BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000489
(1463 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 583 bits (1504), Expect = e-166, Method: Compositional matrix adjust.
Identities = 352/952 (36%), Positives = 520/952 (54%), Gaps = 104/952 (10%)
Query: 5 KGSKVWVEDKDLAWVAAEVVSD--SVGRHVQVLTATGKKV--LAAPERVFLRATDDDEEH 60
K ++VW+ D + W +AE++ D + +Q+ GK + P+ L + +
Sbjct: 9 KYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDIL 68
Query: 61 GGVDDMTKLTYLNEPGVLYNLERRYALND-IYTYTGSILIAVNPFTKLPHLYNVHMMEQY 119
G +D+T L+YL+EP VL+NL+ R+ + IYTY G +L+A+NP+ +LP +Y ++ Y
Sbjct: 69 VGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINAY 127
Query: 120 KGAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRA 179
G G++ PH+FAVA+ +Y+ M + ++QSI+VSGESGAGKT + K M+Y V G A
Sbjct: 128 SGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSA 187
Query: 180 AGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLE 239
+ + NVE++VL SNP++E+ GNA+T RNDNSSRFGK++EI FD RI GA +RTYLLE
Sbjct: 188 S--EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLE 245
Query: 240 RSRVVQITDPERNYHCFYQLCASGRDAE--KYKLDHPSHFHYLNQSKVYELDGVSSAEEY 297
+SRVV + ERNYH FYQLCAS E +L + ++FHY Q +DG+ A+E
Sbjct: 246 KSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEM 305
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
+ T++A ++GIS Q IFR LA ILHLGN+EF+ ++ DS I + L + D
Sbjct: 306 VNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPPKHDP--LTIFCD 362
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
L D + LC R + T + IK + A+ +RDALAK +Y+ LF+W+V+ +N++
Sbjct: 363 LMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKA 422
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ + IGVLDIYGFE+F+ NSFEQFCIN+ANEKLQQ FN HVFK+EQEEY +E+I
Sbjct: 423 LHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQI 482
Query: 478 NWSYIEFIDNQ----------DVLDLIE-------------------------------- 495
W+ I+F DNQ VLDL++
Sbjct: 483 PWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPR 542
Query: 496 -------------KVTYQTNTFLDKNRDYVVVEHCNLLSSSK-CPFVAGLF--------- 532
KV YQ FL+KN+D V E +L SSK + LF
Sbjct: 543 LSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISP 602
Query: 533 -----------------PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
P + L LMETLN+T PHY+RC+
Sbjct: 603 TSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCI 662
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
KPN P F+ + QLR GVLE +RIS AG+P+R TY +F R+ +L ++ D
Sbjct: 663 KPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVL-MKQKDVL 721
Query: 636 YEEKALTEKILRKLKLEN--FQLGRTKVFLRAGQIGILDSRRAEVLDSAARCIQHRWRTF 693
+ K + +L KL L+ +Q G+TK+F RAGQ+ L+ RA+ L +A IQ R +
Sbjct: 722 SDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGW 781
Query: 694 IAHRNFVSIRAAAFVLQAQCRGCLARKLYGVKRETAAAISLQKYVRRWLSRHAFLKLSLA 753
+ + ++ +R AA +Q RG AR R T AAI +QK+ R ++ R + + A
Sbjct: 782 LMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDA 841
Query: 754 AIVIQSNIRGFSIRERFLHRKRHKAATVIQACWRMCKFRSAFQHHQTSIIAIQCRWRQKL 813
I +Q+ +RG+ +R ++ R + +IQ R R + +I+ +QC +R+ +
Sbjct: 842 TIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMM 901
Query: 814 AKRELRRLKQVANEAGALRLAKNKLERQLEDLTWRVQLEKKLRVSTEEAKSV 865
AKREL++LK A + LE ++ +QL++K+ +E KS+
Sbjct: 902 AKRELKKLKIEARSVERYKKLHIGLENKI------MQLQRKIDEQNKEYKSL 947
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 522 bits (1344), Expect = e-148, Method: Compositional matrix adjust.
Identities = 305/790 (38%), Positives = 439/790 (55%), Gaps = 98/790 (12%)
Query: 5 KGSKVWVEDKDLAWVAAEVVSD--SVGRHVQVLTATGKKV--LAAPERVFLRATDDDEEH 60
K ++VW+ D + W +AE++ D + +Q+ GK + P+ L + +
Sbjct: 9 KYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDIL 68
Query: 61 GGVDDMTKLTYLNEPGVLYNLERRYALND-IYTYTGSILIAVNPFTKLPHLYNVHMMEQY 119
G +D+T L+YL+EP VL+NL+ R+ + IYTY G +L+A+NP+ +LP +Y ++ Y
Sbjct: 69 VGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINAY 127
Query: 120 KGAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRA 179
G G++ PH+FAVA+ +Y+ M + ++QSI+VSGESGAGKT + K M+Y V G A
Sbjct: 128 SGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSA 187
Query: 180 AGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLE 239
+ + NVE++VL SNP++E+ GNA+T RNDNSSRFGK++EI FD RI GA +RTYLLE
Sbjct: 188 S--EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLE 245
Query: 240 RSRVVQITDPERNYHCFYQLCASGRDAE--KYKLDHPSHFHYLNQSKVYELDGVSSAEEY 297
+SRVV + ERNYH FYQLCAS E +L + ++FHY Q +DG+ A+E
Sbjct: 246 KSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEM 305
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
+ T++A ++GIS Q IFR LA ILHLGN+EF+ ++ DS I + L + D
Sbjct: 306 VNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPPKHDP--LTIFCD 362
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
L D + LC R + T + IK + A+ +RDALAK +Y+ LF+W+V+ +N++
Sbjct: 363 LMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKA 422
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ + IGVLDIYGFE+F+ NSFEQFCIN+ANEKLQQ FN HVFK+EQEEY +E+I
Sbjct: 423 LHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQI 482
Query: 478 NWSYIEFIDNQ----------DVLDLIE-------------------------------- 495
W+ I+F DNQ VLDL++
Sbjct: 483 PWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPR 542
Query: 496 -------------KVTYQTNTFLDKNRDYVVVEHCNLLSSSK-CPFVAGLF--------- 532
KV YQ FL+KN+D V E +L SSK + LF
Sbjct: 543 LSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISP 602
Query: 533 -----------------PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
P + L LMETLN+T PHY+RC+
Sbjct: 603 TSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCI 662
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
KPN P F+ + QLR GVLE +RIS AG+P+R TY +F R+ +L ++ D
Sbjct: 663 KPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVL-MKQKDVL 721
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRRAEVLDSAARCIQHRWRTF 693
+ K + +L KL L + +Q G+TK+F RAGQ+ L+ RA+ L +A IQ R +
Sbjct: 722 SDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGW 781
Query: 694 IAHRNFVSIR 703
+ + ++ +R
Sbjct: 782 LMRKKYMRMR 791
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 513 bits (1320), Expect = e-145, Method: Compositional matrix adjust.
Identities = 299/764 (39%), Positives = 426/764 (55%), Gaps = 98/764 (12%)
Query: 5 KGSKVWVEDKDLAWVAAEVVSD--SVGRHVQVLTATGKKV--LAAPERVFLRATDDDEEH 60
K ++VW+ D + W +AE++ D + +Q+ GK + P+ L + +
Sbjct: 9 KYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDIL 68
Query: 61 GGVDDMTKLTYLNEPGVLYNLERRYALND-IYTYTGSILIAVNPFTKLPHLYNVHMMEQY 119
G +D+T L+YL+EP VL+NL+ R+ + IYTY G +L+A+NP+ +LP +Y ++ Y
Sbjct: 69 VGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINAY 127
Query: 120 KGAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRA 179
G G++ PH+FAVA+ +Y+ M + ++QSI+VSGESGAGKT + K M+Y V G A
Sbjct: 128 SGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSA 187
Query: 180 AGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLE 239
+ + NVE++VL SNP++E+ GNA+T RNDNSSRFGK++EI FD RI GA +RTYLLE
Sbjct: 188 S--EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLE 245
Query: 240 RSRVVQITDPERNYHCFYQLCASGRDAE--KYKLDHPSHFHYLNQSKVYELDGVSSAEEY 297
+SRVV + ERNYH FYQLCAS E +L + ++FHY Q +DG+ A+E
Sbjct: 246 KSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEM 305
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
+ T++A ++GIS Q IFR LA ILHLGN+EF+ ++ DS I + L + D
Sbjct: 306 VNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPPKHDP--LTIFCD 362
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
L D + LC R + T + IK + A+ +RDALAK +Y+ LF+W+V+ +N++
Sbjct: 363 LMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKA 422
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ + IGVLDIYGFE+F+ NSFEQFCIN+ANEKLQQ FN HVFK+EQEEY +E+I
Sbjct: 423 LHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQI 482
Query: 478 NWSYIEFIDNQ----------DVLDLIE-------------------------------- 495
W+ I+F DNQ VLDL++
Sbjct: 483 PWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPR 542
Query: 496 -------------KVTYQTNTFLDKNRDYVVVEHCNLLSSSK-CPFVAGLF--------- 532
KV YQ FL+KN+D V E +L SSK + LF
Sbjct: 543 LSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISP 602
Query: 533 -----------------PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
P + L LMETLN+T PHY+RC+
Sbjct: 603 TSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCI 662
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
KPN P F+ + QLR GVLE +RIS AG+P+R TY +F R+ +L ++ D
Sbjct: 663 KPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVL-MKQKDVL 721
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRRAE 677
+ K + +L KL L + +Q G+TK+F RAGQ+ L+ RA+
Sbjct: 722 SDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRAD 765
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/439 (51%), Positives = 317/439 (72%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 265 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 323
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 324 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 379
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 380 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 439
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDIYGFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 440 LCQERKAYF-IGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 498
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 499 NWTFIDFGLDSQATIDLID 517
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 28/217 (12%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 492 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 547
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 548 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 596
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 597 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 655
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYP 612
PN+ P K E+ +L QLRC GVLE +RI+ G+P
Sbjct: 656 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFP 692
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/439 (51%), Positives = 317/439 (72%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 324
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 380
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 381 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 440
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDIYGFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 441 LCQERKAYF-IGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 499
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 500 NWTFIDFGLDSQATIDLID 518
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 493 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 548
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 549 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 597
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 598 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 656
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 657 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 716
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E F+ G TK+F RAGQ+ ++ R
Sbjct: 717 EDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/439 (51%), Positives = 317/439 (72%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 324
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 380
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 381 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 440
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDIYGFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 441 LCQERKAYF-IGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 499
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 500 NWTFIDFGLDSQATIDLID 518
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 493 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 548
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 549 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 597
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 598 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 656
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 657 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 716
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R
Sbjct: 717 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 316/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 265 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 323
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 324 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 379
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 380 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 439
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 440 LCQERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 498
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 499 NWTFIDFGLDSQATIDLID 517
Score = 113 bits (282), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 135/282 (47%), Gaps = 30/282 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 492 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 547
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 548 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 596
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 597 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 655
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC VLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 656 IPNNKQLPAKLEDKVVLDQLRCNVVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 715
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R
Sbjct: 716 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 757
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 316/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 277 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 335
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 336 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 391
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 392 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 451
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 452 LCQERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 510
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 511 NWTFIDFGLDSQATIDLID 529
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 137/284 (48%), Gaps = 30/284 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 504 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 559
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 560 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 608
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 609 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 667
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 668 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 727
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRRAE 677
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R +
Sbjct: 728 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQ 771
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 316/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 277 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 335
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 336 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 391
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 392 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 451
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 452 LCQERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 510
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 511 NWTFIDFGLDSQATIDLID 529
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 137/284 (48%), Gaps = 30/284 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 504 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 559
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 560 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 608
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 609 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 667
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 668 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 727
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRRAE 677
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R +
Sbjct: 728 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQ 771
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 316/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 265 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 323
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 324 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 379
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 380 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 439
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 440 LCQERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 498
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 499 NWTFIDFGLDSQATIDLID 517
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 135/282 (47%), Gaps = 30/282 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 492 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 547
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 548 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 596
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 597 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 655
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC VLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 656 IPNNKQLPAKLEDKVVLDQLRCNAVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 715
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R
Sbjct: 716 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 757
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 316/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 324
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 380
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 381 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 440
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 441 LCQERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 499
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 500 NWTFIDFGLDSQATIDLID 518
Score = 117 bits (292), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 493 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 548
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 549 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 597
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 598 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 656
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 657 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 716
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R
Sbjct: 717 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 316/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 265 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 323
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 324 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 379
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 380 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 439
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 440 LCQERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 498
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 499 NWTFIDFGLDSQATIDLID 517
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 140/288 (48%), Gaps = 30/288 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 492 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 547
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 548 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 596
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 597 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 655
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 656 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 715
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRRAEVLDS 681
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R + L+S
Sbjct: 716 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRLES 763
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 315/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 324
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 380
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 381 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 440
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 441 LCQERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 499
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 500 NWTFIDFGLDSQATIDLID 518
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 493 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 548
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 549 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 597
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 598 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 656
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 657 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 716
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E F+ G TK+F RAGQ+ ++ R
Sbjct: 717 EDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 315/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 324
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 380
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 381 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 440
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 441 LCQERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 499
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 500 NWTFIDFGLDSQATIDLID 518
Score = 117 bits (292), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 493 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 548
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 549 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 597
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 598 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 656
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 657 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 716
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R
Sbjct: 717 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 316/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 324
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 380
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 381 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 440
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 441 LCQERKAYF-IGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 499
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 500 NWTFIDFGLDSQATIDLID 518
Score = 116 bits (291), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 493 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 548
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 549 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 597
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 598 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 656
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 657 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 716
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R
Sbjct: 717 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 316/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 277 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 335
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 336 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 391
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 392 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 451
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 452 LCQERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 510
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 511 NWTFIDFGLDSQATIDLID 529
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 140/288 (48%), Gaps = 30/288 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 504 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 559
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 560 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 608
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 609 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 667
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 668 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 727
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRRAEVLDS 681
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R + L+S
Sbjct: 728 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRLES 775
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 315/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 324
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 380
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 381 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 440
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 441 LCQERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKI 499
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 500 NWTFIDFGLDSQATIDLID 518
Score = 117 bits (292), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 493 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 548
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 549 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 597
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 598 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 656
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 657 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 716
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R
Sbjct: 717 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 316/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 277 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 335
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 336 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 391
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 392 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 451
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 452 LCQERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 510
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 511 NWTFIDFGLDSQATIDLID 529
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 140/288 (48%), Gaps = 30/288 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 504 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 559
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 560 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 608
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 609 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 667
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 668 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 727
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRRAEVLDS 681
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R + L+S
Sbjct: 728 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRLES 775
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/439 (51%), Positives = 316/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+N+SRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNASRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 324
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 380
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 381 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 440
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 441 LCQERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 499
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 500 NWTFIDFGLDSQATIDLID 518
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 493 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 548
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 549 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 597
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 598 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 656
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 657 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 716
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R
Sbjct: 717 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/439 (51%), Positives = 316/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 324
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 380
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 381 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 440
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ ++ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 441 LCEERKAYF-IGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 499
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 500 NWTFIDFGLDSQATIDLID 518
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 493 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 548
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 549 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 597
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 598 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 656
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 657 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 716
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E F+ G TK+F RAGQ+ ++ R
Sbjct: 717 EDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 314/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF +P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKIIP-IYTQEMVDIFKG 144
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 265 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 323
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 324 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 379
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV KIN
Sbjct: 380 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNV 439
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 440 LCQERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 498
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 499 NWTFIDFGLDSQATIDLID 517
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 492 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 547
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 548 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 596
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 597 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 655
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTR 614
PN+ P K E+ +L QLRC GVLE +RI+ G+P R
Sbjct: 656 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNR 694
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 314/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF +P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKIIP-IYTQEMVDIFKG 144
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF++ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +EE+
Sbjct: 265 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEF 323
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 324 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 379
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV KIN
Sbjct: 380 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNV 439
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q+ + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 440 LCQERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKI 498
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 499 NWTFIDFGLDSQATIDLID 517
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 140/288 (48%), Gaps = 30/288 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 492 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 547
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 548 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 596
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 597 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 655
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 656 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 715
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRRAEVLDS 681
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R + L+S
Sbjct: 716 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRLES 763
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/439 (50%), Positives = 312/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSS FGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEF 324
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 380
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 381 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 440
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ + + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 441 LCSERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKI 499
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 500 NWTFIDFGLDSQATIDLID 518
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 139/288 (48%), Gaps = 30/288 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 493 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 548
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 549 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 597
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 598 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 656
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 657 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 716
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRRAEVLDS 681
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R + L S
Sbjct: 717 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRLGS 764
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/439 (51%), Positives = 312/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV + ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS EE+
Sbjct: 266 SRVVFQSTTERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEEEF 324
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 380
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 381 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 440
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ + + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 441 LCSERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKI 499
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 500 NWTFIDFGLDSQATIDLID 518
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 135/282 (47%), Gaps = 30/282 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 493 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 548
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 549 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 597
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 598 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 656
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LA ++
Sbjct: 657 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYDLAPNVPRDA 716
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E F+ G TK+F RAGQ+ ++ R
Sbjct: 717 EDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/439 (51%), Positives = 313/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV ++ ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEF 324
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 380
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 381 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 440
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ + + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 441 LCSERAAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKI 499
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 500 NWTFIDFGLDSQATIDLID 518
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 493 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 548
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 549 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 597
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 598 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCI 656
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LLA ++
Sbjct: 657 IPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDA 716
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E ++ G TK+F RAGQ+ ++ R
Sbjct: 717 EDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 437 bits (1123), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/439 (51%), Positives = 312/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV + ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +E+
Sbjct: 266 SRVVFQSTTERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEF 324
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 380
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 381 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 440
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ + + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+I
Sbjct: 441 LCSERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKI 499
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 500 NWTFIDFGLDSQATIDLID 518
Score = 116 bits (291), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 408 DWLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQ 457
++L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 493 EYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLH 548
Query: 458 QHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHC 517
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 549 SHFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLE 597
Query: 518 NLLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCV 575
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 598 LCFKDSSDNVVTKLFNDPNI-ASRAKKGANFLTVAAQYKEQLASLMATLETTNPHFVRCI 656
Query: 576 KPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES 635
PN+ P K E+ +L QLRC GVLEA+RI+ G+P R Y+DFV R+ LA ++
Sbjct: 657 IPNNKQLPAKLEDKVVLDQLRCNGVLEAIRITRKGFPNRIIYADFVKRYYDLAPNVPRDA 716
Query: 636 YEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E F+ G TK+F RAGQ+ ++ R
Sbjct: 717 EDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/439 (50%), Positives = 312/439 (71%), Gaps = 12/439 (2%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 182 DDRNV-EQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ V EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDH---PSHFHYLNQSKVYELDGVSSAEEY 297
SRVV + ERNYH FYQL A G AE+ K H P F+YLNQS ++ GVS +E+
Sbjct: 266 SRVVFQSTSERNYHIFYQLLA-GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEF 324
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ + L A+
Sbjct: 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTA---LNAAST 380
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
+F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN
Sbjct: 381 VFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV 440
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ + + IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQE+Y +E+I
Sbjct: 441 LCSERKAYF-IGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEKYLKEKI 499
Query: 478 NWSYIEF-IDNQDVLDLIE 495
NW++I+F +D+Q +DLI+
Sbjct: 500 NWTFIDFGLDSQATIDLID 518
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 134/281 (47%), Gaps = 30/281 (10%)
Query: 409 WLVEKINRS-VGQDMNSQMQI---------GVLDIYGFESFKHNSFEQFCINFANEKLQQ 458
+L EKIN + + ++SQ I G+L + +S N+ + I KL
Sbjct: 494 YLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLIT----KLHS 549
Query: 459 HFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHCN 518
HF++ K E+ + + E V +V Y+ +L+KN+D + +
Sbjct: 550 HFSKKNAKYEEPRFSKTEFG-----------VTHYAGQVMYEIQDWLEKNKDPLQQDLEL 598
Query: 519 LLSSSKCPFVAGLF--PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCVK 576
S V LF P + K+QL +LM TL +T PH++RC+
Sbjct: 599 CFKDSSDNVVTKLFNDPNI-ASRAKKGANFLTVAAQYKEQLASLMATLETTNPHFVRCII 657
Query: 577 PNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDESY 636
PN+ P K E+ +L QLRC GVLE +RI+ G+P R Y+DFV R+ LA ++
Sbjct: 658 PNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYDLAPNVPRDAE 717
Query: 637 EEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRR 675
+ + T+ +L+ L + E F+ G TK+F RAGQ+ ++ R
Sbjct: 718 DSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 252/681 (37%), Positives = 364/681 (53%), Gaps = 87/681 (12%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV D L + E + NL R+ ++IYTY G ++I+ NPF L ++Y ++ Y G
Sbjct: 9 GVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNL-NIYKESDIKAYNG 67
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E+ PH++A+A+ +YR+M ++Q +++SGESGAGKTE +K IMQ+LTFV +
Sbjct: 68 RYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSP 127
Query: 182 DDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLERS 241
+ + + +L+SNPLLEAFGNA+T+RNDNSSRFGK++E+QF+ G G I YLLE+S
Sbjct: 128 NGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKS 187
Query: 242 RVVQITDPERNYHCFYQLCASGRDAEKYKLD------HPSHFHYLNQSKVYELDGVSSAE 295
RVV T ER++H FYQ+ + + KLD + + YL +S +++ + +
Sbjct: 188 RVVGRTQGERSFHIFYQML---KGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSG 244
Query: 296 EYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSV----IKDQKSSFH 351
E+ +AM+ +G+ DQ +I+R LAAILH+GNI F+ E + + D KS
Sbjct: 245 EFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKS--- 301
Query: 352 LQMAADLFMCDVNLLLATLCTRTIQTREG---SIIKA-LDCNAAVASRDALAKTVYSRLF 407
L AA D L LC R+I T G S+I +DCN A SRDALAK +Y RLF
Sbjct: 302 LAAAASCLKTDQQSLSIALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLF 361
Query: 408 DWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKM 467
+WLV KIN + IG+LDIYGFE F++NSFEQ INF NEKLQQ F E K
Sbjct: 362 NWLVSKINTIINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKS 421
Query: 468 EQEEYRREEINWSYIEFIDNQDVLDLIEK--------------VTYQTN-TFLDK----- 507
EQEEY RE I W IE+ +N+ + +LIEK + T+ TFLD
Sbjct: 422 EQEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQF 481
Query: 508 -----------NRDYVVVEHC---------------------------NLLS---SSKCP 526
++D + + C +L+S SS P
Sbjct: 482 EKNPHLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDP 541
Query: 527 FVAGLFPVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKF 586
V GLFP + + AL+ TL + PHY+RC+K N +
Sbjct: 542 LVQGLFP--PTRPEDSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVI 599
Query: 587 ENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALE-FMDESYEEKALTEKI 645
+ + HQ+R G+LE VR+ AG+ R Y+ F +R+ +L + + + K TE I
Sbjct: 600 DEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELI 659
Query: 646 LRK--LKLENFQLGRTKVFLR 664
L++ + E ++G+TKVF+R
Sbjct: 660 LQQHNIDKEEIRMGKTKVFIR 680
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 251/681 (36%), Positives = 362/681 (53%), Gaps = 87/681 (12%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV D L + E + NL R+ ++IYTY G ++I+ NPF L ++Y ++ Y G
Sbjct: 9 GVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNL-NIYKESDIKAYNG 67
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E+ PH++A+A+ +YR+M ++Q +++SGESGAGKTE +K IMQ+LTFV +
Sbjct: 68 RYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSP 127
Query: 182 DDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLERS 241
+ + + +L+SNPLLEAFGNA+T+RNDNSSRFGK++E+QF+ G G I YLLE+S
Sbjct: 128 NGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKS 187
Query: 242 RVVQITDPERNYHCFYQLCASGRDAEKYKLD------HPSHFHYLNQSKVYELDGVSSAE 295
RVV T ER++H FYQ+ + + KLD + + YL +S +++ + +
Sbjct: 188 RVVGRTQGERSFHIFYQML---KGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSG 244
Query: 296 EYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSV----IKDQKSSFH 351
E+ +AM+ +G+ DQ +I+R LAAILH+GNI F+ E + + D KS
Sbjct: 245 EFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKS--- 301
Query: 352 LQMAADLFMCDVNLLLATLCTRTIQTREGS----IIKALDCNAAVASRDALAKTVYSRLF 407
L AA D L LC R+I T G I +DCN A SRDALAK +Y RLF
Sbjct: 302 LAAAASCLKTDQQSLSIALCYRSISTGVGKRCEVISVPMDCNQAAYSRDALAKALYERLF 361
Query: 408 DWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKM 467
+WLV KIN + IG+LDIYGFE F++NSFEQ INF NEKLQQ F E K
Sbjct: 362 NWLVSKINTIINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKS 421
Query: 468 EQEEYRREEINWSYIEFIDNQDVLDLIEK--------------VTYQTN-TFLDK----- 507
EQEEY RE I W IE+ +N+ + +LIEK + T+ TFLD
Sbjct: 422 EQEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQF 481
Query: 508 -----------NRDYVVVEHC---------------------------NLLS---SSKCP 526
++D + + C +L+S SS P
Sbjct: 482 EKNPHLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDP 541
Query: 527 FVAGLFPVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKF 586
V GLFP + + AL+ TL + PHY+RC+K N +
Sbjct: 542 LVQGLFP--PTRPEDSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVI 599
Query: 587 ENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALE-FMDESYEEKALTEKI 645
+ + HQ+R G+LE VR+ AG+ R Y+ F +R+ +L + + + K TE I
Sbjct: 600 DEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELI 659
Query: 646 LRK--LKLENFQLGRTKVFLR 664
L++ + E ++G+TKVF+R
Sbjct: 660 LQQHNIDKEEIRMGKTKVFIR 680
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/503 (41%), Positives = 305/503 (60%), Gaps = 20/503 (3%)
Query: 3 LRKGSKVWVEDKDLAWVAAEVVS---DSVGRHVQVLTATGKKVLAAPERVFLRATDDDEE 59
+ G VW + +V DS+ ++ L GK LA +VF D ++
Sbjct: 1 MEDGKPVWAPHPTDGFQVGNIVDIGPDSLT--IEPLNQKGKTFLALINQVFPAEEDSKKD 58
Query: 60 HGGVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQY 119
V+D L YLNE +L+N++ RY+ + IYTY +ILIAVNP+ +P +Y+ ++ Y
Sbjct: 59 ---VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSY 115
Query: 120 KGAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRA 179
+G G + PHVFA+AD ++R M SQSI+VSGESGAGKTE TK +++YLT +
Sbjct: 116 QGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ES 171
Query: 180 AGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLE 239
G ++++ +++E+NPLLEAFGNA+TVRN+NSSRFGKFVEI F+ + G + YLLE
Sbjct: 172 YGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLE 231
Query: 240 RSRVVQITDPERNYHCFYQLCASGRDA--EKYKLDHPSHFHYLNQSKVYELDGVSSAEEY 297
+SR+ ERNYH FY+LCA + E+ L P +F YLN+ + + ++
Sbjct: 232 KSRICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDF 291
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
++ AM +G+ E++ +FR +A +LHLGNI+F KS+ L+ A+
Sbjct: 292 IRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAE 351
Query: 358 LFMCDVNLLLATLCTRTIQTR----EGSIIKA-LDCNAAVASRDALAKTVYSRLFDWLVE 412
L D + L +L TR + T +G++IK L A +RDALAKTVYS LFD +V
Sbjct: 352 LLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVN 411
Query: 413 KINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEY 472
++N+ + +S IGVLDI GFE F+HNSFEQFCIN+ NEKLQQ FNE + K EQE Y
Sbjct: 412 RVNQCFPFETSSYF-IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELY 470
Query: 473 RREEINWSYIEFIDNQDVLDLIE 495
++E + + + ++DNQD +DLIE
Sbjct: 471 QKEGLGVNEVHYVDNQDCIDLIE 493
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/500 (42%), Positives = 304/500 (60%), Gaps = 20/500 (4%)
Query: 6 GSKVWVEDKDLAWVAAEVVS---DSVGRHVQVLTATGKKVLAAPERVFLRATDDDEEHGG 62
G VW + +V DS+ ++ L GK LA +VF D ++
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLT--IEPLNQKGKTFLALINQVFPAEEDSKKD--- 57
Query: 63 VDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGA 122
V+D L YLNE +L+N++ RY+ + IYTY +ILIAVNP+ +P +Y+ ++ Y+G
Sbjct: 58 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 117
Query: 123 PFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGD 182
G + PHVFA+AD ++R M SQSI+VSGESGAGKTE TK +++YLT + G
Sbjct: 118 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 173
Query: 183 DRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLERSR 242
++++ +++E+NPLLEAFGNA+TVRN+NSSRFGKFVEI F+ + G + YLLE+SR
Sbjct: 174 GQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 233
Query: 243 VVQITDPERNYHCFYQLCASGRDA--EKYKLDHPSHFHYLNQSKVYELDGVSSAEEYMKT 300
+ ERNYH FY+LCA + E+ L P +F YLN+ + + ++++
Sbjct: 234 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRM 293
Query: 301 KRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADLFM 360
AM +G+ E++ +FR +A +LHLGNI+F KS+ L+ A+L
Sbjct: 294 CTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLG 353
Query: 361 CDVNLLLATLCTRTIQTR----EGSIIKA-LDCNAAVASRDALAKTVYSRLFDWLVEKIN 415
D + L +L TR + T +G++IK L A +RDALAKTVYS LFD +V ++N
Sbjct: 354 LDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVN 413
Query: 416 RSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRRE 475
+ + +S IGVLDI GFE F+HNSFEQFCIN+ NEKLQQ FNE + K EQE Y++E
Sbjct: 414 QCFPFETSSYF-IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKE 472
Query: 476 EINWSYIEFIDNQDVLDLIE 495
+ + + ++DNQD +DLIE
Sbjct: 473 GLGVNEVHYVDNQDCIDLIE 492
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/500 (42%), Positives = 303/500 (60%), Gaps = 20/500 (4%)
Query: 6 GSKVWVEDKDLAWVAAEVVS---DSVGRHVQVLTATGKKVLAAPERVFLRATDDDEEHGG 62
G VW + +V DS+ ++ L GK LA +VF D ++
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLT--IEPLNQKGKTFLALINQVFPAEEDSKKD--- 57
Query: 63 VDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGA 122
V+D L YLNE +L+N++ RY+ + IYTY +ILIAVNP+ +P +Y+ ++ Y+G
Sbjct: 58 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 117
Query: 123 PFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGD 182
G + PHVFA+AD ++R M SQSI+VSGESGAGKTE TK +++YLT + G
Sbjct: 118 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 173
Query: 183 DRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLERSR 242
+++ +++E+NPLLEAFGNA+TVRN+NSSRFGKFVEI F+ + G + YLLE+SR
Sbjct: 174 GQDIYDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 233
Query: 243 VVQITDPERNYHCFYQLCASGRDA--EKYKLDHPSHFHYLNQSKVYELDGVSSAEEYMKT 300
+ ERNYH FY+LCA + E+ L P +F YLN+ + + ++++
Sbjct: 234 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRM 293
Query: 301 KRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADLFM 360
AM +G+ E++ +FR +A +LHLGNI+F KS+ L+ A+L
Sbjct: 294 CTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLG 353
Query: 361 CDVNLLLATLCTRTIQTR----EGSIIKA-LDCNAAVASRDALAKTVYSRLFDWLVEKIN 415
D + L +L TR + T +G++IK L A +RDALAKTVYS LFD +V ++N
Sbjct: 354 LDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVN 413
Query: 416 RSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRRE 475
+ + +S IGVLDI GFE F+HNSFEQFCIN+ NEKLQQ FNE + K EQE Y++E
Sbjct: 414 QCFPFETSSYF-IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKE 472
Query: 476 EINWSYIEFIDNQDVLDLIE 495
+ + + ++DNQD +DLIE
Sbjct: 473 GLGVNEVHYVDNQDCIDLIE 492
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/526 (40%), Positives = 306/526 (58%), Gaps = 46/526 (8%)
Query: 6 GSKVWVEDKDLAWVAAEVVS---DSVGRHVQVLTATGKKVLAAPERVFLRATDDDEEHGG 62
G VW + +V DS+ ++ L GK LA +VF D ++
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLT--IEPLNQKGKTFLALINQVFPAEEDSKKD--- 57
Query: 63 VDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGA 122
V+D L YLNE +L+N++ RY+ + IYTY +ILIAVNP+ +P +Y+ ++ Y+G
Sbjct: 58 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 117
Query: 123 PFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGD 182
G + PHVFA+AD ++R M SQSI+VSGESGAGKTE TK +++YLT + G
Sbjct: 118 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 173
Query: 183 DRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLERSR 242
++++ +++E+NPLLEAFGNA+TVRN+NSSRFGKFVEI F+ + G + YLLE+SR
Sbjct: 174 GQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 233
Query: 243 VVQITDPERNYHCFYQLCASGRDA--EKYKLDHPSHFHYLNQSKV-----YELD------ 289
+ ERNYH FY+LCA + E+ L P +F YLN+ E D
Sbjct: 234 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQN 293
Query: 290 ---------------GVSSAEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSP 334
G+ ++++ AM +G+ E++ +FR +A +LHLGNI+F
Sbjct: 294 RKSPEYLKAGSLKDPGLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEE 353
Query: 335 GKEHDSSVIKDQKSSFHLQMAADLFMCDVNLLLATLCTRTIQTR----EGSIIKA-LDCN 389
KS+ L+ A+L D + L +L TR + T +G++IK L
Sbjct: 354 AGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVE 413
Query: 390 AAVASRDALAKTVYSRLFDWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCI 449
A +RDALAKTVYS LFD +V ++N+ + +S IGVLDI GFE F+HNSFEQFCI
Sbjct: 414 QANNARDALAKTVYSHLFDHVVNRVNQCFPFETSSYF-IGVLDIAGFEYFEHNSFEQFCI 472
Query: 450 NFANEKLQQHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIE 495
N+ NEKLQQ FNE + K EQE Y++E + + + ++DNQD +DLIE
Sbjct: 473 NYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIE 518
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/529 (40%), Positives = 307/529 (58%), Gaps = 46/529 (8%)
Query: 3 LRKGSKVWVEDKDLAWVAAEVVS---DSVGRHVQVLTATGKKVLAAPERVFLRATDDDEE 59
+ G VW + +V DS+ ++ L GK LA +VF D ++
Sbjct: 1 MEDGKPVWAPHPTDGFQVGNIVDIGPDSLT--IEPLNQKGKTFLALINQVFPAEEDSKKD 58
Query: 60 HGGVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQY 119
V+D L YLNE +L+N++ RY+ + IYTY +ILIAVNP+ +P +Y+ ++ Y
Sbjct: 59 ---VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSY 115
Query: 120 KGAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRA 179
+G G + PHVFA+AD ++R M SQSI+VSGESGAGKTE TK +++YLT +
Sbjct: 116 QGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ES 171
Query: 180 AGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLE 239
G ++++ +++E+NPLLEAFGNA+TVRN+NSSRFGKFVEI F+ + G + YLLE
Sbjct: 172 YGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLE 231
Query: 240 RSRVVQITDPERNYHCFYQLCASGRDA--EKYKLDHPSHFHYLN---------------- 281
+SR+ ERNYH FY+LCA + E+ L P +F YLN
Sbjct: 232 KSRICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQI 291
Query: 282 ----QSKVYELDG------VSSAEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIE 331
+S Y G + ++++ AM +G+ E++ +FR +A +LHLGNI+
Sbjct: 292 LQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNID 351
Query: 332 FSPGKEHDSSVIKDQKSSFHLQMAADLFMCDVNLLLATLCTRTIQTR----EGSIIKA-L 386
F KS+ L+ A+L D + L +L TR + T +G++IK L
Sbjct: 352 FEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPL 411
Query: 387 DCNAAVASRDALAKTVYSRLFDWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQ 446
A +RDALAKTVYS LFD +V ++N+ + +S IGVLDI GFE F+HNSFEQ
Sbjct: 412 KVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFETSSYF-IGVLDIAGFEYFEHNSFEQ 470
Query: 447 FCINFANEKLQQHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIE 495
FCIN+ NEKLQQ FNE + K EQE Y++E + + + ++DNQD +DLIE
Sbjct: 471 FCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIE 519
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/526 (40%), Positives = 306/526 (58%), Gaps = 46/526 (8%)
Query: 6 GSKVWVEDKDLAWVAAEVVS---DSVGRHVQVLTATGKKVLAAPERVFLRATDDDEEHGG 62
G VW + +V DS+ ++ L GK LA +VF D ++
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLT--IEPLNQKGKTFLALINQVFPAEEDSKKD--- 57
Query: 63 VDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGA 122
V+D L YLNE +L+N++ RY+ + IYTY +ILIAVNP+ +P +Y+ ++ Y+G
Sbjct: 58 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 117
Query: 123 PFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGD 182
G + PHVFA+AD ++R M SQSI+VSGESGAGKTE TK +++YLT + G
Sbjct: 118 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 173
Query: 183 DRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLERSR 242
++++ +++E+NPLLEAFGNA+TVRN+NSSRFGKFVEI F+ + G + YLLE+SR
Sbjct: 174 GQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 233
Query: 243 VVQITDPERNYHCFYQLCASGRDA--EKYKLDHPSHFHYLN------------------- 281
+ ERNYH FY+LCA + E+ L P +F YLN
Sbjct: 234 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQN 293
Query: 282 -QSKVYELDG------VSSAEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSP 334
+S Y G + ++++ AM +G+ E++ +FR +A +LHLGNI+F
Sbjct: 294 RKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEE 353
Query: 335 GKEHDSSVIKDQKSSFHLQMAADLFMCDVNLLLATLCTRTIQTR----EGSIIKA-LDCN 389
KS+ L+ A+L D + L +L TR + T +G++IK L
Sbjct: 354 AGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVE 413
Query: 390 AAVASRDALAKTVYSRLFDWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCI 449
A +RDALAKTVYS LFD +V ++N+ + +S IGVLDI GFE F+HNSFEQFCI
Sbjct: 414 QANNARDALAKTVYSHLFDHVVNRVNQCFPFETSSYF-IGVLDIAGFEYFEHNSFEQFCI 472
Query: 450 NFANEKLQQHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIE 495
N+ NEKLQQ FNE + K EQE Y++E + + + ++DNQD +DLIE
Sbjct: 473 NYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIE 518
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/529 (40%), Positives = 307/529 (58%), Gaps = 46/529 (8%)
Query: 3 LRKGSKVWVEDKDLAWVAAEVVS---DSVGRHVQVLTATGKKVLAAPERVFLRATDDDEE 59
+ G VW + +V DS+ ++ L GK LA +VF D ++
Sbjct: 1 MEDGKPVWAPHPTDGFQVGNIVDIGPDSLT--IEPLNQKGKTFLALINQVFPAEEDSKKD 58
Query: 60 HGGVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQY 119
V+D L YLNE +L+N++ RY+ + IYTY +ILIAVNP+ +P +Y+ ++ Y
Sbjct: 59 ---VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSY 115
Query: 120 KGAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRA 179
+G G + PHVFA+AD ++R M SQSI+VSGESGAGKTE TK +++YLT +
Sbjct: 116 QGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ES 171
Query: 180 AGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLE 239
G ++++ +++E+NPLLEAFGNA+TVRN+NSSRFGKFVEI F+ + G + YLLE
Sbjct: 172 YGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLE 231
Query: 240 RSRVVQITDPERNYHCFYQLCASGRDA--EKYKLDHPSHFHYLN---------------- 281
+SR+ ERNYH FY+LCA + E+ L P +F YLN
Sbjct: 232 KSRICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQI 291
Query: 282 ----QSKVYELDG------VSSAEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIE 331
+S Y G + ++++ AM +G+ E++ +FR +A +LHLGNI+
Sbjct: 292 LQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNID 351
Query: 332 FSPGKEHDSSVIKDQKSSFHLQMAADLFMCDVNLLLATLCTRTIQTR----EGSIIKA-L 386
F KS+ L+ A+L D + L +L TR + T +G++IK L
Sbjct: 352 FEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPL 411
Query: 387 DCNAAVASRDALAKTVYSRLFDWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQ 446
A +RDALAKTVYS LFD +V ++N+ + +S IGVLDI GFE F+HNSFEQ
Sbjct: 412 KVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFETSSYF-IGVLDIAGFEYFEHNSFEQ 470
Query: 447 FCINFANEKLQQHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIE 495
FCIN+ NEKLQQ FNE + K EQE Y++E + + + ++DNQD +DLIE
Sbjct: 471 FCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIE 519
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/526 (40%), Positives = 305/526 (57%), Gaps = 46/526 (8%)
Query: 6 GSKVWVEDKDLAWVAAEVVS---DSVGRHVQVLTATGKKVLAAPERVFLRATDDDEEHGG 62
G VW + +V DS+ ++ L GK LA +VF D ++
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLT--IEPLNQKGKTFLALINQVFPAEEDSKKD--- 57
Query: 63 VDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGA 122
V+D L YLNE +L+N++ RY+ + IYTY +ILIAVNP+ +P +Y+ ++ Y+G
Sbjct: 58 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 117
Query: 123 PFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGD 182
G + PHVFA+AD ++R M SQSI+VSGESGAGKTE TK +++YLT + G
Sbjct: 118 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 173
Query: 183 DRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLERSR 242
+++ +++E+NPLLEAFGNA+TVRN+NSSRFGKFVEI F+ + G + YLLE+SR
Sbjct: 174 GQDIYDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 233
Query: 243 VVQITDPERNYHCFYQLCASGRDA--EKYKLDHPSHFHYLN------------------- 281
+ ERNYH FY+LCA + E+ L P +F YLN
Sbjct: 234 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQN 293
Query: 282 -QSKVYELDG------VSSAEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSP 334
+S Y G + ++++ AM +G+ E++ +FR +A +LHLGNI+F
Sbjct: 294 RKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEE 353
Query: 335 GKEHDSSVIKDQKSSFHLQMAADLFMCDVNLLLATLCTRTIQTR----EGSIIKA-LDCN 389
KS+ L+ A+L D + L +L TR + T +G++IK L
Sbjct: 354 AGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVE 413
Query: 390 AAVASRDALAKTVYSRLFDWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCI 449
A +RDALAKTVYS LFD +V ++N+ + +S IGVLDI GFE F+HNSFEQFCI
Sbjct: 414 QANNARDALAKTVYSHLFDHVVNRVNQCFPFETSSYF-IGVLDIAGFEYFEHNSFEQFCI 472
Query: 450 NFANEKLQQHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIE 495
N+ NEKLQQ FNE + K EQE Y++E + + + ++DNQD +DLIE
Sbjct: 473 NYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIE 518
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/497 (41%), Positives = 297/497 (59%), Gaps = 41/497 (8%)
Query: 32 VQVLTATGKKVLAAPERVFLRATDDDEEHGGVDDMTKLTYLNEPGVLYNLERRYALNDIY 91
++ L GK LA +VF D ++ V+D L YLNE +L+N++ RY+ + IY
Sbjct: 27 IEPLNQKGKTFLALINQVFPAEEDSKKD---VEDNCSLMYLNEATLLHNIKVRYSKDRIY 83
Query: 92 TYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEHQSQSI 151
TY +ILIAVNP+ +P +Y+ ++ Y+G G + PHVFA+AD ++R M SQSI
Sbjct: 84 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 143
Query: 152 LVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRNVEQQVLESNPLLEAFGNARTVRNDNS 211
+VSGESGAGKTE TK +++YLT + G ++++ +++E+NPLLEAFGNA+TVRN+NS
Sbjct: 144 IVSGESGAGKTENTKFVLRYLT----ESYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNS 199
Query: 212 SRFGKFVEIQFDTNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASGRDA--EKY 269
SRFGKFVEI F+ + G + YLLE+SR+ ERNYH FY+LCA + E+
Sbjct: 200 SRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDIRERL 259
Query: 270 KLDHPSHFHYLN--------------------QSKVYELDG------VSSAEEYMKTKRA 303
L P +F YLN +S Y G + ++++ A
Sbjct: 260 HLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTA 319
Query: 304 MDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADLFMCDV 363
M +G+ E++ +FR +A +LHLGNI+F KS+ L+ A+L D
Sbjct: 320 MKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQ 379
Query: 364 NLLLATLCTRTIQTR----EGSIIKA-LDCNAAVASRDALAKTVYSRLFDWLVEKINRSV 418
+ L +L TR + T +G++IK L A +RDALAKTVYS LFD +V ++N+
Sbjct: 380 DDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 439
Query: 419 GQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEIN 478
+ +S IGVLDI GFE F+HNSFEQFCIN+ NEKLQQ FNE + K EQE Y++E +
Sbjct: 440 PFETSSYF-IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLG 498
Query: 479 WSYIEFIDNQDVLDLIE 495
+ + ++DNQD +DLIE
Sbjct: 499 VNEVHYVDNQDCIDLIE 515
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/497 (41%), Positives = 297/497 (59%), Gaps = 41/497 (8%)
Query: 32 VQVLTATGKKVLAAPERVFLRATDDDEEHGGVDDMTKLTYLNEPGVLYNLERRYALNDIY 91
++ L GK LA +VF D ++ V+D L YLNE +L+N++ RY+ + IY
Sbjct: 40 IEPLNQKGKTFLALINQVFPAEEDSKKD---VEDNCSLMYLNEATLLHNIKVRYSKDRIY 96
Query: 92 TYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEHQSQSI 151
TY +ILIAVNP+ +P +Y+ ++ Y+G G + PHVFA+AD ++R M SQSI
Sbjct: 97 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 156
Query: 152 LVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRNVEQQVLESNPLLEAFGNARTVRNDNS 211
+VSGESGAGKTE TK +++YLT + G ++++ +++E+NPLLEAFGNA+TVRN+NS
Sbjct: 157 IVSGESGAGKTENTKFVLRYLT----ESYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNS 212
Query: 212 SRFGKFVEIQFDTNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASGRDA--EKY 269
SRFGKFVEI F+ + G + YLLE+SR+ ERNYH FY+LCA + E+
Sbjct: 213 SRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDIRERL 272
Query: 270 KLDHPSHFHYLN--------------------QSKVYELDG------VSSAEEYMKTKRA 303
L P +F YLN +S Y G + ++++ A
Sbjct: 273 HLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTA 332
Query: 304 MDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADLFMCDV 363
M +G+ E++ +FR +A +LHLGNI+F KS+ L+ A+L D
Sbjct: 333 MKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQ 392
Query: 364 NLLLATLCTRTIQTR----EGSIIKA-LDCNAAVASRDALAKTVYSRLFDWLVEKINRSV 418
+ L +L TR + T +G++IK L A +RDALAKTVYS LFD +V ++N+
Sbjct: 393 DDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 452
Query: 419 GQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEIN 478
+ +S IGVLDI GFE F+HNSFEQFCIN+ NEKLQQ FNE + K EQE Y++E +
Sbjct: 453 PFETSSYF-IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLG 511
Query: 479 WSYIEFIDNQDVLDLIE 495
+ + ++DNQD +DLIE
Sbjct: 512 VNEVHYVDNQDCIDLIE 528
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/497 (41%), Positives = 297/497 (59%), Gaps = 41/497 (8%)
Query: 32 VQVLTATGKKVLAAPERVFLRATDDDEEHGGVDDMTKLTYLNEPGVLYNLERRYALNDIY 91
++ L GK LA +VF D ++ V+D L YLNE +L+N++ RY+ + IY
Sbjct: 40 IEPLNQKGKTFLALINQVFPAEEDSKKD---VEDNCSLMYLNEATLLHNIKVRYSKDRIY 96
Query: 92 TYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEHQSQSI 151
TY +ILIAVNP+ +P +Y+ ++ Y+G G + PHVFA+AD ++R M SQSI
Sbjct: 97 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 156
Query: 152 LVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRNVEQQVLESNPLLEAFGNARTVRNDNS 211
+VSGESGAGKTE TK +++YLT + G ++++ +++E+NPLLEAFGNA+TVRN+NS
Sbjct: 157 IVSGESGAGKTENTKFVLRYLT----ESYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNS 212
Query: 212 SRFGKFVEIQFDTNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASGRDA--EKY 269
SRFGKFVEI F+ + G + YLLE+SR+ ERNYH FY+LCA + E+
Sbjct: 213 SRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDIRERL 272
Query: 270 KLDHPSHFHYLN--------------------QSKVYELDG------VSSAEEYMKTKRA 303
L P +F YLN +S Y G + ++++ A
Sbjct: 273 HLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTA 332
Query: 304 MDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADLFMCDV 363
M +G+ E++ +FR +A +LHLGNI+F KS+ L+ A+L D
Sbjct: 333 MKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQ 392
Query: 364 NLLLATLCTRTIQTR----EGSIIKA-LDCNAAVASRDALAKTVYSRLFDWLVEKINRSV 418
+ L +L TR + T +G++IK L A +RDALAKTVYS LFD +V ++N+
Sbjct: 393 DDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 452
Query: 419 GQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEIN 478
+ +S IGVLDI GFE F+HNSFEQFCIN+ NEKLQQ FNE + K EQE Y++E +
Sbjct: 453 PFETSSYF-IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLG 511
Query: 479 WSYIEFIDNQDVLDLIE 495
+ + ++DNQD +DLIE
Sbjct: 512 VNEVHYVDNQDCIDLIE 528
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/497 (41%), Positives = 296/497 (59%), Gaps = 41/497 (8%)
Query: 32 VQVLTATGKKVLAAPERVFLRATDDDEEHGGVDDMTKLTYLNEPGVLYNLERRYALNDIY 91
++ L GK LA +VF D ++ V+D L YLNE +L+N++ RY+ + IY
Sbjct: 28 IEPLNQKGKTFLALINQVFPAEEDSKKD---VEDNCSLMYLNEATLLHNIKVRYSKDRIY 84
Query: 92 TYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEHQSQSI 151
TY +ILIAVNP+ +P +Y+ ++ Y+G G + PHVFA+AD ++R M SQSI
Sbjct: 85 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 144
Query: 152 LVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRNVEQQVLESNPLLEAFGNARTVRNDNS 211
+VSGESGAGKTE TK +++YLT + G +++ +++E+NPLLEAFGNA+TVRN+NS
Sbjct: 145 IVSGESGAGKTENTKFVLRYLT----ESYGTGQDIYDRIVEANPLLEAFGNAKTVRNNNS 200
Query: 212 SRFGKFVEIQFDTNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASGRDA--EKY 269
SRFGKFVEI F+ + G + YLLE+SR+ ERNYH FY+LCA + E+
Sbjct: 201 SRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDIRERL 260
Query: 270 KLDHPSHFHYLN--------------------QSKVYELDG------VSSAEEYMKTKRA 303
L P +F YLN +S Y G + ++++ A
Sbjct: 261 HLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTA 320
Query: 304 MDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADLFMCDV 363
M +G+ E++ +FR +A +LHLGNI+F KS+ L+ A+L D
Sbjct: 321 MKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQ 380
Query: 364 NLLLATLCTRTIQTR----EGSIIKA-LDCNAAVASRDALAKTVYSRLFDWLVEKINRSV 418
+ L +L TR + T +G++IK L A +RDALAKTVYS LFD +V ++N+
Sbjct: 381 DDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 440
Query: 419 GQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEIN 478
+ +S IGVLDI GFE F+HNSFEQFCIN+ NEKLQQ FNE + K EQE Y++E +
Sbjct: 441 PFETSSYF-IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLG 499
Query: 479 WSYIEFIDNQDVLDLIE 495
+ + ++DNQD +DLIE
Sbjct: 500 VNEVHYVDNQDCIDLIE 516
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 299/505 (59%), Gaps = 32/505 (6%)
Query: 10 WVEDKDLAWVAAEVVSDSVGRHVQVLTATGKKVLAAPERVFLRATD----DDEEHGGVDD 65
WV D+ + +AE+ S S G + V K++A ++ D + + ++D
Sbjct: 35 WVPDEKEGFASAEIQS-SKGDEITV------KIVADSSTRTVKKDDIQSMNPPKFEKLED 87
Query: 66 MTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFG 125
M +TYLNE VLYNL RY IYTY+G IAVNP+ +LP +Y ++ +Y+G
Sbjct: 88 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 146
Query: 126 ELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDR- 184
E+ PH+F+VAD +Y+ M+++ ++QS L++GESGAGKTE TK ++ YL V D
Sbjct: 147 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 206
Query: 185 -------NVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYL 237
++E Q++++NP+LEA+GNA+T RN+NSSRFGKF+ I F G+I+GA I TYL
Sbjct: 207 ASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYL 266
Query: 238 LERSRVVQITDPERNYHCFYQLCASG-RDAEKYKLDHPSH--FHYLNQSKVYELDGVSSA 294
LE+SRV ERNYH FYQ+C++ + L P + ++NQ +D +
Sbjct: 267 LEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDV 325
Query: 295 EEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQM 354
EE+ A DI+G + E+++++F+ A+ILH+G ++F + + +S +
Sbjct: 326 EEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQA-----ESDGTAEA 380
Query: 355 AADLFMCDVNL--LLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVE 412
F+C +N LL L ++ + K + N V S ALAK++Y R+F+WLV
Sbjct: 381 EKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVR 440
Query: 413 KINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEY 472
++N+++ IGVLDI GFE F NSFEQ CIN+ NE+LQQ FN H+F +EQEEY
Sbjct: 441 RVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 500
Query: 473 RREEINWSYIEF-IDNQDVLDLIEK 496
++E I W +I+F +D Q +DLIEK
Sbjct: 501 KKEGIAWEFIDFGMDLQMCIDLIEK 525
Score = 126 bits (317), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 127/256 (49%), Gaps = 33/256 (12%)
Query: 497 VTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLFPV------LXXXXXXXXXXXXXXX 550
V Y +L+KN+D + LL +SK P VA LF
Sbjct: 587 VPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTIS 646
Query: 551 XXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAG 610
++ L LM+ L ST PH++RC+ PN L +P + +LHQL+C GVLE +RI G
Sbjct: 647 AVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKG 706
Query: 611 YPTRRTYSDFVDRFGLLALEFMDESY-EEKALTEKILRKLKLE--NFQLGRTKVFLRAGQ 667
+P+R YS+F R+ +LA + + + + K ++EKIL L+++ ++LG TKVF +AG
Sbjct: 707 FPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGV 766
Query: 668 IGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVLQAQCRGCLARKLYGVKRE 727
+G L+ R E L ++ I + QA RG L RK Y ++
Sbjct: 767 LGNLEEMRDERL---SKIIS--------------------MFQAHIRGYLIRKAYKKLQD 803
Query: 728 TAAAIS-LQKYVRRWL 742
+S +Q+ +R+WL
Sbjct: 804 QRIGLSVIQRNIRKWL 819
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 299/505 (59%), Gaps = 32/505 (6%)
Query: 10 WVEDKDLAWVAAEVVSDSVGRHVQVLTATGKKVLAAPERVFLRATD----DDEEHGGVDD 65
WV D+ + +AE+ S S G + V K++A ++ D + + ++D
Sbjct: 35 WVPDEKEGFASAEIQS-SKGDEITV------KIVADSSTRTVKKDDIQSMNPPKFEKLED 87
Query: 66 MTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFG 125
M +TYLNE VLYNL RY IYTY+G IAVNP+ +LP +Y ++ +Y+G
Sbjct: 88 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 146
Query: 126 ELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDR- 184
E+ PH+F+VAD +Y+ M+++ ++QS L++GESGAGKTE TK ++ YL V D
Sbjct: 147 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 206
Query: 185 -------NVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYL 237
++E Q++++NP+LEA+GNA+T RN+NSSRFGKF+ I F G+I+GA I TYL
Sbjct: 207 ASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYL 266
Query: 238 LERSRVVQITDPERNYHCFYQLCASG-RDAEKYKLDHPSH--FHYLNQSKVYELDGVSSA 294
LE+SRV ERNYH FYQ+C++ + L P + ++NQ +D +
Sbjct: 267 LEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDV 325
Query: 295 EEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQM 354
EE+ A DI+G + E+++++F+ A+ILH+G ++F + + +S +
Sbjct: 326 EEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQA-----ESDGTAEA 380
Query: 355 AADLFMCDVNL--LLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVE 412
F+C +N LL L ++ + K + N V S ALAK++Y R+F+WLV
Sbjct: 381 EKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVR 440
Query: 413 KINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEY 472
++N+++ IGVLDI GFE F NSFEQ CIN+ NE+LQQ FN H+F +EQEEY
Sbjct: 441 RVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 500
Query: 473 RREEINWSYIEF-IDNQDVLDLIEK 496
++E I W +I+F +D Q +DLIEK
Sbjct: 501 KKEGIAWEFIDFGMDLQMCIDLIEK 525
Score = 126 bits (317), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 124/256 (48%), Gaps = 33/256 (12%)
Query: 497 VTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLFPV------LXXXXXXXXXXXXXXX 550
V Y +L+KN+D + LL +SK P VA LF
Sbjct: 587 VPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTIS 646
Query: 551 XXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAG 610
++ L LM+ L ST PH++RC+ PN L +P + +LHQL+C GVLE +RI G
Sbjct: 647 AVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKG 706
Query: 611 YPTRRTYSDFVDRFGLLALEFMDESY-EEKALTEKILRKLKLE--NFQLGRTKVFLRAGQ 667
+P+R YS+F R+ +LA + + + + K ++EKIL L+++ ++LG TKVF +AG
Sbjct: 707 FPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGV 766
Query: 668 IGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVLQAQCRGCLARKLYGVKRE 727
+G L+ R E L + QA RG L RK Y ++
Sbjct: 767 LGNLEEMRDERLSKIIS-----------------------MFQAHIRGYLIRKAYKKLQD 803
Query: 728 TAAAIS-LQKYVRRWL 742
+S +Q+ +R+WL
Sbjct: 804 QRIGLSVIQRNIRKWL 819
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 299/505 (59%), Gaps = 32/505 (6%)
Query: 10 WVEDKDLAWVAAEVVSDSVGRHVQVLTATGKKVLAAPERVFLRATD----DDEEHGGVDD 65
WV D+ + +AE+ S S G + V K++A ++ D + + ++D
Sbjct: 35 WVPDEKEGFASAEIQS-SKGDEITV------KIVADSSTRTVKKDDIQSMNPPKFEKLED 87
Query: 66 MTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFG 125
M +TYLNE VLYNL RY IYTY+G IAVNP+ +LP +Y ++ +Y+G
Sbjct: 88 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 146
Query: 126 ELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDR- 184
E+ PH+F+VAD +Y+ M+++ ++QS L++GESGAGKTE TK ++ YL V D
Sbjct: 147 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 206
Query: 185 -------NVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYL 237
++E Q++++NP+LEA+GNA+T RN+NSSRFGKF+ I F G+I+GA I TYL
Sbjct: 207 ASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYL 266
Query: 238 LERSRVVQITDPERNYHCFYQLCASG-RDAEKYKLDHPSH--FHYLNQSKVYELDGVSSA 294
LE+SRV ERNYH FYQ+C++ + L P + ++NQ +D +
Sbjct: 267 LEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDV 325
Query: 295 EEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQM 354
EE+ A DI+G + E+++++F+ A+ILH+G ++F + + +S +
Sbjct: 326 EEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQA-----ESDGTAEA 380
Query: 355 AADLFMCDVNL--LLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVE 412
F+C +N LL L ++ + K + N V S ALAK++Y R+F+WLV
Sbjct: 381 EKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVR 440
Query: 413 KINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEY 472
++N+++ IGVLDI GFE F NSFEQ CIN+ NE+LQQ FN H+F +EQEEY
Sbjct: 441 RVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 500
Query: 473 RREEINWSYIEF-IDNQDVLDLIEK 496
++E I W +I+F +D Q +DLIEK
Sbjct: 501 KKEGIAWEFIDFGMDLQMCIDLIEK 525
Score = 126 bits (317), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 124/256 (48%), Gaps = 33/256 (12%)
Query: 497 VTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLFPV------LXXXXXXXXXXXXXXX 550
V Y +L+KN+D + LL +SK P VA LF
Sbjct: 587 VPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTIS 646
Query: 551 XXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAG 610
++ L LM+ L ST PH++RC+ PN L +P + +LHQL+C GVLE +RI G
Sbjct: 647 AVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKG 706
Query: 611 YPTRRTYSDFVDRFGLLALEFMDESY-EEKALTEKILRKLKLE--NFQLGRTKVFLRAGQ 667
+P+R YS+F R+ +LA + + + + K ++EKIL L+++ ++LG TKVF +AG
Sbjct: 707 FPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGV 766
Query: 668 IGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVLQAQCRGCLARKLYGVKRE 727
+G L+ R E L + QA RG L RK Y ++
Sbjct: 767 LGNLEEMRDERLSKIIS-----------------------MFQAHIRGYLIRKAYKKLQD 803
Query: 728 TAAAIS-LQKYVRRWL 742
+S +Q+ +R+WL
Sbjct: 804 QRIGLSVIQRNIRKWL 819
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 299/505 (59%), Gaps = 32/505 (6%)
Query: 10 WVEDKDLAWVAAEVVSDSVGRHVQVLTATGKKVLAAPERVFLRATD----DDEEHGGVDD 65
WV D+ + +AE+ S S G + V K++A ++ D + + ++D
Sbjct: 31 WVPDEKEGFASAEIQS-SKGDEITV------KIVADSSTRTVKKDDIQSMNPPKFEKLED 83
Query: 66 MTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFG 125
M +TYLNE VLYNL RY IYTY+G IAVNP+ +LP +Y ++ +Y+G
Sbjct: 84 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 142
Query: 126 ELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDR- 184
E+ PH+F+VAD +Y+ M+++ ++QS L++GESGAGKTE TK ++ YL V D
Sbjct: 143 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 202
Query: 185 -------NVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYL 237
++E Q++++NP+LEA+GNA+T RN+NSSRFGKF+ I F G+I+GA I TYL
Sbjct: 203 ASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYL 262
Query: 238 LERSRVVQITDPERNYHCFYQLCASG-RDAEKYKLDHPSH--FHYLNQSKVYELDGVSSA 294
LE+SRV ERNYH FYQ+C++ + L P + ++NQ +D +
Sbjct: 263 LEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDV 321
Query: 295 EEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQM 354
EE+ A DI+G + E+++++F+ A+ILH+G ++F + + +S +
Sbjct: 322 EEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQA-----ESDGTAEA 376
Query: 355 AADLFMCDVNL--LLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVE 412
F+C +N LL L ++ + K + N V S ALAK++Y R+F+WLV
Sbjct: 377 EKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVR 436
Query: 413 KINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEY 472
++N+++ IGVLDI GFE F NSFEQ CIN+ NE+LQQ FN H+F +EQEEY
Sbjct: 437 RVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 496
Query: 473 RREEINWSYIEF-IDNQDVLDLIEK 496
++E I W +I+F +D Q +DLIEK
Sbjct: 497 KKEGIAWEFIDFGMDLQMCIDLIEK 521
Score = 126 bits (317), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 124/256 (48%), Gaps = 33/256 (12%)
Query: 497 VTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLFPV------LXXXXXXXXXXXXXXX 550
V Y +L+KN+D + LL +SK P VA LF
Sbjct: 583 VPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTIS 642
Query: 551 XXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAG 610
++ L LM+ L ST PH++RC+ PN L +P + +LHQL+C GVLE +RI G
Sbjct: 643 AVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKG 702
Query: 611 YPTRRTYSDFVDRFGLLALEFMDESY-EEKALTEKILRKLKLE--NFQLGRTKVFLRAGQ 667
+P+R YS+F R+ +LA + + + + K ++EKIL L+++ ++LG TKVF +AG
Sbjct: 703 FPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGV 762
Query: 668 IGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVLQAQCRGCLARKLYGVKRE 727
+G L+ R E L + QA RG L RK Y ++
Sbjct: 763 LGNLEEMRDERLSKIIS-----------------------MFQAHIRGYLIRKAYKKLQD 799
Query: 728 TAAAIS-LQKYVRRWL 742
+S +Q+ +R+WL
Sbjct: 800 QRIGLSVIQRNIRKWL 815
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 299/505 (59%), Gaps = 32/505 (6%)
Query: 10 WVEDKDLAWVAAEVVSDSVGRHVQVLTATGKKVLAAPERVFLRATD----DDEEHGGVDD 65
WV D+ + +AE+ S S G + V K++A ++ D + + ++D
Sbjct: 30 WVPDEKEGFASAEIQS-SKGDEITV------KIVADSSTRTVKKDDIQSMNPPKFEKLED 82
Query: 66 MTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFG 125
M +TYLNE VLYNL RY IYTY+G IAVNP+ +LP +Y ++ +Y+G
Sbjct: 83 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 141
Query: 126 ELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDR- 184
E+ PH+F+VAD +Y+ M+++ ++QS L++GESGAGKTE TK ++ YL V D
Sbjct: 142 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 201
Query: 185 -------NVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYL 237
++E Q++++NP+LEA+GNA+T RN+NSSRFGKF+ I F G+I+GA I TYL
Sbjct: 202 ASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYL 261
Query: 238 LERSRVVQITDPERNYHCFYQLCASG-RDAEKYKLDHPSH--FHYLNQSKVYELDGVSSA 294
LE+SRV ERNYH FYQ+C++ + L P + ++NQ +D +
Sbjct: 262 LEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDV 320
Query: 295 EEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQM 354
EE+ A DI+G + E+++++F+ A+ILH+G ++F + + +S +
Sbjct: 321 EEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQA-----ESDGTAEA 375
Query: 355 AADLFMCDVNL--LLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVE 412
F+C +N LL L ++ + K + N V S ALAK++Y R+F+WLV
Sbjct: 376 EKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVR 435
Query: 413 KINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEY 472
++N+++ IGVLDI GFE F NSFEQ CIN+ NE+LQQ FN H+F +EQEEY
Sbjct: 436 RVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 495
Query: 473 RREEINWSYIEF-IDNQDVLDLIEK 496
++E I W +I+F +D Q +DLIEK
Sbjct: 496 KKEGIAWEFIDFGMDLQMCIDLIEK 520
Score = 126 bits (317), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 124/256 (48%), Gaps = 33/256 (12%)
Query: 497 VTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLFPV------LXXXXXXXXXXXXXXX 550
V Y +L+KN+D + LL +SK P VA LF
Sbjct: 582 VPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTIS 641
Query: 551 XXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAG 610
++ L LM+ L ST PH++RC+ PN L +P + +LHQL+C GVLE +RI G
Sbjct: 642 AVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKG 701
Query: 611 YPTRRTYSDFVDRFGLLALEFMDESY-EEKALTEKILRKLKLE--NFQLGRTKVFLRAGQ 667
+P+R YS+F R+ +LA + + + + K ++EKIL L+++ ++LG TKVF +AG
Sbjct: 702 FPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGV 761
Query: 668 IGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVLQAQCRGCLARKLYGVKRE 727
+G L+ R E L + QA RG L RK Y ++
Sbjct: 762 LGNLEEMRDERLSKIIS-----------------------MFQAHIRGYLIRKAYKKLQD 798
Query: 728 TAAAIS-LQKYVRRWL 742
+S +Q+ +R+WL
Sbjct: 799 QRIGLSVIQRNIRKWL 814
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 361 bits (927), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 202/536 (37%), Positives = 311/536 (58%), Gaps = 31/536 (5%)
Query: 9 VWVEDKDLAWVAAEVVSDSVGRHVQVLTATGKKVLAAPERVFLRATDDDEEHGGVDDMTK 68
V+V D +V A++VS G+ V T GK V ++V + + + ++DM
Sbjct: 37 VFVPDDKQEFVKAKIVSREGGK-VTAETEYGKTVTVKEDQVMQQ---NPPKFDKIEDMAM 92
Query: 69 LTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELS 128
LT+L+EP VLYNL+ RY IYTY+G + VNP+ LP +Y ++ Y+G E
Sbjct: 93 LTFLHEPAVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLP-VYTPEVVAAYRGKKRSEAP 151
Query: 129 PHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFV---GGRAAGDDR- 184
PH+F+++D +Y+ M+++ ++QSIL++GESGAGKT TK ++QY + G R+ D
Sbjct: 152 PHIFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKDQSP 211
Query: 185 ---NVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLERS 241
+E Q++++NP LEAFGNA+TVRNDNSSRFGKF+ I F G+++ A I TYLLE+S
Sbjct: 212 GKGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKS 271
Query: 242 RVVQITDPERNYHCFYQLCASGRDAEKYKL----DHPSHFHYLNQSKVYELDGVSSAEEY 297
RV+ ER+YH FYQ+ S + E + ++P + +++Q + + + AEE
Sbjct: 272 RVIFQLKAERDYHIFYQIL-SNKKPELLDMLLITNNPYDYAFISQGET-TVASIDDAEEL 329
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
M T A D++G + E++ ++++ AI+H GN++F + + + + + +A
Sbjct: 330 MATDNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLKQREEQA---EPDGTEEADKSAY 386
Query: 358 LFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRS 417
L + LL LC ++ + K + + + ALAK VY R+F+W+V +IN +
Sbjct: 387 LMGLNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINAT 446
Query: 418 VGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEI 477
+ Q IGVLDI GFE F NSFEQ CINF NEKLQQ FN H+F +EQEEY++E I
Sbjct: 447 LETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGI 506
Query: 478 NWSYIEF-IDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLF 532
W++I+F +D Q +DLIEK + ++ E C ++ F A LF
Sbjct: 507 EWTFIDFGMDLQACIDLIEKPMGIMS---------ILEEECMFPKATDMTFKAKLF 553
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 4/130 (3%)
Query: 554 KQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPT 613
++ L LM L ST PH++RC+ PN P +NP ++HQLRC GVLE +RI G+P
Sbjct: 652 RENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRKGFPN 711
Query: 614 RRTYSDFVDRFGLLALEFMDES--YEEKALTEKILRKLKLEN--FQLGRTKVFLRAGQIG 669
R Y DF R+ +L + E + + EK+L L +++ ++ G TKVF +AG +G
Sbjct: 712 RILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDIDHNQYKFGHTKVFFKAGLLG 771
Query: 670 ILDSRRAEVL 679
+L+ R E L
Sbjct: 772 LLEEMRDERL 781
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 359 bits (921), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 195/502 (38%), Positives = 292/502 (58%), Gaps = 25/502 (4%)
Query: 10 WVEDKDLAWVAAEVVSDSVGRHVQVLTATGKKVLAAPERVFLRATDDDEEHGGVDDMTKL 69
WV D + +AE+ S S G + V + + + E ++DM +
Sbjct: 35 WVPDPKEGFASAEIQS-SKGEEITVKIVSDNSTRTVKKDDIQQMNPPKFEK--LEDMANM 91
Query: 70 TYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSP 129
TYLNE VL NL RY IYTY+G IAVNP+ +LP +Y ++ +Y+G E+ P
Sbjct: 92 TYLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPP 150
Query: 130 HVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDR----- 184
H+F+VAD +Y+ M+++ ++QS L++GESGAGKTE+TK ++ Y V
Sbjct: 151 HLFSVADNAYQNMVTDRENQSCLITGESGAGKTESTKKVIMYFARVAANLYKQKEEPVPN 210
Query: 185 ----NVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
N+E Q++E+NP+LEAFGNA+TVRN+NSSRFGKF+ I F G+I+GA I TYLLE+
Sbjct: 211 LRASNLEDQIIEANPVLEAFGNAKTVRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEK 270
Query: 241 SRVVQITDPERNYHCFYQLCASG-RDAEKYKLDHPSH--FHYLNQSKVYELDGVSSAEEY 297
SRV ERNYH FYQ+C++ + + L P + ++NQ +D + EE+
Sbjct: 271 SRVTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVDNIDDVEEF 329
Query: 298 MKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAAD 357
A DI+G + E++ ++F+ A+ILH+G ++F + + +S +
Sbjct: 330 KLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQA-----ESDGTAEAEKV 384
Query: 358 LFMCDVNL--LLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKIN 415
F+C +N LL L ++ + K + + S AL+K++Y R+F+WLV+++N
Sbjct: 385 AFLCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKRVN 444
Query: 416 RSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRRE 475
R++ IGVLDI GFE F NSFEQ CIN+ NE+LQQ FN H+F +EQEEY++E
Sbjct: 445 RTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKE 504
Query: 476 EINWSYIEF-IDNQDVLDLIEK 496
I W +I+F +D Q +DLIEK
Sbjct: 505 GIQWEFIDFGMDLQMCIDLIEK 526
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 121/257 (47%), Gaps = 34/257 (13%)
Query: 497 VTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLF-------PVLXXXXXXXXXXXXXX 549
V Y +LDKN+D + +LL+ SK P VA LF
Sbjct: 588 VPYSIAGWLDKNKDPINENVVSLLAVSKEPLVAELFRAPDEPAGGAGGKKKKKSSAFQTI 647
Query: 550 XXXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLA 609
++ L LM L T PH++RC+ PN P + +LHQL+C GVLE +RI
Sbjct: 648 SAVHRESLNKLMCNLRRTNPHFVRCIIPNLEKDPGLVDAELVLHQLQCNGVLEGIRICRK 707
Query: 610 GYPTRRTYSDFVDRFGLLALEFMDESY-EEKALTEKILRKLKLE--NFQLGRTKVFLRAG 666
G+P+R YS+F R+ +LA + + + + K ++EKIL L+++ ++LG TKVF +AG
Sbjct: 708 GFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILTGLQMDPSEYRLGTTKVFFKAG 767
Query: 667 QIGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVLQAQCRGCLARKLYGVKR 726
+G L+ R E L + QA RG L RK Y +
Sbjct: 768 VLGNLEEMRDERLSKIIS-----------------------MFQAHIRGYLIRKAYKKLQ 804
Query: 727 ETAAAIS-LQKYVRRWL 742
+ +S +Q+ +R+WL
Sbjct: 805 DQRIGLSVIQRNIRKWL 821
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 356 bits (914), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 201/510 (39%), Positives = 302/510 (59%), Gaps = 37/510 (7%)
Query: 7 SKVWVEDKDLAWVAAEVVSDSVGRHVQVLTATGKKVLAAPERVFLRATDDDEEHGGVDDM 66
S V+V ++V + S G+ V V T G+ + ++VF + + ++ ++DM
Sbjct: 33 SSVFVVHPKESFVKGTIQSKEGGK-VTVKTEGGETLTVKEDQVF---SMNPPKYDKIEDM 88
Query: 67 TKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGE 126
+T+L+EP VLYNL+ RYA IYTY+G + VNP+ LP +YN ++ Y+G E
Sbjct: 89 AMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLP-VYNPKVVLAYRGKKRQE 147
Query: 127 LSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRNV 186
PH+F+++D +Y+ M+++ ++QSIL++GESGAGKT TK ++QY + A+G+ +
Sbjct: 148 APPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIA--ASGEKKKE 205
Query: 187 EQ----------QVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTY 236
EQ Q++ +NPLLEAFGNA+TVRNDNSSRFGKF+ I F G+++ A I TY
Sbjct: 206 EQSGKMQGTLEDQIISANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETY 265
Query: 237 LLERSRVVQITDPERNYHCFYQLCASGRDAEKYKL----DHPSHFHYLNQSKVYELDGVS 292
LLE+SRV ER+YH FYQ+ S + E + +P +HY++Q ++ + +
Sbjct: 266 LLEKSRVTFQLPAERSYHIFYQIM-SNKKPELIDMLLITTNPYDYHYVSQGEI-TVPSID 323
Query: 293 SAEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGK-----EHDSSVIKDQK 347
EE M T A+DI+G S +++ AI++ A++H GN++F + E D + + D+
Sbjct: 324 DQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADK- 382
Query: 348 SSFHLQMAADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLF 407
AA L + LL LC ++ + K + S ALAK VY ++F
Sbjct: 383 -------AAYLMGLNSAELLKALCYPRVKVGNEFVTKGQTVSQVHNSVGALAKAVYEKMF 435
Query: 408 DWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKM 467
W+V +IN+ + Q IGVLDI GFE F NSFEQ CINF NEKLQQ FN H+F +
Sbjct: 436 LWMVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVL 495
Query: 468 EQEEYRREEINWSYIEF-IDNQDVLDLIEK 496
EQEEY++E I W +I+F +D ++LIEK
Sbjct: 496 EQEEYKKEGIEWEFIDFGMDLAACIELIEK 525
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 554 KQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPT 613
++ L LM L ST PH++RC+ PN P E+ +LHQLRC GVLE +RI G+P+
Sbjct: 651 RENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPS 710
Query: 614 RRTYSDFVDRFGLLALEFMDES--YEEKALTEKILRKLKLEN--FQLGRTKVFLRAGQIG 669
R Y+DF R+ +L + E + K +EK+L + +++ ++ G TKVF +AG +G
Sbjct: 711 RVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGSIDVDHTQYRFGHTKVFFKAGLLG 770
Query: 670 ILDSRRAEVLDSAARCIQHRWRTF---IAHRNFVSIRAAAFVLQAQCRGCLARK 720
+L+ R + L Q R R F + +R V R + F +Q R + K
Sbjct: 771 LLEEMRDDKLAEIITRTQARCRGFLMRVEYRRMVERRESIFCIQYNVRSFMNVK 824
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 355 bits (910), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/508 (39%), Positives = 298/508 (58%), Gaps = 35/508 (6%)
Query: 10 WVEDKDLAWVAAEVVSDSVGRHVQVLT-ATGKKVLAAPERVFLRATDDDEEHGGVDDMTK 68
WV D D +V AE+ S + G V V T T + + + + R E + DM
Sbjct: 35 WVPDPDFGFVGAEIQS-TKGDEVTVKTDKTQETRVVKKDDIGQRNPPKFEMNM---DMAN 90
Query: 69 LTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELS 128
LT+LNE +L+NL RY IYTY+G IA+NP+ +LP +Y ++++Y+G E+
Sbjct: 91 LTFLNEASILHNLRSRYESGFIYTYSGLFCIAINPYRRLP-IYTQGLVDKYRGKRRAEMP 149
Query: 129 PHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDR---- 184
PH+F++AD +Y+ M+ + ++QS+L++GESGAGKTE TK ++QY V AG
Sbjct: 150 PHLFSIADNAYQYMLQDRENQSMLITGESGAGKTENTKKVIQYFALVAASLAGKKDKKEE 209
Query: 185 ---------NVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRT 235
+E Q+++ NP+LEA+GNA+T RN+NSSRFGKF+ I F T G+I+GA I T
Sbjct: 210 EKKKDEKKGTLEDQIVQCNPVLEAYGNAKTTRNNNSSRFGKFIRIHFGTQGKIAGADIET 269
Query: 236 YLLERSRVVQITDPERNYHCFYQLCASG--RDAEK-YKLDHPSHFHYLNQSKVYELDGVS 292
YLLE+SRV ERNYH FYQL + + EK + P + ++NQ + +DG+
Sbjct: 270 YLLEKSRVTYQQSAERNYHIFYQLLSPAFPENIEKILAVPDPGLYGFINQGTL-TVDGID 328
Query: 293 SAEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSS--VIKDQKSSF 350
EE T A D++G + E++ ++++ ILHLG +++ E + + +K +F
Sbjct: 329 DEEEMGLTDTAFDVLGFTDEEKLSMYKCTGCILHLGEMKWKQRGEQAEADGTAEAEKVAF 388
Query: 351 HLQM-AADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDW 409
L + A DL C L I+ + + + + S ALAK++Y R+F+W
Sbjct: 389 LLGVNAGDLLKC--------LLKPKIKVGTEYVTQGRNKDQVTNSIAALAKSLYDRMFNW 440
Query: 410 LVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQ 469
LV ++N+++ Q IGVLDI GFE F NSFEQ CIN+ NE+LQQ FN H+F +EQ
Sbjct: 441 LVRRVNQTLDTKAKRQFFIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQ 500
Query: 470 EEYRREEINWSYIEF-IDNQDVLDLIEK 496
EEY++E I W +I+F +D Q ++LIEK
Sbjct: 501 EEYKKEGIVWEFIDFGLDLQACIELIEK 528
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 123/256 (48%), Gaps = 33/256 (12%)
Query: 497 VTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLF--PVLXX----XXXXXXXXXXXXX 550
V+Y +LDKN+D + LL +SK P V LF P +
Sbjct: 589 VSYSIAGWLDKNKDPINENVVELLQNSKEPIVKMLFTPPRILTPGGKKKKGKSAAFQTIS 648
Query: 551 XXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAG 610
K+ L LM+ L ST PH++RC+ PN L P + +LHQLRC GVLE +RI G
Sbjct: 649 SVHKESLNKLMKNLYSTHPHFVRCIIPNELKTPGLIDAALVLHQLRCNGVLEGIRICRKG 708
Query: 611 YPTRRTYSDFVDRFGLLALEFMDESYEE-KALTEKILRKLKLE--NFQLGRTKVFLRAGQ 667
+P R YS+F R+ +LA + + + K +T+K L L+L+ ++LG TKVF +AG
Sbjct: 709 FPNRIIYSEFKQRYSILAPNAVPSGFADGKVVTDKALSALQLDPNEYRLGNTKVFFKAGV 768
Query: 668 IGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVLQAQCRGCLARKLYGVKRE 727
+G+L+ R E L + QA RG L RK Y ++
Sbjct: 769 LGMLEDMRDERLSKIIS-----------------------MFQAHIRGYLMRKAYKKLQD 805
Query: 728 TAAAISL-QKYVRRWL 742
++L Q+ VR+WL
Sbjct: 806 QRIGLTLIQRNVRKWL 821
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 353 bits (906), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 193/503 (38%), Positives = 292/503 (58%), Gaps = 26/503 (5%)
Query: 10 WVEDKDLAWVAAEVVSDSVGRHVQVLTATGKKVLAAPERVFLRATDDDEEHGGVDDMTKL 69
WV D + +AE+ S S G + V + + + E ++DM +
Sbjct: 35 WVPDPKEGFASAEIQS-SKGEEITVKIVSDNSTRTVKKDDIQQMNPPKFEK--LEDMANM 91
Query: 70 TYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSP 129
TYLNE VL NL RY IYTY+G IAVNP+ +LP +Y ++ +Y+G E+ P
Sbjct: 92 TYLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPP 150
Query: 130 HVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVG----------GRA 179
H+F+VAD +Y+ M+++ ++QS L++GESGAGKTE TK ++ YL V A
Sbjct: 151 HLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKTSEEEEA 210
Query: 180 AGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLE 239
++E Q++++NP+LEA+GNA+T RN+NSSRFGKF+ I F G+I+GA I TYLLE
Sbjct: 211 DQKKGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLE 270
Query: 240 RSRVVQITDPERNYHCFYQLCASG-RDAEKYKLDHPSH--FHYLNQSKVYELDGVSSAEE 296
+SRV ERNYH FYQ+C++ + + L P + ++NQ +D + EE
Sbjct: 271 KSRVTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVDNIDDVEE 329
Query: 297 YMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAA 356
+ A DI+G + E++ ++F+ A+ILH+G ++F + + +S +
Sbjct: 330 FKLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQA-----ESDGTAEAEK 384
Query: 357 DLFMCDVNL--LLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKI 414
F+C +N LL L ++ + K + + S AL+K++Y R+F+WLV+++
Sbjct: 385 VAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKRV 444
Query: 415 NRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRR 474
NR++ IGVLDI GFE F NSFEQ CIN+ NE+LQQ FN H+F +EQEEY++
Sbjct: 445 NRTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKK 504
Query: 475 EEINWSYIEF-IDNQDVLDLIEK 496
E I W +I+F +D Q +DLIEK
Sbjct: 505 EGIQWEFIDFGMDLQMCIDLIEK 527
Score = 126 bits (317), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 125/257 (48%), Gaps = 34/257 (13%)
Query: 497 VTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLF-------PVLXXXXXXXXXXXXXX 549
V Y +LDKN+D + +LL+ SK P VA LF
Sbjct: 589 VPYSIAGWLDKNKDPINENVVSLLAVSKEPLVAELFRAPDEPAGGAGGKKKKKSSAFQTI 648
Query: 550 XXXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLA 609
++ L LM+ L ST PH++RC+ PN L +P + +LHQL+C GVLE +RI
Sbjct: 649 SAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRK 708
Query: 610 GYPTRRTYSDFVDRFGLLALEFMDESY-EEKALTEKILRKLKLE--NFQLGRTKVFLRAG 666
G+P+R YS+F R+ +LA + + + + K ++EKIL L+++ ++LG TKVF +AG
Sbjct: 709 GFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILTGLQMDPSEYRLGTTKVFFKAG 768
Query: 667 QIGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVLQAQCRGCLARKLYGVKR 726
+G L+ R E L + QA RG L RK Y +
Sbjct: 769 VLGNLEEMRDERLSKIIS-----------------------MFQAHIRGYLIRKAYKKLQ 805
Query: 727 ETAAAIS-LQKYVRRWL 742
+ +S +Q+ +R+WL
Sbjct: 806 DQRIGLSVIQRNIRKWL 822
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 345 bits (885), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 296/507 (58%), Gaps = 26/507 (5%)
Query: 9 VWVEDKDLAWVAAEVVSDSVGRHVQV-LTATGKKVLAAPERVFLRATDDDEEHGGVDDMT 67
VWV + + AA + + G V V L GKKV + + + + + V+DM
Sbjct: 34 VWVPSEKHGFEAASIKEEK-GDEVTVELQENGKKVTLSKDDI---QKMNPPKFSKVEDMA 89
Query: 68 KLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGEL 127
+LT LNE VL+NL RY IYTY+G + +NP+ +LP +Y+ +++ YKG E+
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEM 148
Query: 128 SPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRN-- 185
PH++A+AD +YR+M+ + + QSIL +GESGAGKTE TK ++QYL V G
Sbjct: 149 PPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSI 208
Query: 186 ----------VEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRT 235
+E+Q+L++NP+LEAFGNA+TV+NDNSSRFGKF+ I FD G I GA I T
Sbjct: 209 TQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIET 268
Query: 236 YLLERSRVVQITDPERNYHCFYQLCASGRDAEKYK--LDHPSHFHYLNQSKVYELDGVSS 293
YLLE+SR ++ ER +H FY L A + + L+ +++ +L+ V +
Sbjct: 269 YLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQD 327
Query: 294 AEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQ 353
E + +T AM I+G + E+Q +I R ++++L LGNI F + D + + D ++ Q
Sbjct: 328 DEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAA---Q 384
Query: 354 MAADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEK 413
L +V ++ T I+ + KA A + +ALAK + RLF W++ +
Sbjct: 385 KVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTR 444
Query: 414 INRSVGQDMNSQMQ-IGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEY 472
+N+++ + +G+LDI GFE F+ NSFEQ CIN+ NEKLQQ FN +F +EQEEY
Sbjct: 445 VNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEY 504
Query: 473 RREEINWSYIEF-IDNQDVLDLIEKVT 498
+RE I W++I+F +D Q ++LIE+ T
Sbjct: 505 QREGIEWNFIDFGLDLQPCIELIERPT 531
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 123/275 (44%), Gaps = 44/275 (16%)
Query: 490 VLDLIEKVTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLF----------------- 532
+L KVTY + +L KN D + +LL+ S FVA L+
Sbjct: 582 ILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMTE 641
Query: 533 PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSIL 592
L K+QL LM TL +T P+++RC+ PN R K + +L
Sbjct: 642 SSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVL 701
Query: 593 HQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDESY-EEKALTEKILRKLKL 651
QLRC GVLE +RI G+P R + +F R+ +LA + + + + K +++ L+L
Sbjct: 702 EQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALEL 761
Query: 652 EN--FQLGRTKVFLRAGQIGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVL 709
+ +++G++K+F R G + L+ R + I
Sbjct: 762 DPNLYRIGQSKIFFRTGVLAHLEEERD-----------------------LKITDVIIAF 798
Query: 710 QAQCRGCLARKLYGVKRETAAAI-SLQKYVRRWLS 743
QAQCRG LARK + +++ +I +Q VR +++
Sbjct: 799 QAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMN 833
Score = 30.0 bits (66), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 919 MAEIRKENAVLKSSLDSLEKKNSTLELELIKAQKEN---NNTIEKLREVEQKCSSLQQNM 975
+AE++ + A LK+ L KK L+ L + + E NN ++K+RE+E S LQ+++
Sbjct: 1076 IAELQAQIAELKAQL---AKKEEELQAALARLEDETSQKNNALKKIRELESHISDLQEDL 1132
Query: 976 QS 977
+S
Sbjct: 1133 ES 1134
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 345 bits (884), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 296/507 (58%), Gaps = 26/507 (5%)
Query: 9 VWVEDKDLAWVAAEVVSDSVGRHVQV-LTATGKKVLAAPERVFLRATDDDEEHGGVDDMT 67
VWV + + AA + + G V V L GKKV + + + + + V+DM
Sbjct: 34 VWVPSEKHGFEAASIKEEK-GDEVTVELQENGKKVTLSKDDI---QKMNPPKFSKVEDMA 89
Query: 68 KLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGEL 127
+LT LNE VL+NL RY IYTY+G + +NP+ +LP +Y+ +++ YKG E+
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEM 148
Query: 128 SPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRN-- 185
PH++A+AD +YR+M+ + + QSIL +GESGAGKTE TK ++QYL V G
Sbjct: 149 PPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSI 208
Query: 186 ----------VEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRT 235
+E+Q+L++NP+LEAFGNA+TV+NDNSSRFGKF+ I FD G I GA I T
Sbjct: 209 TQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIET 268
Query: 236 YLLERSRVVQITDPERNYHCFYQLCASGRDAEKYK--LDHPSHFHYLNQSKVYELDGVSS 293
YLLE+SR ++ ER +H FY L A + + L+ +++ +L+ V +
Sbjct: 269 YLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQD 327
Query: 294 AEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQ 353
E + +T AM I+G + E+Q +I R ++++L LGNI F + D + + D ++ Q
Sbjct: 328 DEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAA---Q 384
Query: 354 MAADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEK 413
L +V ++ T I+ + KA A + +ALAK + RLF W++ +
Sbjct: 385 KVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTR 444
Query: 414 INRSVGQDMNSQMQ-IGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEY 472
+N+++ + +G+LDI GFE F+ NSFEQ CIN+ NEKLQQ FN +F +EQEEY
Sbjct: 445 VNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEY 504
Query: 473 RREEINWSYIEF-IDNQDVLDLIEKVT 498
+RE I W++I+F +D Q ++LIE+ T
Sbjct: 505 QREGIEWNFIDFGLDLQPCIELIERPT 531
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 126/281 (44%), Gaps = 48/281 (17%)
Query: 490 VLDLIEKVTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLF----------------- 532
+L KVTY + +L KN D + +LL+ S FVA L+
Sbjct: 582 ILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMTE 641
Query: 533 PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSIL 592
L K+QL LM TL +T P+++RC+ PN R K + +L
Sbjct: 642 SSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVL 701
Query: 593 HQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDESY-EEKALTEKILRKLKL 651
QLRC GVLE +RI G+P R + +F R+ +LA + + + + K +++ L+L
Sbjct: 702 EQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALEL 761
Query: 652 EN--FQLGRTKVFLRAGQIGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVL 709
+ +++G++K+F R G + L+ R + I
Sbjct: 762 DPNLYRIGQSKIFFRTGVLAHLEEERD-----------------------LKITDVIIAF 798
Query: 710 QAQCRGCLARKLYGVKRETAAAISLQKYVRRWLSRHAFLKL 750
QAQCRG LARK + +++ A+ K ++R + A+LKL
Sbjct: 799 QAQCRGYLARKAFAKRQQQLTAM---KVIQRNCA--AYLKL 834
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 345 bits (884), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 296/507 (58%), Gaps = 26/507 (5%)
Query: 9 VWVEDKDLAWVAAEVVSDSVGRHVQV-LTATGKKVLAAPERVFLRATDDDEEHGGVDDMT 67
VWV + + AA + + G V V L GKKV + + + + + V+DM
Sbjct: 34 VWVPSEKHGFEAASIKEEK-GDEVTVELQENGKKVTLSKDDI---QKMNPPKFSKVEDMA 89
Query: 68 KLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGEL 127
+LT LNE VL+NL RY IYTY+G + +NP+ +LP +Y+ +++ YKG E+
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEM 148
Query: 128 SPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRN-- 185
PH++A+AD +YR+M+ + + QSIL +GESGAGKTE TK ++QYL V G
Sbjct: 149 PPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSI 208
Query: 186 ----------VEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRT 235
+E+Q+L++NP+LEAFGNA+TV+NDNSSRFGKF+ I FD G I GA I T
Sbjct: 209 TQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIET 268
Query: 236 YLLERSRVVQITDPERNYHCFYQLCASGRDAEKYK--LDHPSHFHYLNQSKVYELDGVSS 293
YLLE+SR ++ ER +H FY L A + + L+ +++ +L+ V +
Sbjct: 269 YLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQD 327
Query: 294 AEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQ 353
E + +T AM I+G + E+Q +I R ++++L LGNI F + D + + D ++ Q
Sbjct: 328 DEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAA---Q 384
Query: 354 MAADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEK 413
L +V ++ T I+ + KA A + +ALAK + RLF W++ +
Sbjct: 385 KVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTR 444
Query: 414 INRSVGQDMNSQMQ-IGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEY 472
+N+++ + +G+LDI GFE F+ NSFEQ CIN+ NEKLQQ FN +F +EQEEY
Sbjct: 445 VNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEY 504
Query: 473 RREEINWSYIEF-IDNQDVLDLIEKVT 498
+RE I W++I+F +D Q ++LIE+ T
Sbjct: 505 QREGIEWNFIDFGLDLQPCIELIERPT 531
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 126/281 (44%), Gaps = 48/281 (17%)
Query: 490 VLDLIEKVTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLF----------------- 532
+L KVTY + +L KN D + +LL+ S FVA L+
Sbjct: 582 ILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMTE 641
Query: 533 PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSIL 592
L K+QL LM TL +T P+++RC+ PN R K + +L
Sbjct: 642 SSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVL 701
Query: 593 HQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDESY-EEKALTEKILRKLKL 651
QLRC GVLE +RI G+P R + +F R+ +LA + + + + K +++ L+L
Sbjct: 702 EQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALEL 761
Query: 652 EN--FQLGRTKVFLRAGQIGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVL 709
+ +++G++K+F R G + L+ R + I
Sbjct: 762 DPNLYRIGQSKIFFRTGVLAHLEEERD-----------------------LKITDVIIAF 798
Query: 710 QAQCRGCLARKLYGVKRETAAAISLQKYVRRWLSRHAFLKL 750
QAQCRG LARK + +++ A+ K ++R + A+LKL
Sbjct: 799 QAQCRGYLARKAFAKRQQQLTAM---KVIQRNCA--AYLKL 834
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 344 bits (883), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 296/507 (58%), Gaps = 26/507 (5%)
Query: 9 VWVEDKDLAWVAAEVVSDSVGRHVQV-LTATGKKVLAAPERVFLRATDDDEEHGGVDDMT 67
VWV + + AA + + G V V L GKKV + + + + + V+DM
Sbjct: 34 VWVPSEKHGFEAASIKEEK-GDEVTVELQENGKKVTLSKDDI---QKMNPPKFSKVEDMA 89
Query: 68 KLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGEL 127
+LT LNE VL+NL RY IYTY+G + +NP+ +LP +Y+ +++ YKG E+
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEM 148
Query: 128 SPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRN-- 185
PH++A+AD +YR+M+ + + QSIL +GESGAGKTE TK ++QYL V G
Sbjct: 149 PPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSI 208
Query: 186 ----------VEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRT 235
+E+Q+L++NP+LEAFGNA+TV+NDNSSRFGKF+ I FD G I GA I T
Sbjct: 209 TQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIET 268
Query: 236 YLLERSRVVQITDPERNYHCFYQLCASGRDAEKYK--LDHPSHFHYLNQSKVYELDGVSS 293
YLLE+SR ++ ER +H FY L A + + L+ +++ +L+ V +
Sbjct: 269 YLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQD 327
Query: 294 AEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQ 353
E + +T AM I+G + E+Q +I R ++++L LGNI F + D + + D ++ Q
Sbjct: 328 DEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAA---Q 384
Query: 354 MAADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEK 413
L +V ++ T I+ + KA A + +ALAK + RLF W++ +
Sbjct: 385 KVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTR 444
Query: 414 INRSVGQDMNSQMQ-IGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEY 472
+N+++ + +G+LDI GFE F+ NSFEQ CIN+ NEKLQQ FN +F +EQEEY
Sbjct: 445 VNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEY 504
Query: 473 RREEINWSYIEF-IDNQDVLDLIEKVT 498
+RE I W++I+F +D Q ++LIE+ T
Sbjct: 505 QREGIEWNFIDFGLDLQPCIELIERPT 531
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 126/281 (44%), Gaps = 48/281 (17%)
Query: 490 VLDLIEKVTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLF----------------- 532
+L KVTY + +L KN D + +LL+ S FVA L+
Sbjct: 582 ILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMTE 641
Query: 533 PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSIL 592
L K+QL LM TL +T P+++RC+ PN R K + +L
Sbjct: 642 SSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVL 701
Query: 593 HQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDESY-EEKALTEKILRKLKL 651
QLRC GVLE +RI G+P R + +F R+ +LA + + + + K +++ L+L
Sbjct: 702 EQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALEL 761
Query: 652 EN--FQLGRTKVFLRAGQIGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVL 709
+ +++G++K+F R G + L+ R + I
Sbjct: 762 DPNLYRIGQSKIFFRTGVLAHLEEERD-----------------------LKITDVIIAF 798
Query: 710 QAQCRGCLARKLYGVKRETAAAISLQKYVRRWLSRHAFLKL 750
QAQCRG LARK + +++ A+ K ++R + A+LKL
Sbjct: 799 QAQCRGYLARKAFAKRQQQLTAM---KVIQRNCA--AYLKL 834
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 343 bits (880), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 296/507 (58%), Gaps = 26/507 (5%)
Query: 9 VWVEDKDLAWVAAEVVSDSVGRHVQV-LTATGKKVLAAPERVFLRATDDDEEHGGVDDMT 67
VWV + + AA + + G V V L GKKV + + + + + V+DM
Sbjct: 34 VWVPSEKHGFEAASIKEEK-GDEVTVELQENGKKVTLSKDDI---QKMNPPKFSKVEDMA 89
Query: 68 KLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGEL 127
+LT LNE VL+NL RY IYTY+G + +NP+ +LP +Y+ +++ YKG E+
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEM 148
Query: 128 SPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRN-- 185
PH++A+AD +YR+M+ + + QSIL +GESGAGKTE TK ++QYL V G
Sbjct: 149 PPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSI 208
Query: 186 ----------VEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRT 235
+E+Q+L++NP+LEAFGNA+TV+NDNSSRFGKF+ I FD G I GA I T
Sbjct: 209 TQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIET 268
Query: 236 YLLERSRVVQITDPERNYHCFYQLCASGRDAEKYK--LDHPSHFHYLNQSKVYELDGVSS 293
YLLE+SR ++ ER +H FY L A + + L+ +++ +L+ V +
Sbjct: 269 YLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQD 327
Query: 294 AEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQ 353
E + +T AM I+G + E+Q +I R ++++L LGNI F + D + + D ++ Q
Sbjct: 328 DEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAA---Q 384
Query: 354 MAADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEK 413
L +V ++ T I+ + KA A + +ALAK + RLF W++ +
Sbjct: 385 KVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTR 444
Query: 414 INRSVGQDMNSQMQ-IGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEY 472
+N+++ + +G+LDI GFE F+ NSFEQ CIN+ NEKLQQ FN +F +EQEEY
Sbjct: 445 VNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEY 504
Query: 473 RREEINWSYIEF-IDNQDVLDLIEKVT 498
+RE I W++I+F +D Q ++LIE+ T
Sbjct: 505 QREGIEWNFIDFGLDLQPCIELIERPT 531
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 114/258 (44%), Gaps = 43/258 (16%)
Query: 490 VLDLIEKVTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLF----------------- 532
+L KVTY + +L KN D + +LL+ S FVA L+
Sbjct: 582 ILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMTE 641
Query: 533 PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSIL 592
L K+QL LM TL +T P+++RC+ PN R K + +L
Sbjct: 642 SSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVL 701
Query: 593 HQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDESY-EEKALTEKILRKLKL 651
QLRC GVLE +RI G+P R + +F R+ +LA + + + + K +++ L+L
Sbjct: 702 EQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALEL 761
Query: 652 EN--FQLGRTKVFLRAGQIGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVL 709
+ +++G++K+F R G + L+ R + I
Sbjct: 762 DPNLYRIGQSKIFFRTGVLAHLEEERD-----------------------LKITDVIIAF 798
Query: 710 QAQCRGCLARKLYGVKRE 727
QAQCRG LARK + +++
Sbjct: 799 QAQCRGYLARKAFAKRQQ 816
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 343 bits (879), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 296/507 (58%), Gaps = 26/507 (5%)
Query: 9 VWVEDKDLAWVAAEVVSDSVGRHVQV-LTATGKKVLAAPERVFLRATDDDEEHGGVDDMT 67
VWV + + AA + + G V V L GKKV + + + + + V+DM
Sbjct: 34 VWVPSEKHGFEAASIKEEK-GDEVTVELQENGKKVTLSKDDI---QKMNPPKFSKVEDMA 89
Query: 68 KLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGEL 127
+LT LNE VL+NL RY IYTY+G + +NP+ +LP +Y+ +++ YKG E+
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEM 148
Query: 128 SPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRN-- 185
PH++A+AD +YR+M+ + + QSIL +GESGAGKTE TK ++QYL V G
Sbjct: 149 PPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSI 208
Query: 186 ----------VEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRT 235
+E+Q+L++NP+LEAFGNA+TV+NDNSSRFGKF+ I FD G I GA I T
Sbjct: 209 TQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIET 268
Query: 236 YLLERSRVVQITDPERNYHCFYQLCASGRDAEKYK--LDHPSHFHYLNQSKVYELDGVSS 293
YLLE+SR ++ ER +H FY L A + + L+ +++ +L+ V +
Sbjct: 269 YLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQD 327
Query: 294 AEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQ 353
E + +T AM I+G + E+Q +I R ++++L LGNI F + D + + D ++ Q
Sbjct: 328 DEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAA---Q 384
Query: 354 MAADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEK 413
L +V ++ T I+ + KA A + +ALAK + RLF W++ +
Sbjct: 385 KVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTR 444
Query: 414 INRSVGQDMNSQMQ-IGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEY 472
+N+++ + +G+LDI GFE F+ NSFEQ CIN+ NEKLQQ FN +F +EQEEY
Sbjct: 445 VNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEY 504
Query: 473 RREEINWSYIEF-IDNQDVLDLIEKVT 498
+RE I W++I+F +D Q ++LIE+ T
Sbjct: 505 QREGIEWNFIDFGLDLQPCIELIERPT 531
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 490 VLDLIEKVTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLF----------------- 532
+L KVTY + +L KN D + +LL+ S FVA L+
Sbjct: 582 ILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMTE 641
Query: 533 PVLXXXXXXXXXXXXXXXXXXKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSIL 592
L K+QL LM TL +T P+++RC+ PN R K + +L
Sbjct: 642 SSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVL 701
Query: 593 HQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDESY-EEKALTEKILRKLKL 651
QLRC GVLE +RI G+P R + +F R+ +LA + + + + K +++ L+L
Sbjct: 702 EQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALEL 761
Query: 652 EN--FQLGRTKVFLRAGQIGILDSRR 675
+ +++G++K+F R G + L+ R
Sbjct: 762 DPNLYRIGQSKIFFRTGVLAHLEEER 787
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 337 bits (863), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/450 (42%), Positives = 274/450 (60%), Gaps = 29/450 (6%)
Query: 63 VDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGA 122
+DM +LT LNE VL+NL RY IYTY+G + +NP+ +LP +Y ++E Y+G
Sbjct: 62 AEDMAELTCLNEASVLHNLRERYYSGLIYTYSGLFCVVINPYKQLP-IYTEAIVEMYRGK 120
Query: 123 PFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFV-----GG 177
E+ PHV+AV + +YR+M+ + + QSIL +GESGAGKTE TK ++QYL V G
Sbjct: 121 KRHEVPPHVYAVTEGAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSPKGR 180
Query: 178 RAAGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYL 237
+ G +E+Q+L++NP+LEAFGNA+TV+NDNSSRFGKF+ I FD G I GA I TYL
Sbjct: 181 KEPGVPGELERQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVAGYIVGANIETYL 240
Query: 238 LERSRVVQITDPERNYHCFYQLCASGRDAEKYKLD---HP-SHFHYLNQSKVYELDGVSS 293
LE+SR ++ E ++H FYQL G E+ K D P SH+ +L +G SS
Sbjct: 241 LEKSRAIRQAKDECSFHIFYQLL--GGAGEQLKADLLLEPCSHYRFLT-------NGPSS 291
Query: 294 A-----EEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKS 348
+ E + +T ++ ++G SHE+ ++ R ++A+L GNI + D + + D +
Sbjct: 292 SPGQERELFQETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKRERNTDQATMPDNTA 351
Query: 349 SFHLQMAADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFD 408
+ L L + D + L T I+ + KA A + +ALAK Y RLF
Sbjct: 352 AQKLCRLLGLGVTDFS---RALLTPRIKVGRDYVQKAQTKEQADFALEALAKATYERLFR 408
Query: 409 WLVEKINRSVGQDMNSQMQ-IGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKM 467
WLV ++NR++ + +G+LDI GFE F+ NSFEQ CIN+ NEKLQQ FN +F +
Sbjct: 409 WLVLRLNRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVL 468
Query: 468 EQEEYRREEINWSYIEF-IDNQDVLDLIEK 496
EQEEY+RE I W++++F +D Q +DLIE+
Sbjct: 469 EQEEYQREGIPWTFLDFGLDLQPCIDLIER 498
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 554 KQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPT 613
K+ L LM TL++T P ++RC+ PN R K E +L QLRC GVLE +RI G+P
Sbjct: 630 KESLSRLMATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPN 689
Query: 614 RRTYSDFVDRFGLLALEFMDESY-EEKALTEKILRKLKLEN--FQLGRTKVFLRAGQIGI 670
R + +F R+ +L + + + + K EK+++ L+L+ +++G++K+F RAG +
Sbjct: 690 RILFQEFRQRYEILTPNAIPKGFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQ 749
Query: 671 LDSRRA 676
L+ RA
Sbjct: 750 LEEERA 755
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 329 bits (844), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 194/509 (38%), Positives = 284/509 (55%), Gaps = 37/509 (7%)
Query: 7 SKVWVEDKDLAWVAAEVVSDSVGRHVQVLTATGKKVLAAPERVFLRATDDDEEHGGVDDM 66
S V+V ++V + S G V V T G+ + ++VF + + + ++DM
Sbjct: 36 SSVFVVHPKQSFVXGTIQSXE-GGXVTVXTEGGETLTVKEDQVF---SMNPPXYDXIEDM 91
Query: 67 TKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGE 126
+T+L+EP VLYNL RYA IYTY+G + VNP+ LP +YN ++ Y+G E
Sbjct: 92 AMMTHLHEPAVLYNLXERYAAWMIYTYSGLFCVTVNPYXWLP-VYNPXVVLAYRGKKRQE 150
Query: 127 LSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRNV 186
PH+F+++D +Y+ M+++ ++QSIL++GESGAGKT T ++QY + A+G+ +
Sbjct: 151 APPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTXRVIQYFATIA--ASGEKKKE 208
Query: 187 EQ----------QVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTY 236
EQ Q++ +NPLLEAFGNA TVRNDNSSRFG F+ I F G+++ A I TY
Sbjct: 209 EQSGKMQGTLEDQIISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETY 268
Query: 237 LLERSRVVQITDPERNYHCFYQLCASGRDAEKYKL----DHPSHFHYLNQSKVYELDGVS 292
LLE SRV ER+YH FYQ+ S E + +P +HY+++ ++ + +
Sbjct: 269 LLEXSRVTFQLPAERSYHIFYQIM-SNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSID 326
Query: 293 SAEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGK-----EHDSSVIKDQK 347
EE M T A+DI+G S ++ AI+ A++H GN++F + E D + + D
Sbjct: 327 DQEELMATDSAIDILGFSADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADX- 385
Query: 348 SSFHLQMAADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLF 407
AA L + LL LC + ++ + S ALA VY +F
Sbjct: 386 -------AAYLMGLNSAELLKALCYPRVGVGNEAVTXGETVSEVHNSVGALAXAVYEXMF 438
Query: 408 DWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKM 467
W+V +IN+ + Q IGVLDI GFE F NSFEQ CINF NE LQQ FN H+F +
Sbjct: 439 LWMVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVL 498
Query: 468 EQEEYRREEINWSYIEF-IDNQDVLDLIE 495
EQEEY E I W +I+F +D ++LIE
Sbjct: 499 EQEEYXXEGIEWEFIDFGMDLAACIELIE 527
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 89/171 (52%), Gaps = 7/171 (4%)
Query: 554 KQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPT 613
++ L LM L ST PH++RC+ PN P E+ +LHQLRC GVLE +RI G+P+
Sbjct: 654 RENLNXLMANLRSTHPHFVRCIIPNETXTPGAMEHELVLHQLRCNGVLEGIRICRKGFPS 713
Query: 614 RRTYSDFVDRFGLLALEFMDES--YEEKALTEKILRKLKLENFQ--LGRTKVFLRAGQIG 669
R Y+DF R+ +L + E + K +EK+L +++ Q G T VF AG +G
Sbjct: 714 RVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTXVFFXAGLLG 773
Query: 670 ILDSRRAEVLDSAARCIQHRWRTF---IAHRNFVSIRAAAFVLQAQCRGCL 717
+L+ R + L Q R R F + +R V R + F +Q R +
Sbjct: 774 LLEEMRDDXLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFM 824
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 329 bits (844), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 194/509 (38%), Positives = 284/509 (55%), Gaps = 37/509 (7%)
Query: 7 SKVWVEDKDLAWVAAEVVSDSVGRHVQVLTATGKKVLAAPERVFLRATDDDEEHGGVDDM 66
S V+V ++V + S G V V T G+ + ++VF + + + ++DM
Sbjct: 33 SSVFVVHPKQSFVXGTIQSXE-GGXVTVXTEGGETLTVKEDQVF---SMNPPXYDXIEDM 88
Query: 67 TKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGE 126
+T+L+EP VLYNL RYA IYTY+G + VNP+ LP +YN ++ Y+G E
Sbjct: 89 AMMTHLHEPAVLYNLXERYAAWMIYTYSGLFCVTVNPYXWLP-VYNPXVVLAYRGKKRQE 147
Query: 127 LSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRNV 186
PH+F+++D +Y+ M+++ ++QSIL++GESGAGKT T ++QY + A+G+ +
Sbjct: 148 APPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTXRVIQYFATIA--ASGEKKKE 205
Query: 187 EQ----------QVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTY 236
EQ Q++ +NPLLEAFGNA TVRNDNSSRFG F+ I F G+++ A I TY
Sbjct: 206 EQSGKMQGTLEDQIISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETY 265
Query: 237 LLERSRVVQITDPERNYHCFYQLCASGRDAEKYKL----DHPSHFHYLNQSKVYELDGVS 292
LLE SRV ER+YH FYQ+ S E + +P +HY+++ ++ + +
Sbjct: 266 LLEXSRVTFQLPAERSYHIFYQIM-SNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSID 323
Query: 293 SAEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGK-----EHDSSVIKDQK 347
EE M T A+DI+G S ++ AI+ A++H GN++F + E D + + D
Sbjct: 324 DQEELMATDSAIDILGFSADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADX- 382
Query: 348 SSFHLQMAADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLF 407
AA L + LL LC + ++ + S ALA VY +F
Sbjct: 383 -------AAYLMGLNSAELLKALCYPRVGVGNEAVTXGETVSEVHNSVGALAXAVYEXMF 435
Query: 408 DWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKM 467
W+V +IN+ + Q IGVLDI GFE F NSFEQ CINF NE LQQ FN H+F +
Sbjct: 436 LWMVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVL 495
Query: 468 EQEEYRREEINWSYIEF-IDNQDVLDLIE 495
EQEEY E I W +I+F +D ++LIE
Sbjct: 496 EQEEYXXEGIEWEFIDFGMDLAACIELIE 524
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 89/171 (52%), Gaps = 7/171 (4%)
Query: 554 KQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPT 613
++ L LM L ST PH++RC+ PN P E+ +LHQLRC GVLE +RI G+P+
Sbjct: 651 RENLNXLMANLRSTHPHFVRCIIPNETXTPGAMEHELVLHQLRCNGVLEGIRICRKGFPS 710
Query: 614 RRTYSDFVDRFGLLALEFMDES--YEEKALTEKILRKLKLENFQ--LGRTKVFLRAGQIG 669
R Y+DF R+ +L + E + K +EK+L +++ Q G T VF AG +G
Sbjct: 711 RVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTXVFFXAGLLG 770
Query: 670 ILDSRRAEVLDSAARCIQHRWRTF---IAHRNFVSIRAAAFVLQAQCRGCL 717
+L+ R + L Q R R F + +R V R + F +Q R +
Sbjct: 771 LLEEMRDDXLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFM 821
>pdb|2F6H|X Chain X, Myosin V Cargo Binding Domain
Length = 419
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/151 (19%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Query: 1256 DNIIKFLDSLMRRLRENHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKS 1315
D+I+ F +S+ ++ H+ + ++T + ++++ FN L+++R ++ G +
Sbjct: 205 DDILTFFNSIYWCMKSFHIENEVFHAVVTTLLNYVDAICFNELIMKRNFLSWKRGLQLNY 264
Query: 1316 GLAELEKWIVSAKEEFAGTSWHELNYIRQAVGFLVIHQKRKKSLDEIRQDLCPALTVRQI 1375
+ LE+W K L ++ Q L + + + +D +R +C +LT Q+
Sbjct: 265 NVTRLEEW---CKTHGLTDGTECLQHLIQTAKLLQVRKYTIEDIDILR-GICYSLTPAQL 320
Query: 1376 YRICTMYWDDKYGTQSVSNEVVAQMREILNK 1406
++ + Y Y + + E++ + +I+ K
Sbjct: 321 QKLISQYQVADYES-PIPQEILRYVADIVKK 350
>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 58
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 729 AAAISLQKYVRRWLSRHAFLKLSLAAIVIQSNIRGFSIRERFLHRKRHKAAT 780
AA I +QK +R WL R +L + AAI +Q +RG+ R +R KAAT
Sbjct: 6 AACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAAT 57
>pdb|1ZD1|A Chain A, Human Sulfortransferase Sult4a1
pdb|1ZD1|B Chain B, Human Sulfortransferase Sult4a1
Length = 284
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 442 NSFEQFCINFANEKL-QQHFNEHVFKMEQEEY-RREEINWSYIEFID-NQDVLDLIEKVT 498
+F++FC F N+KL + EHV QE + R + N ++++ D ++D++ ++E++
Sbjct: 156 GTFQEFCRRFMNDKLGYGSWFEHV----QEFWEHRMDSNVLFLKYEDMHRDLVTMVEQLA 211
Query: 499 YQTNTFLDKNRDYVVVEHCNLLSSSKC 525
DK + + EHC+ L C
Sbjct: 212 RFLGVSCDKAQLEALTEHCHQLVDQCC 238
>pdb|3AUZ|A Chain A, Crystal Structure Of Mre11 With Manganese
Length = 333
Score = 31.2 bits (69), Expect = 4.1, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 434 YGFESFKHNSFEQFCINFANEKLQQHFN----------EHVFKMEQEEYRREEINWSYIE 483
Y E F F + + ++++ + FN E +++ E E+Y++E + ++
Sbjct: 189 YELEHFDLPKFSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVD 248
Query: 484 FIDNQDVLDLIEKVTYQTNTFLDKN 508
F N + IEK+ + F++ N
Sbjct: 249 FSGNDLDISDIEKIDIECREFVEVN 273
>pdb|3AV0|A Chain A, Crystal Structure Of Mre11-Rad50 Bound To Atp S
Length = 386
Score = 31.2 bits (69), Expect = 4.2, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 434 YGFESFKHNSFEQFCINFANEKLQQHFN----------EHVFKMEQEEYRREEINWSYIE 483
Y E F F + + ++++ + FN E +++ E E+Y++E + ++
Sbjct: 189 YELEHFDLPKFSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVD 248
Query: 484 FIDNQDVLDLIEKVTYQTNTFLDKN 508
F N + IEK+ + F++ N
Sbjct: 249 FSGNDLDISDIEKIDIECREFVEVN 273
>pdb|2VXR|A Chain A, Crystal Structure Of The Botulinum Neurotoxin Serotype G
Binding Domain
Length = 482
Score = 31.2 bits (69), Expect = 4.8, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 196 LLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLERSRVVQ 245
+++ N+R + NDN R G ++ + D IS + R Y+L S+ +Q
Sbjct: 335 IIKKASNSRNINNDNIVREGDYIYLNIDN---ISDESYRVYVLVNSKEIQ 381
>pdb|1N2D|C Chain C, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 48
Score = 30.8 bits (68), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 749 KLSLAAIVIQSNIRGFSIRERFLHRKRHKAATVIQACWRMCKFRS 793
++S A +Q+NI+GF IR+R + AT++QA +R R+
Sbjct: 1 QISQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRA 45
>pdb|1KCF|A Chain A, Crystal Structure Of The Yeast Mitochondrial Holliday
Junction Resolvase, Ydc2
pdb|1KCF|B Chain B, Crystal Structure Of The Yeast Mitochondrial Holliday
Junction Resolvase, Ydc2
Length = 258
Score = 30.8 bits (68), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Query: 393 ASRDALAKTVYSRLFDWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFA 452
AS++ +K + + +W VE + G LDI E F+ +S I
Sbjct: 57 ASQNEDSKVI---IHNWSVENLTEKNG-----------LDIQWTEDFQPSSMADLSIQLF 102
Query: 453 NEKLQQHFNEHVFKMEQEEYR 473
N L + FN HV ME++ YR
Sbjct: 103 N-TLHEKFNPHVILMERQRYR 122
>pdb|3MPP|G Chain G, Botulinum Neurotoxin Type G Receptor Binding Domain
Length = 433
Score = 30.8 bits (68), Expect = 5.5, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 196 LLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLERSRVVQ 245
+++ N+R + NDN R G ++ + D IS + R Y+L S+ +Q
Sbjct: 286 IIKKASNSRNINNDNIVREGDYIYLNIDN---ISDESYRVYVLVNSKEIQ 332
>pdb|3MMI|A Chain A, Crystal Structure Of The Globular Tail Of Myo4p
pdb|3MMI|B Chain B, Crystal Structure Of The Globular Tail Of Myo4p
Length = 386
Score = 30.4 bits (67), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 9/128 (7%)
Query: 1281 KLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVSAKEEFAGTSWHELN 1340
K+ ++N+ LFN L+ + + G V + L W E+ L
Sbjct: 214 KIFNDTLKYLNVMLFNDLITKCPALNWKYGYEVDRNIERLVSWFEPRIEDVRPN----LI 269
Query: 1341 YIRQAVGFLVIHQKRKKSLDEIRQ--DLCPALTVRQIYRICTMYWDDKYGTQSVSNEVVA 1398
I QAV L Q + +L+E + D AL QI I Y G V NE++
Sbjct: 270 QIIQAVKIL---QLKISNLNEFKLLFDFWYALNPAQIQAILLKYKPANKGEAGVPNEILN 326
Query: 1399 QMREILNK 1406
+ ++ +
Sbjct: 327 YLANVIKR 334
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,755,938
Number of Sequences: 62578
Number of extensions: 1526452
Number of successful extensions: 4434
Number of sequences better than 100.0: 90
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3836
Number of HSP's gapped (non-prelim): 264
length of query: 1463
length of database: 14,973,337
effective HSP length: 111
effective length of query: 1352
effective length of database: 8,027,179
effective search space: 10852746008
effective search space used: 10852746008
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)