Query 000481
Match_columns 1467
No_of_seqs 506 out of 5806
Neff 7.5
Searched_HMMs 29240
Date Tue Mar 26 17:37:29 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000481.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_258-261//hhsearch_pdb/000481hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1651.3 117.1 1226 217-1450 1-1315(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1323.9 108.0 1162 276-1451 47-1270(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 780.7 66.8 514 936-1451 137-653 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 741.9 52.1 513 936-1450 109-624 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 705.8 56.0 561 886-1453 25-592 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 700.9 61.5 561 886-1451 11-578 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 683.4 59.0 508 939-1449 65-574 (578)
8 3b60_A Lipid A export ATP-bind 1.0 1 1 678.7 68.0 558 886-1450 13-578 (582)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 676.3 70.6 559 886-1451 13-579 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 668.3 66.7 538 911-1451 30-583 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1651.28 Aligned_cols=1226 Identities=20% Similarity=0.243 Sum_probs=916.7
Q ss_pred HHHHHC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC---------CCCCCCHHHHHHHHH-HHHHHHHHHHH
Q ss_conf 998032-6998889999999458289999999999999987202---------799983089999999-76879999999
Q 000481 217 LLSLGY-SKPLALEDIPSLVPEDEASFAYQKFAYAWDSLVRENN---------SNNNGNLVRKVITNV-YLKENIFIAIC 285 (1467)
Q Consensus 217 l~~~g~-~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~~~---------~~~~~~~l~~~l~~~-~~~~~~~~~~~ 285 (1467)
+++.|. |++|+..|.+.+.|+|..+...+.+++.|.+..++.. ++..++.-++.|++. -++++++..+.
T Consensus 1 ~~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Lfrya~~~d~~l~~~g 80 (1321)
T 4f4c_A 1 MLRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVSIPQLYRYTTTLEKLLLFIG 80 (1321)
T ss_dssp ---CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCCHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHH
T ss_conf 98773100687635445679501110000113454243554334310012232025687799997315676789999999
Q ss_pred HHHHHHHHHHHHHH---HHHHHHHHC-------CC--------CC----CHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999---999999703-------89--------84----45789-9999999999999999999999999
Q 000481 286 ALLRTIAVVVGPLL---LYAFVNYSN-------RG--------EE----NLQEG-LSIVGCLIITKVVESFTQRHCFFGS 342 (1467)
Q Consensus 286 ~l~~~~~~~~~P~l---l~~li~~~~-------~~--------~~----~~~~g-~~l~~~l~~~~~~~~~~~~~~~~~~ 342 (1467)
.++..+.+.+.|++ +..+++.+. .. .. ..... ..++..++...++..++.....+..
T Consensus 81 ~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~ 160 (1321)
T 4f4c_A 81 TLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCY 160 (1321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997010001454300034431001689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999973893336789988999999969999930777-9889999999999999999999978899
Q 000481 343 RRSGMRMRSALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEFPF-WFHLTWSLALQLFLAIGVLFGVVGLGAL 421 (1467)
Q Consensus 343 ~~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~~i~~~~~-~~~~~w~~plqi~i~~~~L~~~lG~~~l 421 (1467)
..+|.|+-..+...+|+|.++++....++.++|+++|++++|++++.++.. .+..++..++.++.++++++..-...++
T Consensus 161 ~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~l~l 240 (1321)
T 4f4c_A 161 LYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQLTL 240 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999997889899879984899999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999989999999999999999999999999999956999998161999999999999999999999999999
Q 000481 422 PGLVLFLICGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIESRREKEFKWLSEAQLRKA 501 (1467)
Q Consensus 422 ~gl~v~~i~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~Ik~IK~~~wE~~f~~~i~~~R~~El~~l~~~~~~~~ 501 (1467)
+.++++.+..++...+++...+..++.++..+++.+.++|.++|||+||+|+||+.+.++..+..++..+.-.+.....+
T Consensus 241 v~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1321)
T 4f4c_A 241 VMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFLG 320 (1321)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999983999998214299999999999999999999999999
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-C
Q ss_conf 9989-9989999999999999998479777688999999999999999999999999999999999999998437789-9
Q 000481 502 YGTV-IYWMSPTIISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHEL-N 579 (1467)
Q Consensus 502 ~~~~-~~~~~p~~v~~~~f~~~~l~~~~~Lt~~~~ft~l~lf~~l~~pl~~lp~~i~~~~~a~vS~~Ri~~fL~~~e~-~ 579 (1467)
.... ..........++.+.+..++.++.++++.+|+++.++..+..|+..++..+..+.++.+|++||.+||+.++. +
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 400 (1321)
T 4f4c_A 321 ISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPVID 400 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999999599869999999999999999999899999999999999999999971785345
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-
Q ss_conf 7200002346899848999679983899998732212588418809999678988957899998388888872899839-
Q 000481 580 NDDVRRISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG- 658 (1467)
Q Consensus 580 ~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llGe~~~~~G~i~~~g- 658 (1467)
..........+..+.|+++|++|+|+..++.|+|+|+||++++|++++|||++|||||||+++|+|++++.+|+|.++|
T Consensus 401 ~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~~~G~I~idG~ 480 (1321)
T 4f4c_A 401 SSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITIDGV 480 (1321)
T ss_dssp CSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCCSEEEEEETTE
T ss_pred CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 66655656778887679998554079999874333318862288278998058985778888754565164486157996
Q ss_pred ------------EEEEECCCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf ------------0999826776798878899704999-999999999999430698832999997313679876691799
Q 000481 659 ------------SIAYVSQTSWIQSGSIRDNILYGKP-MDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQK 725 (1467)
Q Consensus 659 ------------~iayv~Q~~wi~~~TireNIlfg~~-~~~~~y~~vi~~c~L~~dl~~l~~GD~T~IGe~G~~LSGGQk 725 (1467)
+||||+|+||++++||||||+||++ .+++++.++++.|++++|++.||+||+|+|||+|.+||||||
T Consensus 481 ~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vGe~G~~LSGGQk 560 (1321)
T 4f4c_A 481 DVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQK 560 (1321)
T ss_dssp ETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEESSSSCCCCHHHH
T ss_pred CCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCHHHH
T ss_conf 50112599985046665875332078616788641552209999999987565468870888886075589887777787
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999998715998999808777669999999999999782399689998269431310798999939938683396889
Q 000481 726 QRIQLARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQEL 805 (1467)
Q Consensus 726 qRi~LARAly~~~~i~lLDdp~salD~~~~~~if~~~~~~~l~~kT~ilvTh~~~~l~~~d~i~~l~~G~i~~~G~~~el 805 (1467)
|||+||||+|++|+||+|||||||||+++++ ++++++.+.+++||+|+|||+++.++.||+|++|++|+|+++|+|+||
T Consensus 561 QRiaiARAl~~~~~IliLDE~tSaLD~~te~-~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G~ive~Gth~eL 639 (1321)
T 4f4c_A 561 QRIAIARALVRNPKILLLDEATSALDAESEG-IVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRAL 639 (1321)
T ss_dssp HHHHHHHHHTTCCSEEEEESTTTTSCTTTHH-HHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHH-HHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECCEEECCCCHHHH
T ss_conf 9999999872599989984554468878999-999999998479889997363878986898999639965136899999
Q ss_pred HHCCCHHHHHHHHHHHHCC-----CCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH----
Q ss_conf 8607138999997321013-----7999-98888898310012577889999998887778754322224677624----
Q 000481 806 LLAGTAFEQLVNAHRDAIT-----GLGP-LDNAGQGGAEKVEKGRTARPEEPNGIYPRKESSEGEISVKGLTQLTE---- 875 (1467)
Q Consensus 806 ~~~~~~~~~l~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---- 875 (1467)
++.++.|.++++.+..... +... .++.........+.... ...+..........+. ..........+
T Consensus 640 ~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 716 (1321)
T 4f4c_A 640 MAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSR-QASEMDDIMNRVRSST--IGSITNGPVIDEKEE 716 (1321)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHCC-----------------------------------------------------C
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCHHHHHHCCC--CCCCCCCCCHHHHHH
T ss_conf 9853279999996221222233233443322321112222234222-2222110221110132--124567740257775
Q ss_pred -----------HHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCC---CCHHHH
Q ss_conf -----------7776508612999999999600348999999999999885333467888630----3676---612489
Q 000481 876 -----------DEEMEIGDVGWKPFMDYLNVSKGMSLLCLGVLAQSGFVGLQAAATYWLAYAI----QIPK---ITSGIL 937 (1467)
Q Consensus 876 -----------~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~----~~~~---~~~~~~ 937 (1467)
++.++.|..++..++.|......+..+.+.+++............+|+..|. ..+. ....+|
T Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1321)
T 4f4c_A 717 RIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFW 796 (1321)
T ss_dssp CCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHH
T ss_pred HCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 31540389999999970786310999999987789999999999999999999999999999987517934556678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999989999999999999999999999999999999986145644444--560137999720265866100488999
Q 000481 938 IGVYAGVSTASAVFVYFRSFFAAHLGLKASKAFFSGFTNSIFKAPMLFFDS--TPVGRILTRLSSDLSILDFDIPFSIVF 1015 (1467)
Q Consensus 938 l~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~~p~~ffd~--~p~G~ilnR~s~Di~~id~~l~~~l~~ 1015 (1467)
..+|.+++++..++.+++.++....+.++++++|.+++++++++|++|||+ +|+|+++||+++|++.+|..++..+..
T Consensus 797 ~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~ 876 (1321)
T 4f4c_A 797 ALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFST 876 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999998887349933321678884888850250599999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCHHH
Q ss_conf 99999999999999998869999999999999999999999999999998632242057699997410699987052799
Q 000481 1016 VAASGTELLAIIGIMTFVTWQVLVVAIFAMVAVRFVQRYYIATARELIRINGTTKAPVMNYTAETSQGVVTIRAFNMVDR 1095 (1467)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~y~~~sr~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~ 1095 (1467)
++..++.+++.++++++.+|.+.++++++++++.+...++.+..+...+......++...++.|+++|+.+||+|+++++
T Consensus 877 ~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~ 956 (1321)
T 4f4c_A 877 VITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDT 956 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHH
T ss_pred HHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 99986537777022137868999999998889999999999999999999999988898899999962798886141488
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCC--CCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999987899999898899999999999999999-9999876267--43687999999999999999999999
Q 000481 1096 FFQNYLKLVDIDASLFFHTNGVMEWLILRVEALQNLTLFTA-ALFLVLIPRG--YVAPGLVGLSLSYAFTLTGTQVFLSR 1172 (1467)
Q Consensus 1096 f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~i~~~~~~~~-~~~~~l~~~~--~i~~g~~g~~l~y~~~l~~~l~~~~~ 1172 (1467)
+.+++.+..+...+..+.......+.......+..+....+ .+...++..+ .+.++.+...+.+......++.++.+
T Consensus 957 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1036 (1321)
T 4f4c_A 957 FYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATS 1036 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999987578875376542147899999999877889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCC-CCCEECEEEEEECCCEEEEECC
Q ss_conf 999999976699999984319999998767999999899764089998788857999-9620000389618959999949
Q 000481 1173 WYCYLANYIISVERIKQFMHIPPEPPAIVEDKRPPSSWPFKGRIELRQLKIRYRPNA-PLVLKGITCTFSEGTRVGVVGR 1251 (1467)
Q Consensus 1173 ~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vLk~isl~I~~GekvgIVGr 1251 (1467)
.+.+++..+.+++|+.++.+.++|.+ +...++..||..|.|+|+||+|+|+.+. .+||||+||+|+||||||||||
T Consensus 1037 ~~~~~~~~~~a~~ri~~~l~~~~~~~---~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~ 1113 (1321)
T 4f4c_A 1037 YFPEYAKATFAGGIIFGMLRKISKID---SLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGP 1113 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCSSC---TTCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECC
T ss_conf 99999999999998999860766577---766778788888818999879857999988212451699889899999899
Q ss_pred CCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHC----CCCCCCCHHHHHHHHH
Q ss_conf 999588999988414679863699979517999978885215786267754665567714----9999999999999999
Q 000481 1252 TGSGKTTLISALFRLVEPAGGSILIDGVDICSMGLKDLRVKLSIIPQEPTLFRGSVRTNL----DPLGLYSDDEIWKALE 1327 (1467)
Q Consensus 1252 TGSGKSTL~~~L~rl~~~~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NL----dp~~~~sd~ei~~aL~ 1327 (1467)
||||||||+++|+|+|+|++|+|.|||+||+++++++||++|++|||||+||+||||+|| || .+++|+|+|+||+
T Consensus 1114 SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~-~~~sd~ei~~Al~ 1192 (1321)
T 4f4c_A 1114 SGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDP-SSVTMAQVEEAAR 1192 (1321)
T ss_dssp TTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCT-TTSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCC-CCCCHHHHHHHHH
T ss_conf 998199999999568638997899999986549999998545998789973272399997454999-9999999999999
Q ss_pred HCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 83881477307787654234688888906999999999860699889995788899999799999999977499379997
Q 000481 1328 KCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITV 1407 (1467)
Q Consensus 1328 ~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTs~lD~~Td~~Iq~~ir~~f~~~TvI~I 1407 (1467)
.++++++|.++|+||||.|+|+|.|||||||||||||||+||+|+|||||||||++|++||+.||++|++.+++||+|+|
T Consensus 1193 ~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~~~~TvI~I 1272 (1321)
T 4f4c_A 1193 LANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCIVI 1272 (1321)
T ss_dssp HTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTSSSSEEEEE
T ss_pred HHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 82984999717678999823889156999999999999997179989996811157899999999999997399989996
Q ss_pred CCCCHHHCCCCEEEEEECCEEEEECCHHHHHCCCCHHHHHHHH
Q ss_conf 2491001124989999598897824923784039806999999
Q 000481 1408 AHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMETNSSFSKLVAE 1450 (1467)
Q Consensus 1408 AHRl~ti~~~DrIlVld~G~i~E~g~p~~Ll~~~~~f~~l~~~ 1450 (1467)
|||++||++||||+|||+|+|+|+|+|++|++++|.|++|++.
T Consensus 1273 AHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~~g~y~~L~~~ 1315 (1321)
T 4f4c_A 1273 AHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSEKGAYYKLTQK 1315 (1321)
T ss_dssp CSSSSTTTTCSEEEEESSSSEEEEECHHHHHHCC---------
T ss_pred CCCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHH
T ss_conf 0689999969999999898999988889998498099999999
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1323.88 Aligned_cols=1162 Identities=19% Similarity=0.227 Sum_probs=835.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCC---------H-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68799999999999999999999999999970389---------844---------5-7899999999999999999999
Q 000481 276 LKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRG---------EEN---------L-QEGLSIVGCLIITKVVESFTQR 336 (1467)
Q Consensus 276 ~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~---------~~~---------~-~~g~~l~~~l~~~~~~~~~~~~ 336 (1467)
+..+++..++.++..++....|+++..+++..... ... . .....++..++...++..++..
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (1284)
T 3g5u_A 47 RLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAY 126 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999998613444332222221111100244688999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHH-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999738933367899889999999699999307779-889999999999999999999
Q 000481 337 HCFFGSRRSGMRMRSALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEFPFW-FHLTWSLALQLFLAIGVLFGV 415 (1467)
Q Consensus 337 ~~~~~~~~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~ivnlms~D~~~i~~~~~~-~~~~w~~plqi~i~~~~L~~~ 415 (1467)
...+...+.+.++-..+...+|+|.++++....++.++|+++|+++.|++.+.+.... +..+....+.++.++++++..
T Consensus 127 ~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 206 (1284)
T 3g5u_A 127 IQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTR 206 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999998699899756887789999998899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97889999999999999989999999999999999999999999999956999998161999999999999999999999
Q 000481 416 VGLGALPGLVLFLICGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIESRREKEFKWLSE 495 (1467)
Q Consensus 416 lG~~~l~gl~v~~i~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~Ik~IK~~~wE~~f~~~i~~~R~~El~~l~~ 495 (1467)
-...+++.++++.++..+...+.+...+..++.++..++......|.++||++||.|++|+.+.++..+.-++-.+.-.+
T Consensus 207 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~~~~~ 286 (1284)
T 3g5u_A 207 GWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRLGIK 286 (1284)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999999999999999999999999999999978799998465399999999999999999999
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999-89998999999999999999847977768899999999999999999999999999999999999999843
Q 000481 496 AQLRKAYG-TVIYWMSPTIISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLL 574 (1467)
Q Consensus 496 ~~~~~~~~-~~~~~~~p~~v~~~~f~~~~l~~~~~Lt~~~~ft~l~lf~~l~~pl~~lp~~i~~~~~a~vS~~Ri~~fL~ 574 (1467)
.....+.. .+..........++.+.+..++..+.++++.+++.+..+.....|+..+...+..+.++..+.+|+.++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~ 366 (1284)
T 3g5u_A 287 KAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIID 366 (1284)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999999999999999299889999999999999999999999999999999999999999972
Q ss_pred CCCC-CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 7789-972000023468998489996799838999987322125884188099996789889578999983888888728
Q 000481 575 DHEL-NNDDVRRISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGT 653 (1467)
Q Consensus 575 ~~e~-~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llGe~~~~~G~ 653 (1467)
.++. ++.......++...+.|+++|++|+|+.+.+.++|+|+||++++|+.++|+|++|||||||+++|+|++++.+|+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~g~~~~~~G~ 446 (1284)
T 3g5u_A 367 NKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLDGM 446 (1284)
T ss_dssp CCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHTTTSSCCSEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEE
T ss_conf 89867766656777777777189999899769999871012545897599889998999997999999980788999738
Q ss_pred EEECC-------------EEEEECCCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99839-------------0999826776798878899704999-999999999999430698832999997313679876
Q 000481 654 VNLYG-------------SIAYVSQTSWIQSGSIRDNILYGKP-MDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLN 719 (1467)
Q Consensus 654 i~~~g-------------~iayv~Q~~wi~~~TireNIlfg~~-~~~~~y~~vi~~c~L~~dl~~l~~GD~T~IGe~G~~ 719 (1467)
|.++| .|+||+|+||++++||+|||.||.+ .+++++.++++.|++.++++.+|+|++|.+||+|.+
T Consensus 447 i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 526 (1284)
T 3g5u_A 447 VSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQFDTLVGERGAQ 526 (1284)
T ss_dssp EEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGGGCCCSSSSCS
T ss_pred EEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99999987757999998654898688753776699997457989999999999998296999974656334501478786
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEEEECCEEEEE
Q ss_conf 69179999999998715998999808777669999999999999782399689998269431310798999939938683
Q 000481 720 LSGGQKQRIQLARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQS 799 (1467)
Q Consensus 720 LSGGQkqRi~LARAly~~~~i~lLDdp~salD~~~~~~if~~~~~~~l~~kT~ilvTh~~~~l~~~d~i~~l~~G~i~~~ 799 (1467)
|||||||||+||||++++|+|++||||+|+||+++++.+. +++....+++|+|+|||+++.+..+|+|++|++|+|++.
T Consensus 527 LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~-~~l~~~~~~~t~i~itH~l~~i~~~d~i~vl~~G~i~~~ 605 (1284)
T 3g5u_A 527 LSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQ-AALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVEQ 605 (1284)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHH-HHHHHHHTTSEEEEECSCHHHHTTCSEEEECSSSCCCCE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEE
T ss_conf 5999999999999995299989997987777999999999-999997399989999407789974998999989999997
Q ss_pred CCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCHHH
Q ss_conf 396889860713899999732101379999888889831001257788999999888777875432--222467762477
Q 000481 800 GNYQELLLAGTAFEQLVNAHRDAITGLGPLDNAGQGGAEKVEKGRTARPEEPNGIYPRKESSEGEI--SVKGLTQLTEDE 877 (1467)
Q Consensus 800 G~~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~e 877 (1467)
|+++|+++.++.|.++...+............. ................ .............. ..........+|
T Consensus 606 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1284)
T 3g5u_A 606 GNHDELMREKGIYFKLVMTQTAGNEIELGNEAC--KSKDEIDNLDMSSKDS-GSSLIRRRSTRKSICGPHDQDRKLSTKE 682 (1284)
T ss_dssp ECHHHHHHTTSHHHHHHHHTC-----------------------------------------------------------
T ss_pred CCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 889999867877999999743002211133333--3222223443333333-3200034543334456422332110245
Q ss_pred HHH--CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHCCCCC-----CCHHHHHHHHHHHHH
Q ss_conf 765--08612999999999600348999999999999885333467----8886303676-----612489999999989
Q 000481 878 EME--IGDVGWKPFMDYLNVSKGMSLLCLGVLAQSGFVGLQAAATY----WLAYAIQIPK-----ITSGILIGVYAGVST 946 (1467)
Q Consensus 878 ~~~--~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----wl~~~~~~~~-----~~~~~~l~iy~~l~~ 946 (1467)
+.+ ....++..+++|.+.......+ .+++.+...+......+ |+..+..... .....+..+|.++++
T Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i 760 (1284)
T 3g5u_A 683 ALDEDVPPASFWRILKLNSTEWPYFVV--GIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGI 760 (1284)
T ss_dssp -CCCCCSCCCTTHHHHHHHHTCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHCCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 553136625899999984515799999--999999999999999999999999985568503367799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999998614564444--4560137999720265866100488999999999999
Q 000481 947 ASAVFVYFRSFFAAHLGLKASKAFFSGFTNSIFKAPMLFFD--STPVGRILTRLSSDLSILDFDIPFSIVFVAASGTELL 1024 (1467)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~~p~~ffd--~~p~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~~ 1024 (1467)
...++.+.+.+.....+.+...++|.+++++++++|++||| .+|+|+++||+++|++.++..++..+..++..++.++
T Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~ 840 (1284)
T 3g5u_A 761 ISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLG 840 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999839988875789988999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCHHHHHHHHH
Q ss_conf 99999998869999999---999999999999999999999998632242057699997410699987052799999999
Q 000481 1025 AIIGIMTFVTWQVLVVA---IFAMVAVRFVQRYYIATARELIRINGTTKAPVMNYTAETSQGVVTIRAFNMVDRFFQNYL 1101 (1467)
Q Consensus 1025 ~~~~~~~~~~~~~~~v~---i~~~~~~~~~~~~y~~~sr~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~~~~ 1101 (1467)
..+++++..+|.+.+++ +|+++++.++...+.... .+......+....++.|+++|+.+||+|++++++.+++.
T Consensus 841 ~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~ 917 (1284)
T 3g5u_A 841 TGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQ---ALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYA 917 (1284)
T ss_dssp HHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 99999999969999999999999999999999999999---999999999999999999988999998465999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999987899999898899999999999999999999----98762674368799999999999999999999999999
Q 000481 1102 KLVDIDASLFFHTNGVMEWLILRVEALQNLTLFTAALF----LVLIPRGYVAPGLVGLSLSYAFTLTGTQVFLSRWYCYL 1177 (1467)
Q Consensus 1102 ~~~d~~~~~~~~~~~~~~wl~~rl~~i~~~~~~~~~~~----~~l~~~~~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~l 1177 (1467)
+..+...+.... ...|......+...+..+..++. ..++..+.++.+.+...+.+......++..+...+..+
T Consensus 918 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1284)
T 3g5u_A 918 QSLQIPYRNAMK---KAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDY 994 (1284)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCS
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999---99999999999999999999999999999999098069999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCEECEEEEEECCCEEEEECCCCCCH
Q ss_conf 997669999998431999999876799999989976408999878885799-9962000038961895999994999958
Q 000481 1178 ANYIISVERIKQFMHIPPEPPAIVEDKRPPSSWPFKGRIELRQLKIRYRPN-APLVLKGITCTFSEGTRVGVVGRTGSGK 1256 (1467)
Q Consensus 1178 e~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vLk~isl~I~~GekvgIVGrTGSGK 1256 (1467)
.....+++|+.++.+.+++.....+ .+...++..|.|+|+||+|+|+.. ..++|+|+||+|++||++||||+|||||
T Consensus 995 ~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGK 1072 (1284)
T 3g5u_A 995 AKATVSASHIIRIIEKTPEIDSYST--QGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGK 1072 (1284)
T ss_dssp THHHHHHHHHHHHHHSCCSSSSCCS--SCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSSTTH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCCCCH
T ss_conf 9999999999999838876666555--66545677785799998997799998700203059976998899988999978
Q ss_pred HHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCC---CCCCHHHHHHHHHHCCCCH
Q ss_conf 8999988414679863699979517999978885215786267754665567714999---9999999999999838814
Q 000481 1257 TTLISALFRLVEPAGGSILIDGVDICSMGLKDLRVKLSIIPQEPTLFRGSVRTNLDPL---GLYSDDEIWKALEKCQLKT 1333 (1467)
Q Consensus 1257 STL~~~L~rl~~~~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~---~~~sd~ei~~aL~~~~L~~ 1333 (1467)
|||+++|+|+++|++|+|.+||+|+++++++++|+++++|||||.+|++|||+|+... ...++++++++++.+++++
T Consensus 1073 STl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~~~ 1152 (1284)
T 3g5u_A 1073 STVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQ 1152 (1284)
T ss_dssp HHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHH
T ss_conf 99999994686789977989999800078999970268987787406666999974668778999999999999839599
Q ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHH
Q ss_conf 77307787654234688888906999999999860699889995788899999799999999977499379997249100
Q 000481 1334 TISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPT 1413 (1467)
Q Consensus 1334 ~v~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTs~lD~~Td~~Iq~~ir~~f~~~TvI~IAHRl~t 1413 (1467)
++.++|+|+||.|+|+|.+||||||||+|||||++++|+||+||||||++|.+|++.|++.|++..+++|+|+||||+++
T Consensus 1153 ~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi~isH~l~~ 1232 (1284)
T 3g5u_A 1153 FIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLST 1232 (1284)
T ss_dssp HHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEEEECSCTTG
T ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHH
T ss_conf 99727042456117888933899999999999997499999986875557999999999999986799989999558799
Q ss_pred HCCCCEEEEEECCEEEEECCHHHHHCCCCHHHHHHHHH
Q ss_conf 11249899995988978249237840398069999999
Q 000481 1414 VIDSDMVMVLSYGKLLEYDEPSKLMETNSSFSKLVAEY 1451 (1467)
Q Consensus 1414 i~~~DrIlVld~G~i~E~g~p~~Ll~~~~~f~~l~~~~ 1451 (1467)
+.+||||+||++|+++|+|+|++|++++|.|++|+...
T Consensus 1233 i~~~dri~vl~~G~i~~~g~~~~l~~~~g~y~~l~~~q 1270 (1284)
T 3g5u_A 1233 IQNADLIVVIQNGKVKEHGTHQQLLAQKGIYFSMVSVQ 1270 (1284)
T ss_dssp GGSCSEEEEEETBEEEEEECHHHHHHSCSHHHHHHHHH
T ss_pred HHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHH
T ss_conf 98099899998998999778999984777799999997
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=780.74 Aligned_cols=514 Identities=20% Similarity=0.264 Sum_probs=447.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999989999999999999999999999999999999986145644444560137999720265866100488999
Q 000481 936 ILIGVYAGVSTASAVFVYFRSFFAAHLGLKASKAFFSGFTNSIFKAPMLFFDSTPVGRILTRLSSDLSILDFDIPFSIVF 1015 (1467)
Q Consensus 936 ~~l~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~~p~~ffd~~p~G~ilnR~s~Di~~id~~l~~~l~~ 1015 (1467)
.+...|++++++..++.++..+++.+.+.+...++|.++++++++.|++|||++++|++++|+++|++.++..+...+..
T Consensus 137 ~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~ 216 (1321)
T 4f4c_A 137 NVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGM 216 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999997889899879984899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCHHH
Q ss_conf 99999999999999998869999999999999999999999999999998632242057699997410699987052799
Q 000481 1016 VAASGTELLAIIGIMTFVTWQVLVVAIFAMVAVRFVQRYYIATARELIRINGTTKAPVMNYTAETSQGVVTIRAFNMVDR 1095 (1467)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~y~~~sr~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~ 1095 (1467)
++..++.+++.++++++.+|.+.++++..+++..++..++.+..+...+......+...+++.|+++|+.+||+|++|+.
T Consensus 217 ~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 296 (1321)
T 4f4c_A 217 AFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRY 296 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999983999998214299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999987899999898899999999999999999-99998762674368799999999999999999999999
Q 000481 1096 FFQNYLKLVDIDASLFFHTNGVMEWLILRVEALQNLTLFTA-ALFLVLIPRGYVAPGLVGLSLSYAFTLTGTQVFLSRWY 1174 (1467)
Q Consensus 1096 f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~i~~~~~~~~-~~~~~l~~~~~i~~g~~g~~l~y~~~l~~~l~~~~~~~ 1174 (1467)
+.+++.+..+...+..........+......++..+....+ .+...++..|.+++|.+..++.|...+..++..+...+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~ 376 (1321)
T 4f4c_A 297 ELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQL 376 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999599869999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECC-CCCCCEECEEEEEECCCEEEEECCCC
Q ss_conf 99999766999999843199999987679999998997640899987888579-99962000038961895999994999
Q 000481 1175 CYLANYIISVERIKQFMHIPPEPPAIVEDKRPPSSWPFKGRIELRQLKIRYRP-NAPLVLKGITCTFSEGTRVGVVGRTG 1253 (1467)
Q Consensus 1175 ~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~-~~~~vLk~isl~I~~GekvgIVGrTG 1253 (1467)
..+.....+.+|+.++++.+++.+... ...+...+.+|.|+|+||+|+|+. ...++|+|+||+|+|||++||||+||
T Consensus 377 ~~~~~~~~s~~ri~~~l~~~~~~~~~~--~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sG 454 (1321)
T 4f4c_A 377 AVLGTAQGAASGIYEVLDRKPVIDSSS--KAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSG 454 (1321)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCSSCSS--SCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCC
T ss_conf 999999999999999971785345666--556567788876799985540799998743333188622882789980589
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCC
Q ss_conf 95889999884146798636999795179999788852157862677546655677149999-99999999999983881
Q 000481 1254 SGKTTLISALFRLVEPAGGSILIDGVDICSMGLKDLRVKLSIIPQEPTLFRGSVRTNLDPLG-LYSDDEIWKALEKCQLK 1332 (1467)
Q Consensus 1254 SGKSTL~~~L~rl~~~~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~-~~sd~ei~~aL~~~~L~ 1332 (1467)
||||||+++|.|+|+|.+|+|.+||+||++++++.+|++|++|||||+||+||||+||.... .++|+++++|++.|+++
T Consensus 455 sGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~ 534 (1321)
T 4f4c_A 455 CGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAE 534 (1321)
T ss_dssp SCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCH
T ss_conf 85778888754565164486157996501125999850466658753320786167886415522099999999875654
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCH
Q ss_conf 47730778765423468888890699999999986069988999578889999979999999997749937999724910
Q 000481 1333 TTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVP 1412 (1467)
Q Consensus 1333 ~~v~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTs~lD~~Td~~Iq~~ir~~f~~~TvI~IAHRl~ 1412 (1467)
++++.+|+|+||.|||+|.|||||||||||||||++++|+|||||||||++|++||+.|++.|++..+++|+|+||||++
T Consensus 535 ~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls 614 (1321)
T 4f4c_A 535 KFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLS 614 (1321)
T ss_dssp HHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTT
T ss_pred HHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 68870888886075589887777787999999987259998998455446887899999999999847988999736387
Q ss_pred HHCCCCEEEEEECCEEEEECCHHHHHCCCCHHHHHHHHH
Q ss_conf 011249899995988978249237840398069999999
Q 000481 1413 TVIDSDMVMVLSYGKLLEYDEPSKLMETNSSFSKLVAEY 1451 (1467)
Q Consensus 1413 ti~~~DrIlVld~G~i~E~g~p~~Ll~~~~~f~~l~~~~ 1451 (1467)
|+.+||+|+||++|+|+|.|+|+||++++|.|++|+...
T Consensus 615 ~i~~aD~Iivl~~G~ive~Gth~eL~~~~g~y~~l~~~q 653 (1321)
T 4f4c_A 615 TIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQ 653 (1321)
T ss_dssp TTTTCSEEEEEETTEEEEEECHHHHHTTTCHHHHHHHHH
T ss_pred HHHHCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 898689899963996513689999998532799999962
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=741.89 Aligned_cols=513 Identities=21% Similarity=0.273 Sum_probs=441.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999989999999999999999999999999999999986145644444560137999720265866100488999
Q 000481 936 ILIGVYAGVSTASAVFVYFRSFFAAHLGLKASKAFFSGFTNSIFKAPMLFFDSTPVGRILTRLSSDLSILDFDIPFSIVF 1015 (1467)
Q Consensus 936 ~~l~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~~p~~ffd~~p~G~ilnR~s~Di~~id~~l~~~l~~ 1015 (1467)
.+..+|.+++++..++.+++.++....+.+...++|.++++++++.|++|||++++|+++||+++|++.++..++..+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~ 188 (1284)
T 3g5u_A 109 TYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGM 188 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998699899756887789999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCHHH
Q ss_conf 99999999999999998869999999999999999999999999999998632242057699997410699987052799
Q 000481 1016 VAASGTELLAIIGIMTFVTWQVLVVAIFAMVAVRFVQRYYIATARELIRINGTTKAPVMNYTAETSQGVVTIRAFNMVDR 1095 (1467)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~y~~~sr~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~ 1095 (1467)
++..++.+++.++++++.+|.+.+++++.++++.++..++.+..+...+......++..+++.|+++|+.+||+|++|++
T Consensus 189 ~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~ 268 (1284)
T 3g5u_A 189 FFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKK 268 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999978799998465399
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999987899999898899999999999999999-99998762674368799999999999999999999999
Q 000481 1096 FFQNYLKLVDIDASLFFHTNGVMEWLILRVEALQNLTLFTA-ALFLVLIPRGYVAPGLVGLSLSYAFTLTGTQVFLSRWY 1174 (1467)
Q Consensus 1096 f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~i~~~~~~~~-~~~~~l~~~~~i~~g~~g~~l~y~~~l~~~l~~~~~~~ 1174 (1467)
+.+++.+..+...+..........+......++..+....+ .+...++..+.+++|.+..++.+......++..+...+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 348 (1284)
T 3g5u_A 269 ELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNI 348 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999299889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCEECEEEEEECCCEEEEECCCC
Q ss_conf 999997669999998431999999876799999989976408999878885799-9962000038961895999994999
Q 000481 1175 CYLANYIISVERIKQFMHIPPEPPAIVEDKRPPSSWPFKGRIELRQLKIRYRPN-APLVLKGITCTFSEGTRVGVVGRTG 1253 (1467)
Q Consensus 1175 ~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vLk~isl~I~~GekvgIVGrTG 1253 (1467)
..+.....+++|+.++.+.+++.+...+...++ .+..|.|+|+||+|+|+.+ ..++|+|+||+|++||++||||+||
T Consensus 349 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~--~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sG 426 (1284)
T 3g5u_A 349 EAFANARGAAYEVFKIIDNKPSIDSFSKSGHKP--DNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSG 426 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCC--TTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCC
T ss_conf 999999999999999972898677666567777--777771899998997699998710125458975998899989999
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCC
Q ss_conf 95889999884146798636999795179999788852157862677546655677149999-99999999999983881
Q 000481 1254 SGKTTLISALFRLVEPAGGSILIDGVDICSMGLKDLRVKLSIIPQEPTLFRGSVRTNLDPLG-LYSDDEIWKALEKCQLK 1332 (1467)
Q Consensus 1254 SGKSTL~~~L~rl~~~~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~-~~sd~ei~~aL~~~~L~ 1332 (1467)
||||||+++|.|+++|++|+|.+||.|+++++++++|+++++|||||.+|+||||+|+.... ..++++++++++.++++
T Consensus 427 sGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~ 506 (1284)
T 3g5u_A 427 CGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAY 506 (1284)
T ss_dssp SSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCH
T ss_conf 97999999980788999738999999877579999986548986887537766999974579899999999999982969
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCH
Q ss_conf 47730778765423468888890699999999986069988999578889999979999999997749937999724910
Q 000481 1333 TTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVP 1412 (1467)
Q Consensus 1333 ~~v~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTs~lD~~Td~~Iq~~ir~~f~~~TvI~IAHRl~ 1412 (1467)
+++.++|+|+||.++|+|.+||||||||+|||||++++|+|||||||||++|++|++.+++.++...+++|+|+||||++
T Consensus 507 ~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~ 586 (1284)
T 3g5u_A 507 DFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLS 586 (1284)
T ss_dssp HHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
T ss_conf 99974656334501478786599999999999999529998999798777799999999999999739998999940778
Q ss_pred HHCCCCEEEEEECCEEEEECCHHHHHCCCCHHHHHHHH
Q ss_conf 01124989999598897824923784039806999999
Q 000481 1413 TVIDSDMVMVLSYGKLLEYDEPSKLMETNSSFSKLVAE 1450 (1467)
Q Consensus 1413 ti~~~DrIlVld~G~i~E~g~p~~Ll~~~~~f~~l~~~ 1450 (1467)
++.+||+|+||++|+++|.|+|++|+++++.|++++..
T Consensus 587 ~i~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~ 624 (1284)
T 3g5u_A 587 TVRNADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMT 624 (1284)
T ss_dssp HHTTCSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHH
T ss_pred HHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHH
T ss_conf 99749989999899999978899998678779999997
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=705.84 Aligned_cols=561 Identities=22% Similarity=0.319 Sum_probs=472.1
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999960034899999999999988533346788863036----766-1248999999998999999999999999
Q 000481 886 WKPFMDYLNVSKGMSLLCLGVLAQSGFVGLQAAATYWLAYAIQI----PKI-TSGILIGVYAGVSTASAVFVYFRSFFAA 960 (1467)
Q Consensus 886 ~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~----~~~-~~~~~l~iy~~l~~~~~~~~~~~~~~~~ 960 (1467)
+..++.|++..++ .+.+.+++.++...+....++++....+. ... ....++.+++++.+...++.+.+.++..
T Consensus 25 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (598)
T 3qf4_B 25 LRRLLGYLRPHTF--TLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIML 102 (598)
T ss_dssp HHHHGGGTGGGHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999--99999999999999999999999999999973688899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999861456444445601379997202658661004889999999999999999999886999999
Q 000481 961 HLGLKASKAFFSGFTNSIFKAPMLFFDSTPVGRILTRLSSDLSILDFDIPFSIVFVAASGTELLAIIGIMTFVTWQVLVV 1040 (1467)
Q Consensus 961 ~~~~~~s~~l~~~l~~~il~~p~~ffd~~p~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v 1040 (1467)
..+.+...++|..+++++++.|++||+++++|+++||+++|++.++..+...+..++..++.+++.+++++..+|.+.++
T Consensus 103 ~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~ 182 (598)
T 3qf4_B 103 TLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLV 182 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999977999997688889999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999986322420576999974106999870527999999999999998789999989889
Q 000481 1041 AIFAMVAVRFVQRYYIATARELIRINGTTKAPVMNYTAETSQGVVTIRAFNMVDRFFQNYLKLVDIDASLFFHTNGVMEW 1120 (1467)
Q Consensus 1041 ~i~~~~~~~~~~~~y~~~sr~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1120 (1467)
.+..++++.++..++.+..++..+......+++.+++.|+++|+.+||+|++++.+.+++.+..+...+..........+
T Consensus 183 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (598)
T 3qf4_B 183 TLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGV 262 (598)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999997379999974870999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 999999999999999-9999987626743687999999999999999999999999999976699999984319999998
Q 000481 1121 LILRVEALQNLTLFT-AALFLVLIPRGYVAPGLVGLSLSYAFTLTGTQVFLSRWYCYLANYIISVERIKQFMHIPPEPPA 1199 (1467)
Q Consensus 1121 l~~rl~~i~~~~~~~-~~~~~~l~~~~~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~ 1199 (1467)
.....+++..+.... ..+...++..|.+++|.+..++.|...+..++..+...+..++....+++|+.++.+.++|.+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 342 (598)
T 3qf4_B 263 LPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDD 342 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999985997899999999999999999999999999999999999999999768877777
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEECEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 76799999989976408999878885799996200003896189599999499995889999884146798636999795
Q 000481 1200 IVEDKRPPSSWPFKGRIELRQLKIRYRPNAPLVLKGITCTFSEGTRVGVVGRTGSGKTTLISALFRLVEPAGGSILIDGV 1279 (1467)
Q Consensus 1200 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~isl~I~~GekvgIVGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~ 1279 (1467)
..+.+.++..|.|+++||+++|+++ .++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||.
T Consensus 343 ----~~~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~ 417 (598)
T 3qf4_B 343 ----PDAVELREVRGEIEFKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGI 417 (598)
T ss_dssp ----SSCCCCCSCCCCEEEEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTE
T ss_pred ----CCCCCCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCE
T ss_conf ----7777777777718999989977999-86012227998699889998999996999999994585799808999999
Q ss_pred ECCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 179999788852157862677546655677149999-9999999999998388147730778765423468888890699
Q 000481 1280 DICSMGLKDLRVKLSIIPQEPTLFRGSVRTNLDPLG-LYSDDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQR 1358 (1467)
Q Consensus 1280 dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1358 (1467)
|+++++.+++|++++++||||.+|++|+++|+.... ..++++++++++.+++++++..+|+|+||.++|+|.+||||||
T Consensus 418 ~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~ 497 (598)
T 3qf4_B 418 DIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQR 497 (598)
T ss_dssp EGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHH
T ss_pred EHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHH
T ss_conf 83018899998410899079823246399997447999999999999999697888974645323642278898799999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999998606998899957888999997999999999774993799972491001124989999598897824923784
Q 000481 1359 QLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLM 1438 (1467)
Q Consensus 1359 Qll~LARALLr~~~ILiLDEaTs~lD~~Td~~Iq~~ir~~f~~~TvI~IAHRl~ti~~~DrIlVld~G~i~E~g~p~~Ll 1438 (1467)
||+|||||++++|+||+||||||++|+++++.|++.+++..+++|+|+||||++++..||+|+||++|+++|.|+|++|+
T Consensus 498 Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~ 577 (598)
T 3qf4_B 498 QLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELI 577 (598)
T ss_dssp HHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHH
T ss_conf 99999999964999999989766799999999999999980899899994277899719989999899999877899998
Q ss_pred CCCCHHHHHHHHHHH
Q ss_conf 039806999999987
Q 000481 1439 ETNSSFSKLVAEYWS 1453 (1467)
Q Consensus 1439 ~~~~~f~~l~~~~~~ 1453 (1467)
++++.|++++.+...
T Consensus 578 ~~~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 578 QKRGFYYELFTSQYG 592 (598)
T ss_dssp HTTCHHHHHHHHHHG
T ss_pred HCCCHHHHHHHHHHH
T ss_conf 678779999999764
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=700.89 Aligned_cols=561 Identities=21% Similarity=0.281 Sum_probs=453.2
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCC---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999600348999999999999885333467888630367--661---248999999998999999999999999
Q 000481 886 WKPFMDYLNVSKGMSLLCLGVLAQSGFVGLQAAATYWLAYAIQIP--KIT---SGILIGVYAGVSTASAVFVYFRSFFAA 960 (1467)
Q Consensus 886 ~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~--~~~---~~~~l~iy~~l~~~~~~~~~~~~~~~~ 960 (1467)
++.+++|++...+.. .+.+++.++...+....++++..+.+.. ... ...+..+++++.+...++.+.+.++..
T Consensus 11 ~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (587)
T 3qf4_A 11 SKTLARYLKPYWIFA--VLAPLFMVVEVICDLSQPTLLARIVDEGIARGDFSLVLKTGILMLIVALIGAVGGIGCTVFAS 88 (587)
T ss_dssp CCCGGGGTGGGHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999--999999999999999999999999999873698799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999861456444445601379997202658661004889999999999999999999886999999
Q 000481 961 HLGLKASKAFFSGFTNSIFKAPMLFFDSTPVGRILTRLSSDLSILDFDIPFSIVFVAASGTELLAIIGIMTFVTWQVLVV 1040 (1467)
Q Consensus 961 ~~~~~~s~~l~~~l~~~il~~p~~ffd~~p~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v 1040 (1467)
+.+.+...++|.++++++++.|+.||+++++|+++||+++|++.++..+...+..++...+.+++.+++++..+|.+.++
T Consensus 89 ~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~ 168 (587)
T 3qf4_A 89 YASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSV 168 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999978897997658889999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999986322420576999974106999870527999999999999998789999989889
Q 000481 1041 AIFAMVAVRFVQRYYIATARELIRINGTTKAPVMNYTAETSQGVVTIRAFNMVDRFFQNYLKLVDIDASLFFHTNGVMEW 1120 (1467)
Q Consensus 1041 ~i~~~~~~~~~~~~y~~~sr~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1120 (1467)
++..+++...+..++.+..+...+......+.+.+++.|+++|+.+||+|++++.+.+++.+..+...+..........+
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (587)
T 3qf4_A 169 LIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVF 248 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998559999986214999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 999999999999999-9999987626743687999999999999999999999999999976699999984319999998
Q 000481 1121 LILRVEALQNLTLFT-AALFLVLIPRGYVAPGLVGLSLSYAFTLTGTQVFLSRWYCYLANYIISVERIKQFMHIPPEPPA 1199 (1467)
Q Consensus 1121 l~~rl~~i~~~~~~~-~~~~~~l~~~~~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~ 1199 (1467)
......++..+.... ..+...++..|.++.|.+..++.|...+..++..+...+..+.....+.+|+.++.+.+++.+.
T Consensus 249 ~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 328 (587)
T 3qf4_A 249 ALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEE 328 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999984993899999999999999999999999999999999999999999768976578
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEECEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 76799999989976408999878885799996200003896189599999499995889999884146798636999795
Q 000481 1200 IVEDKRPPSSWPFKGRIELRQLKIRYRPNAPLVLKGITCTFSEGTRVGVVGRTGSGKTTLISALFRLVEPAGGSILIDGV 1279 (1467)
Q Consensus 1200 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~isl~I~~GekvgIVGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~ 1279 (1467)
. ..+...++..|.|+++||+++|+++.+++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||+
T Consensus 329 ~---~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~ 405 (587)
T 3qf4_A 329 A---DNALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDEL 405 (587)
T ss_dssp C---TTCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSS
T ss_pred C---CCCCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf 8---7765668888807997889984899976421117998699889998999997999999992786699867989999
Q ss_pred ECCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 179999788852157862677546655677149999-9999999999998388147730778765423468888890699
Q 000481 1280 DICSMGLKDLRVKLSIIPQEPTLFRGSVRTNLDPLG-LYSDDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQR 1358 (1467)
Q Consensus 1280 dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1358 (1467)
|+++++.+++|++++++||||.+|++|+|||+.... .+++++++++++.+++.+++..+|+|+|+.++|+|.+||||||
T Consensus 406 ~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqr 485 (587)
T 3qf4_A 406 DVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQK 485 (587)
T ss_dssp BGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHH
T ss_pred ECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHH
T ss_conf 83407899998413897789867675599998524889999999999999684999975653121275189899299999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999998606998899957888999997999999999774993799972491001124989999598897824923784
Q 000481 1359 QLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLM 1438 (1467)
Q Consensus 1359 Qll~LARALLr~~~ILiLDEaTs~lD~~Td~~Iq~~ir~~f~~~TvI~IAHRl~ti~~~DrIlVld~G~i~E~g~p~~Ll 1438 (1467)
||+|||||++++|+||+||||||++|+++++.|++.+++..+++|+|+||||++++..||||+||++|+++|.|+|++|+
T Consensus 486 Qrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~ 565 (587)
T 3qf4_A 486 QRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELL 565 (587)
T ss_dssp HHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHH
T ss_conf 99999999972999999979754479999999999999867999899982276889819989999899899978899998
Q ss_pred CCCCHHHHHHHHH
Q ss_conf 0398069999999
Q 000481 1439 ETNSSFSKLVAEY 1451 (1467)
Q Consensus 1439 ~~~~~f~~l~~~~ 1451 (1467)
++++.|++++.+.
T Consensus 566 ~~~~~~~~~~~~~ 578 (587)
T 3qf4_A 566 EHCKPYREIYESQ 578 (587)
T ss_dssp HHCHHHHHHHHHH
T ss_pred HCCCHHHHHHHHH
T ss_conf 6783999999998
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=683.39 Aligned_cols=508 Identities=21% Similarity=0.317 Sum_probs=433.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999989999999999999999999999999999999986145644444560137999720265866100488999999
Q 000481 939 GVYAGVSTASAVFVYFRSFFAAHLGLKASKAFFSGFTNSIFKAPMLFFDSTPVGRILTRLSSDLSILDFDIPFSIVFVAA 1018 (1467)
Q Consensus 939 ~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~~p~~ffd~~p~G~ilnR~s~Di~~id~~l~~~l~~~~~ 1018 (1467)
.++.++.+...++.+.+.+...+.+.+...+++.++++++++.|++||+++++|++++|+++|++.++..+...+..++.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~ 144 (578)
T 4a82_A 65 IALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWL 144 (578)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998789999768986999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCHHHHHH
Q ss_conf 99999999999998869999999999999999999999999999998632242057699997410699987052799999
Q 000481 1019 SGTELLAIIGIMTFVTWQVLVVAIFAMVAVRFVQRYYIATARELIRINGTTKAPVMNYTAETSQGVVTIRAFNMVDRFFQ 1098 (1467)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~y~~~sr~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~ 1098 (1467)
..+.+++.+++++..+|.+.++.+..++++..+..++.+..++..+......++..+++.|+++|+.+||+|++++.+.+
T Consensus 145 ~~~~~i~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~ 224 (578)
T 4a82_A 145 DCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAK 224 (578)
T ss_dssp HHHHHHHHHHHHHHHCTTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 99999999999999969999999999999999999999999999999999999999999999824999998166499999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999878999998988999999999999999-9999998762674368799999999999999999999999999
Q 000481 1099 NYLKLVDIDASLFFHTNGVMEWLILRVEALQNLTLF-TAALFLVLIPRGYVAPGLVGLSLSYAFTLTGTQVFLSRWYCYL 1177 (1467)
Q Consensus 1099 ~~~~~~d~~~~~~~~~~~~~~wl~~rl~~i~~~~~~-~~~~~~~l~~~~~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~l 1177 (1467)
++.+..+...+..........+.......+..+... ...+...++..|.+++|.+..++.|...+..++..+...+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~ 304 (578)
T 4a82_A 225 NFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTL 304 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998599589999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEECEEEEEECCCEEEEECCCCCCHH
Q ss_conf 99766999999843199999987679999998997640899987888579999620000389618959999949999588
Q 000481 1178 ANYIISVERIKQFMHIPPEPPAIVEDKRPPSSWPFKGRIELRQLKIRYRPNAPLVLKGITCTFSEGTRVGVVGRTGSGKT 1257 (1467)
Q Consensus 1178 e~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~isl~I~~GekvgIVGrTGSGKS 1257 (1467)
.....+.+|+.++.+.+++.+. ...+.+.++..|.|+++|++++|+++.+++|+|+||++++||++||||+||||||
T Consensus 305 ~~~~~s~~ri~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKS 381 (578)
T 4a82_A 305 TQSFASMDRVFQLIDEDYDIKN---GVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKS 381 (578)
T ss_dssp HHHHHHHHHHHHHHTCCCSSCC---CTTCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCC---CCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHH
T ss_conf 9999999999999768976667---8776666777880799999997589997413433799879999999899998599
Q ss_pred HHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCCHHHH
Q ss_conf 9999884146798636999795179999788852157862677546655677149999-999999999999838814773
Q 000481 1258 TLISALFRLVEPAGGSILIDGVDICSMGLKDLRVKLSIIPQEPTLFRGSVRTNLDPLG-LYSDDEIWKALEKCQLKTTIS 1336 (1467)
Q Consensus 1258 TL~~~L~rl~~~~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~v~ 1336 (1467)
||+++|.|+++|++|+|.+||.|+++++.+++|++++++||||.+|++|++||+.... ..++++++++++.+++.+++.
T Consensus 382 Tll~~l~g~~~p~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (578)
T 4a82_A 382 TLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIM 461 (578)
T ss_dssp HHHTTTTTSSCCSEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH
T ss_conf 99999846788999679999998442789999600689928983476459999852799988999999998809599997
Q ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCC
Q ss_conf 07787654234688888906999999999860699889995788899999799999999977499379997249100112
Q 000481 1337 SLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVID 1416 (1467)
Q Consensus 1337 ~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTs~lD~~Td~~Iq~~ir~~f~~~TvI~IAHRl~ti~~ 1416 (1467)
.+|+|+||.++|+|.+||||||||++||||++++|+||+||||||++|+++++.+++.+++..+++|+|+||||++++..
T Consensus 462 ~lp~g~~t~~~~~g~~LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~ 541 (578)
T 4a82_A 462 NLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITH 541 (578)
T ss_dssp TSTTGGGCBCCGGGTTSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTT
T ss_pred HCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHC
T ss_conf 57330102530688967999999999999997499999997865457999999999999998089979998317899971
Q ss_pred CCEEEEEECCEEEEECCHHHHHCCCCHHHHHHH
Q ss_conf 498999959889782492378403980699999
Q 000481 1417 SDMVMVLSYGKLLEYDEPSKLMETNSSFSKLVA 1449 (1467)
Q Consensus 1417 ~DrIlVld~G~i~E~g~p~~Ll~~~~~f~~l~~ 1449 (1467)
||||+||++|+++|.|+|++|+++++.|+++++
T Consensus 542 ~d~i~~l~~G~i~~~g~~~el~~~~~~~~~~~~ 574 (578)
T 4a82_A 542 ADKIVVIENGHIVETGTHRELIAKQGAYEHLYS 574 (578)
T ss_dssp CSEEEEEETTEEEEEECHHHHHHTTSHHHHHHT
T ss_pred CCEEEEEECCEEEEECCHHHHHHCCCHHHHHHH
T ss_conf 998999989989998889999858838999998
No 8
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=678.66 Aligned_cols=558 Identities=19% Similarity=0.256 Sum_probs=467.5
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999600348999999999999885333467888630367----66124899-9999998999999999999999
Q 000481 886 WKPFMDYLNVSKGMSLLCLGVLAQSGFVGLQAAATYWLAYAIQIP----KITSGILI-GVYAGVSTASAVFVYFRSFFAA 960 (1467)
Q Consensus 886 ~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~----~~~~~~~l-~iy~~l~~~~~~~~~~~~~~~~ 960 (1467)
++.++.|++...+.. .+.+++.++...+....++++..+.+.- ......++ ..+.++.++..++.+.+.+...
T Consensus 13 ~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (582)
T 3b60_A 13 FRRLWPTIAPFKAGL--IVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCIS 90 (582)
T ss_dssp HHHHHHHHGGGHHHH--HHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999--999999999999999999999999998843686579999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999861456444445601379997202658661004889999999999999999999886999999
Q 000481 961 HLGLKASKAFFSGFTNSIFKAPMLFFDSTPVGRILTRLSSDLSILDFDIPFSIVFVAASGTELLAIIGIMTFVTWQVLVV 1040 (1467)
Q Consensus 961 ~~~~~~s~~l~~~l~~~il~~p~~ffd~~p~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v 1040 (1467)
..+.+....++.++++++++.|++||+++++|++++|+++|++.++..+...+..++..++.+++.+++++..+|.+.++
T Consensus 91 ~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 170 (582)
T 3b60_A 91 WVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSII 170 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999980999997889865899999987999999999999999999999999999999980999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999986322420576999974106999870527999999999999998789999989889
Q 000481 1041 AIFAMVAVRFVQRYYIATARELIRINGTTKAPVMNYTAETSQGVVTIRAFNMVDRFFQNYLKLVDIDASLFFHTNGVMEW 1120 (1467)
Q Consensus 1041 ~i~~~~~~~~~~~~y~~~sr~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1120 (1467)
.+..++++.++..++.+..++..+......+++.+++.|+++|+.+||+|+.++.+.+++.+..+...+..........|
T Consensus 171 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3b60_A 171 LVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSI 250 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999619999983768999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 999999999999999999-9987626743687999999999999999999999999999976699999984319999998
Q 000481 1121 LILRVEALQNLTLFTAAL-FLVLIPRGYVAPGLVGLSLSYAFTLTGTQVFLSRWYCYLANYIISVERIKQFMHIPPEPPA 1199 (1467)
Q Consensus 1121 l~~rl~~i~~~~~~~~~~-~~~l~~~~~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~ 1199 (1467)
.....+++..+....... ...++..|.++.|.+..++.|+..+..++..+...+..+.....+++|+.++.+.+++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 330 (582)
T 3b60_A 251 SDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDE 330 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999984999899999999999999999999999999999999999999999759987667
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEECEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 76799999989976408999878885799996200003896189599999499995889999884146798636999795
Q 000481 1200 IVEDKRPPSSWPFKGRIELRQLKIRYRPNAPLVLKGITCTFSEGTRVGVVGRTGSGKTTLISALFRLVEPAGGSILIDGV 1279 (1467)
Q Consensus 1200 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~isl~I~~GekvgIVGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~ 1279 (1467)
. +.+.++..+.|+++|++++|+++..++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||.
T Consensus 331 ---~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b60_A 331 ---G--KRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGH 405 (582)
T ss_dssp ---C--CBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTE
T ss_pred ---C--CCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCE
T ss_conf ---7--77777888847999889973999974415615997699989998999998999999986106898976979999
Q ss_pred ECCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 179999788852157862677546655677149999--999999999999838814773077876542346888889069
Q 000481 1280 DICSMGLKDLRVKLSIIPQEPTLFRGSVRTNLDPLG--LYSDDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQ 1357 (1467)
Q Consensus 1280 dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~--~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1357 (1467)
|+++++.+++|++++++||||.+|++|+++|+.... ..++++++++++.++++++++++|+|+||.++|+|.+|||||
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq 485 (582)
T 3b60_A 406 DLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQ 485 (582)
T ss_dssp ETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHH
T ss_pred ECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf 82306999999608088068747787899998545999989999999999849799998450411451147988789999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999860699889995788899999799999999977499379997249100112498999959889782492378
Q 000481 1358 RQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKL 1437 (1467)
Q Consensus 1358 rQll~LARALLr~~~ILiLDEaTs~lD~~Td~~Iq~~ir~~f~~~TvI~IAHRl~ti~~~DrIlVld~G~i~E~g~p~~L 1437 (1467)
|||++||||++++|+||+||||||++|+++++.+++.+++..+++|+|+|+||++++..||+|++|++|+++|.|+|++|
T Consensus 486 ~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 565 (582)
T 3b60_A 486 RQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSEL 565 (582)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997289989997865557989999999999999679979999454778985998999978889884589999
Q ss_pred HCCCCHHHHHHHH
Q ss_conf 4039806999999
Q 000481 1438 METNSSFSKLVAE 1450 (1467)
Q Consensus 1438 l~~~~~f~~l~~~ 1450 (1467)
+++++.|+++++.
T Consensus 566 ~~~~~~~~~~~~~ 578 (582)
T 3b60_A 566 LAQHGVYAQLHKM 578 (582)
T ss_dssp HHHTSSHHHHHHH
T ss_pred HHCCCHHHHHHHH
T ss_conf 8769889999997
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=676.29 Aligned_cols=559 Identities=19% Similarity=0.315 Sum_probs=466.9
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999960034899999999999988533346788863036----766124899-9999998999999999999999
Q 000481 886 WKPFMDYLNVSKGMSLLCLGVLAQSGFVGLQAAATYWLAYAIQI----PKITSGILI-GVYAGVSTASAVFVYFRSFFAA 960 (1467)
Q Consensus 886 ~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~----~~~~~~~~l-~iy~~l~~~~~~~~~~~~~~~~ 960 (1467)
++.++.|++...+... +.+++.++...+....++++..+.+. .......++ ..+.++.++..++.+.+.+...
T Consensus 13 ~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (582)
T 3b5x_A 13 FKRLWTYIRLYKAGLV--VSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCLS 90 (582)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999889999999--99999999999999999999999999864686679999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999861456444445601379997202658661004889999999999999999999886999999
Q 000481 961 HLGLKASKAFFSGFTNSIFKAPMLFFDSTPVGRILTRLSSDLSILDFDIPFSIVFVAASGTELLAIIGIMTFVTWQVLVV 1040 (1467)
Q Consensus 961 ~~~~~~s~~l~~~l~~~il~~p~~ffd~~p~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v 1040 (1467)
..+.+....++.++++++++.|++||+++++|++++|+++|++.++..+...+..++..++.+++.++++++.+|.+.++
T Consensus 91 ~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 170 (582)
T 3b5x_A 91 WVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLV 170 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999986999997789878999999988999999999999999999999999999999982999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999986322420576999974106999870527999999999999998789999989889
Q 000481 1041 AIFAMVAVRFVQRYYIATARELIRINGTTKAPVMNYTAETSQGVVTIRAFNMVDRFFQNYLKLVDIDASLFFHTNGVMEW 1120 (1467)
Q Consensus 1041 ~i~~~~~~~~~~~~y~~~sr~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1120 (1467)
.+..++++.++..++.+..++..+......+.+.+++.|+++|+.+||+|+.++.+.+++.+..+...+..........|
T Consensus 171 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3b5x_A 171 LIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSI 250 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999519999970875999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999999999999-99987626743687999999999999999999999999999976699999984319999998
Q 000481 1121 LILRVEALQNLTLFTAA-LFLVLIPRGYVAPGLVGLSLSYAFTLTGTQVFLSRWYCYLANYIISVERIKQFMHIPPEPPA 1199 (1467)
Q Consensus 1121 l~~rl~~i~~~~~~~~~-~~~~l~~~~~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~ 1199 (1467)
.....+++..+...... +...++..|.+++|.+...+.|...+..++..+...+..+.....+.+|+.++.+.+++.+.
T Consensus 251 ~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 330 (582)
T 3b5x_A 251 ADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDN 330 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999985998899999999999999999999999999999999999999999758976777
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEECEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 76799999989976408999878885799996200003896189599999499995889999884146798636999795
Q 000481 1200 IVEDKRPPSSWPFKGRIELRQLKIRYRPNAPLVLKGITCTFSEGTRVGVVGRTGSGKTTLISALFRLVEPAGGSILIDGV 1279 (1467)
Q Consensus 1200 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~isl~I~~GekvgIVGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~ 1279 (1467)
.. .+.++..|.|+++|++++|+++..++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||.
T Consensus 331 ---~~--~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b5x_A 331 ---GK--YEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGH 405 (582)
T ss_pred ---CC--CCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf ---77--7777788828999989972899865400416998799989998999997999999996577899987989999
Q ss_pred ECCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 179999788852157862677546655677149999--999999999999838814773077876542346888889069
Q 000481 1280 DICSMGLKDLRVKLSIIPQEPTLFRGSVRTNLDPLG--LYSDDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQ 1357 (1467)
Q Consensus 1280 dI~~i~l~~LR~~isiIpQdp~LF~gTIR~NLdp~~--~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1357 (1467)
|+++++.+++|++++++||||.+|++|+++|+.... ..++++++++++.++++++++.+|+|+||.++++|.+|||||
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq 485 (582)
T 3b5x_A 406 DVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQ 485 (582)
T ss_pred EHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHH
T ss_conf 85638899996485898279905310299998566889999999999999879899998476533451068888479999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999860699889995788899999799999999977499379997249100112498999959889782492378
Q 000481 1358 RQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKL 1437 (1467)
Q Consensus 1358 rQll~LARALLr~~~ILiLDEaTs~lD~~Td~~Iq~~ir~~f~~~TvI~IAHRl~ti~~~DrIlVld~G~i~E~g~p~~L 1437 (1467)
|||++||||++++|+||+||||||++|+++++.+++.|++..+++|+|+|+||++++..||+|++|++|+++|.|+|++|
T Consensus 486 ~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 565 (582)
T 3b5x_A 486 RQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADL 565 (582)
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997499999997854468999999999999997289989999368899981998999989989997789999
Q ss_pred HCCCCHHHHHHHHH
Q ss_conf 40398069999999
Q 000481 1438 METNSSFSKLVAEY 1451 (1467)
Q Consensus 1438 l~~~~~f~~l~~~~ 1451 (1467)
+++++.|+++++..
T Consensus 566 ~~~~~~~~~~~~~q 579 (582)
T 3b5x_A 566 LAQDGAYAQLHRIQ 579 (582)
T ss_pred HHCCCHHHHHHHHH
T ss_conf 84885899999986
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=668.33 Aligned_cols=538 Identities=24% Similarity=0.327 Sum_probs=446.9
Q ss_pred HHHHHHHHHHHHHHHHCCC----CC--C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9988533346788863036----76--6--12489999999989999999999999999999999999999999986145
Q 000481 911 GFVGLQAAATYWLAYAIQI----PK--I--TSGILIGVYAGVSTASAVFVYFRSFFAAHLGLKASKAFFSGFTNSIFKAP 982 (1467)
Q Consensus 911 ~~~~~~~~~~~wl~~~~~~----~~--~--~~~~~l~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~~p 982 (1467)
+........++++....+. .. . ....+..+++++.+...++.+.+.+.....+.+...+++.++++++++.|
T Consensus 30 ~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~ 109 (595)
T 2yl4_A 30 MSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQRIVNRLRTSLFSSILRQE 109 (595)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999735740266799999999999999999999999999999999999999999999998199
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 64444456013799972026586610048899999999999999999998869999999999999999999999999999
Q 000481 983 MLFFDSTPVGRILTRLSSDLSILDFDIPFSIVFVAASGTELLAIIGIMTFVTWQVLVVAIFAMVAVRFVQRYYIATAREL 1062 (1467)
Q Consensus 983 ~~ffd~~p~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~y~~~sr~l 1062 (1467)
++||+.+++|++++|+++|++.++..+...+..++..++.+++.++++++.+|.+.++++..+++...+...+.+..+..
T Consensus 110 ~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~ 189 (595)
T 2yl4_A 110 VAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFVLSVVPPVSIIAVIYGRYLRKL 189 (595)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99977798488999999999999999999999999999999999999999819999999999999999999999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q ss_conf 99863224205769999741069998705279999999999999987899999898899999999999999999-99998
Q 000481 1063 IRINGTTKAPVMNYTAETSQGVVTIRAFNMVDRFFQNYLKLVDIDASLFFHTNGVMEWLILRVEALQNLTLFTA-ALFLV 1141 (1467)
Q Consensus 1063 ~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~i~~~~~~~~-~~~~~ 1141 (1467)
.+......+.+.+++.|+++|+.+||+|+.++++.+++.+..+...+..........|......++..+..... .+...
T Consensus 190 ~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 269 (595)
T 2yl4_A 190 TKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFFGATGLSGNLIVLSVLYKGGL 269 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999981199999837569999999999999999999999999999999999999999999999999
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCE-EEEEE
Q ss_conf 76267436879999999999999999999999999999766999999843199999987679999998997640-89998
Q 000481 1142 LIPRGYVAPGLVGLSLSYAFTLTGTQVFLSRWYCYLANYIISVERIKQFMHIPPEPPAIVEDKRPPSSWPFKGR-IELRQ 1220 (1467)
Q Consensus 1142 l~~~~~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~-I~f~n 1220 (1467)
++..|.+++|.+..++.|+..+..++..+...+..+.....+++|+.++.+.+++.+.. ...++ ..+..|. |+++|
T Consensus 270 ~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~--~~~~~-~~~~~~~~i~~~~ 346 (595)
T 2yl4_A 270 LMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLPFN--EGVIL-NEKSFQGALEFKN 346 (595)
T ss_dssp HHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSCSS--CSBCC-CTTTCCCCEEEEE
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCC-CCCCCCCEEEEEE
T ss_conf 99869978999999999999999999999999999999999999999998389766777--78777-7678998389998
Q ss_pred EEEEECCC-CCCCEECEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEECCC
Q ss_conf 78885799-99620000389618959999949999588999988414679863699979517999978885215786267
Q 000481 1221 LKIRYRPN-APLVLKGITCTFSEGTRVGVVGRTGSGKTTLISALFRLVEPAGGSILIDGVDICSMGLKDLRVKLSIIPQE 1299 (1467)
Q Consensus 1221 vs~~Y~~~-~~~vLk~isl~I~~GekvgIVGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~dI~~i~l~~LR~~isiIpQd 1299 (1467)
|+++|+.+ ..++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||.|+++++.+++|++++++|||
T Consensus 347 v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~Q~ 426 (595)
T 2yl4_A 347 VHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQE 426 (595)
T ss_dssp EEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEETTEETTTBCHHHHHHSEEEECSS
T ss_pred EEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHCEEEECCC
T ss_conf 89985899888120112799849988999899999799999998258578983799999981117999997322898368
Q ss_pred CCCCCCCHHHHCCCCC----CCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 7546655677149999----999999999999838814773077876542346888889069999999998606998899
Q 000481 1300 PTLFRGSVRTNLDPLG----LYSDDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILV 1375 (1467)
Q Consensus 1300 p~LF~gTIR~NLdp~~----~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILi 1375 (1467)
|.+|++|+++|+.... ..++++++++++.+++.++++++|+|+|+.++|+|.+||||||||++||||++++|+||+
T Consensus 427 ~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~LSgGq~qrv~iAral~~~p~ill 506 (595)
T 2yl4_A 427 PILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILL 506 (595)
T ss_dssp CCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCCCCHHHHHHHHHHHHHHHCCSEEE
T ss_pred CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 83268779999840587766568999999999869799997473201350168878689999999999999975999999
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCEEEEEECCEEEEECCHHHHHC-CCCHHHHHHHHH
Q ss_conf 9578889999979999999997749937999724910011249899995988978249237840-398069999999
Q 000481 1376 LDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLME-TNSSFSKLVAEY 1451 (1467)
Q Consensus 1376 LDEaTs~lD~~Td~~Iq~~ir~~f~~~TvI~IAHRl~ti~~~DrIlVld~G~i~E~g~p~~Ll~-~~~~f~~l~~~~ 1451 (1467)
||||||++|+++++.+++.+++..+++|+|+|+||++++..||+|++|++|+++|.|+|++|++ +++.|+++++..
T Consensus 507 lDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~q 583 (595)
T 2yl4_A 507 LDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEELLSKPNGIYRKLMNKQ 583 (595)
T ss_dssp EECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEECSCC------C---------
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHH
T ss_conf 98866689989999999999999659979999468789975998999989989997889999747872999999974
Done!