BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000484
(1464 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/1018 (40%), Positives = 579/1018 (56%), Gaps = 64/1018 (6%)
Query: 1 MTKLSYLHEPGVLHNLAARY-ELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQF 59
+T LSYLHEP VLHNL R+ + IYTY G +L+AINP+++LP +Y ++ Y G
Sbjct: 74 LTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINAYSGQNM 132
Query: 60 GELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGR 119
G++ PH+FA+A+ AY+ M + ++ SI+VSGESGAGKT + K MRY A + G S E
Sbjct: 133 GDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSG-SASEA- 190
Query: 120 TVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
VE++VL SNP++E+ GNAKT RN+NSSRFGK++E+ FDK RI GA +RTYLLE+SRV
Sbjct: 191 NVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVV 250
Query: 180 QISDPERNYHCFYLLCA--APPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATR 237
++ ERNYH FY LCA A PE + +LG+ FHY Q +DG+DD +E + TR
Sbjct: 251 FQAEEERNYHIFYQLCASAALPEFK-TLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTR 309
Query: 238 RAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKC 297
+A ++GIS+ Q IFR++A ILHLGN+EFA ++DS I + L +L+
Sbjct: 310 QACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPPKHD--PLTIFCDLMGV 366
Query: 298 DAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQD 357
D + + L +R + T E + + + A+ +RDALAK +Y+ LF+W+VD +N ++
Sbjct: 367 DYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHST 426
Query: 358 PNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSY 417
+ IGVLDIYGFE+F++NSFEQFCIN+ NEKLQQ FN HVFK+EQEEY KE+I W+
Sbjct: 427 VKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTL 486
Query: 418 IEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT-FKSNKRFIKPKLSR 476
I+F DNQ ++LIE K G++ LLDE C PK + +T+AQKLY T F KP+LS
Sbjct: 487 IDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSN 545
Query: 477 TSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASK-------------------CP 517
+F I H+A +V Y + FL+KNKD V E +L +SK
Sbjct: 546 KAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSA 605
Query: 518 FVSGXX---------XXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPN 568
SG +G +F+ L LMETLN+T PHY+RC+KPN
Sbjct: 606 TPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPN 665
Query: 569 NALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLA--PDVLDGNY 626
+ P F+ +QQLR GVLE IRIS AG+P+R T+ EF R+ VL DVL
Sbjct: 666 DFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLS--- 722
Query: 627 DDKVACEKILDKMGL--KGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYI 684
D K C+ +L+K+ L YQ GKTK+F RAGQ+A L+ RA+ L A IQ+ IR ++
Sbjct: 723 DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWL 782
Query: 685 ARKEFIALRKAAIVLQSYWRGILACKLYEQLRREAAALKIQKNFHSYTARTSYLTARSSA 744
RK+++ +R+AAI +Q Y RG A LRR AA+ IQK Y R Y R +
Sbjct: 783 MRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDAT 842
Query: 745 IQLQTGLRAMVARNEFRFRKQTKAAIIIEAYLRRHTACSYYKSLKKAAVITQCGWXXXXX 804
I LQ LR + RN+++ + +III+ ++R A +Y KA V QC +
Sbjct: 843 IALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMA 902
Query: 805 XXXXXNLKMAARETGALKEAKDKLEKRVEELTWRL-----QFEKQLR--TNLEEEKAQEI 857
LK+ AR K+ LE ++ +L ++ +++ L NLE + E
Sbjct: 903 KRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTET 962
Query: 858 AKLQDALQAMQLQVEE---ANFRILKEQEAARKAIEEAPPIVKETPVIVHDTEK----IE 910
KL+ ++ +++ EE A R+L QE K +E E I +K E
Sbjct: 963 EKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETE 1022
Query: 911 SLTAEVDSLKALLLSERQSAEEARKACMDAEVRNTELVKKLEDTEEKVGQLQESMQRL 968
L +E+ LL +E+ EE + D TE ++K E K +L + +RL
Sbjct: 1023 QLVSELKEQNTLLKTEK---EELNRRIHDQAKEITETMEKKLVEETKQLELDLNDERL 1077
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 629 bits (1621), Expect = e-180, Method: Compositional matrix adjust.
Identities = 318/674 (47%), Positives = 461/674 (68%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 91 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 150 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 209
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 210 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 269
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 270 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 329
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 330 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 385
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 445
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDIYGFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 446 KA-YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 504
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 505 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 564
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 565 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 624
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 625 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 685 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 744
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 745 FFRAGQLARIEEAR 758
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 627 bits (1617), Expect = e-179, Method: Compositional matrix adjust.
Identities = 317/674 (47%), Positives = 461/674 (68%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 91 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 150 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 209
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 210 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 269
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 270 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 329
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 330 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 385
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 445
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDIYGFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 446 KA-YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 504
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 505 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 564
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 565 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 624
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 625 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + ++ G TK+
Sbjct: 685 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKI 744
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 745 FFRAGQLARIEEAR 758
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 626 bits (1614), Expect = e-179, Method: Compositional matrix adjust.
Identities = 317/676 (46%), Positives = 461/676 (68%), Gaps = 15/676 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 102 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 160
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 161 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 220
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 221 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 280
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 281 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 340
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 341 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 396
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 397 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 456
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 457 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 515
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 516 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 575
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 576 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 635
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 636 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 695
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 696 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 755
Query: 652 FLRAGQMAELDARRAE 667
F RAGQ+A ++ R +
Sbjct: 756 FFRAGQLARIEEAREQ 771
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 626 bits (1614), Expect = e-179, Method: Compositional matrix adjust.
Identities = 317/676 (46%), Positives = 461/676 (68%), Gaps = 15/676 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 102 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 160
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 161 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 220
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 221 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 280
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 281 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 340
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 341 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 396
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 397 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 456
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 457 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 515
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 516 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 575
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 576 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 635
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 636 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 695
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 696 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 755
Query: 652 FLRAGQMAELDARRAE 667
F RAGQ+A ++ R +
Sbjct: 756 FFRAGQLARIEEAREQ 771
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 625 bits (1613), Expect = e-179, Method: Compositional matrix adjust.
Identities = 317/674 (47%), Positives = 460/674 (68%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 91 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 150 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 209
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 210 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVV 269
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 270 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 329
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 330 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 385
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 445
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 446 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 504
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 505 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 564
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 565 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 624
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 625 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 685 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 744
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 745 FFRAGQLARIEEAR 758
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 625 bits (1613), Expect = e-179, Method: Compositional matrix adjust.
Identities = 318/678 (46%), Positives = 462/678 (68%), Gaps = 15/678 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 90 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 148
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 149 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 208
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 209 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 268
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 269 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 328
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 329 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 384
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 385 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 444
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 445 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 503
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 504 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 563
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 564 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 623
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 624 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 683
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 684 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 743
Query: 652 FLRAGQMAELDARRAEVL 669
F RAGQ+A ++ R + L
Sbjct: 744 FFRAGQLARIEEAREQRL 761
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 625 bits (1612), Expect = e-179, Method: Compositional matrix adjust.
Identities = 318/678 (46%), Positives = 462/678 (68%), Gaps = 15/678 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 102 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 160
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 161 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 220
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 221 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 280
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 281 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 340
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 341 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 396
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 397 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 456
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 457 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 515
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 516 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 575
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 576 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 635
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 636 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 695
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 696 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 755
Query: 652 FLRAGQMAELDARRAEVL 669
F RAGQ+A ++ R + L
Sbjct: 756 FFRAGQLARIEEAREQRL 773
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 625 bits (1612), Expect = e-179, Method: Compositional matrix adjust.
Identities = 318/678 (46%), Positives = 462/678 (68%), Gaps = 15/678 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 102 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 160
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 161 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 220
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 221 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 280
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 281 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 340
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 341 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 396
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 397 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 456
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 457 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 515
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 516 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 575
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 576 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 635
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 636 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 695
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 696 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 755
Query: 652 FLRAGQMAELDARRAEVL 669
F RAGQ+A ++ R + L
Sbjct: 756 FFRAGQLARIEEAREQRL 773
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 625 bits (1611), Expect = e-179, Method: Compositional matrix adjust.
Identities = 316/680 (46%), Positives = 461/680 (67%), Gaps = 15/680 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 91 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 150 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 209
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSS FGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 210 VLEQQILQANPILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEKSRVV 269
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D +E+ TR+
Sbjct: 270 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQ 329
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 330 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 385
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + +
Sbjct: 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSER 445
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 446 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFI 504
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 505 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 564
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 565 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 624
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 625 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 685 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 744
Query: 652 FLRAGQMAELDARRAEVLGN 671
F RAGQ+A ++ R + LG+
Sbjct: 745 FFRAGQLARIEEAREQRLGS 764
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 625 bits (1611), Expect = e-179, Method: Compositional matrix adjust.
Identities = 317/674 (47%), Positives = 460/674 (68%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 91 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 150 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 209
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 210 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVV 269
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 270 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 329
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 330 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 385
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 445
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 446 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFI 504
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 505 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 564
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 565 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 624
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 625 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 685 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 744
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 745 FFRAGQLARIEEAR 758
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 625 bits (1611), Expect = e-179, Method: Compositional matrix adjust.
Identities = 317/674 (47%), Positives = 460/674 (68%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 91 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 150 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 209
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 210 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 269
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 270 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 329
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 330 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 385
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 445
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 446 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 504
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 505 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 564
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 565 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 624
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 625 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 685 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 744
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 745 FFRAGQLARIEEAR 758
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 624 bits (1610), Expect = e-179, Method: Compositional matrix adjust.
Identities = 317/674 (47%), Positives = 460/674 (68%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 91 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 150 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 209
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 210 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 269
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 270 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 329
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 330 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 385
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 445
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 446 KA-YFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 504
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 505 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 564
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 565 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 624
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 625 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 685 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 744
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 745 FFRAGQLARIEEAR 758
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 624 bits (1608), Expect = e-178, Method: Compositional matrix adjust.
Identities = 316/674 (46%), Positives = 460/674 (68%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 91 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 150 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 209
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 210 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVV 269
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 270 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 329
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 330 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 385
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 445
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 446 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 504
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 505 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 564
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 565 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 624
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 625 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + ++ G TK+
Sbjct: 685 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKI 744
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 745 FFRAGQLARIEEAR 758
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 624 bits (1608), Expect = e-178, Method: Compositional matrix adjust.
Identities = 316/674 (46%), Positives = 460/674 (68%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 91 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 150 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 209
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNN+SRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 210 VLEQQILQANPILEAFGNAKTTRNNNASRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 269
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 270 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 329
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 330 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 385
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 445
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 446 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 504
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 505 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 564
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 565 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 624
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 625 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 685 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 744
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 745 FFRAGQLARIEEAR 758
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 623 bits (1607), Expect = e-178, Method: Compositional matrix adjust.
Identities = 316/674 (46%), Positives = 459/674 (68%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 90 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 148
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 149 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 208
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 209 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 268
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 269 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 328
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 329 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 384
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 385 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 444
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 445 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 503
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 504 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 563
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 564 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 623
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC VLE
Sbjct: 624 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNAVLEG 683
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 684 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 743
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 744 FFRAGQLARIEEAR 757
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 622 bits (1604), Expect = e-178, Method: Compositional matrix adjust.
Identities = 316/674 (46%), Positives = 459/674 (68%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 90 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 148
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 149 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 208
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 209 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 268
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 269 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 328
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 329 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 384
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 385 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 444
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 445 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 503
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 504 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 563
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 564 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 623
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC VLE
Sbjct: 624 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNVVLEG 683
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 684 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 743
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 744 FFRAGQLARIEEAR 757
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 622 bits (1603), Expect = e-178, Method: Compositional matrix adjust.
Identities = 315/674 (46%), Positives = 460/674 (68%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 91 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 150 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 209
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 210 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 269
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 270 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 329
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 330 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 385
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + ++
Sbjct: 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCEER 445
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 446 KA-YFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 504
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 505 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 564
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 565 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 624
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 625 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + ++ G TK+
Sbjct: 685 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKI 744
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 745 FFRAGQLARIEEAR 758
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 621 bits (1601), Expect = e-177, Method: Compositional matrix adjust.
Identities = 317/678 (46%), Positives = 461/678 (67%), Gaps = 15/678 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ +P +Y M++ +KG +
Sbjct: 90 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKIIP-IYTQEMVDIFKGRRRN 148
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 149 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 208
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 209 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 268
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 269 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 328
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 329 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 384
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 385 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLCQER 444
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 445 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 503
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 504 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 563
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 564 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 623
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 624 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 683
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 684 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 743
Query: 652 FLRAGQMAELDARRAEVL 669
F RAGQ+A ++ R + L
Sbjct: 744 FFRAGQLARIEEAREQRL 761
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 620 bits (1599), Expect = e-177, Method: Compositional matrix adjust.
Identities = 315/674 (46%), Positives = 458/674 (67%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 91 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 150 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 209
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 210 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVV 269
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D +E+ TR+
Sbjct: 270 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQ 329
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 330 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 385
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + +
Sbjct: 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSE- 444
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 445 RAAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFI 504
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 505 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 564
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 565 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 624
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 625 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G TK+
Sbjct: 685 IRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKI 744
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 745 FFRAGQLARIEEAR 758
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 617 bits (1592), Expect = e-176, Method: Compositional matrix adjust.
Identities = 314/674 (46%), Positives = 457/674 (67%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 91 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 150 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 209
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 210 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVV 269
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D +E+ TR+
Sbjct: 270 FQSTTERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQ 329
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 330 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 385
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + +
Sbjct: 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSER 445
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 446 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFI 504
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 505 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 564
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSG--XXXXXXXXXXXX 533
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 565 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 624
Query: 534 XXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
+ +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLEA
Sbjct: 625 ANFLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEA 684
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ LAP+V D + A + +L + + + ++ G TK+
Sbjct: 685 IRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKI 744
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 745 FFRAGQLARIEEAR 758
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 617 bits (1591), Expect = e-176, Method: Compositional matrix adjust.
Identities = 315/674 (46%), Positives = 456/674 (67%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 91 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 150 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 209
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 210 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVV 269
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D EE+ TR+
Sbjct: 270 FQSTTERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEEEFKITRQ 329
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 330 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 385
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + +
Sbjct: 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSER 445
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 446 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFI 504
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 505 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 564
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 565 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 624
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 625 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ LAP+V D + A + +L + + + ++ G TK+
Sbjct: 685 IRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKI 744
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 745 FFRAGQLARIEEAR 758
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 613 bits (1582), Expect = e-175, Method: Compositional matrix adjust.
Identities = 312/674 (46%), Positives = 456/674 (67%), Gaps = 15/674 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 91 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 150 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 209
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 210 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVV 269
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D +E+ TR+
Sbjct: 270 FQSTSERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQ 329
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 330 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 385
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + +
Sbjct: 386 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSER 445
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQE+Y KE+INW++I
Sbjct: 446 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEKYLKEKINWTFI 504
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 505 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 564
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSG--XXXXXXXXXXXX 533
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 565 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 624
Query: 534 XXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
+ +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 625 ANFLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684
Query: 594 IRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKV 651
IRI+ G+P R + +F+ R+ LAP+V D + A + +L + + + ++ G TK+
Sbjct: 685 IRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKI 744
Query: 652 FLRAGQMAELDARR 665
F RAGQ+A ++ R
Sbjct: 745 FFRAGQLARIEEAR 758
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 609 bits (1571), Expect = e-174, Method: Compositional matrix adjust.
Identities = 328/731 (44%), Positives = 452/731 (61%), Gaps = 47/731 (6%)
Query: 1 MTKLSYLHEPGVLHNLAARY-ELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQF 59
+T LSYLHEP VLHNL R+ + IYTY G +L+AINP+++LP +Y ++ Y G
Sbjct: 74 LTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINAYSGQNM 132
Query: 60 GELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGR 119
G++ PH+FA+A+ AY+ M + ++ SI+VSGESGAGKT + K MRY A + G S E
Sbjct: 133 GDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSG-SASEA- 190
Query: 120 TVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
VE++VL SNP++E+ GNAKT RN+NSSRFGK++E+ FDK RI GA +RTYLLE+SRV
Sbjct: 191 NVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVV 250
Query: 180 QISDPERNYHCFYLLCA--APPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATR 237
++ ERNYH FY LCA A PE + +LG+ FHY Q +DG+DD +E + TR
Sbjct: 251 FQAEEERNYHIFYQLCASAALPEFK-TLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTR 309
Query: 238 RAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKC 297
+A ++GIS+ Q IFR++A ILHLGN+EFA ++DS I + L +L+
Sbjct: 310 QACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPPKHDP--LTIFCDLMGV 366
Query: 298 DAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQD 357
D + + L +R + T E + + + A+ +RDALAK +Y+ LF+W+VD +N ++
Sbjct: 367 DYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHST 426
Query: 358 PNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSY 417
+ IGVLDIYGFE+F++NSFEQFCIN+ NEKLQQ FN HVFK+EQEEY KE+I W+
Sbjct: 427 VKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTL 486
Query: 418 IEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT-FKSNKRFIKPKLSR 476
I+F DNQ ++LIE K G++ LLDE C PK + +T+AQKLY T F KP+LS
Sbjct: 487 IDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSN 545
Query: 477 TSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASK--------------------- 515
+F I H+A +V Y + FL+KNKD V E +L +SK
Sbjct: 546 KAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSA 605
Query: 516 -----CPF--VSGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPN 568
P +G +F+ L LMETLN+T PHY+RC+KPN
Sbjct: 606 TPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPN 665
Query: 569 NALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLA--PDVLDGNY 626
+ P F+ +QQLR GVLE IRIS AG+P+R T+ EF R+ VL DVL
Sbjct: 666 DFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLS--- 722
Query: 627 DDKVACEKILDKMGL--KGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYI 684
D K C+ +L+K+ L YQ GKTK+F RAGQ+A L+ RA+ L A IQ+ IR ++
Sbjct: 723 DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWL 782
Query: 685 ARKEFIALRKA 695
RK+++ +R+
Sbjct: 783 MRKKYMRMRRG 793
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 593 bits (1529), Expect = e-169, Method: Compositional matrix adjust.
Identities = 319/703 (45%), Positives = 435/703 (61%), Gaps = 47/703 (6%)
Query: 1 MTKLSYLHEPGVLHNLAARY-ELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQF 59
+T LSYLHEP VLHNL R+ + IYTY G +L+AINP+++LP +Y ++ Y G
Sbjct: 74 LTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINAYSGQNM 132
Query: 60 GELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGR 119
G++ PH+FA+A+ AY+ M + ++ SI+VSGESGAGKT + K MRY A + G S E
Sbjct: 133 GDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSG-SASEA- 190
Query: 120 TVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
VE++VL SNP++E+ GNAKT RN+NSSRFGK++E+ FDK RI GA +RTYLLE+SRV
Sbjct: 191 NVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVV 250
Query: 180 QISDPERNYHCFYLLCA--APPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATR 237
++ ERNYH FY LCA A PE + +LG+ FHY Q +DG+DD +E + TR
Sbjct: 251 FQAEEERNYHIFYQLCASAALPEFK-TLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTR 309
Query: 238 RAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKC 297
+A ++GIS+ Q IFR++A ILHLGN+EFA ++DS I + L +L+
Sbjct: 310 QACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPPKHDP--LTIFCDLMGV 366
Query: 298 DAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQD 357
D + + L +R + T E + + + A+ +RDALAK +Y+ LF+W+VD +N ++
Sbjct: 367 DYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHST 426
Query: 358 PNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSY 417
+ IGVLDIYGFE+F++NSFEQFCIN+ NEKLQQ FN HVFK+EQEEY KE+I W+
Sbjct: 427 VKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTL 486
Query: 418 IEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT-FKSNKRFIKPKLSR 476
I+F DNQ ++LIE K G++ LLDE C PK + +T+AQKLY T F KP+LS
Sbjct: 487 IDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSN 545
Query: 477 TSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASK--------------------- 515
+F I H+A +V Y + FL+KNKD V E +L +SK
Sbjct: 546 KAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSA 605
Query: 516 -----CPF--VSGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPN 568
P +G +F+ L LMETLN+T PHY+RC+KPN
Sbjct: 606 TPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPN 665
Query: 569 NALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLA--PDVLDGNY 626
+ P F+ +QQLR GVLE IRIS AG+P+R T+ EF R+ VL DVL
Sbjct: 666 DFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLS--- 722
Query: 627 DDKVACEKILDKMGL--KGYQIGKTKVFLRAGQMAELDARRAE 667
D K C+ +L+K+ L YQ GKTK+F RAGQ+A L+ RA+
Sbjct: 723 DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRAD 765
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 592 bits (1525), Expect = e-169, Method: Compositional matrix adjust.
Identities = 297/609 (48%), Positives = 423/609 (69%), Gaps = 13/609 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG +
Sbjct: 90 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRN 148
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 149 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 208
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 209 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 268
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 269 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 328
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 329 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 384
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 385 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER 444
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDIYGFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 445 KA-YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 503
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 504 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 563
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 564 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 623
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 624 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 683
Query: 594 IRISCAGYP 602
IRI+ G+P
Sbjct: 684 IRITRKGFP 692
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 585 bits (1509), Expect = e-167, Method: Compositional matrix adjust.
Identities = 296/611 (48%), Positives = 422/611 (69%), Gaps = 13/611 (2%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ +P +Y M++ +KG +
Sbjct: 90 MSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKIIP-IYTQEMVDIFKGRRRN 148
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G
Sbjct: 149 EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSG 208
Query: 121 V-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+SRV
Sbjct: 209 VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVV 268
Query: 180 QISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+ TR+
Sbjct: 269 FQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQ 328
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + + +
Sbjct: 329 AMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTVFGVN 384
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ + Q+
Sbjct: 385 PSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLCQER 444
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+INW++I
Sbjct: 445 KA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFI 503
Query: 419 EF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLS 475
+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +P+ S
Sbjct: 504 DFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFS 563
Query: 476 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXX 535
+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 564 KTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKG 623
Query: 536 XXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEA 593
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC GVLE
Sbjct: 624 ANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 683
Query: 594 IRISCAGYPTR 604
IRI+ G+P R
Sbjct: 684 IRITRKGFPNR 694
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 526 bits (1356), Expect = e-149, Method: Compositional matrix adjust.
Identities = 301/740 (40%), Positives = 434/740 (58%), Gaps = 46/740 (6%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M ++YL+E VL+NL +RY IYTY+G IA+NP++RLP +Y ++ +Y+G +
Sbjct: 88 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 146
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG--------- 111
E+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 147 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 206
Query: 112 GRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 171
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA + TY
Sbjct: 207 ASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETY 265
Query: 172 LLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLGDPKS--FHYLNQSNCYALDGVD 228
LLE+SRV ERNYH FY +C+ A PE+ + L P S + ++NQ C +D +D
Sbjct: 266 LLEKSRVTYQQSAERNYHIFYQICSNAIPELND-VMLVTPDSGLYSFINQG-CLTVDNID 323
Query: 229 DTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEF---AKGEEADS-SVIKDEKS 284
D EE+ A DI+G ++EE+ ++F+ A+ILH+G ++F + E+A+S + EK
Sbjct: 324 DVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKV 383
Query: 285 RFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFD 344
F L +A L AL+ + E++T+ + V S ALAK++Y R+F+
Sbjct: 384 AF-------LCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFN 436
Query: 345 WLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKME 404
WLV ++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +E
Sbjct: 437 WLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILE 496
Query: 405 QEEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT- 462
QEEY KE I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 497 QEEYKKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNH 555
Query: 463 FKSNKRFIKP-KLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKC 516
N+ F KP K +R + F + HYAG V Y +L+KNKD + LL ASK
Sbjct: 556 MGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKE 615
Query: 517 PFVSGXXXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNSTEPHYIRCVKPNN 569
P V+ S F+ L LM+ L ST PH++RC+ PN
Sbjct: 616 PLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNE 675
Query: 570 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNYDD 628
+P + + ++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G D
Sbjct: 676 LKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDG 735
Query: 629 KVACEKILD--KMGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIAR 686
K EKIL +M Y++G TKVF +AG + L+ R E L + Q IR Y+ R
Sbjct: 736 KTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIR 795
Query: 687 KEFIALRKAAIVLQSYWRGI 706
K + L+ I L R I
Sbjct: 796 KAYKKLQDQRIGLSVIQRNI 815
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 526 bits (1355), Expect = e-149, Method: Compositional matrix adjust.
Identities = 301/740 (40%), Positives = 434/740 (58%), Gaps = 46/740 (6%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M ++YL+E VL+NL +RY IYTY+G IA+NP++RLP +Y ++ +Y+G +
Sbjct: 88 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 146
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG--------- 111
E+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 147 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 206
Query: 112 GRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 171
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA + TY
Sbjct: 207 ASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETY 265
Query: 172 LLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLGDPKS--FHYLNQSNCYALDGVD 228
LLE+SRV ERNYH FY +C+ A PE+ + L P S + ++NQ C +D +D
Sbjct: 266 LLEKSRVTYQQSAERNYHIFYQICSNAIPELND-VMLVTPDSGLYSFINQG-CLTVDNID 323
Query: 229 DTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEF---AKGEEADS-SVIKDEKS 284
D EE+ A DI+G ++EE+ ++F+ A+ILH+G ++F + E+A+S + EK
Sbjct: 324 DVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKV 383
Query: 285 RFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFD 344
F L +A L AL+ + E++T+ + V S ALAK++Y R+F+
Sbjct: 384 AF-------LCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFN 436
Query: 345 WLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKME 404
WLV ++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +E
Sbjct: 437 WLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILE 496
Query: 405 QEEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT- 462
QEEY KE I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 497 QEEYKKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNH 555
Query: 463 FKSNKRFIKP-KLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKC 516
N+ F KP K +R + F + HYAG V Y +L+KNKD + LL ASK
Sbjct: 556 MGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKE 615
Query: 517 PFVSGXXXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNSTEPHYIRCVKPNN 569
P V+ S F+ L LM+ L ST PH++RC+ PN
Sbjct: 616 PLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNE 675
Query: 570 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNYDD 628
+P + + ++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G D
Sbjct: 676 LKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDG 735
Query: 629 KVACEKILD--KMGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIAR 686
K EKIL +M Y++G TKVF +AG + L+ R E L + Q IR Y+ R
Sbjct: 736 KTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIR 795
Query: 687 KEFIALRKAAIVLQSYWRGI 706
K + L+ I L R I
Sbjct: 796 KAYKKLQDQRIGLSVIQRNI 815
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 526 bits (1355), Expect = e-149, Method: Compositional matrix adjust.
Identities = 301/740 (40%), Positives = 434/740 (58%), Gaps = 46/740 (6%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M ++YL+E VL+NL +RY IYTY+G IA+NP++RLP +Y ++ +Y+G +
Sbjct: 84 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 142
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG--------- 111
E+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 143 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 202
Query: 112 GRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 171
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA + TY
Sbjct: 203 ASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETY 261
Query: 172 LLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLGDPKS--FHYLNQSNCYALDGVD 228
LLE+SRV ERNYH FY +C+ A PE+ + L P S + ++NQ C +D +D
Sbjct: 262 LLEKSRVTYQQSAERNYHIFYQICSNAIPELND-VMLVTPDSGLYSFINQG-CLTVDNID 319
Query: 229 DTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEF---AKGEEADS-SVIKDEKS 284
D EE+ A DI+G ++EE+ ++F+ A+ILH+G ++F + E+A+S + EK
Sbjct: 320 DVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKV 379
Query: 285 RFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFD 344
F L +A L AL+ + E++T+ + V S ALAK++Y R+F+
Sbjct: 380 AF-------LCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFN 432
Query: 345 WLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKME 404
WLV ++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +E
Sbjct: 433 WLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILE 492
Query: 405 QEEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT- 462
QEEY KE I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 493 QEEYKKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNH 551
Query: 463 FKSNKRFIKP-KLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKC 516
N+ F KP K +R + F + HYAG V Y +L+KNKD + LL ASK
Sbjct: 552 MGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKE 611
Query: 517 PFVSGXXXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNSTEPHYIRCVKPNN 569
P V+ S F+ L LM+ L ST PH++RC+ PN
Sbjct: 612 PLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNE 671
Query: 570 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNYDD 628
+P + + ++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G D
Sbjct: 672 LKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDG 731
Query: 629 KVACEKILD--KMGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIAR 686
K EKIL +M Y++G TKVF +AG + L+ R E L + Q IR Y+ R
Sbjct: 732 KTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIR 791
Query: 687 KEFIALRKAAIVLQSYWRGI 706
K + L+ I L R I
Sbjct: 792 KAYKKLQDQRIGLSVIQRNI 811
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 526 bits (1355), Expect = e-149, Method: Compositional matrix adjust.
Identities = 301/740 (40%), Positives = 434/740 (58%), Gaps = 46/740 (6%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M ++YL+E VL+NL +RY IYTY+G IA+NP++RLP +Y ++ +Y+G +
Sbjct: 83 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 141
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG--------- 111
E+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 142 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 201
Query: 112 GRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 171
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA + TY
Sbjct: 202 ASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETY 260
Query: 172 LLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLGDPKS--FHYLNQSNCYALDGVD 228
LLE+SRV ERNYH FY +C+ A PE+ + L P S + ++NQ C +D +D
Sbjct: 261 LLEKSRVTYQQSAERNYHIFYQICSNAIPELND-VMLVTPDSGLYSFINQG-CLTVDNID 318
Query: 229 DTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEF---AKGEEADS-SVIKDEKS 284
D EE+ A DI+G ++EE+ ++F+ A+ILH+G ++F + E+A+S + EK
Sbjct: 319 DVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKV 378
Query: 285 RFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFD 344
F L +A L AL+ + E++T+ + V S ALAK++Y R+F+
Sbjct: 379 AF-------LCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFN 431
Query: 345 WLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKME 404
WLV ++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +E
Sbjct: 432 WLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILE 491
Query: 405 QEEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT- 462
QEEY KE I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 492 QEEYKKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNH 550
Query: 463 FKSNKRFIKP-KLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKC 516
N+ F KP K +R + F + HYAG V Y +L+KNKD + LL ASK
Sbjct: 551 MGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKE 610
Query: 517 PFVSGXXXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNSTEPHYIRCVKPNN 569
P V+ S F+ L LM+ L ST PH++RC+ PN
Sbjct: 611 PLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNE 670
Query: 570 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNYDD 628
+P + + ++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G D
Sbjct: 671 LKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDG 730
Query: 629 KVACEKILD--KMGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIAR 686
K EKIL +M Y++G TKVF +AG + L+ R E L + Q IR Y+ R
Sbjct: 731 KTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIR 790
Query: 687 KEFIALRKAAIVLQSYWRGI 706
K + L+ I L R I
Sbjct: 791 KAYKKLQDQRIGLSVIQRNI 810
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 526 bits (1355), Expect = e-149, Method: Compositional matrix adjust.
Identities = 301/740 (40%), Positives = 434/740 (58%), Gaps = 46/740 (6%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M ++YL+E VL+NL +RY IYTY+G IA+NP++RLP +Y ++ +Y+G +
Sbjct: 88 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 146
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG--------- 111
E+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 147 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 206
Query: 112 GRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 171
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA + TY
Sbjct: 207 ASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETY 265
Query: 172 LLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLGDPKS--FHYLNQSNCYALDGVD 228
LLE+SRV ERNYH FY +C+ A PE+ + L P S + ++NQ C +D +D
Sbjct: 266 LLEKSRVTYQQSAERNYHIFYQICSNAIPELND-VMLVTPDSGLYSFINQG-CLTVDNID 323
Query: 229 DTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEF---AKGEEADS-SVIKDEKS 284
D EE+ A DI+G ++EE+ ++F+ A+ILH+G ++F + E+A+S + EK
Sbjct: 324 DVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKV 383
Query: 285 RFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFD 344
F L +A L AL+ + E++T+ + V S ALAK++Y R+F+
Sbjct: 384 AF-------LCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFN 436
Query: 345 WLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKME 404
WLV ++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +E
Sbjct: 437 WLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILE 496
Query: 405 QEEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT- 462
QEEY KE I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 497 QEEYKKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNH 555
Query: 463 FKSNKRFIKP-KLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKC 516
N+ F KP K +R + F + HYAG V Y +L+KNKD + LL ASK
Sbjct: 556 MGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKE 615
Query: 517 PFVSGXXXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNSTEPHYIRCVKPNN 569
P V+ S F+ L LM+ L ST PH++RC+ PN
Sbjct: 616 PLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNE 675
Query: 570 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNYDD 628
+P + + ++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G D
Sbjct: 676 LKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDG 735
Query: 629 KVACEKILD--KMGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIAR 686
K EKIL +M Y++G TKVF +AG + L+ R E L + Q IR Y+ R
Sbjct: 736 KTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIR 795
Query: 687 KEFIALRKAAIVLQSYWRGI 706
K + L+ I L R I
Sbjct: 796 KAYKKLQDQRIGLSVIQRNI 815
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 524 bits (1350), Expect = e-148, Method: Compositional matrix adjust.
Identities = 302/741 (40%), Positives = 429/741 (57%), Gaps = 46/741 (6%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M L++L+E +LHNL +RYE IYTY+G IAINP++RLP +Y ++++Y+G +
Sbjct: 88 MANLTFLNEASILHNLRSRYESGFIYTYSGLFCIAINPYRRLP-IYTQGLVDKYRGKRRA 146
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG-------- 112
E+ PH+F+IAD AY+ M+ + ++ S+L++GESGAGKTE TK +++Y A +
Sbjct: 147 EMPPHLFSIADNAYQYMLQDRENQSMLITGESGAGKTENTKKVIQYFALVAASLAGKKDK 206
Query: 113 -----RSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAA 167
+ + T+E Q+++ NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA
Sbjct: 207 KEEEKKKDEKKGTLEDQIVQCNPVLEAYGNAKTTRNNNSSRFGKFIRIHFGTQGKIAGAD 266
Query: 168 VRTYLLERSRVCQISDPERNYHCFY-LLCAAPPEVREK-FKLGDPKSFHYLNQSNCYALD 225
+ TYLLE+SRV ERNYH FY LL A PE EK + DP + ++NQ +D
Sbjct: 267 IETYLLEKSRVTYQQSAERNYHIFYQLLSPAFPENIEKILAVPDPGLYGFINQGTL-TVD 325
Query: 226 GVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFA-KGEEADS-SVIKDEK 283
G+DD EE T A D++G ++EE+ ++++ ILHLG +++ +GE+A++ + EK
Sbjct: 326 GIDDEEEMGLTDTAFDVLGFTDEEKLSMYKCTGCILHLGEMKWKQRGEQAEADGTAEAEK 385
Query: 284 SRFHLNTTA-ELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRL 342
F L A +LLKC L+ + E +T+ + S ALAK++Y R+
Sbjct: 386 VAFLLGVNAGDLLKC--------LLKPKIKVGTEYVTQGRNKDQVTNSIAALAKSLYDRM 437
Query: 343 FDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFK 402
F+WLV ++N ++ + IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F
Sbjct: 438 FNWLVRRVNQTLDTKAKRQFFIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFV 497
Query: 403 MEQEEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQ 461
+EQEEY KE I W +I+F +D Q ++LIE KP GI+++L+E CMFPK++ +F KLY
Sbjct: 498 LEQEEYKKEGIVWEFIDFGLDLQACIELIE-KPMGILSILEEECMFPKASDTSFKNKLYD 556
Query: 462 T-FKSNKRFIKPKLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASK 515
N F KPK + F + HYAG V+Y +LDKNKD + LL SK
Sbjct: 557 NHLGKNPMFGKPKPPKAGCAEAHFCLHHYAGSVSYSIAGWLDKNKDPINENVVELLQNSK 616
Query: 516 CPFVSG-------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPN 568
P V I S K L LM+ L ST PH++RC+ PN
Sbjct: 617 EPIVKMLFTPPRILTPGGKKKKGKSAAFQTISSVHKESLNKLMKNLYSTHPHFVRCIIPN 676
Query: 569 NALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPD-VLDGNYD 627
P + + A ++ QLRC GVLE IRI G+P R + EF R+ +LAP+ V G D
Sbjct: 677 ELKTPGLIDAALVLHQLRCNGVLEGIRICRKGFPNRIIYSEFKQRYSILAPNAVPSGFAD 736
Query: 628 DKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIA 685
KV +K L + L Y++G TKVF +AG + L+ R E L + Q IR Y+
Sbjct: 737 GKVVTDKALSALQLDPNEYRLGNTKVFFKAGVLGMLEDMRDERLSKIISMFQAHIRGYLM 796
Query: 686 RKEFIALRKAAIVLQSYWRGI 706
RK + L+ I L R +
Sbjct: 797 RKAYKKLQDQRIGLTLIQRNV 817
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 517 bits (1331), Expect = e-146, Method: Compositional matrix adjust.
Identities = 295/743 (39%), Positives = 430/743 (57%), Gaps = 49/743 (6%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M ++YL+E VL+NL RY IYTY+G IA+NP++RLP +Y ++ +Y+G +
Sbjct: 88 MANMTYLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 146
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA + V+ +T
Sbjct: 147 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVA--CAVKKKT 204
Query: 121 ------------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAV 168
+E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA +
Sbjct: 205 SEEEEADQKKGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADI 264
Query: 169 RTYLLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLG-DPKSFHYLNQSNCYALDG 226
TYLLE+SRV ERNYH FY +C+ A PE+ E + D + ++NQ C +D
Sbjct: 265 ETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVDN 323
Query: 227 VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEF---AKGEEADS-SVIKDE 282
+DD EE+ A DI+G ++EE+ ++F+ A+ILH+G ++F + E+A+S + E
Sbjct: 324 IDDVEEFKLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAE 383
Query: 283 KSRFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRL 342
K F L +A L AL+ + E++T+ + + S AL+K++Y R+
Sbjct: 384 KVAF-------LCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRM 436
Query: 343 FDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFK 402
F+WLV ++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F
Sbjct: 437 FNWLVKRVNRTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFV 496
Query: 403 MEQEEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQ 461
+EQEEY KE I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F YQ
Sbjct: 497 LEQEEYKKEGIQWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQ 555
Query: 462 T-FKSNKRFIKP-KLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTAS 514
N+ F KP K +R + F + HYAG V Y +LDKNKD + LL S
Sbjct: 556 NHIGKNRMFTKPGKPTRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVS 615
Query: 515 KCPFVS--------GXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVK 566
K P V+ I + + L LM+ L ST PH++RC+
Sbjct: 616 KEPLVAELFRAPDEPAGGAGGKKKKKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCII 675
Query: 567 PNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGN 625
PN +P + + ++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G
Sbjct: 676 PNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGF 735
Query: 626 YDDKVACEKILD--KMGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTY 683
D K EKIL +M Y++G TKVF +AG + L+ R E L + Q IR Y
Sbjct: 736 VDGKTVSEKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGY 795
Query: 684 IARKEFIALRKAAIVLQSYWRGI 706
+ RK + L+ I L R I
Sbjct: 796 LIRKAYKKLQDQRIGLSVIQRNI 818
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 517 bits (1331), Expect = e-146, Method: Compositional matrix adjust.
Identities = 294/740 (39%), Positives = 425/740 (57%), Gaps = 44/740 (5%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M ++YL+E VL+NL RY IYTY+G IA+NP++RLP +Y ++ +Y+G +
Sbjct: 88 MANMTYLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 146
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGR------- 113
E+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE+TK ++ Y A +
Sbjct: 147 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTESTKKVIMYFARVAANLYKQKEE 206
Query: 114 --SGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 171
+ +E Q++E+NPVLEAFGNAKTVRNNNSSRFGKF+ + F G+I+GA + TY
Sbjct: 207 PVPNLRASNLEDQIIEANPVLEAFGNAKTVRNNNSSRFGKFIRIHFGPTGKIAGADIETY 266
Query: 172 LLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLG-DPKSFHYLNQSNCYALDGVDD 229
LLE+SRV ERNYH FY +C+ A PE+ E + D + ++NQ C +D +DD
Sbjct: 267 LLEKSRVTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVDNIDD 325
Query: 230 TEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEF---AKGEEADS-SVIKDEKSR 285
EE+ A DI+G ++EE+ ++F+ A+ILH+G ++F + E+A+S + EK
Sbjct: 326 VEEFKLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVA 385
Query: 286 FHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDW 345
F L +A L AL+ + E++T+ + + S AL+K++Y R+F+W
Sbjct: 386 F-------LCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNW 438
Query: 346 LVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQ 405
LV ++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQ
Sbjct: 439 LVKRVNRTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQ 498
Query: 406 EEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT-F 463
EEY KE I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F YQ
Sbjct: 499 EEYKKEGIQWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQNHI 557
Query: 464 KSNKRFIKP-KLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCP 517
N+ F KP K +R + F + HYAG V Y +LDKNKD + LL SK P
Sbjct: 558 GKNRMFTKPGKPTRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEP 617
Query: 518 FVS--------GXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNN 569
V+ I + + L LM L T PH++RC+ PN
Sbjct: 618 LVAELFRAPDEPAGGAGGKKKKKSSAFQTISAVHRESLNKLMCNLRRTNPHFVRCIIPNL 677
Query: 570 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNYDD 628
P + + ++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G D
Sbjct: 678 EKDPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDG 737
Query: 629 KVACEKILD--KMGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIAR 686
K EKIL +M Y++G TKVF +AG + L+ R E L + Q IR Y+ R
Sbjct: 738 KTVSEKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIR 797
Query: 687 KEFIALRKAAIVLQSYWRGI 706
K + L+ I L R I
Sbjct: 798 KAYKKLQDQRIGLSVIQRNI 817
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust.
Identities = 283/699 (40%), Positives = 399/699 (57%), Gaps = 30/699 (4%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G +
Sbjct: 64 LMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMP 123
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQ 123
PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ ++
Sbjct: 124 PHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDD 179
Query: 124 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISD 183
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 180 RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGK 239
Query: 184 PERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRRAMDI 242
ERNYH FY LCA E +RE+ L P +F YLN+ +DD +++ AM
Sbjct: 240 EERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKK 299
Query: 243 VGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAKSL 302
+G+ +EE+ +FRVVA +LHLGNI+F + KS L AELL D L
Sbjct: 300 IGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL 359
Query: 303 EDALINRVMVTPE-----EVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQD 357
+L RVM+T VI L A +RDALAKTVYS LFD +V+++N +
Sbjct: 360 RVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFE 419
Query: 358 PNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSY 417
+S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y KE + +
Sbjct: 420 TSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNE 478
Query: 418 IEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLSRT 477
+ +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K + R P+ S+
Sbjct: 479 VHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKL 538
Query: 478 S----------FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFV------SG 521
+ F I H+AG V Y F++KN D + + L+ S+ F+ S
Sbjct: 539 AIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESST 598
Query: 522 XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANI 581
+G++FK QL L++ L ST +IRC+KPN + FE A I
Sbjct: 599 NNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQI 658
Query: 582 IQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL 641
+ QL+C G++ + + G+P+R +F+E + + PD L D ++ C+ + +GL
Sbjct: 659 LSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKALGL 717
Query: 642 K--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQR 678
Y+ G TKVF R G+ AE D + A +++R
Sbjct: 718 NEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKR 756
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust.
Identities = 283/699 (40%), Positives = 399/699 (57%), Gaps = 30/699 (4%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G +
Sbjct: 65 LMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMP 124
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQ 123
PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ ++
Sbjct: 125 PHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDD 180
Query: 124 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISD 183
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 181 RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGK 240
Query: 184 PERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRRAMDI 242
ERNYH FY LCA E +RE+ L P +F YLN+ +DD +++ AM
Sbjct: 241 EERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKK 300
Query: 243 VGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAKSL 302
+G+ +EE+ +FRVVA +LHLGNI+F + KS L AELL D L
Sbjct: 301 IGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL 360
Query: 303 EDALINRVMVTPE-----EVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQD 357
+L RVM+T VI L A +RDALAKTVYS LFD +V+++N +
Sbjct: 361 RVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFE 420
Query: 358 PNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSY 417
+S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y KE + +
Sbjct: 421 TSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNE 479
Query: 418 IEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLSRT 477
+ +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K + R P+ S+
Sbjct: 480 VHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKL 539
Query: 478 S----------FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFV------SG 521
+ F I H+AG V Y F++KN D + + L+ S+ F+ S
Sbjct: 540 AIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESST 599
Query: 522 XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANI 581
+G++FK QL L++ L ST +IRC+KPN + FE A I
Sbjct: 600 NNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQI 659
Query: 582 IQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL 641
+ QL+C G++ + + G+P+R +F+E + + PD L D ++ C+ + +GL
Sbjct: 660 LSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKALGL 718
Query: 642 K--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQR 678
Y+ G TKVF R G+ AE D + A +++R
Sbjct: 719 NEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKR 757
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 506 bits (1303), Expect = e-143, Method: Compositional matrix adjust.
Identities = 283/699 (40%), Positives = 398/699 (56%), Gaps = 30/699 (4%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G +
Sbjct: 64 LMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMP 123
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQ 123
PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 124 PHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIYD 179
Query: 124 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISD 183
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 180 RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGK 239
Query: 184 PERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRRAMDI 242
ERNYH FY LCA E +RE+ L P +F YLN+ +DD +++ AM
Sbjct: 240 EERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKK 299
Query: 243 VGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAKSL 302
+G+ +EE+ +FRVVA +LHLGNI+F + KS L AELL D L
Sbjct: 300 IGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL 359
Query: 303 EDALINRVMVTPE-----EVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQD 357
+L RVM+T VI L A +RDALAKTVYS LFD +V+++N +
Sbjct: 360 RVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFE 419
Query: 358 PNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSY 417
+S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y KE + +
Sbjct: 420 TSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNE 478
Query: 418 IEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLSRT 477
+ +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K + R P+ S+
Sbjct: 479 VHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKL 538
Query: 478 S----------FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFV------SG 521
+ F I H+AG V Y F++KN D + + L+ S+ F+ S
Sbjct: 539 AIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESST 598
Query: 522 XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANI 581
+G++FK QL L++ L ST +IRC+KPN + FE A I
Sbjct: 599 NNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQI 658
Query: 582 IQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL 641
+ QL+C G++ + + G+P+R +F+E + + PD L D ++ C+ + +GL
Sbjct: 659 LSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKALGL 717
Query: 642 K--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQR 678
Y+ G TKVF R G+ AE D + A +++R
Sbjct: 718 NEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKR 756
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 498 bits (1283), Expect = e-141, Method: Compositional matrix adjust.
Identities = 284/725 (39%), Positives = 401/725 (55%), Gaps = 56/725 (7%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G +
Sbjct: 64 LMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMP 123
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQ 123
PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ ++
Sbjct: 124 PHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDD 179
Query: 124 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISD 183
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 180 RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGK 239
Query: 184 PERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN------------------------- 217
ERNYH FY LCA E +RE+ L P +F YLN
Sbjct: 240 EERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEY 299
Query: 218 -QSNCYALDGVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADS 276
++ G+DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 300 LKAGSLKDPGLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSG 359
Query: 277 SVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVGSR 331
KS L AELL D L +L RVM+T VI L A +R
Sbjct: 360 GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNAR 419
Query: 332 DALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEK 391
DALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ NEK
Sbjct: 420 DALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEK 478
Query: 392 LQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKST 451
LQQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+ +
Sbjct: 479 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 538
Query: 452 HETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKNKD 501
+ F ++Q K + R P+ S+ + F I H+AG V Y F++KN D
Sbjct: 539 DQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNND 598
Query: 502 YVVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLN 555
+ + L+ S+ F+ S +G++FK QL L++ L
Sbjct: 599 ALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLR 658
Query: 556 STEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFG 615
ST +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E + +
Sbjct: 659 STGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYK 718
Query: 616 VLAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAA 673
PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D + A
Sbjct: 719 KYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLA 777
Query: 674 RIIQR 678
+++R
Sbjct: 778 ELVKR 782
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 497 bits (1279), Expect = e-140, Method: Compositional matrix adjust.
Identities = 297/787 (37%), Positives = 422/787 (53%), Gaps = 77/787 (9%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G +
Sbjct: 65 LMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMP 124
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQ 123
PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ ++
Sbjct: 125 PHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDD 180
Query: 124 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISD 183
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 181 RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGK 240
Query: 184 PERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSNCY 222
ERNYH FY LCA E +RE+ L P +F YLN +S Y
Sbjct: 241 EERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEY 300
Query: 223 ALDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADS 276
G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 301 LKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSG 360
Query: 277 SVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVGSR 331
KS L AELL D L +L RVM+T VI L A +R
Sbjct: 361 GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNAR 420
Query: 332 DALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEK 391
DALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ NEK
Sbjct: 421 DALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEK 479
Query: 392 LQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKST 451
LQQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+ +
Sbjct: 480 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 539
Query: 452 HETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKNKD 501
+ F ++Q K + R P+ S+ + F I H+AG V Y F++KN D
Sbjct: 540 DQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNND 599
Query: 502 YVVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLN 555
+ + L+ S+ F+ S +G++FK QL L++ L
Sbjct: 600 ALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLR 659
Query: 556 STEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFG 615
ST +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E + +
Sbjct: 660 STGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYK 719
Query: 616 VLAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAA 673
PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D + A
Sbjct: 720 KYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLA 778
Query: 674 RIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILAC-----KLYEQLR-REAAALKIQKN 727
+++R I S W+ + C KL +++ R A +K+QK
Sbjct: 779 ELVKRVNHWLIC---------------SRWKKVQWCSLSVIKLKNKIKYRAEACIKMQKT 823
Query: 728 FHSYTAR 734
+ +
Sbjct: 824 IRMWLCK 830
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 496 bits (1277), Expect = e-140, Method: Compositional matrix adjust.
Identities = 286/725 (39%), Positives = 402/725 (55%), Gaps = 56/725 (7%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G +
Sbjct: 64 LMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMP 123
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQ 123
PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ ++
Sbjct: 124 PHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDD 179
Query: 124 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISD 183
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 180 RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGK 239
Query: 184 PERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSNCY 222
ERNYH FY LCA E +RE+ L P +F YLN +S Y
Sbjct: 240 EERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEY 299
Query: 223 ALDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADS 276
G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 300 LKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSG 359
Query: 277 SVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVGSR 331
KS L AELL D L +L RVM+T VI L A +R
Sbjct: 360 GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNAR 419
Query: 332 DALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEK 391
DALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ NEK
Sbjct: 420 DALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEK 478
Query: 392 LQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKST 451
LQQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+ +
Sbjct: 479 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 538
Query: 452 HETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKNKD 501
+ F ++Q K + R P+ S+ + F I H+AG V Y F++KN D
Sbjct: 539 DQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNND 598
Query: 502 YVVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLN 555
+ + L+ S+ F+ S +G++FK QL L++ L
Sbjct: 599 ALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLR 658
Query: 556 STEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFG 615
ST +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E + +
Sbjct: 659 STGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYK 718
Query: 616 VLAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAA 673
PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D + A
Sbjct: 719 KYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLA 777
Query: 674 RIIQR 678
+++R
Sbjct: 778 ELVKR 782
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 496 bits (1276), Expect = e-140, Method: Compositional matrix adjust.
Identities = 286/725 (39%), Positives = 402/725 (55%), Gaps = 56/725 (7%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G +
Sbjct: 74 LMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMP 133
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQ 123
PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ ++
Sbjct: 134 PHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDD 189
Query: 124 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISD 183
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 190 RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGK 249
Query: 184 PERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSNCY 222
ERNYH FY LCA E +RE+ L P +F YLN +S Y
Sbjct: 250 EERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEY 309
Query: 223 ALDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADS 276
G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 310 LKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSG 369
Query: 277 SVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVGSR 331
KS L AELL D L +L RVM+T VI L A +R
Sbjct: 370 GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNAR 429
Query: 332 DALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEK 391
DALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ NEK
Sbjct: 430 DALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEK 488
Query: 392 LQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKST 451
LQQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+ +
Sbjct: 489 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 548
Query: 452 HETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKNKD 501
+ F ++Q K + R P+ S+ + F I H+AG V Y F++KN D
Sbjct: 549 DQHFTSAVHQKHKDHFRLSIPRKSKLAIHENIRDDEGFIIRHFAGAVCYETTQFVEKNND 608
Query: 502 YVVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLN 555
+ + L+ S+ F+ S +G++FK QL L++ L
Sbjct: 609 ALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLR 668
Query: 556 STEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFG 615
ST +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E + +
Sbjct: 669 STGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYK 728
Query: 616 VLAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAA 673
PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D + A
Sbjct: 729 KYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLA 787
Query: 674 RIIQR 678
+++R
Sbjct: 788 ELVKR 792
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 496 bits (1276), Expect = e-140, Method: Compositional matrix adjust.
Identities = 286/725 (39%), Positives = 402/725 (55%), Gaps = 56/725 (7%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G +
Sbjct: 74 LMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMP 133
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQ 123
PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ ++
Sbjct: 134 PHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDD 189
Query: 124 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISD 183
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 190 RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGK 249
Query: 184 PERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSNCY 222
ERNYH FY LCA E +RE+ L P +F YLN +S Y
Sbjct: 250 EERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEY 309
Query: 223 ALDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADS 276
G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 310 LKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSG 369
Query: 277 SVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVGSR 331
KS L AELL D L +L RVM+T VI L A +R
Sbjct: 370 GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNAR 429
Query: 332 DALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEK 391
DALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ NEK
Sbjct: 430 DALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEK 488
Query: 392 LQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKST 451
LQQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+ +
Sbjct: 489 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 548
Query: 452 HETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKNKD 501
+ F ++Q K + R P+ S+ + F I H+AG V Y F++KN D
Sbjct: 549 DQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNND 608
Query: 502 YVVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLN 555
+ + L+ S+ F+ S +G++FK QL L++ L
Sbjct: 609 ALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLR 668
Query: 556 STEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFG 615
ST +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E + +
Sbjct: 669 STGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYK 728
Query: 616 VLAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAA 673
PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D + A
Sbjct: 729 KYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLA 787
Query: 674 RIIQR 678
+++R
Sbjct: 788 ELVKR 792
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 495 bits (1275), Expect = e-140, Method: Compositional matrix adjust.
Identities = 286/725 (39%), Positives = 402/725 (55%), Gaps = 56/725 (7%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G +
Sbjct: 61 LMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMP 120
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQ 123
PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ ++
Sbjct: 121 PHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDD 176
Query: 124 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISD 183
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 177 RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGK 236
Query: 184 PERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSNCY 222
ERNYH FY LCA E +RE+ L P +F YLN +S Y
Sbjct: 237 EERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEY 296
Query: 223 ALDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADS 276
G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 297 LKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSG 356
Query: 277 SVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVGSR 331
KS L AELL D L +L RVM+T VI L A +R
Sbjct: 357 GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNAR 416
Query: 332 DALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEK 391
DALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ NEK
Sbjct: 417 DALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEK 475
Query: 392 LQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKST 451
LQQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+ +
Sbjct: 476 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 535
Query: 452 HETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKNKD 501
+ F ++Q K + R P+ S+ + F I H+AG V Y F++KN D
Sbjct: 536 DQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNND 595
Query: 502 YVVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLN 555
+ + L+ S+ F+ S +G++FK QL L++ L
Sbjct: 596 ALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLR 655
Query: 556 STEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFG 615
ST +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E + +
Sbjct: 656 STGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYK 715
Query: 616 VLAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAA 673
PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D + A
Sbjct: 716 KYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLA 774
Query: 674 RIIQR 678
+++R
Sbjct: 775 ELVKR 779
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 495 bits (1274), Expect = e-140, Method: Compositional matrix adjust.
Identities = 286/725 (39%), Positives = 401/725 (55%), Gaps = 56/725 (7%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G +
Sbjct: 64 LMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMP 123
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQ 123
PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 124 PHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIYD 179
Query: 124 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISD 183
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 180 RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGK 239
Query: 184 PERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSNCY 222
ERNYH FY LCA E +RE+ L P +F YLN +S Y
Sbjct: 240 EERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEY 299
Query: 223 ALDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADS 276
G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 300 LKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSG 359
Query: 277 SVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVGSR 331
KS L AELL D L +L RVM+T VI L A +R
Sbjct: 360 GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNAR 419
Query: 332 DALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEK 391
DALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ NEK
Sbjct: 420 DALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEK 478
Query: 392 LQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKST 451
LQQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+ +
Sbjct: 479 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 538
Query: 452 HETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKNKD 501
+ F ++Q K + R P+ S+ + F I H+AG V Y F++KN D
Sbjct: 539 DQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNND 598
Query: 502 YVVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLN 555
+ + L+ S+ F+ S +G++FK QL L++ L
Sbjct: 599 ALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLR 658
Query: 556 STEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFG 615
ST +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E + +
Sbjct: 659 STGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYK 718
Query: 616 VLAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAA 673
PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D + A
Sbjct: 719 KYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLA 777
Query: 674 RIIQR 678
+++R
Sbjct: 778 ELVKR 782
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 286/725 (39%), Positives = 402/725 (55%), Gaps = 56/725 (7%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G +
Sbjct: 65 LMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMP 124
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQ 123
PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL S G+ ++
Sbjct: 125 PHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGTGQDIDD 180
Query: 124 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISD 183
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 181 RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGK 240
Query: 184 PERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSNCY 222
ERNYH FY LCA E +RE+ L P +F YLN +S Y
Sbjct: 241 EERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEY 300
Query: 223 ALDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADS 276
G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 301 LKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSG 360
Query: 277 SVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVGSR 331
KS L AELL D L +L RVM+T VI L A +R
Sbjct: 361 GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNAR 420
Query: 332 DALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEK 391
DALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ NEK
Sbjct: 421 DALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEK 479
Query: 392 LQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKST 451
LQQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+ +
Sbjct: 480 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 539
Query: 452 HETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKNKD 501
+ F ++Q K + R P+ S+ + F I H+AG V Y F++KN D
Sbjct: 540 DQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNND 599
Query: 502 YVVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLN 555
+ + L+ S+ F+ S +G++FK QL L++ L
Sbjct: 600 ALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLR 659
Query: 556 STEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFG 615
ST +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E + +
Sbjct: 660 STGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYK 719
Query: 616 VLAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAA 673
PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D + A
Sbjct: 720 KYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLA 778
Query: 674 RIIQR 678
+++R
Sbjct: 779 ELVKR 783
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 494 bits (1272), Expect = e-139, Method: Compositional matrix adjust.
Identities = 286/725 (39%), Positives = 401/725 (55%), Gaps = 56/725 (7%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G +
Sbjct: 62 LMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMP 121
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQ 123
PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 122 PHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIYD 177
Query: 124 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISD 183
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 178 RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGK 237
Query: 184 PERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSNCY 222
ERNYH FY LCA E +RE+ L P +F YLN +S Y
Sbjct: 238 EERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEY 297
Query: 223 ALDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADS 276
G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 298 LKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSG 357
Query: 277 SVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVGSR 331
KS L AELL D L +L RVM+T VI L A +R
Sbjct: 358 GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNAR 417
Query: 332 DALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEK 391
DALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ NEK
Sbjct: 418 DALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEK 476
Query: 392 LQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKST 451
LQQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+ +
Sbjct: 477 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 536
Query: 452 HETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKNKD 501
+ F ++Q K + R P+ S+ + F I H+AG V Y F++KN D
Sbjct: 537 DQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNND 596
Query: 502 YVVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLN 555
+ + L+ S+ F+ S +G++FK QL L++ L
Sbjct: 597 ALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLR 656
Query: 556 STEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFG 615
ST +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E + +
Sbjct: 657 STGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYK 716
Query: 616 VLAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAA 673
PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D + A
Sbjct: 717 KYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLA 775
Query: 674 RIIQR 678
+++R
Sbjct: 776 ELVKR 780
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 493 bits (1269), Expect = e-139, Method: Compositional matrix adjust.
Identities = 284/736 (38%), Positives = 418/736 (56%), Gaps = 59/736 (8%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M +L+ L+E VLHNL RY IYTY+G + INP+++LP +Y +++ YKG +
Sbjct: 88 MAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRH 146
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E+ PH++AIAD AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 147 EMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDT 206
Query: 121 ------------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAV 168
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ + FD G I GA +
Sbjct: 207 SITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANI 266
Query: 169 RTYLLERSRVCQISDPERNYHCF-YLLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGV 227
TYLLE+SR + + ER +H F YL+ A ++R L ++ +L+ + +
Sbjct: 267 ETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQ 325
Query: 228 DDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFH 287
D E + T AM I+G +EEEQ +I RVV+++L LGNI F K D + + D
Sbjct: 326 QDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPD------ 379
Query: 288 LNTTAELLKCDAKSLEDALINRVMVTP-----EEVITRTLDPVAAVGSRDALAKTVYSRL 342
NT A+ + C + R ++TP +V+ + A + +ALAK + RL
Sbjct: 380 -NTAAQKV-CHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERL 437
Query: 343 FDWLVDKINSSIGQDPNSR---TIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQH 399
F W++ ++N ++ D R + +G+LDI GFE F++NSFEQ CIN+TNEKLQQ FN
Sbjct: 438 FRWILTRVNKAL--DKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHT 495
Query: 400 VFKMEQEEYTKEEINWSYIEF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFA 456
+F +EQEEY +E I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F
Sbjct: 496 MFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFV 555
Query: 457 QKLYQTFKSNKRFIKPKL--SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTAS 514
+KL Q ++ +F K K +T F I HYAG+VTY A +L KN D + LL S
Sbjct: 556 EKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQS 615
Query: 515 KCPFVSG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNS 556
FV+ +G +K QL LM TL +
Sbjct: 616 SDKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRN 675
Query: 557 TEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGV 616
T P+++RC+ PN+ R + +++QLRC GVLE IRI G+P R F EF R+ +
Sbjct: 676 TNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEI 735
Query: 617 LAPDVL-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAA 673
LA + + G D K AC ++ + L Y+IG++K+F R G +A L+ R + +
Sbjct: 736 LAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVI 795
Query: 674 RIIQRQIRTYIARKEF 689
Q Q R Y+ARK F
Sbjct: 796 IAFQAQCRGYLARKAF 811
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 20/155 (12%)
Query: 828 LEKRVEELTWRLQFEKQLRTNL--EEEKAQEIAKLQDALQAMQLQVEEANFRILKEQEAA 885
LE+RV +LT TNL EEEKA+ + KL++ ++M + E R LK++E +
Sbjct: 1009 LEERVSDLT----------TNLAEEEEKAKNLTKLKNKHESM---ISELEVR-LKKEEKS 1054
Query: 886 RKAIEEAPPIVKETPVIVHDTEKIESLTAEVDSLKALLLSERQSAEEARKACMDAEVRNT 945
R+ +E+ ++ +H E+I L A++ LKA L + + + A D +
Sbjct: 1055 RQELEKIKRKLEGESSDLH--EQIAELQAQIAELKAQLAKKEEELQAALARLEDETSQKN 1112
Query: 946 ELVKKLEDTEEKVGQLQESMQRLEEKLCNSESENQ 980
+KK+ + E + LQE ++ EK +++E Q
Sbjct: 1113 NALKKIRELESHISDLQEDLE--SEKAARNKAEKQ 1145
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 810 NLKMAARETGALKEAKDKLEKRVEELTWRLQFEKQLRTNLEEEKAQ---EIAKLQDALQA 866
NL + L + K+K E + EL RL+ E++ R LE+ K + E + L + +
Sbjct: 1019 NLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAE 1078
Query: 867 MQLQVEEANFRILKEQEAARKAIEEAPPIVKETPVIVHDTEKIESLTAEVDSLKALLLSE 926
+Q Q+ E ++ K++E + A+ + ET + +KI L + + L+ L SE
Sbjct: 1079 LQAQIAELKAQLAKKEEELQAAL---ARLEDETSQKNNALKKIRELESHISDLQEDLESE 1135
Query: 927 RQSAEEARKACMDAEVRNTELVKKLEDTEEKVGQLQE 963
+ + +A K D L +LEDT + QE
Sbjct: 1136 KAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQE 1172
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 492 bits (1267), Expect = e-139, Method: Compositional matrix adjust.
Identities = 290/763 (38%), Positives = 427/763 (55%), Gaps = 62/763 (8%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M +L+ L+E VLHNL RY IYTY+G + INP+++LP +Y +++ YKG +
Sbjct: 88 MAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRH 146
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E+ PH++AIAD AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 147 EMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDT 206
Query: 121 ------------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAV 168
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ + FD G I GA +
Sbjct: 207 SITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANI 266
Query: 169 RTYLLERSRVCQISDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGV 227
TYLLE+SR + + ER +H FY L A E +R L ++ +L+ + +
Sbjct: 267 ETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQ 325
Query: 228 DDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFH 287
D E + T AM I+G +EEEQ +I RVV+++L LGNI F K D + + D
Sbjct: 326 QDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPD------ 379
Query: 288 LNTTAELLKCDAKSLEDALINRVMVTP-----EEVITRTLDPVAAVGSRDALAKTVYSRL 342
NT A+ + C + R ++TP +V+ + A + +ALAK + RL
Sbjct: 380 -NTAAQKV-CHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERL 437
Query: 343 FDWLVDKINSSIGQDPNSR---TIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQH 399
F W++ ++N ++ D R + +G+LDI GFE F++NSFEQ CIN+TNEKLQQ FN
Sbjct: 438 FRWILTRVNKAL--DKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHT 495
Query: 400 VFKMEQEEYTKEEINWSYIEF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFA 456
+F +EQEEY +E I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F
Sbjct: 496 MFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFV 555
Query: 457 QKLYQTFKSNKRFIKPKL--SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTAS 514
+KL Q ++ +F K K +T F I HYAG+VTY A +L KN D + LL S
Sbjct: 556 EKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQS 615
Query: 515 KCPFVSG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNS 556
FV+ +G +K QL LM TL +
Sbjct: 616 SDKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRN 675
Query: 557 TEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGV 616
T P+++RC+ PN+ R + +++QLRC GVLE IRI G+P R F EF R+ +
Sbjct: 676 TNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEI 735
Query: 617 LAPDVL-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAA 673
LA + + G D K AC ++ + L Y+IG++K+F R G +A L+ R + +
Sbjct: 736 LAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVI 795
Query: 674 RIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLR 716
Q Q R Y+ARK F ++ ++ R C Y +LR
Sbjct: 796 IAFQAQCRGYLARKAFAKRQQQLTAMKVIQRN---CAAYLKLR 835
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 492 bits (1267), Expect = e-139, Method: Compositional matrix adjust.
Identities = 290/763 (38%), Positives = 427/763 (55%), Gaps = 62/763 (8%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M +L+ L+E VLHNL RY IYTY+G + INP+++LP +Y +++ YKG +
Sbjct: 88 MAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRH 146
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E+ PH++AIAD AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 147 EMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDT 206
Query: 121 ------------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAV 168
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ + FD G I GA +
Sbjct: 207 SITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANI 266
Query: 169 RTYLLERSRVCQISDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGV 227
TYLLE+SR + + ER +H FY L A E +R L ++ +L+ + +
Sbjct: 267 ETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQ 325
Query: 228 DDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFH 287
D E + T AM I+G +EEEQ +I RVV+++L LGNI F K D + + D
Sbjct: 326 QDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPD------ 379
Query: 288 LNTTAELLKCDAKSLEDALINRVMVTP-----EEVITRTLDPVAAVGSRDALAKTVYSRL 342
NT A+ + C + R ++TP +V+ + A + +ALAK + RL
Sbjct: 380 -NTAAQKV-CHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERL 437
Query: 343 FDWLVDKINSSIGQDPNSR---TIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQH 399
F W++ ++N ++ D R + +G+LDI GFE F++NSFEQ CIN+TNEKLQQ FN
Sbjct: 438 FRWILTRVNKAL--DKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHT 495
Query: 400 VFKMEQEEYTKEEINWSYIEF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFA 456
+F +EQEEY +E I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F
Sbjct: 496 MFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFV 555
Query: 457 QKLYQTFKSNKRFIKPKL--SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTAS 514
+KL Q ++ +F K K +T F I HYAG+VTY A +L KN D + LL S
Sbjct: 556 EKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQS 615
Query: 515 KCPFVSG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNS 556
FV+ +G +K QL LM TL +
Sbjct: 616 SDKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRN 675
Query: 557 TEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGV 616
T P+++RC+ PN+ R + +++QLRC GVLE IRI G+P R F EF R+ +
Sbjct: 676 TNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEI 735
Query: 617 LAPDVL-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAA 673
LA + + G D K AC ++ + L Y+IG++K+F R G +A L+ R + +
Sbjct: 736 LAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVI 795
Query: 674 RIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLR 716
Q Q R Y+ARK F ++ ++ R C Y +LR
Sbjct: 796 IAFQAQCRGYLARKAFAKRQQQLTAMKVIQRN---CAAYLKLR 835
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 288/761 (37%), Positives = 426/761 (55%), Gaps = 58/761 (7%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M +L+ L+E VLHNL RY IYTY+G + INP+++LP +Y +++ YKG +
Sbjct: 88 MAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRH 146
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E+ PH++AIAD AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 147 EMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDT 206
Query: 121 ------------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAV 168
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ + FD G I GA +
Sbjct: 207 SITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANI 266
Query: 169 RTYLLERSRVCQISDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGV 227
TYLLE+SR + + ER +H FY L A E +R L ++ +L+ + +
Sbjct: 267 ETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQ 325
Query: 228 DDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFH 287
D E + T AM I+G +EEEQ +I RVV+++L LGNI F K D + + D
Sbjct: 326 QDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPD------ 379
Query: 288 LNTTAELLKCDAKSLEDALINRVMVTP-----EEVITRTLDPVAAVGSRDALAKTVYSRL 342
NT A+ + C + R ++TP +V+ + A + +ALAK + RL
Sbjct: 380 -NTAAQKV-CHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERL 437
Query: 343 FDWLVDKINSSIGQDP-NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVF 401
F W++ ++N ++ + + +G+LDI GFE F++NSFEQ CIN+TNEKLQQ FN +F
Sbjct: 438 FRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMF 497
Query: 402 KMEQEEYTKEEINWSYIEF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFAQK 458
+EQEEY +E I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +K
Sbjct: 498 ILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEK 557
Query: 459 LYQTFKSNKRFIKPKL--SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKC 516
L Q ++ +F K K +T F I HYAG+VTY A +L KN D + LL S
Sbjct: 558 LIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSD 617
Query: 517 PFVSG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTE 558
FV+ +G +K QL LM TL +T
Sbjct: 618 KFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTN 677
Query: 559 PHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLA 618
P+++RC+ PN+ R + +++QLRC GVLE IRI G+P R F EF R+ +LA
Sbjct: 678 PNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILA 737
Query: 619 PDVL-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARI 675
+ + G D K AC ++ + L Y+IG++K+F R G +A L+ R + +
Sbjct: 738 ANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIA 797
Query: 676 IQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLR 716
Q Q R Y+ARK F ++ ++ R C Y +LR
Sbjct: 798 FQAQCRGYLARKAFAKRQQQLTAMKVIQRN---CAAYLKLR 835
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 487 bits (1254), Expect = e-137, Method: Compositional matrix adjust.
Identities = 283/734 (38%), Positives = 416/734 (56%), Gaps = 55/734 (7%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M +L+ L+E VLHNL RY IYTY+G + INP+++LP +Y +++ YKG +
Sbjct: 88 MAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRH 146
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E+ PH++AIAD AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 147 EMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDT 206
Query: 121 ------------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAV 168
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ + FD G I GA +
Sbjct: 207 SITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANI 266
Query: 169 RTYLLERSRVCQISDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGV 227
TYLLE+SR + + ER +H FY L A E +R L ++ +L+ + +
Sbjct: 267 ETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQ 325
Query: 228 DDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFH 287
D E + T AM I+G +EEEQ +I RVV+++L LGNI F K D + + D
Sbjct: 326 QDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPD------ 379
Query: 288 LNTTAELLKCDAKSLEDALINRVMVTP-----EEVITRTLDPVAAVGSRDALAKTVYSRL 342
NT A+ + C + R ++TP +V+ + A + +ALAK + RL
Sbjct: 380 -NTAAQKV-CHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERL 437
Query: 343 FDWLVDKINSSIGQDP-NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVF 401
F W++ ++N ++ + + +G+LDI GFE F++NSFEQ CIN+TNEKLQQ FN +F
Sbjct: 438 FRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMF 497
Query: 402 KMEQEEYTKEEINWSYIEF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFAQK 458
+EQEEY +E I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +K
Sbjct: 498 ILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEK 557
Query: 459 LYQTFKSNKRFIKPKL--SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKC 516
L Q ++ +F K K +T F I HYAG+VTY A +L KN D + LL S
Sbjct: 558 LIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSD 617
Query: 517 PFVSG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTE 558
FV+ +G +K QL LM TL +T
Sbjct: 618 KFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTN 677
Query: 559 PHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLA 618
P+++RC+ PN+ R + +++QLRC GVLE IRI G+P R F EF R+ +LA
Sbjct: 678 PNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILA 737
Query: 619 PDVL-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARI 675
+ + G D K AC ++ + L Y+IG++K+F R G +A L+ R + +
Sbjct: 738 ANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIA 797
Query: 676 IQRQIRTYIARKEF 689
Q Q R Y+ARK F
Sbjct: 798 FQAQCRGYLARKAF 811
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 483 bits (1243), Expect = e-136, Method: Compositional matrix adjust.
Identities = 280/754 (37%), Positives = 427/754 (56%), Gaps = 49/754 (6%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M +++LHEP VL+NL RY IYTY+G + +NP++ LP +Y+ ++ Y+G +
Sbjct: 88 MAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLP-VYNPKVVLAYRGKKRQ 146
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG-------- 112
E PH+F+I+D AY+ M+ + ++ SIL++GESGAGKT TK +++Y A +
Sbjct: 147 EAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEE 206
Query: 113 RSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYL 172
+SG T+E Q++ +NP+LEAFGNAKTVRN+NSSRFGKF+ + F G+++ A + TYL
Sbjct: 207 QSGKMQGTLEDQIISANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYL 266
Query: 173 LERSRVCQISDPERNYHCFY-LLCAAPPEVREKFKLG-DPKSFHYLNQSNCYALDGVDDT 230
LE+SRV ER+YH FY ++ PE+ + + +P +HY++Q + +DD
Sbjct: 267 LEKSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYHYVSQGEI-TVPSIDDQ 325
Query: 231 EEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGE-----EADSSVIKDEKSR 285
EE +AT A+DI+G S +E+ AI+++ A++H GN++F + + E D + + D+ +
Sbjct: 326 EELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAY 385
Query: 286 FHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDW 345
+AELLK A + VT + +++ + V A LAK VY ++F W
Sbjct: 386 LMGLNSAELLK--ALCYPRVKVGNEFVTKGQTVSQVHNSVGA------LAKAVYEKMFLW 437
Query: 346 LVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQ 405
+V +IN + + IGVLDI GFE F NSFEQ CINFTNEKLQQ FN H+F +EQ
Sbjct: 438 MVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQ 497
Query: 406 EEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLY-QTF 463
EEY KE I W +I+F +D ++LIE KP GI ++L+E CMFPK+T +F KLY Q
Sbjct: 498 EEYKKEGIEWEFIDFGMDLAACIELIE-KPMGIFSILEEECMFPKATDTSFKNKLYDQHL 556
Query: 464 KSNKRFIKPKLSR----TSFTISHYAGEVTYLADLFLDKNKD----YVVAEHQ------V 509
+ F KPK ++ F++ HYAG V Y +L+KNKD V+ +Q +
Sbjct: 557 GKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTL 616
Query: 510 LLTASKCPFVSGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNN 569
L + + + + F+ L LM L ST PH++RC+ PN
Sbjct: 617 ALLFATYGGEAEGGGGKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNE 676
Query: 570 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVL-APDVLDGNY-D 627
P E+ ++ QLRC GVLE IRI G+P+R + +F R+ VL A + +G + D
Sbjct: 677 TKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMD 736
Query: 628 DKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIA 685
K A EK+L + + Y+ G TKVF +AG + L+ R + L Q + R ++
Sbjct: 737 SKKASEKLLGSIDVDHTQYRFGHTKVFFKAGLLGLLEEMRDDKLAEIITRTQARCRGFLM 796
Query: 686 RKEF---IALRKAAIVLQSYWRGILACKLYEQLR 716
R E+ + R++ +Q R + K + ++
Sbjct: 797 RVEYRRMVERRESIFCIQYNVRSFMNVKHWPWMK 830
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 275/710 (38%), Positives = 405/710 (57%), Gaps = 55/710 (7%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M +L+ L+E VLHNL RY IYTY+G + INP+++LP +Y +++ YKG +
Sbjct: 88 MAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRH 146
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
E+ PH++AIAD AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 147 EMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDT 206
Query: 121 ------------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAV 168
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ + FD G I GA +
Sbjct: 207 SITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANI 266
Query: 169 RTYLLERSRVCQISDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGV 227
TYLLE+SR + + ER +H FY L A E +R L ++ +L+ + +
Sbjct: 267 ETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQ 325
Query: 228 DDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFH 287
D E + T AM I+G +EEEQ +I RVV+++L LGNI F K D + + D
Sbjct: 326 QDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPD------ 379
Query: 288 LNTTAELLKCDAKSLEDALINRVMVTP-----EEVITRTLDPVAAVGSRDALAKTVYSRL 342
NT A+ + C + R ++TP +V+ + A + +ALAK + RL
Sbjct: 380 -NTAAQKV-CHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERL 437
Query: 343 FDWLVDKINSSIGQDP-NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVF 401
F W++ ++N ++ + + +G+LDI GFE F++NSFEQ CIN+TNEKLQQ FN +F
Sbjct: 438 FRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMF 497
Query: 402 KMEQEEYTKEEINWSYIEF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFAQK 458
+EQEEY +E I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +K
Sbjct: 498 ILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEK 557
Query: 459 LYQTFKSNKRFIKPKL--SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKC 516
L Q ++ +F K K +T F I HYAG+VTY A +L KN D + LL S
Sbjct: 558 LIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSD 617
Query: 517 PFVSG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTE 558
FV+ +G +K QL LM TL +T
Sbjct: 618 KFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTN 677
Query: 559 PHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLA 618
P+++RC+ PN+ R + +++QLRC GVLE IRI G+P R F EF R+ +LA
Sbjct: 678 PNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILA 737
Query: 619 PDVL-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARR 665
+ + G D K AC ++ + L Y+IG++K+F R G +A L+ R
Sbjct: 738 ANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEER 787
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 473 bits (1216), Expect = e-133, Method: Compositional matrix adjust.
Identities = 275/702 (39%), Positives = 406/702 (57%), Gaps = 47/702 (6%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M +L+ L+E VLHNL RY IYTY+G + INP+++LP +Y ++E Y+G +
Sbjct: 65 MAELTCLNEASVLHNLRERYYSGLIYTYSGLFCVVINPYKQLP-IYTEAIVEMYRGKKRH 123
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG----GRS-- 114
E+ PHV+A+ + AYR+M+ + + SIL +GESGAGKTE TK +++YLA++ GR
Sbjct: 124 EVPPHVYAVTEGAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSPKGRKEP 183
Query: 115 GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLE 174
GV G +E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ + FD G I GA + TYLLE
Sbjct: 184 GVPGE-LERQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVAGYIVGANIETYLLE 242
Query: 175 RSRVCQISDPERNYHCFYLLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 234
+SR + + E ++H FY L E + L +P S HY +N + + E +
Sbjct: 243 KSRAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPCS-HYRFLTNGPSSSPGQERELFQ 301
Query: 235 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 294
T ++ ++G S EE ++ R+V+A+L GNI + D + + D NT A+
Sbjct: 302 ETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKRERNTDQATMPD-------NTAAQK 354
Query: 295 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSR-----DALAKTVYSRLFDWLVDK 349
L C L +R ++TP + R A + +ALAK Y RLF WLV +
Sbjct: 355 L-CRLLGLGVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEALAKATYERLFRWLVLR 413
Query: 350 INSSIGQDP-NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEY 408
+N ++ + P + +G+LDI GFE F+LNSFEQ CIN+TNEKLQQ FN +F +EQEEY
Sbjct: 414 LNRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEY 473
Query: 409 TKEEINWSYIEF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFAQKLYQTFKS 465
+E I W++++F +D Q +DLIE+ P G++ALLDE C FPK+T ++F +K+ Q
Sbjct: 474 QREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKATDKSFVEKVAQEQGG 533
Query: 466 NKRFIKPKLSR--TSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPF----- 518
+ +F +P+ R F++ HYAG+V Y A+ +L KN D + LL S
Sbjct: 534 HPKFQRPRHLRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDRLTAEIW 593
Query: 519 -----------VSGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKP 567
VS +G +K L LM TL++T P ++RC+ P
Sbjct: 594 KDVEGIVGLEQVSSLGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNPSFVRCIVP 653
Query: 568 NNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNY 626
N+ R E ++ QLRC GVLE IRI G+P R F EF R+ +L P+ + G
Sbjct: 654 NHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRILFQEFRQRYEILTPNAIPKGFM 713
Query: 627 DDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRA 666
D K ACEK++ + L Y++G++K+F RAG +A+L+ RA
Sbjct: 714 DGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEERA 755
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 471 bits (1211), Expect = e-132, Method: Compositional matrix adjust.
Identities = 269/699 (38%), Positives = 408/699 (58%), Gaps = 37/699 (5%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M L++LHEP VL+NL RY IYTY+G + +NP++ LP +Y ++ Y+G +
Sbjct: 90 MAMLTFLHEPAVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLP-VYTPEVVAAYRGKKRS 148
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRY---LAYLGGRSGVE 117
E PH+F+I+D AY+ M+ + ++ SIL++GESGAGKT TK +++Y +A +G RS +
Sbjct: 149 EAPPHIFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKD 208
Query: 118 ---GR-TVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLL 173
G+ T+E Q++++NP LEAFGNAKTVRN+NSSRFGKF+ + F G+++ A + TYLL
Sbjct: 209 QSPGKGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLL 268
Query: 174 ERSRVCQISDPERNYHCFY-LLCAAPPEVREKFKL-GDPKSFHYLNQSNCYALDGVDDTE 231
E+SRV ER+YH FY +L PE+ + + +P + +++Q + +DD E
Sbjct: 269 EKSRVIFQLKAERDYHIFYQILSNKKPELLDMLLITNNPYDYAFISQGET-TVASIDDAE 327
Query: 232 EYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFA-KGEEADSSVIKDEKSRFHLNT 290
E +AT A D++G + EE+++++++ AI+H GN++F K E + E++ +
Sbjct: 328 ELMATDNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLKQREEQAEPDGTEEA----DK 383
Query: 291 TAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKI 350
+A L+ ++ L L + + E +T+ + + + ALAK VY R+F+W+V +I
Sbjct: 384 SAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRI 443
Query: 351 NSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTK 410
N+++ + IGVLDI GFE F NSFEQ CINFTNEKLQQ FN H+F +EQEEY K
Sbjct: 444 NATLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKK 503
Query: 411 EEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT-FKSNKR 468
E I W++I+F +D Q +DLIE KP GI+++L+E CMFPK+T TF KL+ +
Sbjct: 504 EGIEWTFIDFGMDLQACIDLIE-KPMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSAN 562
Query: 469 FIKPK----LSRTSFTISHYAGEVTYLADLFLDKNKD----YVVAEHQ----VLLTASKC 516
F KP+ F++ HYAG V Y +L KNKD VV +Q LL+
Sbjct: 563 FQKPRNIKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFA 622
Query: 517 PFVSGXX--XXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPA 574
+ + + + L LM L ST PH++RC+ PN P
Sbjct: 623 NYAGADAPIEKGKGKAKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPG 682
Query: 575 IFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNY-DDKVAC 632
+ +N ++ QLRC GVLE IRI G+P R + +F R+ +L P + +G + D +
Sbjct: 683 VMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGA 742
Query: 633 EKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVL 669
EK+L + + Y+ G TKVF +AG + L+ R E L
Sbjct: 743 EKLLSSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERL 781
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 466 bits (1200), Expect = e-131, Method: Compositional matrix adjust.
Identities = 262/671 (39%), Positives = 395/671 (58%), Gaps = 26/671 (3%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
L+ + E + NL R++ + IYTY G+++I+ NPF+ L ++Y ++ Y G E+
Sbjct: 16 LNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNL-NIYKESDIKAYNGRYKYEMP 74
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQ 123
PH++A+A+ AYR+M ++ +++SGESGAGKTE +K +M++L ++ G + +
Sbjct: 75 PHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSPNGERISK 134
Query: 124 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISD 183
+L+SNP+LEAFGNAKT+RN+NSSRFGK++E+QF+ G G + YLLE+SRV +
Sbjct: 135 MLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQ 194
Query: 184 PERNYHCFYLLCAAPPEVREKFKLG---DPKSFHYLNQSNCYALDGVDDTEEYLATRRAM 240
ER++H FY + + + +LG + ++ YL +S C+ + +DD+ E+ +AM
Sbjct: 195 GERSFHIFYQMLKGLSQSKLD-ELGLTPNAPAYEYLKKSGCFDVSTIDDSGEFKIIVKAM 253
Query: 241 DIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSV----IKDEKSRFHLNTTAELLK 296
+ +G+ E +Q++I+R++AAILH+GNI FA+ E + + D KS L A LK
Sbjct: 254 ETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKS---LAAAASCLK 310
Query: 297 CDAKSLEDALINRVMVTPE----EVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINS 352
D +SL AL R + T EVI+ +D A SRDALAK +Y RLF+WLV KIN+
Sbjct: 311 TDQQSLSIALCYRSISTGVGKRCEVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINT 370
Query: 353 SIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEE 412
I +IG+LDIYGFE F+ NSFEQ INF NEKLQQ F + K EQEEY +E
Sbjct: 371 IINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREG 430
Query: 413 INWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKP 472
I W IE+ +N+ + +LIEKKP G+I+LLDEAC+ KST +TF + + F+ N
Sbjct: 431 IEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHLQSY 490
Query: 473 KLSR------TSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXX 526
+S+ T F + HYAG+VTY FLDKNKD + + + +S P V G
Sbjct: 491 VVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLFPPT 550
Query: 527 XXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLR 586
GS+F+ + +L+ TL + PHY+RC+K N+ + + + + Q+R
Sbjct: 551 RPEDSKKRPETA-GSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVR 609
Query: 587 CGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDG-NYDDKVACEKILDKMGLKGYQ 645
G+LE +R+ AG+ R + F +R+ +L N K A E IL + + +
Sbjct: 610 YLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQQHNIDKEE 669
Query: 646 I--GKTKVFLR 654
I GKTKVF+R
Sbjct: 670 IRMGKTKVFIR 680
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 261/671 (38%), Positives = 394/671 (58%), Gaps = 26/671 (3%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
L+ + E + NL R++ + IYTY G+++I+ NPF+ L ++Y ++ Y G E+
Sbjct: 16 LNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNL-NIYKESDIKAYNGRYKYEMP 74
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQ 123
PH++A+A+ AYR+M ++ +++SGESGAGKTE +K +M++L ++ G + +
Sbjct: 75 PHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSPNGERISK 134
Query: 124 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISD 183
+L+SNP+LEAFGNAKT+RN+NSSRFGK++E+QF+ G G + YLLE+SRV +
Sbjct: 135 MLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQ 194
Query: 184 PERNYHCFYLLCAAPPEVREKFKLG---DPKSFHYLNQSNCYALDGVDDTEEYLATRRAM 240
ER++H FY + + + +LG + ++ YL +S C+ + +DD+ E+ +AM
Sbjct: 195 GERSFHIFYQMLKGLSQSKLD-ELGLTPNAPAYEYLKKSGCFDVSTIDDSGEFKIIVKAM 253
Query: 241 DIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSV----IKDEKSRFHLNTTAELLK 296
+ +G+ E +Q++I+R++AAILH+GNI FA+ E + + D KS L A LK
Sbjct: 254 ETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKS---LAAAASCLK 310
Query: 297 CDAKSLEDALINRVMVTPE----EVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINS 352
D +SL AL R + T VI+ +D A SRDALAK +Y RLF+WLV KIN+
Sbjct: 311 TDQQSLSIALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINT 370
Query: 353 SIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEE 412
I +IG+LDIYGFE F+ NSFEQ INF NEKLQQ F + K EQEEY +E
Sbjct: 371 IINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREG 430
Query: 413 INWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKP 472
I W IE+ +N+ + +LIEKKP G+I+LLDEAC+ KST +TF + + F+ N
Sbjct: 431 IEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHLQSY 490
Query: 473 KLSR------TSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXX 526
+S+ T F + HYAG+VTY FLDKNKD + + + +S P V G
Sbjct: 491 VVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLFPPT 550
Query: 527 XXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLR 586
GS+F+ + +L+ TL + PHY+RC+K N+ + + + + Q+R
Sbjct: 551 RPEDSKKRPETA-GSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVR 609
Query: 587 CGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDG-NYDDKVACEKILDKMGLKGYQ 645
G+LE +R+ AG+ R + F +R+ +L N K A E IL + + +
Sbjct: 610 YLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQQHNIDKEE 669
Query: 646 I--GKTKVFLR 654
I GKTKVF+R
Sbjct: 670 IRMGKTKVFIR 680
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 268/739 (36%), Positives = 401/739 (54%), Gaps = 48/739 (6%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M +++LHEP VL+NL RY IYTY+G + +NP+ LP +Y+ ++ Y+G +
Sbjct: 91 MAMMTHLHEPAVLYNLXERYAAWMIYTYSGLFCVTVNPYXWLP-VYNPXVVLAYRGKKRQ 149
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG-------- 112
E PH+F+I+D AY+ M+ + ++ SIL++GESGAGKT T +++Y A +
Sbjct: 150 EAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKKEE 209
Query: 113 RSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYL 172
+SG T+E Q++ +NP+LEAFGNA TVRN+NSSRFG F+ + F G+++ A + TYL
Sbjct: 210 QSGKMQGTLEDQIISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYL 269
Query: 173 LERSRVCQISDPERNYHCFY-LLCAAPPEVREKFKLG-DPKSFHYLNQSNCYALDGVDDT 230
LE SRV ER+YH FY ++ PE+ + + +P +HY+++ + +DD
Sbjct: 270 LEXSRVTFQLPAERSYHIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSIDDQ 328
Query: 231 EEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGE-----EADSSVIKDEKSR 285
EE +AT A+DI+G S +E AI+ + A++H GN++F + + E D + + D +
Sbjct: 329 EELMATDSAIDILGFSADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAY 388
Query: 286 FHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDW 345
+AELLK A + VT E ++ + V A LA VY +F W
Sbjct: 389 LMGLNSAELLK--ALCYPRVGVGNEAVTXGETVSEVHNSVGA------LAXAVYEXMFLW 440
Query: 346 LVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQ 405
+V +IN + + IGVLDI GFE F NSFEQ CINFTNE LQQ FN H+F +EQ
Sbjct: 441 MVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQ 500
Query: 406 EEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLY-QTF 463
EEY E I W +I+F +D ++LIE P GI ++L+E CMFPK+T +F LY +
Sbjct: 501 EEYXXEGIEWEFIDFGMDLAACIELIE-XPMGIFSILEEECMFPKATDTSFXNXLYDEHL 559
Query: 464 KSNKRFIKPKLSR----TSFTISHYAGEVTYLADLFLDKNKD----YVVAEHQ------V 509
+ F KPK ++ F++ HYAG V Y +L+ N D V+ +Q +
Sbjct: 560 GKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSVXTL 619
Query: 510 LLTASKCPFVSGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNN 569
L + + + + F+ L LM L ST PH++RC+ PN
Sbjct: 620 ALLFATYGGEAEGGGGKKGGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCIIPNE 679
Query: 570 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVL-APDVLDGNY-D 627
P E+ ++ QLRC GVLE IRI G+P+R + +F R+ VL A + +G + D
Sbjct: 680 TXTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMD 739
Query: 628 DKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIA 685
K A EK+L + Y G T VF AG + L+ R + L Q + R ++
Sbjct: 740 SKKASEKLLGGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIITATQARCRGFLM 799
Query: 686 RKEFIAL--RKAAIVLQSY 702
R E+ A+ R+ +I Y
Sbjct: 800 RVEYRAMVERRESIFCIQY 818
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 268/739 (36%), Positives = 401/739 (54%), Gaps = 48/739 (6%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M +++LHEP VL+NL RY IYTY+G + +NP+ LP +Y+ ++ Y+G +
Sbjct: 88 MAMMTHLHEPAVLYNLXERYAAWMIYTYSGLFCVTVNPYXWLP-VYNPXVVLAYRGKKRQ 146
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG-------- 112
E PH+F+I+D AY+ M+ + ++ SIL++GESGAGKT T +++Y A +
Sbjct: 147 EAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKKEE 206
Query: 113 RSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYL 172
+SG T+E Q++ +NP+LEAFGNA TVRN+NSSRFG F+ + F G+++ A + TYL
Sbjct: 207 QSGKMQGTLEDQIISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYL 266
Query: 173 LERSRVCQISDPERNYHCFY-LLCAAPPEVREKFKLG-DPKSFHYLNQSNCYALDGVDDT 230
LE SRV ER+YH FY ++ PE+ + + +P +HY+++ + +DD
Sbjct: 267 LEXSRVTFQLPAERSYHIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSIDDQ 325
Query: 231 EEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGE-----EADSSVIKDEKSR 285
EE +AT A+DI+G S +E AI+ + A++H GN++F + + E D + + D +
Sbjct: 326 EELMATDSAIDILGFSADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAY 385
Query: 286 FHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDW 345
+AELLK A + VT E ++ + V A LA VY +F W
Sbjct: 386 LMGLNSAELLK--ALCYPRVGVGNEAVTXGETVSEVHNSVGA------LAXAVYEXMFLW 437
Query: 346 LVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQ 405
+V +IN + + IGVLDI GFE F NSFEQ CINFTNE LQQ FN H+F +EQ
Sbjct: 438 MVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQ 497
Query: 406 EEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLY-QTF 463
EEY E I W +I+F +D ++LIE P GI ++L+E CMFPK+T +F LY +
Sbjct: 498 EEYXXEGIEWEFIDFGMDLAACIELIE-XPMGIFSILEEECMFPKATDTSFXNXLYDEHL 556
Query: 464 KSNKRFIKPKLSR----TSFTISHYAGEVTYLADLFLDKNKD----YVVAEHQ------V 509
+ F KPK ++ F++ HYAG V Y +L+ N D V+ +Q +
Sbjct: 557 GKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSVXTL 616
Query: 510 LLTASKCPFVSGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNN 569
L + + + + F+ L LM L ST PH++RC+ PN
Sbjct: 617 ALLFATYGGEAEGGGGKKGGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCIIPNE 676
Query: 570 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVL-APDVLDGNY-D 627
P E+ ++ QLRC GVLE IRI G+P+R + +F R+ VL A + +G + D
Sbjct: 677 TXTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMD 736
Query: 628 DKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIA 685
K A EK+L + Y G T VF AG + L+ R + L Q + R ++
Sbjct: 737 SKKASEKLLGGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIITATQARCRGFLM 796
Query: 686 RKEFIAL--RKAAIVLQSY 702
R E+ A+ R+ +I Y
Sbjct: 797 RVEYRAMVERRESIFCIQY 815
>pdb|2F6H|X Chain X, Myosin V Cargo Binding Domain
Length = 419
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 1259 IVKSLNSYLKTMKVNYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGL 1318
I+ NS MK ++ + V T + ++++ FN L+++R S+ G + +
Sbjct: 207 ILTFFNSIYWCMKSFHIENEVFHAVVTTLLNYVDAICFNELIMKRNFLSWKRGLQLNYNV 266
Query: 1319 AELEQWC-----YDATEEYAGSAWDELKHIRQAVGFLVINQKPKKTLNEITKELCPVLSI 1373
LE+WC D TE L+H+ Q L + + + + +I + +C L+
Sbjct: 267 TRLEEWCKTHGLTDGTE--------CLQHLIQTAKLLQVRKYTIEDI-DILRGICYSLTP 317
Query: 1374 QQLYRISTMY 1383
QL ++ + Y
Sbjct: 318 AQLQKLISQY 327
>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 58
Score = 37.0 bits (84), Expect = 0.080, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 666 AEVLGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLRREAAA 721
A+ L A IQ+ IR ++ RK ++ +++AAI +Q Y RG A + LRR AA
Sbjct: 1 ADKLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAA 56
>pdb|3I99|A Chain A, The Crystal Structure Of The
Udp-N-Acetylenolpyruvoylglucosamine Reductase From The
Vibrio Cholerae O1 Biovar Tor
Length = 357
Score = 34.7 bits (78), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 629 KVACEKILDKMGLKGYQIGKTKVFLRAGQMA--ELDARRAEVLGNAARIIQRQIRTY 683
KVA ++D+ GLKG+QIG KV + + DA +VL AA I QR Y
Sbjct: 274 KVAAGWLIDQAGLKGHQIGGAKVHPKQALVIVNTGDASAQDVLXLAADIQQRVFNCY 330
>pdb|1P8J|A Chain A, Crystal Structure Of The Proprotein Convertase Furin
pdb|1P8J|B Chain B, Crystal Structure Of The Proprotein Convertase Furin
pdb|1P8J|C Chain C, Crystal Structure Of The Proprotein Convertase Furin
pdb|1P8J|D Chain D, Crystal Structure Of The Proprotein Convertase Furin
pdb|1P8J|E Chain E, Crystal Structure Of The Proprotein Convertase Furin
pdb|1P8J|F Chain F, Crystal Structure Of The Proprotein Convertase Furin
pdb|1P8J|G Chain G, Crystal Structure Of The Proprotein Convertase Furin
pdb|1P8J|H Chain H, Crystal Structure Of The Proprotein Convertase Furin
Length = 471
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 1046 NEKQQENQDLLIKCVSQNLGFSRSKPVAASVIYKCL-----LHWRSFE 1088
NEKQ DL KC + G S S P+AA +I L L WR +
Sbjct: 240 NEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQ 287
>pdb|3DZD|A Chain A, Crystal Structure Of Sigma54 Activator Ntrc4 In The
Inactive State
pdb|3DZD|B Chain B, Crystal Structure Of Sigma54 Activator Ntrc4 In The
Inactive State
Length = 368
Score = 31.2 bits (69), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 86 ILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAK 139
+L++GESG GK +++ RY G + ++ Q++ ES E FG+ K
Sbjct: 155 VLITGESGTGKEIVARLIHRYSGRKGAFVDLNCASIPQELAES----ELFGHEK 204
>pdb|2WZM|A Chain A, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase
In Its Apo And Liganded Form
pdb|2WZM|B Chain B, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase
In Its Apo And Liganded Form
pdb|2WZT|A Chain A, Crystal Structure Of A Mycobacterium Aldo-keto Reductase
In Its Apo And Liganded Form
pdb|2WZT|B Chain B, Crystal Structure Of A Mycobacterium Aldo-keto Reductase
In Its Apo And Liganded Form
Length = 283
Score = 30.8 bits (68), Expect = 5.2, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 318 ITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFE 373
+ R LD A +A +T L W + N I + N I LD++GFE
Sbjct: 200 VGRLLDHPAVTAIAEAHGRTAAQVLLRWSIQLGNVVISRSANPERIASNLDVFGFE 255
>pdb|4F4C|A Chain A, The Crystal Structure Of The Multi-Drug Transporter
Length = 1321
Score = 30.0 bits (66), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 78 INEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLE 127
+N G++ +++ G SG GK+ +L+RY L G+ ++G V LE
Sbjct: 441 VNAGQTVALV--GSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLE 488
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,363,618
Number of Sequences: 62578
Number of extensions: 1436736
Number of successful extensions: 4787
Number of sequences better than 100.0: 115
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 4096
Number of HSP's gapped (non-prelim): 193
length of query: 1464
length of database: 14,973,337
effective HSP length: 111
effective length of query: 1353
effective length of database: 8,027,179
effective search space: 10860773187
effective search space used: 10860773187
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)