 223 VAQGAPKEIVT 233 (265)
T ss_pred EEeCCHHHHhh
Confidence 99999888764
No 500
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.2e-33 Score=313.22 Aligned_cols=186 Identities=26% Similarity=0.424 Sum_probs=152.1
Q ss_pred EEEeeeEEEeCCCccccCCCcccccC-ceEeeCCcEEEEEcCCCCChHHHHHHHhCCCcCCCCcEEEECC----------
Q 000475 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1470)
Q Consensus 591 i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1470)
++++|++++|+.+ ...+++ ||++++|++++|+||||||||||+++|+|..+|++|++ .++|
T Consensus 2 l~~~~l~~~~~~~-------~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i-~~~g~~~~~~~~~~ 73 (214)
T TIGR02673 2 IEFHNVSKAYPGG-------VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQV-RIAGEDVNRLRGRQ 73 (214)
T ss_pred EEEEeeeEEeCCC-------ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEEcccCCHHH
Confidence 6789999999522 357889 99999999999999999999999999999999999986 5554
Q ss_pred ------EeEEEcCCCCCCC-ccHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHHhccCCCcccccCCCCCCchHH
Q 000475 660 ------KKAYVPQSSWIQT-GTIRENILFGKD---MR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1470)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~eNI~~g~~---~~----~~~y~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 725 (1470)
.++|++|++.++. .|++||+.++.. .+ +++.++.++..++.+.. .....+|||||
T Consensus 74 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~ 142 (214)
T TIGR02673 74 LPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKA-----------DAFPEQLSGGE 142 (214)
T ss_pred HHHHHhheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHH
Confidence 3699999998875 699999987532 11 23344455555554322 24456899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCE
Q 000475 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGK 796 (1470)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~ 796 (1470)
|||++||||++.+|+++||||||++||+.+...+.+. ++.+. +++|+|++||+++++.. ||+|++|++|+
T Consensus 143 ~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 143 QQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDL-LKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 9999999999999999999999999999998887664 44443 48999999999999876 99999999984
Done!