Query 000475
Match_columns 1470
No_of_seqs 476 out of 5887
Neff 7.4
Searched_HMMs 29240
Date Tue Mar 26 16:54:04 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000475.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_253-257//hhsearch_pdb/000475hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1609.7 115.4 1208 221-1457 1-1317(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1289.4 111.9 1159 272-1460 45-1274(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 760.7 66.5 515 928-1457 137-654 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 721.5 53.9 514 928-1456 109-625 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 692.6 57.8 562 877-1458 25-592 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 688.3 61.8 567 873-1457 7-579 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 669.6 60.3 558 879-1454 4-574 (578)
8 3b60_A Lipid A export ATP-bind 1.0 1 1 665.9 67.7 560 877-1456 13-579 (582)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 663.7 70.9 560 877-1456 13-579 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 659.6 67.2 563 879-1458 9-585 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1609.73 Aligned_cols=1208 Identities=18% Similarity=0.204 Sum_probs=902.8
Q ss_pred HHHHHC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-----------C----CCCHHHHHHHHH-HHHH---HHH
Q ss_conf 998403-4977878899999489499999999999985127-----------9----998679999999-9999---999
Q 000475 221 LFQRGR-IQKLELLHIPPIPQSETANDASSLLEESLRKQKT-----------D----ATSLPQVIIHAV-WKSL---ALN 280 (1470)
Q Consensus 221 l~~~g~-~~~L~~~dl~~l~~~~~~~~~~~~f~~~~~~~~~-----------~----~~~l~~al~~~~-~~~~---~~~ 280 (1470)
+++.|. +++|+..|.+++.|+|..+...+.+++.|..... + ++.-++.||+.- +.+. +++
T Consensus 1 ~~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Lfrya~~~d~~l~~~g 80 (1321)
T 4f4c_A 1 MLRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVSIPQLYRYTTTLEKLLLFIG 80 (1321)
T ss_dssp ---CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCCHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHH
T ss_conf 98773100687635445679501110000113454243554334310012232025687799997315676789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC-------CCC-------CC-CH----H---HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999864-------999-------97-30----6---899999999999999999999999
Q 000475 281 AAFAGVNTIASYIGPFLITNFVSFLS-------GKH-------DH-SS----Y---HYGLVLASVFLFAKTVESLTQRQW 338 (1470)
Q Consensus 281 ~~~~l~~~~~~~~~P~ll~~~i~~~~-------~~~-------~~-~~----~---~~g~~l~~~l~~~~~~~~l~~~~~ 338 (1470)
.+++++..++.-+.++++..+++.+. ... .. .. . ...+.++.+.+...++..+....|
T Consensus 81 ~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~ 160 (1321)
T 4f4c_A 81 TLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCY 160 (1321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997010001454300034431001689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999986011258---9998999999997399999999-9999999999999998999988855
Q 000475 339 YFGANRIGIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFF-LYIHRIWLLPVQVFLALVILYKNLG 414 (1470)
Q Consensus 339 ~~~~~~~g~rir~~L~~~iy~K~l~ls~~---~~~~G~ivnlms~D~~~i~~~~-~~~~~~~~~plqi~i~l~~L~~~lG 414 (1470)
. ..|.|+-..++..+|+|.++++.. .+++|+++|.+++|++++.+++ ..+..++..++.++.++++++ .++
T Consensus 161 ~----~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~-~~~ 235 (1321)
T 4f4c_A 161 L----YVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAF-THS 235 (1321)
T ss_dssp H----HHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHH-HHC
T ss_pred H----HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_conf 9----99999999999999999978898998799848999999999999999999999999999999999999999-998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68999999999999999999999999999999999999999999998004999985519999999999999999999999
Q 000475 415 AAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKY 494 (1470)
Q Consensus 415 ~~a~l~gl~~~~i~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~ 494 (1470)
|..+++.++++++++++...++++..++..+.++..+++.+.++|.++|||+||+|+||+.+.+++.+..+...+...+.
T Consensus 236 ~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 315 (1321)
T 4f4c_A 236 WQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLK 315 (1321)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999839999982142999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999899999999998--999999999999823987789999999999999999999999999999999999999998624
Q 000475 495 LYTCSAIAFLFWASP--TLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKE 572 (1470)
Q Consensus 495 ~~~~a~~~~~~~~~p--~~v~~~tf~~~~~~~~~L~~~~vf~~la~~~~l~~pl~~lp~~i~~~~~a~vS~~Ri~~fL~~ 572 (1470)
....+.......... ..+.+++++.+.+.++.++++.+++++.++..+..|+..++..+..+.++.+|++||.+|++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 395 (1321)
T 4f4c_A 316 GLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDR 395 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999995998699999999999999999998999999999999999999999717
Q ss_pred CCCCCCC--CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCEEEEECCCCCCHHHHHHHHHCCCCC
Q ss_conf 4899998--8889889984189964699807875556788633247-667518939999847999937999888078768
Q 000475 573 DNQKKPI--TEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR 649 (1470)
Q Consensus 573 ~e~~~~~--~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~vaivG~~GsGKStLl~~ilGe~~~ 649 (1470)
++..+.. ...+....+..|+++|++|+|+.. ++.+.|+| ||++++|+++||+|++|||||||+++|+|+++|
T Consensus 396 ~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~-----~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~ 470 (1321)
T 4f4c_A 396 KPVIDSSSKAGRKDMKIKGDITVENVHFTYPSR-----PDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDV 470 (1321)
T ss_dssp SCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSS-----TTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC-----CCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCC
T ss_conf 853456665565677888767999855407999-----987433331886228827899805898577888875456516
Q ss_pred CCCCEEEECC-------------EEEEECCCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCC
Q ss_conf 9884899889-------------7689837777888648999723977-8978999999980321799740178852005
Q 000475 650 ISGAAIKVHG-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVG 715 (1470)
Q Consensus 650 ~~G~vi~~~g-------------~iayv~Q~~wi~~~TIreNIlfg~~-~~~~~y~~vi~~c~L~~di~~lp~Gd~t~iG 715 (1470)
.+|++ .++| .++||+|+||+|++||||||+||+| .+++++.++++.|++++|++.||+||+|+||
T Consensus 471 ~~G~I-~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vG 549 (1321)
T 4f4c_A 471 LKGKI-TIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVG 549 (1321)
T ss_dssp SEEEE-EETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEES
T ss_pred CCCCC-CCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEEC
T ss_conf 44861-57996501125999850466658753320786167886415522099999999875654688708888860755
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECC
Q ss_conf 89987745899999999998249999998276778799999999999997612995899981793215315989999498
Q 000475 716 ERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDG 795 (1470)
Q Consensus 716 e~G~~LSGGQkqRi~LARAly~~~~i~lLDdp~SalD~~~~~~i~~~~i~~~l~~kTvilvTH~~~~l~~~D~I~vl~~G 795 (1470)
|+|.+|||||||||+||||+|+||+|++|||||||||++++ +++++++.+++++||+|+|||+++.++.||+|++|++|
T Consensus 550 e~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te-~~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G 628 (1321)
T 4f4c_A 550 DRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESE-GIVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNG 628 (1321)
T ss_dssp SSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTH-HHHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETT
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH-HHHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECC
T ss_conf 89887777787999999987259998998455446887899-99999999984798899973638789868989996399
Q ss_pred EEEEECCHHHHHHHCHHHHHHHHHHHHHCC-----CCCCCCCCCCCC----CCC----CCCCCCHHHHHCCC-CCCCCCC
Q ss_conf 899940715678520069999999843102-----579999878656----567----66664111110048-8887888
Q 000475 796 KIEQSGKYEDLIADQNSELVRQMKAHRKSL-----DQVNPPQEDKCL----SRV----PCQMSQITEERFAR-PISCGEF 861 (1470)
Q Consensus 796 ~i~~~G~~~el~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~-~~~~~~~ 861 (1470)
+|+++|+|+||++ .++.|.++...+.... .......+.... ..+ +.........+... .......
T Consensus 629 ~ive~Gth~eL~~-~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1321)
T 4f4c_A 629 QVVEVGDHRALMA-QQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSITN 707 (1321)
T ss_dssp EEEEEECHHHHHT-TTCHHHHHHHHHHHHHHHHHHHCC------------------------------------------
T ss_pred EEECCCCHHHHHH-HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
T ss_conf 6513689999998-532799999962212222332334433223211122222342222222110221110132124567
Q ss_pred CCCCCCCHHHCCCCHH---------------HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CCC
Q ss_conf 9898400000175117---------------889999998401268999999999999997435678887401----234
Q 000475 862 SGRSQDEDTELGRVKW---------------TVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATD----EKR 922 (1470)
Q Consensus 862 ~~~~~~e~~~~G~v~~---------------~~y~~y~~~~~g~~~~~~i~~~~~~~~~~~i~~~~wl~~~~~----~~~ 922 (1470)
.....++++..|...+ ..|+.|......+..+.+.+++..+.........+|+..|.+ +..
T Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1321)
T 4f4c_A 708 GPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPA 787 (1321)
T ss_dssp --------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSS
T ss_pred CCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 74025777531540389999999970786310999999987789999999999999999999999999999987517934
Q ss_pred C--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCHHHHHHHHHHCHHHHH
Q ss_conf 4--552202335787565789999999999999999999999999999983487333234--671348999840011101
Q 000475 923 K--VSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDS--TPSSRILNRCSTDQSTVD 998 (1470)
Q Consensus 923 ~--~~~~~~i~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~ap~~ffd~--tp~GrIlnR~s~D~~~id 998 (1470)
. .....+..+|++++++..++.+++.+++...+.+++.++|.+++++++++|++|||+ +|+|+++||+++|+..+|
T Consensus 788 ~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~ 867 (1321)
T 4f4c_A 788 DFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLR 867 (1321)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHH
T ss_conf 55667899999999999999999999999999999999999999998887349933321678884888850250599999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf 10689999999999999999999999867999999999999999988545565677899999999999999835101048
Q 000475 999 TDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPIL 1078 (1470)
Q Consensus 999 ~~i~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~i~ip~~~l~~~~~~~~~~~~~~~l~~~y~~~~r~l~rl~~~~~spi~ 1078 (1470)
..++..+..++..++.+++.++++++++|++.+++++++++.++.. .++.+..+...+......+...
T Consensus 868 ~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 935 (1321)
T 4f4c_A 868 TAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQ------------YLRGRRFTGKNVKSASEFADSG 935 (1321)
T ss_dssp TTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH------------HHHTSCCSSCSTTTSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999998653777702213786899999999888999999------------9999999999999999988898
Q ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCCCCCHH
Q ss_conf 78998550148988603088999999999999877799999675799999999999999999999---976127876988
Q 000475 1079 HHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII---LVTLPRSAIDPS 1155 (1470)
Q Consensus 1079 ~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~---~~~~~~~~~~~~ 1155 (1470)
.++.|++.|+.+||+|++|++|.+++.+..+...+..+.......+.......+..+....+..+ ++......+.++
T Consensus 936 ~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~ 1015 (1321)
T 4f4c_A 936 KIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPM 1015 (1321)
T ss_dssp HHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 89999996279888614148899999999999999999999999999999999999999999987578875376542147
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC-C
Q ss_conf 999999999999999999999999999965179999997339998863347999999999987379996898847998-9
Q 000475 1156 LAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTL-P 1234 (1470)
Q Consensus 1156 ~~gl~lsy~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~-~ 1234 (1470)
.+...+.+.......+.++...+.++++.+.+++|+.++.+.++|.+ +...+++.||..|.|+|+||+|+|+.+. .
T Consensus 1016 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~---~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~ 1092 (1321)
T 4f4c_A 1016 RVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKID---SLSLAGEKKKLYGKVIFKNVRFAYPERPEI 1092 (1321)
T ss_dssp HHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSC---TTCCCSBCCCCCCCEEEEEEEECCTTSCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCEEEEEEEEEECCCCCCC
T ss_conf 89999999987788999999999999999999998999860766577---766778788888818999879857999988
Q ss_pred CCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHH
Q ss_conf 40221158851893999998999998899999841777997589996972799997887424189826777776657770
Q 000475 1235 MVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTN 1314 (1470)
Q Consensus 1235 ~vLk~is~~i~~GekvgIVGrTGSGKSTLi~~L~rl~~p~~G~I~IDG~dI~~i~l~~LRs~isiIPQdp~LF~gTIR~N 1314 (1470)
+||+|+||+|++||+||||||||||||||+++|+|+++|++|+|+|||+||+++++++||+++++|||||+||+||||+|
T Consensus 1093 ~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreN 1172 (1321)
T 4f4c_A 1093 EILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAEN 1172 (1321)
T ss_dssp CSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHH
T ss_pred CCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHH
T ss_conf 21245169988989999989999819999999956863899789999998654999999854599878997327239999
Q ss_pred CCCC---CCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHH
Q ss_conf 3869---9999999999999849199998400134763457999889259999999998703998899846678999997
Q 000475 1315 LDPL---EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTAT 1391 (1470)
Q Consensus 1315 Ldp~---~~~sD~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQRQll~LARALLr~~~ILiLDEaTSslD~~T 1391 (1470)
|..+ .+++|+|||+|+++++++++|.++|+||||.|+|+|.|||||||||+|||||+||+|+||+||||||++|++|
T Consensus 1173 I~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~t 1252 (1321)
T 4f4c_A 1173 IIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTES 1252 (1321)
T ss_dssp HSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHH
T ss_pred HHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
T ss_conf 74549999999999999999829849997176789998238891569999999999999971799899968111578999
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHH
Q ss_conf 999999999865993789971491334202989999598798945934786119986999999998
Q 000475 1392 DNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1457 (1470)
Q Consensus 1392 d~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrVlVL~~G~ivE~g~p~~Ll~~~~s~f~~lv~~~~ 1457 (1470)
|+.||++|++.+++||+|+||||++|+++||||+|||+|+|+|+|+|++|+++ +|.|++|++...
T Consensus 1253 E~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~-~g~y~~L~~~Q~ 1317 (1321)
T 4f4c_A 1253 EKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSE-KGAYYKLTQKQM 1317 (1321)
T ss_dssp HHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHC-C-----------
T ss_pred HHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHH
T ss_conf 99999999997399989996068999996999999989899998888999849-809999999998
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1289.35 Aligned_cols=1159 Identities=18% Similarity=0.208 Sum_probs=842.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--------CCC---------HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999864999--------973---------0689999999999999999999
Q 000475 272 AVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKH--------DHS---------SYHYGLVLASVFLFAKTVESLT 334 (1470)
Q Consensus 272 ~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~--------~~~---------~~~~g~~l~~~l~~~~~~~~l~ 334 (1470)
..|..+++..++.++..++..+.|+++..+++.+.... ... .......++..++...++..++
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (1284)
T 3g5u_A 45 LDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIV 124 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999999999999999999999986134443322222211111002446889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999986011258---999899999999739999999999-9999999999999899998
Q 000475 335 QRQWYFGANRIGIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVILY 410 (1470)
Q Consensus 335 ~~~~~~~~~~~g~rir~~L~~~iy~K~l~ls~~---~~~~G~ivnlms~D~~~i~~~~~~-~~~~~~~plqi~i~l~~L~ 410 (1470)
.-...+...+.+.++-..++..+|+|.++++.. ..++|+++|.++.|++.+.+++.. +..+....+.++.++++++
T Consensus 125 ~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 204 (1284)
T 3g5u_A 125 AYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGF 204 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999986998997568877899999988999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88556899999999999999999999999999999999999999999999800499998551999999999999999999
Q 000475 411 KNLGAAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDS 490 (1470)
Q Consensus 411 ~~lG~~a~l~gl~~~~i~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~ 490 (1470)
.++|..+++.+++++++..+...+.+...+...+.++..++......|.++||++||.|++|+.+.++..+.-+.-.+.
T Consensus 205 -~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~~ 283 (1284)
T 3g5u_A 205 -TRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRL 283 (1284)
T ss_dssp -HTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf -9989999999999999999999999999999999999999999999999978799998465399999999999999999
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999899999999--99899999999999982398778999999999999999999999999999999999999999
Q 000475 491 LKKYLYTCSAIAFLFW--ASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQE 568 (1470)
Q Consensus 491 l~~~~~~~a~~~~~~~--~~p~~v~~~tf~~~~~~~~~L~~~~vf~~la~~~~l~~pl~~lp~~i~~~~~a~vS~~Ri~~ 568 (1470)
..+.....+....+.. .....+.++++|.+.+..+.++++.+++++........|+..+...+..+.++.++.+|+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~ 363 (1284)
T 3g5u_A 284 GIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFK 363 (1284)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999299889999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCC--CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCEEEEECCCCCCHHHHHHHHHC
Q ss_conf 8624489999--88889889984189964699807875556788633247-66751893999984799993799988807
Q 000475 569 FIKEDNQKKP--ITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILG 645 (1470)
Q Consensus 569 fL~~~e~~~~--~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~~~L~~-nl~i~~G~~vaivG~~GsGKStLl~~ilG 645 (1470)
+++.+++.+. ....+.......|+++|++|+|+.. +..+.|+| ||++++|++++|+|++|||||||+++|+|
T Consensus 364 ~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~-----~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~g 438 (1284)
T 3g5u_A 364 IIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSR-----KEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQR 438 (1284)
T ss_dssp TTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSST-----TSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHTTT
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC-----CCCCCEECCEEEECCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 9728986776665677777777718999989976999-----98710125458975998899989999979999999807
Q ss_pred CCCCCCCCEEEECCE-------------EEEECCCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCC
Q ss_conf 876898848998897-------------689837777888648999723977-897899999998032179974017885
Q 000475 646 EIPRISGAAIKVHGK-------------KAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDL 711 (1470)
Q Consensus 646 e~~~~~G~vi~~~g~-------------iayv~Q~~wi~~~TIreNIlfg~~-~~~~~y~~vi~~c~L~~di~~lp~Gd~ 711 (1470)
+++|.+|++ .++|. ++||+|+||++++||+|||.||.+ .++++++++++.|++.++++.+|+|++
T Consensus 439 ~~~~~~G~i-~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~ 517 (1284)
T 3g5u_A 439 LYDPLDGMV-SIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQFD 517 (1284)
T ss_dssp SSCCSEEEE-EETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGGG
T ss_pred CCCCCCEEE-EECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCC
T ss_conf 889997389-9999987757999998654898688753776699997457989999999999998296999974656334
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEE
Q ss_conf 20058998774589999999999824999999827677879999999999999761299589998179321531598999
Q 000475 712 SVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLV 791 (1470)
Q Consensus 712 t~iGe~G~~LSGGQkqRi~LARAly~~~~i~lLDdp~SalD~~~~~~i~~~~i~~~l~~kTvilvTH~~~~l~~~D~I~v 791 (1470)
|.+||+|.+|||||||||+||||++++|+|++||||||+||+++++.+ .+++....+++|+|+|||+++.+..||+|++
T Consensus 518 t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~i~~~d~i~v 596 (1284)
T 3g5u_A 518 TLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVV-QAALDKAREGRTTIVIAHRLSTVRNADVIAG 596 (1284)
T ss_dssp CCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHH-HHHHHHHHTTSEEEEECSCHHHHTTCSEEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEEECCHHHHHCCCEEEE
T ss_conf 501478786599999999999999529998999798777799999999-9999997399989999407789974998999
Q ss_pred EECCEEEEECCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCC--CCCCC---CCCCCCC-CH-HHHHCCC---CCCCCCC
Q ss_conf 949889994071567852006999999984310257999987--86565---6766664-11-1110048---8887888
Q 000475 792 MKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQE--DKCLS---RVPCQMS-QI-TEERFAR---PISCGEF 861 (1470)
Q Consensus 792 l~~G~i~~~G~~~el~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~-~~-~~~~~~~---~~~~~~~ 861 (1470)
|++|+|++.|+++|+++ .++.+.++...+............ ..... ..+.... .. ...+... .......
T Consensus 597 l~~G~i~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (1284)
T 3g5u_A 597 FDGGVIVEQGNHDELMR-EKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSICGPHDQD 675 (1284)
T ss_dssp CSSSCCCCEECHHHHHH-TTSHHHHHHHHTC-------------------------------------------------
T ss_pred EECCEEEEECCHHHHHH-CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98999999788999986-78779999997430022111333333222223443333333320003454333445642233
Q ss_pred CCCCCCCH--HHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHCCCCC----CCCCCCHHH
Q ss_conf 98984000--00175117889999998401268999999999999997435678----887401234----455220233
Q 000475 862 SGRSQDED--TELGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYW----IAWATDEKR----KVSREQLIG 931 (1470)
Q Consensus 862 ~~~~~~e~--~~~G~v~~~~y~~y~~~~~g~~~~~~i~~~~~~~~~~~i~~~~w----l~~~~~~~~----~~~~~~~i~ 931 (1470)
.....+|+ .......+..++.|.+..++...+ .+++.++..+......++ +..+....+ ......+..
T Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 753 (1284)
T 3g5u_A 676 RKLSTKEALDEDVPPASFWRILKLNSTEWPYFVV--GIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSL 753 (1284)
T ss_dssp --------CCCCCSCCCTTHHHHHHHHTCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 2110245553136625899999984515799999--99999999999999999999999998556850336779999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCHHHHHHHHHHCHHHHHCCHHHHHHHHH
Q ss_conf 578756578999999999999999999999999999998348733323--467134899984001110110689999999
Q 000475 932 VFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFD--STPSSRILNRCSTDQSTVDTDIPYRLAGLA 1009 (1470)
Q Consensus 932 ~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~ap~~ffd--~tp~GrIlnR~s~D~~~id~~i~~~~~~~~ 1009 (1470)
+|+++++...++.+.+.+.+...+.+...++|.+++++++++|++||| .+|+|+++||+++|+..++..++..+..++
T Consensus 754 ~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~ 833 (1284)
T 3g5u_A 754 LFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIF 833 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999983998887578998899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 9999999999999998679999999999999999885455656778999999-999999998351010487899855014
Q 000475 1010 FALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYIT-TARELARMVGTRKAPILHHFSESIAGA 1088 (1470)
Q Consensus 1010 ~~~~~~i~~~~i~~~~~~~~~~i~ip~~~l~~~~~~~~~~~~~~~l~~~y~~-~~r~l~rl~~~~~spi~~~~~Etl~G~ 1088 (1470)
..++.+++.+++++.+.|.+.++++.++++.+.+.. ...++... ..+..+ ..+....++.|++.|+
T Consensus 834 ~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~--------~~~~~~~~~~~~~~~-----~~~~~~~~~~e~l~gi 900 (1284)
T 3g5u_A 834 QNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGV--------VEMKMLSGQALKDKK-----ELEGSGKIATEAIENF 900 (1284)
T ss_dssp HHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH
T ss_conf 999999999999999969999999999999999999--------999999999999999-----9999999999999889
Q ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HHHHCCCCCCHHHHHHHHHHH
Q ss_conf 89886030889999999999998777999996757999999999999999---99999-976127876988999999999
Q 000475 1089 TTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFF---LVLII-LVTLPRSAIDPSLAGLAATYG 1164 (1470)
Q Consensus 1089 ~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~---~~~~~-~~~~~~~~~~~~~~gl~lsy~ 1164 (1470)
.+||+|+.++++.+++.+..+...+...... .|.+....+...+... ....+ ...+..+.++.+.......+.
T Consensus 901 ~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~ 977 (1284)
T 3g5u_A 901 RTVVSLTREQKFETMYAQSLQIPYRNAMKKA---HVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAI 977 (1284)
T ss_dssp TTTTTCSSHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 9999846599999999999999999999999---9999999999999999999999999999990980699999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEE
Q ss_conf 99999999999999999996517999999733999886334799999999998737999689884799-89402211588
Q 000475 1165 LNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCT 1243 (1470)
Q Consensus 1165 l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vLk~is~~ 1243 (1470)
.........+.....++.....+.+|+.++.+.++|.+... ..+.+.++..|.|+++||+++|+.. ..++|+|+||+
T Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~--~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~ 1055 (1284)
T 3g5u_A 978 VFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYS--TQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLE 1055 (1284)
T ss_dssp HHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCC--SSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEE
T ss_conf 99999999999999999999999999999983887666655--5665456777857999989977999987002030599
Q ss_pred EECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCC---CC
Q ss_conf 518939999989999988999998417779975899969727999978874241898267777766577703869---99
Q 000475 1244 FPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL---EQ 1320 (1470)
Q Consensus 1244 i~~GekvgIVGrTGSGKSTLi~~L~rl~~p~~G~I~IDG~dI~~i~l~~LRs~isiIPQdp~LF~gTIR~NLdp~---~~ 1320 (1470)
+++||++|||||||||||||+++|+|+++|++|+|.+||+|+++++++++|+++++|||||.+|++|||+|+.+. ..
T Consensus 1056 i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~ 1135 (1284)
T 3g5u_A 1056 VKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRV 1135 (1284)
T ss_dssp ECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCC
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 76998899988999978999999946867899779899998000789999702689877874066669999746687789
Q ss_pred CCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 99999999999849199998400134763457999889259999999998703998899846678999997999999999
Q 000475 1321 HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIR 1400 (1470)
Q Consensus 1321 ~sD~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQRQll~LARALLr~~~ILiLDEaTSslD~~Td~~Iq~~I~ 1400 (1470)
.++++++++++++++++++..+|+||||.++|+|.+||||||||+|||||++++|+||+||||||++|++++..|++.|+
T Consensus 1136 ~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~ 1215 (1284)
T 3g5u_A 1136 VSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALD 1215 (1284)
T ss_dssp CCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 99999999999839599997270424561178889338999999999999974999999868755579999999999999
Q ss_pred HHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHHHHC
Q ss_conf 865993789971491334202989999598798945934786119986999999998303
Q 000475 1401 EETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLRRT 1460 (1470)
Q Consensus 1401 ~~f~~~TVI~IAHRl~ti~~~DrVlVL~~G~ivE~g~p~~Ll~~~~s~f~~lv~~~~~~~ 1460 (1470)
+..+++|+|+||||++++.+||||+||++|+++|+|+|++|+++ +|.|++|++......
T Consensus 1216 ~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~g~y~~l~~~q~~~~ 1274 (1284)
T 3g5u_A 1216 KAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQ-KGIYFSMVSVQAGAK 1274 (1284)
T ss_dssp HHSSSSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHS-CSHHHHHHHHHC---
T ss_pred HHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHHHCC
T ss_conf 86799989999558799980998999989989997789999847-777999999976132
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=760.73 Aligned_cols=515 Identities=20% Similarity=0.250 Sum_probs=442.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHCCHHHHHHH
Q ss_conf 02335787565789999999999999999999999999999983487333234671348999840011101106899999
Q 000475 928 QLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAG 1007 (1470)
Q Consensus 928 ~~i~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrIlnR~s~D~~~id~~i~~~~~~ 1007 (1470)
.++..|+.++++..++.+++.+++.+.+.+...+++.++++++++.|++|||++++|++++|+++|++.++..+...+..
T Consensus 137 ~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~ 216 (1321)
T 4f4c_A 137 NVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGM 216 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999997889899879984899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 99999999999999999867999999999999999988545565677899999999999999835101048789985501
Q 000475 1008 LAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAG 1087 (1470)
Q Consensus 1008 ~~~~~~~~i~~~~i~~~~~~~~~~i~ip~~~l~~~~~~~~~~~~~~~l~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G 1087 (1470)
++..++.+++.++++++++|.+.++.+..+++.+++. .++.+..+...+......+...+++.|++.|
T Consensus 217 ~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g 284 (1321)
T 4f4c_A 217 AFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCG------------FAIAKSMSTFAIRETLRYAKAGKVVEETISS 284 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999998999999999999999999------------9999999999999999999999999999983
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 48988603088999999999999877799999675799999999999999999999-97612787698899999999999
Q 000475 1088 ATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLN 1166 (1470)
Q Consensus 1088 ~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~lsy~l~ 1166 (1470)
+.+||+|++|+.+.+++.+..+...+..........+......++..+....+..+ ...+..+.+++|.+..++.|...
T Consensus 285 i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~ 364 (1321)
T 4f4c_A 285 IRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMM 364 (1321)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99999821429999999999999999999999999999999999999999999999999999599869999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEEE
Q ss_conf 999999999999999996517999999733999886334799999999998737999689884799-8940221158851
Q 000475 1167 LNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFP 1245 (1470)
Q Consensus 1167 l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vLk~is~~i~ 1245 (1470)
+...+..+...+..+.....+.+|+.++.+.+++.+.. ....+...+..|.|+|+||+|+|+.. ..++|+|+||+|+
T Consensus 365 ~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~--~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~ 442 (1321)
T 4f4c_A 365 GSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPVIDSS--SKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVN 442 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCSSCS--SSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEEC
T ss_conf 99999989999999999999999999997178534566--6556567788876799985540799998743333188622
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC-CCCHH
Q ss_conf 89399999899999889999984177799758999697279999788742418982677777665777038699-99999
Q 000475 1246 GEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQ 1324 (1470)
Q Consensus 1246 ~GekvgIVGrTGSGKSTLi~~L~rl~~p~~G~I~IDG~dI~~i~l~~LRs~isiIPQdp~LF~gTIR~NLdp~~-~~sD~ 1324 (1470)
+||++||||+||||||||+++|.|+++|++|+|.+||+|+++++++++|++++||||||+||+||||+||..+. +++|+
T Consensus 443 ~G~~vaivG~sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~ 522 (1321)
T 4f4c_A 443 AGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITRE 522 (1321)
T ss_dssp TTCEEEEEECSSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHH
T ss_pred CCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHH
T ss_conf 88278998058985778888754565164486157996501125999850466658753320786167886415522099
Q ss_pred HHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 99999998491999984001347634579998892599999999987039988998466789999979999999998659
Q 000475 1325 EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS 1404 (1470)
Q Consensus 1325 eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQRQll~LARALLr~~~ILiLDEaTSslD~~Td~~Iq~~I~~~f~ 1404 (1470)
++++|++.|++++++..+|+|+||.|+|+|.+||||||||+|||||++++|+|++||||||++|++||..|+++|++..+
T Consensus 523 ~v~~a~~~a~l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~ 602 (1321)
T 4f4c_A 523 EMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAK 602 (1321)
T ss_dssp HHHHHHHHTTCHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 99999987565468870888886075589887777787999999987259998998455446887899999999999847
Q ss_pred CCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHH
Q ss_conf 93789971491334202989999598798945934786119986999999998
Q 000475 1405 RCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1457 (1470)
Q Consensus 1405 ~~TVI~IAHRl~ti~~~DrVlVL~~G~ivE~g~p~~Ll~~~~s~f~~lv~~~~ 1457 (1470)
++|+|+||||++++.+||+|+||++|+|+|.|+|+||++ ++|.|++|++...
T Consensus 603 ~~T~iiiaHrls~i~~aD~Iivl~~G~ive~Gth~eL~~-~~g~y~~l~~~q~ 654 (1321)
T 4f4c_A 603 GRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRALMA-QQGLYYDLVTAQT 654 (1321)
T ss_dssp TSEEEEECSCTTTTTTCSEEEEEETTEEEEEECHHHHHT-TTCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHCCEEEEEECCEEECCCCHHHHHH-HHHHHHHHHHHHH
T ss_conf 988999736387898689899963996513689999998-5327999999622
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=721.50 Aligned_cols=514 Identities=19% Similarity=0.257 Sum_probs=431.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHCCHHHHHHH
Q ss_conf 02335787565789999999999999999999999999999983487333234671348999840011101106899999
Q 000475 928 QLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAG 1007 (1470)
Q Consensus 928 ~~i~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrIlnR~s~D~~~id~~i~~~~~~ 1007 (1470)
.+..+|++++++..++.+++.++....+.+...++|.++++++++.|++|||++++|+++||+++|++.++..++..+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~ 188 (1284)
T 3g5u_A 109 TYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGM 188 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998699899756887789999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 99999999999999999867999999999999999988545565677899999999999999835101048789985501
Q 000475 1008 LAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAG 1087 (1470)
Q Consensus 1008 ~~~~~~~~i~~~~i~~~~~~~~~~i~ip~~~l~~~~~~~~~~~~~~~l~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G 1087 (1470)
++..++.+++.+++++.++|++.+++++++++.+++. .++.+..+...+......++..+++.|++.|
T Consensus 189 ~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~g 256 (1284)
T 3g5u_A 189 FFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSA------------GIWAKILSSFTDKELHAYAKAGAVAEEVLAA 256 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999999998999999999999999999------------9999999999999999999999999999978
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 48988603088999999999999877799999675799999999999999999999-97612787698899999999999
Q 000475 1088 ATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLN 1166 (1470)
Q Consensus 1088 ~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~lsy~l~ 1166 (1470)
+.+||+|++|+++.+++.+..+...+..........+......++..+......++ ...+..+.+++|.+..++.+.+.
T Consensus 257 i~~ikaf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~ 336 (1284)
T 3g5u_A 257 IRTVIAFGGQKKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLI 336 (1284)
T ss_dssp HHHHHTTCCCCSHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 79999846539999999999999999999999999999999999999999999999999999299889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEEE
Q ss_conf 999999999999999996517999999733999886334799999999998737999689884799-8940221158851
Q 000475 1167 LNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFP 1245 (1470)
Q Consensus 1167 l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vLk~is~~i~ 1245 (1470)
....+..+...+..+.....+++|+.++.+.++|.+...+...++ .+..|.|+++||+|+|+.+ .+++|+|+||+++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~--~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~ 414 (1284)
T 3g5u_A 337 GAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKP--DNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVK 414 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCC--TTCCCCEEEEEEEECCSSTTSCCSEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCEEEEEEEEEECCCCCCCCCEECCEEEEC
T ss_conf 999999999999999999999999999972898677666567777--777771899998997699998710125458975
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC-CCCHH
Q ss_conf 89399999899999889999984177799758999697279999788742418982677777665777038699-99999
Q 000475 1246 GEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQ 1324 (1470)
Q Consensus 1246 ~GekvgIVGrTGSGKSTLi~~L~rl~~p~~G~I~IDG~dI~~i~l~~LRs~isiIPQdp~LF~gTIR~NLdp~~-~~sD~ 1324 (1470)
+||++|||||||||||||+++|.|+++|++|+|.+||.|+++++++++|+++++|||||.+|++|||+|+.+.. ..+++
T Consensus 415 ~G~~~~ivG~sGsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~ 494 (1284)
T 3g5u_A 415 SGQTVALVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMD 494 (1284)
T ss_dssp TTCEEEEECCSSSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHH
T ss_conf 99889998999997999999980788999738999999877579999986548986887537766999974579899999
Q ss_pred HHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 99999998491999984001347634579998892599999999987039988998466789999979999999998659
Q 000475 1325 EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS 1404 (1470)
Q Consensus 1325 eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQRQll~LARALLr~~~ILiLDEaTSslD~~Td~~Iq~~I~~~f~ 1404 (1470)
+++++++.+++++++..+|+|+||.++|+|.+||||||||+|||||++++|+||+||||||++|++|+..+++.+++..+
T Consensus 495 ~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~ 574 (1284)
T 3g5u_A 495 EIEKAVKEANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKARE 574 (1284)
T ss_dssp HHHHHHHHTTCHHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 99999998296999974656334501478786599999999999999529998999798777799999999999999739
Q ss_pred CCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 9378997149133420298999959879894593478611998699999999
Q 000475 1405 RCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEF 1456 (1470)
Q Consensus 1405 ~~TVI~IAHRl~ti~~~DrVlVL~~G~ivE~g~p~~Ll~~~~s~f~~lv~~~ 1456 (1470)
++|+|+||||++++.+||+|+||++|+++|.|+|++|+++ ++.|++++...
T Consensus 575 ~~t~i~itH~l~~i~~~d~i~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 625 (1284)
T 3g5u_A 575 GRTTIVIAHRLSTVRNADVIAGFDGGVIVEQGNHDELMRE-KGIYFKLVMTQ 625 (1284)
T ss_dssp TSEEEEECSCHHHHTTCSEEEECSSSCCCCEECHHHHHHT-TSHHHHHHHHT
T ss_pred CCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHH
T ss_conf 9989999407789974998999989999997889999867-87799999974
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=692.55 Aligned_cols=562 Identities=23% Similarity=0.315 Sum_probs=469.6
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7889999998401268999999999999997435678887401234---455-220233578756578999999999999
Q 000475 877 WTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKR---KVS-REQLIGVFIFLSGGSSFFILGRAVLLA 952 (1470)
Q Consensus 877 ~~~y~~y~~~~~g~~~~~~i~~~~~~~~~~~i~~~~wl~~~~~~~~---~~~-~~~~i~~y~~l~~~~~~~~~~~~~~~~ 952 (1470)
++..+.|++..+ ..+.+.+++.++..++.+..++++....+... +.+ ...++.+++++.+...++.+.+.+...
T Consensus 25 ~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (598)
T 3qf4_B 25 LRRLLGYLRPHT--FTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIML 102 (598)
T ss_dssp HHHHGGGTGGGH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999--999999999999999999999999999999973688899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999834873332346713489998400111011068999999999999999999999986799999
Q 000475 953 TIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPL 1032 (1470)
Q Consensus 953 ~~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrIlnR~s~D~~~id~~i~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~i 1032 (1470)
..+.+...+++.++++++++.|+.||+++++|+++||+++|++.++..+...+..++...+.+++.+++++.++|++.++
T Consensus 103 ~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~ 182 (598)
T 3qf4_B 103 TLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLV 182 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999977999997688889999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999885455656778999999999999998351010487899855014898860308899999999999987
Q 000475 1033 FLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYS 1112 (1470)
Q Consensus 1033 ~ip~~~l~~~~~~~~~~~~~~~l~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~ 1112 (1470)
.+..+++.+++. .++.+..++..+......+...+++.|++.|+.+||+|++|+.+.+++.+..+...
T Consensus 183 ~l~~~~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~ 250 (598)
T 3qf4_B 183 TLSIVPLTVLIT------------QIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLR 250 (598)
T ss_dssp HTTHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 999999999999------------99999999999999999999999999997379999974870999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7799999675799999999999999999999-976127876988999999999999999999999999999965179999
Q 000475 1113 CVTFHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERI 1191 (1470)
Q Consensus 1113 ~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~~~~le~~~~sveRi 1191 (1470)
+..........+.....+++..+...+...+ ......+.+++|.....+.|...+...+..+...+..++..+.+++|+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri 330 (598)
T 3qf4_B 251 KVGTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERI 330 (598)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999985997899999999999999999999999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCC
Q ss_conf 99733999886334799999999998737999689884799894022115885189399999899999889999984177
Q 000475 1192 LQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV 1271 (1470)
Q Consensus 1192 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLi~~L~rl~ 1271 (1470)
.++.+.|+|.+. ..+.+.++..|.|+++||+++|+++ .++|+|+||++++||++|||||||||||||+++|.|++
T Consensus 331 ~~~l~~~~~~~~----~~~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~ 405 (598)
T 3qf4_B 331 FEILDLEEEKDD----PDAVELREVRGEIEFKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFY 405 (598)
T ss_dssp HHHTTSCCCCCC----SSCCCCCSCCCCEEEEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSS
T ss_pred HHHHCCCCCCCC----CCCCCCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 999768877777----7777777777718999989977999-86012227998699889998999996999999994585
Q ss_pred CCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCC
Q ss_conf 799758999697279999788742418982677777665777038699-9999999999998491999984001347634
Q 000475 1272 EPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPV 1350 (1470)
Q Consensus 1272 ~p~~G~I~IDG~dI~~i~l~~LRs~isiIPQdp~LF~gTIR~NLdp~~-~~sD~eI~~aL~~~~L~~~i~~lp~gLdt~v 1350 (1470)
+|++|+|.+||.|+.+++.+++|++++++||||.+|++|+|+|+.... ..++++++++++.+++++++..+|+|+|+.+
T Consensus 406 ~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~ 485 (598)
T 3qf4_B 406 DVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVL 485 (598)
T ss_dssp CCSEEEEEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBC
T ss_pred CCCCEEEEECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHH
T ss_conf 79980899999983018899998410899079823246399997447999999999999999697888974645323642
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECC
Q ss_conf 57999889259999999998703998899846678999997999999999865993789971491334202989999598
Q 000475 1351 AEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEG 1430 (1470)
Q Consensus 1351 ~e~G~nLS~GQRQll~LARALLr~~~ILiLDEaTSslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrVlVL~~G 1430 (1470)
+|+|.+||||||||+|||||++++|+||+||||||++|++++..|++.|++..+++|+|+||||++++..||+|++|++|
T Consensus 486 ~~~g~~LSgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G 565 (598)
T 3qf4_B 486 TDNGEDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDG 565 (598)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECC
T ss_conf 27889879999999999999964999999989766799999999999999980899899994277899719989999899
Q ss_pred EEEEECCHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 7989459347861199869999999983
Q 000475 1431 KVLEYDSPRQLLEDNSSSFSKLVAEFLR 1458 (1470)
Q Consensus 1431 ~ivE~g~p~~Ll~~~~s~f~~lv~~~~~ 1458 (1470)
+++|.|+|++|++ +++.|++++.+...
T Consensus 566 ~i~~~g~~~~l~~-~~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 566 EIVEMGKHDELIQ-KRGFYYELFTSQYG 592 (598)
T ss_dssp SEEECSCHHHHHH-TTCHHHHHHHHHHG
T ss_pred EEEEECCHHHHHH-CCCHHHHHHHHHHH
T ss_conf 9998778999986-78779999999764
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=688.26 Aligned_cols=567 Identities=20% Similarity=0.283 Sum_probs=454.8
Q ss_pred CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCC---CHHHHHHHHHHHHHHHHHHHH
Q ss_conf 75117889999998401268999999999999997435678887401234-45522---023357875657899999999
Q 000475 873 GRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKR-KVSRE---QLIGVFIFLSGGSSFFILGRA 948 (1470)
Q Consensus 873 G~v~~~~y~~y~~~~~g~~~~~~i~~~~~~~~~~~i~~~~wl~~~~~~~~-~~~~~---~~i~~y~~l~~~~~~~~~~~~ 948 (1470)
|...++.++.|++..++ .+.+.+++.++..++.+..+++++++.+... ..+.. .+...++++.+...++.+++.
T Consensus 7 g~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (587)
T 3qf4_A 7 GGGGSKTLARYLKPYWI--FAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGDFSLVLKTGILMLIVALIGAVGGIGCT 84 (587)
T ss_dssp -CCCCCCGGGGTGGGHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 85349999999999999--9999999999999999999999999999987369879999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999983487333234671348999840011101106899999999999999999999998679
Q 000475 949 VLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQ 1028 (1470)
Q Consensus 949 ~~~~~~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrIlnR~s~D~~~id~~i~~~~~~~~~~~~~~i~~~~i~~~~~~~ 1028 (1470)
++....+.+...+++.++++++++.|+.||+++++|+++||+++|++.++..+...+..++...+.+++.+++++.++|.
T Consensus 85 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 164 (587)
T 3qf4_A 85 VFASYASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVK 164 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999997889799765888999999999999999999999999999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 99999999999999988545565677899999999999999835101048789985501489886030889999999999
Q 000475 1029 VFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLI 1108 (1470)
Q Consensus 1029 ~~~i~ip~~~l~~~~~~~~~~~~~~~l~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~ 1108 (1470)
+.++.+..+++...+. .++.+..+...+......+.+.+++.|+++|+.+||+|++|+.+.+++.+..
T Consensus 165 l~l~~l~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~ 232 (587)
T 3qf4_A 165 LSSVLIFLIPPIVLLF------------VWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKAN 232 (587)
T ss_dssp TTHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 9999999999999999------------9999999999999999999999999999855999998621499999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99877799999675799999999999999999999-97612787698899999999999999999999999999996517
Q 000475 1109 DDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMIS 1187 (1470)
Q Consensus 1109 d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~~~~le~~~~s 1187 (1470)
+...+..........+......++..+.......+ ......+.++.|....+..|...+...+..+...+..+.....+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s 312 (587)
T 3qf4_A 233 ESLRRSIISAFSLIVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASAS 312 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998499389999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHH
Q ss_conf 99999973399988633479999999999873799968988479989402211588518939999989999988999998
Q 000475 1188 VERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQAL 1267 (1470)
Q Consensus 1188 veRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLi~~L 1267 (1470)
.+|+.++.+.+++.+. ...+.+.++..|.|+++|++++|+++.+++|+|+||++++||++|||||||||||||+++|
T Consensus 313 ~~ri~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l 389 (587)
T 3qf4_A 313 AKRVLEVLNEKPAIEE---ADNALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLI 389 (587)
T ss_dssp HHHHHHHHHCCCSCCC---CTTCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTT
T ss_pred HHHHHHHHCCCCCCCC---CCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHH
T ss_conf 9999999768976578---8776566888880799788998489997642111799869988999899999799999999
Q ss_pred HCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCHHHHHHCCCCC
Q ss_conf 4177799758999697279999788742418982677777665777038699-999999999999849199998400134
Q 000475 1268 FRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLL 1346 (1470)
Q Consensus 1268 ~rl~~p~~G~I~IDG~dI~~i~l~~LRs~isiIPQdp~LF~gTIR~NLdp~~-~~sD~eI~~aL~~~~L~~~i~~lp~gL 1346 (1470)
.|+++|++|+|.+||+|+++++.+++|++++++||||.+|++|+|+|+.... .+++++++++++.+++++++..+|+|+
T Consensus 390 ~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~ 469 (587)
T 3qf4_A 390 PRLIDPERGRVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGY 469 (587)
T ss_dssp TTSSCCSEEEEEESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGG
T ss_pred HCCCCCCCCEEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCH
T ss_conf 27866998679899998340789999841389778986767559999852488999999999999968499997565312
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEE
Q ss_conf 76345799988925999999999870399889984667899999799999999986599378997149133420298999
Q 000475 1347 DAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLV 1426 (1470)
Q Consensus 1347 dt~v~e~G~nLS~GQRQll~LARALLr~~~ILiLDEaTSslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrVlV 1426 (1470)
|+.++++|.+||||||||++||||++++|+||+||||||++|++++..|++.|++..+++|+|+||||++++..||+|++
T Consensus 470 ~~~~~~~~~~LSgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~v 549 (587)
T 3qf4_A 470 DSRVERGGRNFSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILV 549 (587)
T ss_dssp GCEECSSSCSSCHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEE
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEE
T ss_conf 12751898992999999999999997299999997975447999999999999986799989998227688981998999
Q ss_pred EECCEEEEECCHHHHHHCCCCHHHHHHHHHH
Q ss_conf 9598798945934786119986999999998
Q 000475 1427 LDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1457 (1470)
Q Consensus 1427 L~~G~ivE~g~p~~Ll~~~~s~f~~lv~~~~ 1457 (1470)
|++|+++|.|+|++|+++ ++.|++++++..
T Consensus 550 l~~G~i~~~g~~~el~~~-~~~~~~~~~~~~ 579 (587)
T 3qf4_A 550 LHEGKVAGFGTHKELLEH-CKPYREIYESQF 579 (587)
T ss_dssp EETTEEEEEECHHHHHHH-CHHHHHHHHHHC
T ss_pred EECCEEEEECCHHHHHHC-CCHHHHHHHHHH
T ss_conf 989989997889999867-839999999984
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=669.62 Aligned_cols=558 Identities=19% Similarity=0.264 Sum_probs=447.5
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCC---CC-----CCHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999840126899999999999999743567888740123---445---52-----202335787565789999999
Q 000475 879 VYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK---RKV---SR-----EQLIGVFIFLSGGSSFFILGR 947 (1470)
Q Consensus 879 ~y~~y~~~~~g~~~~~~i~~~~~~~~~~~i~~~~wl~~~~~~~---~~~---~~-----~~~i~~y~~l~~~~~~~~~~~ 947 (1470)
.++.|++...+.. .+.+++.++..++.+..++.+.+..+.- ... .. ..+...+.++.+...++.+.+
T Consensus 4 ~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (578)
T 4a82_A 4 RYLQFVKPYKYRI--FATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIR 81 (578)
T ss_dssp HHHHHHGGGHHHH--HHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999988999999--99999999999999999999999999998168711467788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998348733323467134899984001110110689999999999999999999999867
Q 000475 948 AVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAW 1027 (1470)
Q Consensus 948 ~~~~~~~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrIlnR~s~D~~~id~~i~~~~~~~~~~~~~~i~~~~i~~~~~~ 1027 (1470)
.+.....+.+...+++.++++++++.|++||+++++|++++|+++|++.++..+...+..++...+.+++.+++++.++|
T Consensus 82 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 161 (578)
T 4a82_A 82 QYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDV 161 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999878999976898699999999999999999999999999999999999999999969
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 99999999999999998854556567789999999999999983510104878998550148988603088999999999
Q 000475 1028 QVFPLFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSL 1107 (1470)
Q Consensus 1028 ~~~~i~ip~~~l~~~~~~~~~~~~~~~l~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~ 1107 (1470)
++.++.+..+++.+.+. .++.+..++..+......+...+++.|++.|+.+||+|++|+.+.+++.+.
T Consensus 162 ~l~l~~l~~~~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~ 229 (578)
T 4a82_A 162 KLTLAALFIFPFYILTV------------YVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKK 229 (578)
T ss_dssp TTHHHHTTHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 99999999999999999------------999999999999999999999999999982499999816649999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999877799999675799999999999999999999-9761278769889999999999999999999999999999651
Q 000475 1108 IDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMI 1186 (1470)
Q Consensus 1108 ~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~~~~le~~~~ 1186 (1470)
.+...+..........+......++..+....+..+ ......+.+++|....++.|...+...+..+...+..+.....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 309 (578)
T 4a82_A 230 NTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFA 309 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999859958999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHH
Q ss_conf 79999997339998863347999999999987379996898847998940221158851893999998999998899999
Q 000475 1187 SVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQA 1266 (1470)
Q Consensus 1187 sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLi~~ 1266 (1470)
+.+|+.++.+.++|.+. ...+.+.++..|.|+++|++++|+++.+++|+|+||++++||++|||||||||||||+++
T Consensus 310 s~~ri~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~ 386 (578)
T 4a82_A 310 SMDRVFQLIDEDYDIKN---GVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINL 386 (578)
T ss_dssp HHHHHHHHHTCCCSSCC---CTTCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTT
T ss_pred HHHHHHHHHCCCCCCCC---CCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHH
T ss_conf 99999999768976667---877666677788079999999758999741343379987999999989999859999999
Q ss_pred HHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCC-CCCCHHHHHHHHHHCCCHHHHHHCCCC
Q ss_conf 8417779975899969727999978874241898267777766577703869-999999999999984919999840013
Q 000475 1267 LFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRL 1345 (1470)
Q Consensus 1267 L~rl~~p~~G~I~IDG~dI~~i~l~~LRs~isiIPQdp~LF~gTIR~NLdp~-~~~sD~eI~~aL~~~~L~~~i~~lp~g 1345 (1470)
|.|+++|++|+|.+||.|+++++.+++|++++++||||.+|++|+++|+... ...++++++++++.+++++++..+|+|
T Consensus 387 l~g~~~p~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g 466 (578)
T 4a82_A 387 IPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQG 466 (578)
T ss_dssp TTTSSCCSEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTG
T ss_pred HHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCH
T ss_conf 84678899967999999844278999960068992898347645999985279998899999999880959999757330
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEE
Q ss_conf 47634579998892599999999987039988998466789999979999999998659937899714913342029899
Q 000475 1346 LDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVL 1425 (1470)
Q Consensus 1346 Ldt~v~e~G~nLS~GQRQll~LARALLr~~~ILiLDEaTSslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrVl 1425 (1470)
+||.++|+|.+||||||||++||||++++|+|++||||||++|++++..+++.+++..+++|+|+||||++++..||+|+
T Consensus 467 ~~t~~~~~g~~LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~ 546 (578)
T 4a82_A 467 YDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIV 546 (578)
T ss_dssp GGCBCCGGGTTSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEE
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEE
T ss_conf 10253068896799999999999999749999999786545799999999999999808997999831789997199899
Q ss_pred EEECCEEEEECCHHHHHHCCCCHHHHHHH
Q ss_conf 99598798945934786119986999999
Q 000475 1426 VLDEGKVLEYDSPRQLLEDNSSSFSKLVA 1454 (1470)
Q Consensus 1426 VL~~G~ivE~g~p~~Ll~~~~s~f~~lv~ 1454 (1470)
+|++|+++|.|+|++|+++ ++.|+++++
T Consensus 547 ~l~~G~i~~~g~~~el~~~-~~~~~~~~~ 574 (578)
T 4a82_A 547 VIENGHIVETGTHRELIAK-QGAYEHLYS 574 (578)
T ss_dssp EEETTEEEEEECHHHHHHT-TSHHHHHHT
T ss_pred EEECCEEEEECCHHHHHHC-CCHHHHHHH
T ss_conf 9989989998889999858-838999998
No 8
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=665.90 Aligned_cols=560 Identities=20% Similarity=0.240 Sum_probs=466.7
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCC--CCHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78899999984012689999999999999974356788874012344-552--2023-3578756578999999999999
Q 000475 877 WTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRK-VSR--EQLI-GVFIFLSGGSSFFILGRAVLLA 952 (1470)
Q Consensus 877 ~~~y~~y~~~~~g~~~~~~i~~~~~~~~~~~i~~~~wl~~~~~~~~~-~~~--~~~i-~~y~~l~~~~~~~~~~~~~~~~ 952 (1470)
++.++.|++..++ .+.+.+++.++..++.+..++++.++.+.... .+. ..++ ..++++.++..++.+.+.+...
T Consensus 13 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (582)
T 3b60_A 13 FRRLWPTIAPFKA--GLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCIS 90 (582)
T ss_dssp HHHHHHHHGGGHH--HHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999--99999999999999999999999999998843686579999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999834873332346713489998400111011068999999999999999999999986799999
Q 000475 953 TIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPL 1032 (1470)
Q Consensus 953 ~~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrIlnR~s~D~~~id~~i~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~i 1032 (1470)
..+.+...+++.++++++++.|+.||+++++|++++|+++|++.++..+...+..++..++.+++.+++++.++|++.++
T Consensus 91 ~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 170 (582)
T 3b60_A 91 WVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSII 170 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999980999997889865899999987999999999999999999999999999999980999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999885455656778999999999999998351010487899855014898860308899999999999987
Q 000475 1033 FLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYS 1112 (1470)
Q Consensus 1033 ~ip~~~l~~~~~~~~~~~~~~~l~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~ 1112 (1470)
.+..+++.+++. .++.+..++..+......+...+++.|++.|+.+||+|+.++.+.+++.+..+...
T Consensus 171 ~l~~~~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~ 238 (582)
T 3b60_A 171 LVVLAPIVSIAI------------RVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMR 238 (582)
T ss_dssp HHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 999999999999------------99999999999999999999999999999619999983768999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77999996757999999999999999999999-76127876988999999999999999999999999999965179999
Q 000475 1113 CVTFHNCGTMEWLCLRINLLFNFAFFLVLIIL-VTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERI 1191 (1470)
Q Consensus 1113 ~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~~~~le~~~~sveRi 1191 (1470)
+..........|.....+++..+....+..+. .....+.+++|.....+.|...+...+..+...+.++.....+.+|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri 318 (582)
T 3b60_A 239 LQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTL 318 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999984999899999999999999999999999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCC
Q ss_conf 99733999886334799999999998737999689884799894022115885189399999899999889999984177
Q 000475 1192 LQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV 1271 (1470)
Q Consensus 1192 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLi~~L~rl~ 1271 (1470)
.++.+.|+|.+. . +.+.++..+.|+++|++++|+++..++|+|+||++++||++|||||||||||||+++|.|++
T Consensus 319 ~~~l~~~~~~~~---~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~ 393 (582)
T 3b60_A 319 FAILDSEQEKDE---G--KRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFY 393 (582)
T ss_dssp HHHHHSCCSCCC---C--CBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTT
T ss_pred HHHHCCCCCCCC---C--CCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 999759987667---7--77777888847999889973999974415615997699989998999998999999986106
Q ss_pred CCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCCHHHHHHCCCCCCCC
Q ss_conf 799758999697279999788742418982677777665777038699--999999999999849199998400134763
Q 000475 1272 EPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE--QHSDQEIWEVINKCHLAEIVRQDQRLLDAP 1349 (1470)
Q Consensus 1272 ~p~~G~I~IDG~dI~~i~l~~LRs~isiIPQdp~LF~gTIR~NLdp~~--~~sD~eI~~aL~~~~L~~~i~~lp~gLdt~ 1349 (1470)
+|++|+|.+||.|+++++.+++|++++++||+|.+|++|+|+|+.... ..++++++++++.+++++++..+|+|+|+.
T Consensus 394 ~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~ 473 (582)
T 3b60_A 394 DIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTI 473 (582)
T ss_dssp CCSEEEEEETTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSB
T ss_pred CCCCCEEEECCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCC
T ss_conf 89897697999982306999999608088068747787899998545999989999999999849799998450411451
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEEC
Q ss_conf 45799988925999999999870399889984667899999799999999986599378997149133420298999959
Q 000475 1350 VAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDE 1429 (1470)
Q Consensus 1350 v~e~G~nLS~GQRQll~LARALLr~~~ILiLDEaTSslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrVlVL~~ 1429 (1470)
++|+|.+||||||||++||||++++|+|++||||||++|++++..+++.|++..+++|+|+|+||++++..||+|++|++
T Consensus 474 ~~~~~~~LSgGq~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 553 (582)
T 3b60_A 474 IGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVED 553 (582)
T ss_dssp CCTTSCSSCHHHHHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEET
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEEC
T ss_conf 14798878999999999999997289989997865557989999999999999679979999454778985998999978
Q ss_pred CEEEEECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 879894593478611998699999999
Q 000475 1430 GKVLEYDSPRQLLEDNSSSFSKLVAEF 1456 (1470)
Q Consensus 1430 G~ivE~g~p~~Ll~~~~s~f~~lv~~~ 1456 (1470)
|+++|.|+|++|+++ ++.|+++++..
T Consensus 554 G~i~~~g~~~~l~~~-~~~~~~~~~~q 579 (582)
T 3b60_A 554 GIIVERGTHSELLAQ-HGVYAQLHKMQ 579 (582)
T ss_dssp TEEEEEECHHHHHHH-TSSHHHHHHHT
T ss_pred CEEEEECCHHHHHHC-CCHHHHHHHHH
T ss_conf 889884589999876-98899999975
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=663.70 Aligned_cols=560 Identities=20% Similarity=0.305 Sum_probs=466.2
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 788999999840126899999999999999743567888740123---445522023-3578756578999999999999
Q 000475 877 WTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK---RKVSREQLI-GVFIFLSGGSSFFILGRAVLLA 952 (1470)
Q Consensus 877 ~~~y~~y~~~~~g~~~~~~i~~~~~~~~~~~i~~~~wl~~~~~~~---~~~~~~~~i-~~y~~l~~~~~~~~~~~~~~~~ 952 (1470)
++.++.|++...+. + .+.+++.++..++....++++.+..+.. .+.....++ ..++++.++..++.+.+.+...
T Consensus 13 ~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (582)
T 3b5x_A 13 FKRLWTYIRLYKAG-L-VVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCLS 90 (582)
T ss_pred HHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998899999-9-999999999999999999999999999864686679999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999834873332346713489998400111011068999999999999999999999986799999
Q 000475 953 TIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPL 1032 (1470)
Q Consensus 953 ~~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrIlnR~s~D~~~id~~i~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~i 1032 (1470)
..+.+...+++.++++++++.|+.||++.++|++++|+++|++.++..+...+..++...+.+++.+++++.++|++.++
T Consensus 91 ~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 170 (582)
T 3b5x_A 91 WVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLV 170 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999986999997789878999999988999999999999999999999999999999982999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999885455656778999999999999998351010487899855014898860308899999999999987
Q 000475 1033 FLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYS 1112 (1470)
Q Consensus 1033 ~ip~~~l~~~~~~~~~~~~~~~l~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~ 1112 (1470)
.+..+++.+++. .++.+..++..+......+...+++.|++.|+.+||+|+.|+.+.+++.+..+...
T Consensus 171 ~l~~~~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~ 238 (582)
T 3b5x_A 171 LIVVAPVVAFAI------------SFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMR 238 (582)
T ss_pred HHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 999999999999------------99999999999999999999999999999519999970875999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7799999675799999999999999999999-976127876988999999999999999999999999999965179999
Q 000475 1113 CVTFHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERI 1191 (1470)
Q Consensus 1113 ~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~~~~le~~~~sveRi 1191 (1470)
+..........|.....+++..+....+..+ ......+.+++|.....+.|...+...+..+...+..+.....+.+|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri 318 (582)
T 3b5x_A 239 QQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTL 318 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999985998899999999999999999999999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCC
Q ss_conf 99733999886334799999999998737999689884799894022115885189399999899999889999984177
Q 000475 1192 LQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV 1271 (1470)
Q Consensus 1192 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLi~~L~rl~ 1271 (1470)
.++.+.++|.+. .. .+.++..+.|+++|++++|+++..++|+|+||++++||++|||||||||||||+++|.|++
T Consensus 319 ~~~l~~~~~~~~---~~--~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~ 393 (582)
T 3b5x_A 319 FGLMDLETERDN---GK--YEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFY 393 (582)
T ss_pred HHHHCCCCCCCC---CC--CCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 999758976777---77--7777788828999989972899865400416998799989998999997999999996577
Q ss_pred CCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCCHHHHHHCCCCCCCC
Q ss_conf 799758999697279999788742418982677777665777038699--999999999999849199998400134763
Q 000475 1272 EPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE--QHSDQEIWEVINKCHLAEIVRQDQRLLDAP 1349 (1470)
Q Consensus 1272 ~p~~G~I~IDG~dI~~i~l~~LRs~isiIPQdp~LF~gTIR~NLdp~~--~~sD~eI~~aL~~~~L~~~i~~lp~gLdt~ 1349 (1470)
+|++|+|.+||.|+.+++.+++|++++++||+|.+|++|+++|+.... +.++++++++++.+++++++..+|+|+||.
T Consensus 394 ~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~ 473 (582)
T 3b5x_A 394 DVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTV 473 (582)
T ss_pred CCCCCEEEECCEEHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCH
T ss_conf 89998798999985638899996485898279905310299998566889999999999999879899998476533451
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEEC
Q ss_conf 45799988925999999999870399889984667899999799999999986599378997149133420298999959
Q 000475 1350 VAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDE 1429 (1470)
Q Consensus 1350 v~e~G~nLS~GQRQll~LARALLr~~~ILiLDEaTSslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrVlVL~~ 1429 (1470)
++++|.+||||||||++||||++++|+|++||||||++|++++..+++.|++..+++|+|+|+||++++..||+|++|++
T Consensus 474 ~~~~~~~LSgGq~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 553 (582)
T 3b5x_A 474 IGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDE 553 (582)
T ss_pred HCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEEC
T ss_conf 06888847999999999999997499999997854468999999999999997289989999368899981998999989
Q ss_pred CEEEEECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 879894593478611998699999999
Q 000475 1430 GKVLEYDSPRQLLEDNSSSFSKLVAEF 1456 (1470)
Q Consensus 1430 G~ivE~g~p~~Ll~~~~s~f~~lv~~~ 1456 (1470)
|+++|.|+|++|+++ ++.|+++++..
T Consensus 554 G~i~~~g~~~~l~~~-~~~~~~~~~~q 579 (582)
T 3b5x_A 554 GEIIERGRHADLLAQ-DGAYAQLHRIQ 579 (582)
T ss_pred CEEEEECCHHHHHHC-CCHHHHHHHHH
T ss_conf 989997789999848-85899999986
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=659.58 Aligned_cols=563 Identities=21% Similarity=0.258 Sum_probs=454.7
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCC----CCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999840126899999999999999743567888740123---4455----22023357875657899999999999
Q 000475 879 VYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK---RKVS----REQLIGVFIFLSGGSSFFILGRAVLL 951 (1470)
Q Consensus 879 ~y~~y~~~~~g~~~~~~i~~~~~~~~~~~i~~~~wl~~~~~~~---~~~~----~~~~i~~y~~l~~~~~~~~~~~~~~~ 951 (1470)
.++.|++...+ .+ .+.+++.++..++....++++.+..+.. ...+ ...+...++++.+...++.+.+.+..
T Consensus 9 ~l~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (595)
T 2yl4_A 9 KLLGLAYPERR-RL-AAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLM 86 (595)
T ss_dssp HHHHHHGGGHH-HH-HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999887899-99-99999999999999999999999999997357402667999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999983487333234671348999840011101106899999999999999999999998679999
Q 000475 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1470)
Q Consensus 952 ~~~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrIlnR~s~D~~~id~~i~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~ 1031 (1470)
...+.+...+++.++++++++.|++||+++++|++++|+++|++.++..+...+..++..++.+++.+++++.++|++.+
T Consensus 87 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 166 (595)
T 2yl4_A 87 QTSGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLAT 166 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998199999777984889999999999999999999999999999999999999998199999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 99999999999988545565677899999999999999835101048789985501489886030889999999999998
Q 000475 1032 LFLVILGISIWYQVVNTARCHYLLQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDY 1111 (1470)
Q Consensus 1032 i~ip~~~l~~~~~~~~~~~~~~~l~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~ 1111 (1470)
+.+..+++.+.+. .++.+..+...+......+...+++.|++.|+.+||+|+.|+++.+++.+..+..
T Consensus 167 i~l~~~~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~ 234 (595)
T 2yl4_A 167 FVLSVVPPVSIIA------------VIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHV 234 (595)
T ss_dssp HHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 9999999999999------------9999999999999999999999999999811999998375699999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77799999675799999999999999999999-97612787698899999999999999999999999999996517999
Q 000475 1112 SCVTFHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVER 1190 (1470)
Q Consensus 1112 ~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~~~~le~~~~sveR 1190 (1470)
.+..........|......++..+.......+ ......+.+++|.......|...+...+..+...+..+.....+.+|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~r 314 (595)
T 2yl4_A 235 MQLARKEAFARAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGR 314 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999998699789999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCC-EEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 99973399988633479999999999873-7999689884799-894022115885189399999899999889999984
Q 000475 1191 ILQFTNIPSEAPLVIKNSRPSPEWPSSGK-IELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALF 1268 (1470)
Q Consensus 1191 i~~~~~~~~E~~~~~~~~~~~~~wp~~g~-I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrTGSGKSTLi~~L~ 1268 (1470)
+.++.+.++|.+.. ...++ ..+..+. |+++|++++|+.+ ..++|+|+||++++||++|||||||||||||+++|.
T Consensus 315 i~~~l~~~~~~~~~--~~~~~-~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~ 391 (595)
T 2yl4_A 315 LWELLEREPKLPFN--EGVIL-NEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLL 391 (595)
T ss_dssp HHHHHTCCCSSCSS--CSBCC-CTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHT
T ss_pred HHHHHCCCCCCCCC--CCCCC-CCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 99998389766777--78777-7678998389998899858998881201127998499889998999997999999982
Q ss_pred CCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC----CCCHHHHHHHHHHCCCHHHHHHCCC
Q ss_conf 177799758999697279999788742418982677777665777038699----9999999999998491999984001
Q 000475 1269 RVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE----QHSDQEIWEVINKCHLAEIVRQDQR 1344 (1470)
Q Consensus 1269 rl~~p~~G~I~IDG~dI~~i~l~~LRs~isiIPQdp~LF~gTIR~NLdp~~----~~sD~eI~~aL~~~~L~~~i~~lp~ 1344 (1470)
|+++|++|+|.+||.|+.+++.+++|++++++||+|.+|++|+++|+.... ..++++++++++.+++++++..+|+
T Consensus 392 g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 471 (595)
T 2yl4_A 392 RLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQ 471 (595)
T ss_dssp TSSCCSEEEEEETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSS
T ss_pred CCCCCCCCEEEECCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCC
T ss_conf 58578983799999981117999997322898368832687799998405877665689999999998697999974732
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEE
Q ss_conf 34763457999889259999999998703998899846678999997999999999865993789971491334202989
Q 000475 1345 LLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLV 1424 (1470)
Q Consensus 1345 gLdt~v~e~G~nLS~GQRQll~LARALLr~~~ILiLDEaTSslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrV 1424 (1470)
|+|+.++|+|.+||||||||++||||++++|+|++||||||++|++++..+++.|++..+++|+|+||||++++..||+|
T Consensus 472 g~~~~~~~~~~~LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i 551 (595)
T 2yl4_A 472 GFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMV 551 (595)
T ss_dssp GGGCBCSSSSCCCCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEE
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEE
T ss_conf 01350168878689999999999999975999999988666899899999999999996599799994687899759989
Q ss_pred EEEECCEEEEECCHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 9995987989459347861199869999999983
Q 000475 1425 LVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLR 1458 (1470)
Q Consensus 1425 lVL~~G~ivE~g~p~~Ll~~~~s~f~~lv~~~~~ 1458 (1470)
++|++|+++|.|+|++|++++++.|+++++....
T Consensus 552 ~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~q~~ 585 (595)
T 2yl4_A 552 AVLDQGKITEYGKHEELLSKPNGIYRKLMNKQSF 585 (595)
T ss_dssp EEEETTEEEEEECSCC------C-----------
T ss_pred EEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHC
T ss_conf 9998998999788999974787299999997430
Done!