Query 000497
Match_columns 1460
No_of_seqs 681 out of 5582
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 10:44:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000497.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000497hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 7E-261 2E-265 2476.7 142.5 1237 203-1459 122-1376(1381)
2 PLN03130 ABC transporter C fam 100.0 6E-211 1E-215 2136.4 166.9 1431 2-1460 7-1476(1622)
3 TIGR00957 MRP_assoc_pro multi 100.0 3E-210 7E-215 2136.1 170.1 1407 17-1460 23-1522(1522)
4 PLN03232 ABC transporter C fam 100.0 7E-207 1E-211 2100.5 166.5 1429 4-1460 9-1473(1495)
5 TIGR01271 CFTR_protein cystic 100.0 2E-195 4E-200 1983.7 148.6 1230 203-1459 3-1453(1490)
6 PTZ00243 ABC transporter; Prov 100.0 2E-185 3E-190 1884.4 150.4 1250 202-1459 58-1547(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 6E-145 1E-149 1366.2 108.8 1156 269-1459 14-1226(1228)
8 PTZ00265 multidrug resistance 100.0 1E-133 3E-138 1361.3 134.3 1163 270-1458 50-1465(1466)
9 KOG0058 Peptide exporter, ABC 100.0 3.2E-88 6.9E-93 810.5 57.5 561 887-1458 135-704 (716)
10 COG2274 SunT ABC-type bacterio 100.0 1.5E-79 3.3E-84 770.4 65.4 543 905-1458 159-708 (709)
11 COG1132 MdlB ABC-type multidru 100.0 9E-77 2E-81 754.6 66.0 542 907-1459 21-565 (567)
12 PRK11174 cysteine/glutathione 100.0 1.5E-75 3.3E-80 747.6 70.2 563 890-1458 13-584 (588)
13 TIGR00958 3a01208 Conjugate Tr 100.0 2.5E-75 5.4E-80 755.6 65.4 540 904-1455 165-711 (711)
14 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.6E-74 3.5E-79 749.2 69.9 540 907-1457 143-684 (686)
15 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.6E-74 7.8E-79 749.3 66.4 541 907-1455 161-709 (710)
16 TIGR01193 bacteriocin_ABC ABC- 100.0 9.7E-74 2.1E-78 744.4 66.2 557 887-1456 144-707 (708)
17 PRK10790 putative multidrug tr 100.0 4.2E-73 9E-78 725.2 70.0 543 905-1458 28-575 (592)
18 PRK11176 lipid transporter ATP 100.0 6.5E-73 1.4E-77 723.0 67.6 544 907-1458 32-579 (582)
19 TIGR03375 type_I_sec_LssB type 100.0 2.1E-72 4.5E-77 730.4 67.6 530 907-1446 154-689 (694)
20 COG4988 CydD ABC-type transpor 100.0 6.1E-72 1.3E-76 660.2 62.0 511 938-1458 38-555 (559)
21 KOG0055 Multidrug/pheromone ex 100.0 8.4E-74 1.8E-78 722.1 47.2 512 938-1458 69-588 (1228)
22 PRK11160 cysteine/glutathione 100.0 1.2E-71 2.6E-76 706.1 67.3 504 946-1457 66-573 (574)
23 TIGR02203 MsbA_lipidA lipid A 100.0 1.5E-71 3.2E-76 709.8 67.9 544 907-1458 21-568 (571)
24 COG2274 SunT ABC-type bacterio 100.0 3.7E-71 8.1E-76 694.7 68.4 543 269-830 143-703 (709)
25 COG4987 CydC ABC-type transpor 100.0 1.9E-71 4E-76 643.1 57.6 499 949-1456 67-571 (573)
26 KOG0058 Peptide exporter, ABC 100.0 1.8E-71 4E-76 666.2 59.5 540 273-830 140-699 (716)
27 TIGR01846 type_I_sec_HlyB type 100.0 5.4E-71 1.2E-75 716.4 68.6 541 910-1458 149-692 (694)
28 KOG0056 Heavy metal exporter H 100.0 4.9E-73 1.1E-77 637.1 37.3 493 954-1457 273-773 (790)
29 PRK11174 cysteine/glutathione 100.0 9.2E-70 2E-74 694.4 69.1 535 270-829 12-578 (588)
30 PRK13657 cyclic beta-1,2-gluca 100.0 1.5E-69 3.2E-74 691.4 70.6 545 905-1459 24-571 (588)
31 TIGR02204 MsbA_rel ABC transpo 100.0 8.4E-70 1.8E-74 694.0 67.8 547 907-1458 25-575 (576)
32 TIGR02868 CydC thiol reductant 100.0 8.4E-70 1.8E-74 686.1 62.0 463 949-1417 62-529 (529)
33 KOG0057 Mitochondrial Fe/S clu 100.0 3.1E-69 6.6E-74 624.7 55.8 505 940-1458 74-586 (591)
34 PRK10789 putative multidrug tr 100.0 6.2E-69 1.3E-73 681.3 63.7 506 941-1457 37-549 (569)
35 TIGR01192 chvA glucan exporter 100.0 5.6E-68 1.2E-72 673.4 69.9 543 906-1459 25-571 (585)
36 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.2E-67 2.6E-72 684.9 70.3 538 269-829 125-679 (686)
37 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.6E-67 3.4E-72 687.0 71.0 544 271-828 145-705 (710)
38 TIGR02857 CydD thiol reductant 100.0 7.2E-68 1.6E-72 668.6 63.7 515 907-1429 10-529 (529)
39 TIGR03375 type_I_sec_LssB type 100.0 5.6E-67 1.2E-71 679.6 72.2 535 270-824 137-689 (694)
40 TIGR00958 3a01208 Conjugate Tr 100.0 1.4E-66 3E-71 674.0 71.6 535 275-828 156-707 (711)
41 TIGR01193 bacteriocin_ABC ABC- 100.0 5.3E-66 1.2E-70 671.8 71.0 535 273-828 149-702 (708)
42 COG1123 ATPase components of v 100.0 1.1E-67 2.5E-72 627.9 46.8 475 606-1457 5-531 (539)
43 TIGR01842 type_I_sec_PrtD type 100.0 6.8E-66 1.5E-70 651.3 65.9 525 907-1445 13-542 (544)
44 PTZ00265 multidrug resistance 100.0 6.1E-66 1.3E-70 701.0 66.3 555 899-1458 59-728 (1466)
45 PRK11176 lipid transporter ATP 100.0 6.4E-65 1.4E-69 649.4 69.5 540 272-830 17-574 (582)
46 COG5265 ATM1 ABC-type transpor 100.0 1.4E-67 3E-72 591.4 37.2 487 963-1456 5-496 (497)
47 TIGR02203 MsbA_lipidA lipid A 100.0 1.4E-64 3E-69 645.7 68.6 535 272-825 6-558 (571)
48 PRK10261 glutathione transport 100.0 6.1E-66 1.3E-70 657.1 50.1 492 604-1456 10-565 (623)
49 PRK10790 putative multidrug tr 100.0 9.4E-64 2E-68 639.0 69.3 532 273-830 16-570 (592)
50 TIGR02868 CydC thiol reductant 100.0 8E-64 1.7E-68 631.8 67.5 504 273-795 6-529 (529)
51 TIGR02204 MsbA_rel ABC transpo 100.0 1.1E-63 2.4E-68 637.6 69.4 541 270-826 8-566 (576)
52 TIGR01846 type_I_sec_HlyB type 100.0 4.2E-63 9.1E-68 642.7 70.3 540 270-829 129-686 (694)
53 PRK11160 cysteine/glutathione 100.0 1E-62 2.2E-67 624.6 68.8 534 274-829 10-568 (574)
54 PRK15134 microcin C ABC transp 100.0 3.8E-65 8.2E-70 641.8 45.6 455 606-1448 5-518 (529)
55 TIGR01842 type_I_sec_PrtD type 100.0 1.2E-62 2.6E-67 621.7 68.1 520 277-823 3-542 (544)
56 PRK13657 cyclic beta-1,2-gluca 100.0 1.7E-62 3.7E-67 626.5 69.5 533 274-830 13-565 (588)
57 PRK13549 xylose transporter AT 100.0 3.4E-65 7.3E-70 638.9 43.4 443 606-1444 5-493 (506)
58 TIGR00956 3a01205 Pleiotropic 100.0 1.1E-63 2.5E-68 678.9 59.3 247 1184-1442 717-990 (1394)
59 PRK10789 putative multidrug tr 100.0 2.1E-62 4.5E-67 621.7 66.6 522 289-829 4-544 (569)
60 TIGR03269 met_CoM_red_A2 methy 100.0 8.3E-65 1.8E-69 638.0 43.4 437 607-1445 1-517 (520)
61 PRK09700 D-allose transporter 100.0 1.7E-64 3.7E-69 633.7 44.9 446 606-1442 5-495 (510)
62 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.5E-62 3.3E-67 620.6 62.3 510 908-1437 26-551 (555)
63 COG1132 MdlB ABC-type multidru 100.0 6E-62 1.3E-66 618.8 67.7 528 278-831 13-560 (567)
64 COG4618 ArpD ABC-type protease 100.0 6.5E-63 1.4E-67 565.9 52.5 530 268-824 11-561 (580)
65 PRK10762 D-ribose transporter 100.0 2.1E-64 4.6E-69 630.9 42.9 436 606-1444 4-483 (501)
66 PLN03232 ABC transporter C fam 100.0 4.2E-62 9E-67 670.7 67.6 548 887-1458 289-840 (1495)
67 TIGR02857 CydD thiol reductant 100.0 1.4E-61 3E-66 611.4 66.8 507 279-807 2-529 (529)
68 TIGR01257 rim_protein retinal- 100.0 1.1E-61 2.4E-66 653.4 68.4 220 1221-1446 1935-2160(2272)
69 PLN03130 ABC transporter C fam 100.0 8.6E-62 1.9E-66 666.6 68.2 546 888-1458 290-840 (1622)
70 PRK15439 autoinducer 2 ABC tra 100.0 6.8E-64 1.5E-68 626.6 43.0 451 605-1446 10-493 (510)
71 COG4988 CydD ABC-type transpor 100.0 3.1E-61 6.6E-66 569.4 62.3 523 286-831 6-551 (559)
72 TIGR02633 xylG D-xylose ABC tr 100.0 1.1E-63 2.4E-68 625.4 43.3 447 607-1443 2-490 (500)
73 TIGR01192 chvA glucan exporter 100.0 1.2E-60 2.5E-65 606.5 70.8 533 274-830 13-565 (585)
74 PRK15064 ABC transporter ATP-b 100.0 1.6E-62 3.4E-67 618.2 52.3 202 1222-1447 318-527 (530)
75 PRK11288 araG L-arabinose tran 100.0 2.6E-63 5.6E-68 621.2 43.2 443 606-1444 4-484 (501)
76 PRK10982 galactose/methyl gala 100.0 1.1E-62 2.3E-67 614.6 43.8 435 610-1444 2-479 (491)
77 PRK11819 putative ABC transpor 100.0 2.8E-61 6.1E-66 608.5 51.4 203 1221-1447 322-535 (556)
78 PRK10522 multidrug transporter 100.0 5E-60 1.1E-64 597.7 62.5 467 954-1444 62-538 (547)
79 PRK10938 putative molybdenum t 100.0 3.8E-62 8.3E-67 609.9 41.2 442 607-1438 4-485 (490)
80 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.5E-60 3.2E-65 602.1 51.9 480 606-1446 4-532 (552)
81 KOG0057 Mitochondrial Fe/S clu 100.0 3.5E-59 7.5E-64 541.1 55.6 514 289-826 39-577 (591)
82 TIGR00957 MRP_assoc_pro multi 100.0 5.9E-59 1.3E-63 640.5 68.2 545 269-829 953-1514(1522)
83 COG4172 ABC-type uncharacteriz 100.0 1.7E-60 3.8E-65 529.4 40.8 460 605-1454 5-525 (534)
84 PRK10636 putative ABC transpor 100.0 2.5E-59 5.3E-64 596.5 52.5 200 1222-1445 311-517 (638)
85 KOG0054 Multidrug resistance-a 100.0 3.2E-58 6.9E-63 595.8 62.7 542 888-1457 190-742 (1381)
86 PLN03140 ABC transporter G fam 100.0 6E-58 1.3E-62 619.3 56.5 211 1223-1441 867-1106(1470)
87 COG4987 CydC ABC-type transpor 100.0 1.2E-56 2.5E-61 520.1 59.0 539 271-830 8-568 (573)
88 PRK11147 ABC transporter ATPas 100.0 1E-57 2.2E-62 583.6 51.9 203 1223-1445 319-528 (635)
89 PTZ00243 ABC transporter; Prov 100.0 2.6E-56 5.6E-61 612.1 68.3 476 348-829 1026-1540(1560)
90 KOG0056 Heavy metal exporter H 100.0 1.9E-58 4.2E-63 519.4 36.9 521 287-829 222-768 (790)
91 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.7E-55 3.7E-60 556.4 62.1 521 274-815 11-551 (555)
92 COG4618 ArpD ABC-type protease 100.0 2.1E-56 4.5E-61 512.4 48.0 486 947-1446 70-561 (580)
93 PLN03073 ABC transporter F fam 100.0 1.7E-56 3.6E-61 570.6 52.0 200 1221-1444 506-713 (718)
94 COG0488 Uup ATPase components 100.0 1.6E-55 3.5E-60 537.0 47.8 484 606-1447 3-527 (530)
95 TIGR01271 CFTR_protein cystic 100.0 1.1E-53 2.3E-58 586.5 68.0 483 340-831 945-1448(1490)
96 PRK13409 putative ATPase RIL; 100.0 5.1E-56 1.1E-60 557.4 38.5 192 1223-1440 340-537 (590)
97 TIGR00954 3a01203 Peroxysomal 100.0 3.5E-54 7.7E-59 551.1 54.9 513 901-1431 97-653 (659)
98 PRK10522 multidrug transporter 100.0 5.2E-53 1.1E-57 533.9 62.7 508 270-815 3-530 (547)
99 COG1129 MglA ABC-type sugar tr 100.0 6.5E-53 1.4E-57 499.1 40.2 442 605-1442 7-487 (500)
100 TIGR00954 3a01203 Peroxysomal 100.0 3E-50 6.5E-55 514.9 60.3 516 281-809 97-653 (659)
101 COG5265 ATM1 ABC-type transpor 100.0 2E-51 4.4E-56 461.4 37.5 466 348-830 10-493 (497)
102 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.1E-52 4.7E-57 478.2 27.3 236 1222-1459 1-238 (275)
103 COG3845 ABC-type uncharacteriz 100.0 1.5E-50 3.4E-55 466.9 37.0 446 605-1442 3-489 (501)
104 PRK14257 phosphate ABC transpo 100.0 6.7E-49 1.4E-53 460.8 27.5 230 1215-1449 72-317 (329)
105 COG1126 GlnQ ABC-type polar am 100.0 1.1E-45 2.5E-50 384.7 22.8 220 1223-1449 2-229 (240)
106 COG1135 AbcC ABC-type metal io 100.0 3.7E-45 8E-50 399.6 21.8 220 1224-1448 2-234 (339)
107 COG1117 PstB ABC-type phosphat 100.0 1.1E-44 2.4E-49 374.8 19.4 220 1222-1448 6-240 (253)
108 cd03288 ABCC_SUR2 The SUR doma 100.0 1E-43 2.2E-48 406.4 29.0 238 1220-1457 16-255 (257)
109 KOG0927 Predicted transporter 100.0 2.5E-43 5.5E-48 407.1 26.6 197 1223-1441 389-592 (614)
110 COG1125 OpuBA ABC-type proline 100.0 1.4E-43 3.1E-48 375.0 20.9 222 1224-1452 2-232 (309)
111 PRK14257 phosphate ABC transpo 100.0 1.5E-43 3.3E-48 415.6 23.2 262 529-823 23-313 (329)
112 cd03252 ABCC_Hemolysin The ABC 100.0 1E-42 2.2E-47 394.0 27.9 232 1224-1456 1-235 (237)
113 cd03244 ABCC_MRP_domain2 Domai 100.0 2.3E-42 5E-47 387.0 26.5 219 1222-1440 1-221 (221)
114 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.1E-41 2.5E-46 377.2 25.6 207 1218-1440 1-207 (207)
115 PRK13631 cbiO cobalt transport 100.0 1.2E-41 2.6E-46 398.5 26.6 223 1220-1447 18-267 (320)
116 TIGR02314 ABC_MetN D-methionin 100.0 1.5E-41 3.3E-46 398.9 26.7 223 1224-1451 2-236 (343)
117 cd03251 ABCC_MsbA MsbA is an e 100.0 2.4E-41 5.3E-46 382.1 26.3 229 1224-1453 1-232 (234)
118 KOG0065 Pleiotropic drug resis 100.0 8.6E-41 1.9E-45 421.8 32.7 199 1236-1442 802-1018(1391)
119 cd03254 ABCC_Glucan_exporter_l 100.0 4.4E-41 9.6E-46 378.7 26.7 225 1222-1447 1-228 (229)
120 COG1126 GlnQ ABC-type polar am 100.0 9.3E-42 2E-46 355.5 18.4 199 607-823 3-225 (240)
121 KOG0062 ATPase component of AB 100.0 3.4E-41 7.4E-46 387.5 24.5 192 1221-1436 360-559 (582)
122 cd03253 ABCC_ATM1_transporter 100.0 9.3E-41 2E-45 377.9 27.6 232 1224-1457 1-235 (236)
123 COG1120 FepC ABC-type cobalami 100.0 1.8E-41 3.8E-46 373.9 20.5 213 1223-1446 2-229 (258)
124 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3.1E-41 6.7E-46 369.7 21.6 210 1223-1447 4-229 (254)
125 COG1124 DppF ABC-type dipeptid 100.0 5.5E-41 1.2E-45 357.7 22.2 226 1223-1456 3-242 (252)
126 COG1127 Ttg2A ABC-type transpo 100.0 5.6E-41 1.2E-45 355.1 21.7 229 1221-1456 6-246 (263)
127 COG3839 MalK ABC-type sugar tr 100.0 7.3E-41 1.6E-45 382.8 24.3 221 1223-1452 3-230 (338)
128 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.5E-40 3.2E-45 376.6 26.6 231 1224-1455 1-235 (238)
129 PRK14250 phosphate ABC transpo 100.0 2.3E-40 4.9E-45 375.2 26.7 226 1223-1456 3-232 (241)
130 COG1122 CbiO ABC-type cobalt t 100.0 1.3E-40 2.8E-45 368.1 22.7 215 1223-1447 3-230 (235)
131 cd03245 ABCC_bacteriocin_expor 100.0 2.9E-40 6.2E-45 369.8 25.7 217 1222-1438 1-220 (220)
132 cd03261 ABC_Org_Solvent_Resist 100.0 2.5E-40 5.4E-45 373.9 25.1 217 1224-1447 1-228 (235)
133 PRK11153 metN DL-methionine tr 100.0 4.2E-40 9.1E-45 389.9 27.6 224 1224-1452 2-237 (343)
134 cd03260 ABC_PstB_phosphate_tra 100.0 2.6E-40 5.6E-45 371.9 22.4 213 1224-1443 1-227 (227)
135 COG3638 ABC-type phosphate/pho 100.0 2.9E-40 6.2E-45 348.8 20.9 220 1223-1455 3-244 (258)
136 COG1136 SalX ABC-type antimicr 100.0 4.6E-40 9.9E-45 355.8 22.8 208 1224-1436 2-222 (226)
137 cd03289 ABCC_CFTR2 The CFTR su 100.0 3E-40 6.6E-45 378.1 22.7 219 606-831 2-233 (275)
138 PRK13637 cbiO cobalt transport 100.0 6.3E-40 1.4E-44 380.2 25.5 218 1224-1446 3-235 (287)
139 PRK14269 phosphate ABC transpo 100.0 9.3E-40 2E-44 371.6 26.2 219 1223-1448 2-233 (246)
140 PRK13650 cbiO cobalt transport 100.0 7.6E-40 1.7E-44 378.3 25.8 220 1223-1447 4-231 (279)
141 cd03219 ABC_Mj1267_LivG_branch 100.0 4.5E-40 9.7E-45 372.3 23.0 222 1224-1447 1-234 (236)
142 PRK11432 fbpC ferric transport 100.0 9.3E-40 2E-44 386.0 26.4 223 1221-1452 4-233 (351)
143 cd03263 ABC_subfamily_A The AB 100.0 4.5E-40 9.7E-45 368.2 22.5 214 1224-1443 1-219 (220)
144 PRK10744 pstB phosphate transp 100.0 1.1E-39 2.3E-44 374.0 25.5 221 1221-1448 11-247 (260)
145 PRK11650 ugpC glycerol-3-phosp 100.0 9.9E-40 2.1E-44 387.0 26.1 222 1223-1452 3-231 (356)
146 TIGR03265 PhnT2 putative 2-ami 100.0 1.2E-39 2.6E-44 385.9 26.3 221 1223-1452 4-231 (353)
147 cd03295 ABC_OpuCA_Osmoprotecti 100.0 8.8E-40 1.9E-44 371.0 24.1 222 1224-1451 1-231 (242)
148 cd03296 ABC_CysA_sulfate_impor 100.0 1.1E-39 2.4E-44 369.4 24.7 216 1224-1448 3-229 (239)
149 PRK13646 cbiO cobalt transport 100.0 1.2E-39 2.5E-44 378.1 25.1 219 1223-1446 2-236 (286)
150 TIGR00972 3a0107s01c2 phosphat 100.0 1.4E-39 3.1E-44 370.5 25.1 221 1224-1451 2-238 (247)
151 cd03224 ABC_TM1139_LivF_branch 100.0 8.6E-40 1.9E-44 366.5 23.0 215 1224-1445 1-221 (222)
152 PRK14273 phosphate ABC transpo 100.0 1.3E-39 2.9E-44 372.3 24.7 223 1222-1451 6-244 (254)
153 COG1135 AbcC ABC-type metal io 100.0 3.1E-40 6.7E-45 361.1 18.3 205 607-823 2-231 (339)
154 PRK13643 cbiO cobalt transport 100.0 1.9E-39 4.2E-44 376.4 25.9 218 1224-1446 2-234 (288)
155 cd03258 ABC_MetN_methionine_tr 100.0 9.3E-40 2E-44 368.9 22.6 219 1224-1447 2-232 (233)
156 cd03248 ABCC_TAP TAP, the Tran 100.0 1.4E-39 3E-44 365.7 23.8 215 1220-1434 8-226 (226)
157 PRK13632 cbiO cobalt transport 100.0 2.1E-39 4.5E-44 373.6 25.6 220 1223-1447 7-233 (271)
158 TIGR01186 proV glycine betaine 100.0 1.3E-39 2.7E-44 384.5 23.9 209 1238-1451 6-225 (363)
159 PRK14242 phosphate transporter 100.0 1.6E-39 3.5E-44 371.5 24.1 219 1223-1448 6-240 (253)
160 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2E-39 4.4E-44 366.6 24.6 215 1224-1446 2-222 (236)
161 PRK14259 phosphate ABC transpo 100.0 2.7E-39 5.9E-44 371.9 26.1 223 1219-1448 9-256 (269)
162 PRK13647 cbiO cobalt transport 100.0 2.3E-39 4.9E-44 373.3 25.2 212 1223-1444 4-226 (274)
163 cd03256 ABC_PhnC_transporter A 100.0 1.3E-39 2.9E-44 369.7 23.0 215 1224-1445 1-234 (241)
164 PRK13635 cbiO cobalt transport 100.0 2.8E-39 6E-44 373.3 25.7 219 1223-1446 5-230 (279)
165 PRK13537 nodulation ABC transp 100.0 1.6E-39 3.5E-44 379.3 24.0 217 1222-1446 6-228 (306)
166 PRK13636 cbiO cobalt transport 100.0 3.3E-39 7.1E-44 373.7 26.1 218 1223-1446 5-232 (283)
167 PRK11629 lolD lipoprotein tran 100.0 3.9E-39 8.4E-44 363.6 26.0 212 1223-1439 5-228 (233)
168 PRK10851 sulfate/thiosulfate t 100.0 4.2E-39 9E-44 381.2 27.4 220 1223-1451 2-232 (353)
169 TIGR02315 ABC_phnC phosphonate 100.0 2.4E-39 5.3E-44 368.0 24.0 220 1224-1444 2-234 (243)
170 COG2884 FtsE Predicted ATPase 100.0 1.4E-39 3E-44 331.2 19.4 207 1224-1440 2-221 (223)
171 PRK14267 phosphate ABC transpo 100.0 2.3E-39 5E-44 370.2 23.7 223 1223-1452 4-244 (253)
172 TIGR03258 PhnT 2-aminoethylpho 100.0 2.5E-39 5.4E-44 383.5 24.5 222 1221-1451 3-234 (362)
173 PRK13634 cbiO cobalt transport 100.0 3E-39 6.5E-44 375.1 24.7 218 1224-1446 3-236 (290)
174 COG4178 ABC-type uncharacteriz 100.0 2E-36 4.4E-41 365.3 49.9 493 915-1431 58-588 (604)
175 COG1116 TauB ABC-type nitrate/ 100.0 1.2E-39 2.6E-44 351.5 19.2 191 606-813 3-212 (248)
176 COG3842 PotA ABC-type spermidi 100.0 1.1E-39 2.3E-44 375.1 19.9 218 1222-1452 4-233 (352)
177 PRK14247 phosphate ABC transpo 100.0 5.1E-39 1.1E-43 366.7 25.3 226 1223-1455 3-244 (250)
178 TIGR00960 3a0501s02 Type II (G 100.0 1.8E-39 4E-44 362.1 21.0 202 1224-1434 2-216 (216)
179 cd03259 ABC_Carb_Solutes_like 100.0 1.9E-39 4.1E-44 361.2 20.9 206 1224-1438 1-213 (213)
180 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.7E-39 3.7E-44 363.0 20.5 206 1224-1434 1-218 (218)
181 PRK13642 cbiO cobalt transport 100.0 5.2E-39 1.1E-43 371.2 25.2 220 1223-1447 4-231 (277)
182 TIGR03411 urea_trans_UrtD urea 100.0 3.5E-39 7.7E-44 366.3 23.3 219 1224-1445 3-231 (242)
183 PRK15079 oligopeptide ABC tran 100.0 4.2E-39 9.1E-44 378.4 24.6 226 1223-1453 8-259 (331)
184 PRK13651 cobalt transporter AT 100.0 7.1E-39 1.5E-43 373.0 26.1 219 1223-1446 2-255 (305)
185 COG4615 PvdE ABC-type sideroph 100.0 2E-36 4.3E-41 336.2 43.8 472 943-1438 51-530 (546)
186 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.8E-38 4E-43 364.7 28.8 217 1221-1455 37-256 (282)
187 PRK09493 glnQ glutamine ABC tr 100.0 8.5E-39 1.8E-43 362.6 25.6 217 1224-1447 2-227 (240)
188 PRK14251 phosphate ABC transpo 100.0 4.5E-39 9.8E-44 367.4 23.5 223 1223-1452 4-242 (251)
189 PRK11264 putative amino-acid A 100.0 1.3E-38 2.8E-43 363.5 27.2 227 1223-1456 3-245 (250)
190 PRK11831 putative ABC transpor 100.0 5.2E-39 1.1E-43 369.8 24.0 227 1223-1456 7-244 (269)
191 cd03218 ABC_YhbG The ABC trans 100.0 3.2E-39 6.9E-44 364.4 21.9 216 1224-1446 1-223 (232)
192 PRK10619 histidine/lysine/argi 100.0 7.6E-39 1.7E-43 366.5 25.2 221 1221-1448 3-244 (257)
193 cd03266 ABC_NatA_sodium_export 100.0 3.6E-39 7.7E-44 360.4 21.8 209 1224-1438 2-218 (218)
194 PRK11000 maltose/maltodextrin 100.0 6.4E-39 1.4E-43 382.8 25.3 220 1223-1451 3-229 (369)
195 cd03247 ABCC_cytochrome_bd The 100.0 4.2E-39 9.2E-44 347.7 21.5 178 1224-1438 1-178 (178)
196 PRK14235 phosphate transporter 100.0 9.5E-39 2.1E-43 367.2 25.7 222 1220-1448 16-254 (267)
197 TIGR03005 ectoine_ehuA ectoine 100.0 1.3E-38 2.8E-43 363.8 26.6 218 1224-1448 1-239 (252)
198 TIGR02211 LolD_lipo_ex lipopro 100.0 4.9E-39 1.1E-43 360.1 22.6 207 1224-1435 2-220 (221)
199 PRK14237 phosphate transporter 100.0 9.2E-39 2E-43 367.4 25.4 220 1222-1448 19-254 (267)
200 COG3840 ThiQ ABC-type thiamine 100.0 4.5E-39 9.9E-44 324.1 19.9 211 1224-1449 2-223 (231)
201 PRK09452 potA putrescine/sperm 100.0 8.4E-39 1.8E-43 380.2 25.8 221 1222-1451 13-240 (375)
202 PRK14245 phosphate ABC transpo 100.0 5.7E-39 1.2E-43 366.2 23.4 220 1223-1449 3-238 (250)
203 COG1116 TauB ABC-type nitrate/ 100.0 7.2E-39 1.6E-43 345.5 22.8 196 1223-1434 3-211 (248)
204 PRK13640 cbiO cobalt transport 100.0 9.8E-39 2.1E-43 369.6 25.5 220 1222-1446 4-233 (282)
205 PRK13648 cbiO cobalt transport 100.0 1E-38 2.3E-43 367.5 25.5 220 1223-1447 7-233 (269)
206 PRK13649 cbiO cobalt transport 100.0 8.1E-39 1.8E-43 370.8 24.7 218 1224-1446 3-235 (280)
207 PRK11308 dppF dipeptide transp 100.0 1E-38 2.2E-43 375.0 25.6 226 1223-1453 5-252 (327)
208 cd03250 ABCC_MRP_domain1 Domai 100.0 7.9E-39 1.7E-43 353.7 23.2 197 1224-1433 1-204 (204)
209 PRK13645 cbiO cobalt transport 100.0 7.9E-39 1.7E-43 372.2 24.3 221 1221-1446 4-241 (289)
210 PRK14262 phosphate ABC transpo 100.0 7.5E-39 1.6E-43 365.4 23.6 225 1223-1454 3-243 (250)
211 PRK14239 phosphate transporter 100.0 7.5E-39 1.6E-43 365.9 23.6 219 1223-1448 5-239 (252)
212 PRK14240 phosphate transporter 100.0 8.9E-39 1.9E-43 364.7 24.1 220 1222-1448 2-237 (250)
213 PRK14268 phosphate ABC transpo 100.0 8.9E-39 1.9E-43 366.0 24.2 223 1222-1451 11-248 (258)
214 PRK14244 phosphate ABC transpo 100.0 6.6E-39 1.4E-43 365.9 23.0 221 1224-1451 6-243 (251)
215 COG1125 OpuBA ABC-type proline 100.0 2E-39 4.2E-44 343.7 17.1 203 607-825 2-227 (309)
216 PRK09536 btuD corrinoid ABC tr 100.0 1.1E-38 2.3E-43 381.1 25.6 220 1223-1455 3-236 (402)
217 PRK14248 phosphate ABC transpo 100.0 1.1E-38 2.5E-43 367.2 24.8 219 1223-1448 21-255 (268)
218 PRK14274 phosphate ABC transpo 100.0 1.3E-38 2.9E-43 365.0 25.0 221 1223-1450 12-248 (259)
219 PRK14256 phosphate ABC transpo 100.0 1.2E-38 2.7E-43 363.8 24.7 222 1221-1449 2-240 (252)
220 PRK14238 phosphate transporter 100.0 2E-38 4.3E-43 365.1 26.6 221 1221-1448 22-258 (271)
221 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.1E-38 2.4E-43 366.9 24.3 221 1225-1452 26-257 (269)
222 cd03264 ABC_drug_resistance_li 100.0 8.6E-39 1.9E-43 355.4 22.5 202 1224-1438 1-211 (211)
223 cd03225 ABC_cobalt_CbiO_domain 100.0 7.1E-39 1.5E-43 356.1 21.8 204 1225-1433 1-211 (211)
224 PRK11124 artP arginine transpo 100.0 2.1E-38 4.6E-43 359.8 26.1 219 1223-1448 2-233 (242)
225 cd03265 ABC_DrrA DrrA is the A 100.0 7.9E-39 1.7E-43 358.0 22.2 208 1224-1443 1-219 (220)
226 PRK13644 cbiO cobalt transport 100.0 1.6E-38 3.6E-43 366.2 25.4 217 1224-1446 2-225 (274)
227 TIGR02769 nickel_nikE nickel i 100.0 1.2E-38 2.5E-43 366.4 24.0 221 1223-1448 2-243 (265)
228 PRK13652 cbiO cobalt transport 100.0 1.6E-38 3.6E-43 367.0 25.3 218 1223-1446 3-228 (277)
229 PRK11607 potG putrescine trans 100.0 2.3E-38 5E-43 377.2 27.2 222 1222-1452 18-246 (377)
230 PRK14236 phosphate transporter 100.0 2E-38 4.3E-43 365.6 25.8 222 1220-1448 22-259 (272)
231 TIGR03410 urea_trans_UrtE urea 100.0 7.2E-39 1.6E-43 360.9 21.7 211 1224-1444 1-220 (230)
232 PRK10895 lipopolysaccharide AB 100.0 1.3E-38 2.8E-43 361.3 23.9 217 1223-1446 3-227 (241)
233 PRK14270 phosphate ABC transpo 100.0 1.7E-38 3.8E-43 362.4 24.9 218 1223-1447 4-237 (251)
234 PRK11614 livF leucine/isoleuci 100.0 1.4E-38 2.9E-43 360.2 23.8 217 1223-1446 5-227 (237)
235 PRK13641 cbiO cobalt transport 100.0 1.8E-38 4E-43 368.3 25.2 219 1223-1446 2-235 (287)
236 PRK09473 oppD oligopeptide tra 100.0 3.4E-38 7.4E-43 370.9 27.6 226 1223-1453 12-259 (330)
237 PRK14260 phosphate ABC transpo 100.0 1.4E-38 3E-43 364.6 23.6 221 1222-1449 6-247 (259)
238 cd03257 ABC_NikE_OppD_transpor 100.0 1.1E-38 2.4E-43 359.2 22.4 211 1224-1438 2-228 (228)
239 PRK14261 phosphate ABC transpo 100.0 1.8E-38 3.9E-43 362.8 24.3 226 1223-1455 6-247 (253)
240 PRK14266 phosphate ABC transpo 100.0 1.8E-38 3.9E-43 362.2 24.2 222 1223-1451 3-240 (250)
241 cd03226 ABC_cobalt_CbiO_domain 100.0 9.9E-39 2.1E-43 353.2 21.2 198 1225-1435 1-205 (205)
242 PRK14249 phosphate ABC transpo 100.0 2.1E-38 4.5E-43 361.8 24.5 220 1222-1448 3-238 (251)
243 TIGR01288 nodI ATP-binding ABC 100.0 1.5E-38 3.2E-43 372.0 23.8 216 1223-1446 4-225 (303)
244 PRK13633 cobalt transporter AT 100.0 2.3E-38 5.1E-43 366.3 25.2 219 1223-1446 4-234 (280)
245 PRK11022 dppD dipeptide transp 100.0 3.1E-38 6.8E-43 371.0 26.5 226 1223-1453 3-251 (326)
246 TIGR03522 GldA_ABC_ATP gliding 100.0 1.8E-38 3.9E-43 370.6 24.3 215 1224-1446 3-222 (301)
247 PRK14252 phosphate ABC transpo 100.0 2.3E-38 5E-43 364.0 24.6 223 1218-1447 11-251 (265)
248 PRK13536 nodulation factor exp 100.0 1.8E-38 3.9E-43 373.9 24.2 216 1223-1446 41-262 (340)
249 cd03293 ABC_NrtD_SsuB_transpor 100.0 9.5E-39 2.1E-43 357.3 20.8 207 1224-1440 1-218 (220)
250 PRK14254 phosphate ABC transpo 100.0 3.3E-38 7.2E-43 365.2 25.7 220 1222-1448 38-272 (285)
251 PRK14243 phosphate transporter 100.0 3E-38 6.4E-43 362.5 25.1 219 1223-1448 10-251 (264)
252 cd03301 ABC_MalK_N The N-termi 100.0 1.3E-38 2.9E-43 354.5 21.6 206 1224-1438 1-213 (213)
253 PRK10070 glycine betaine trans 100.0 2.7E-38 5.9E-43 377.3 25.5 208 1239-1451 42-260 (400)
254 cd03268 ABC_BcrA_bacitracin_re 100.0 9.7E-39 2.1E-43 354.1 20.1 202 1224-1438 1-208 (208)
255 TIGR00968 3a0106s01 sulfate AB 100.0 3.4E-38 7.4E-43 356.5 24.8 215 1224-1447 1-222 (237)
256 PRK14271 phosphate ABC transpo 100.0 1.1E-37 2.3E-42 359.6 29.3 219 1223-1448 21-254 (276)
257 COG1120 FepC ABC-type cobalami 100.0 1E-38 2.2E-43 352.0 19.8 201 606-823 2-228 (258)
258 PRK11701 phnK phosphonate C-P 100.0 6.6E-38 1.4E-42 359.0 27.3 225 1223-1454 6-250 (258)
259 cd03292 ABC_FtsE_transporter F 100.0 1.4E-38 3.1E-43 354.6 21.1 205 1224-1434 1-214 (214)
260 PRK11231 fecE iron-dicitrate t 100.0 2.5E-38 5.4E-43 361.9 23.5 216 1224-1446 3-228 (255)
261 PRK13639 cbiO cobalt transport 100.0 3.9E-38 8.4E-43 363.6 25.2 217 1224-1446 2-227 (275)
262 PRK10575 iron-hydroxamate tran 100.0 2.5E-38 5.4E-43 363.6 23.4 213 1223-1446 11-238 (265)
263 PRK13638 cbiO cobalt transport 100.0 3.3E-38 7.2E-43 363.8 23.9 217 1224-1447 2-227 (271)
264 cd03246 ABCC_Protease_Secretio 100.0 2.6E-38 5.7E-43 339.7 21.5 172 1224-1434 1-173 (173)
265 PRK11300 livG leucine/isoleuci 100.0 4.2E-38 9.2E-43 360.4 24.4 220 1223-1446 5-244 (255)
266 TIGR03415 ABC_choXWV_ATP choli 100.0 3.6E-38 7.8E-43 373.5 24.5 208 1239-1451 38-260 (382)
267 PRK14241 phosphate transporter 100.0 4E-38 8.6E-43 360.8 23.9 219 1223-1448 4-245 (258)
268 PRK14253 phosphate ABC transpo 100.0 4.1E-38 9E-43 359.0 23.9 219 1223-1448 3-236 (249)
269 PRK14275 phosphate ABC transpo 100.0 4.2E-38 9.1E-43 364.8 24.2 224 1221-1451 37-276 (286)
270 PRK14272 phosphate ABC transpo 100.0 4.4E-38 9.6E-43 359.6 24.0 224 1223-1453 4-244 (252)
271 cd03250 ABCC_MRP_domain1 Domai 100.0 3.8E-38 8.3E-43 348.2 22.7 204 607-811 1-204 (204)
272 PRK14264 phosphate ABC transpo 100.0 4.9E-38 1.1E-42 367.3 24.7 220 1221-1447 43-291 (305)
273 PRK10253 iron-enterobactin tra 100.0 4.8E-38 1E-42 361.2 24.2 217 1222-1445 6-233 (265)
274 PRK14263 phosphate ABC transpo 100.0 6E-38 1.3E-42 359.0 24.5 222 1223-1451 8-251 (261)
275 cd03269 ABC_putative_ATPase Th 100.0 2E-38 4.3E-43 352.2 19.9 204 1224-1438 1-210 (210)
276 PRK11247 ssuB aliphatic sulfon 100.0 6.8E-38 1.5E-42 356.5 24.7 204 1222-1441 11-219 (257)
277 cd03300 ABC_PotA_N PotA is an 100.0 5.1E-38 1.1E-42 354.1 23.3 217 1224-1448 1-223 (232)
278 PRK13548 hmuV hemin importer A 100.0 7.5E-38 1.6E-42 357.9 25.0 217 1223-1446 2-231 (258)
279 COG1131 CcmA ABC-type multidru 100.0 2.9E-38 6.2E-43 365.1 21.7 213 1223-1446 4-227 (293)
280 TIGR02673 FtsE cell division A 100.0 2.8E-38 6.2E-43 352.1 20.9 200 1224-1433 2-214 (214)
281 PRK14265 phosphate ABC transpo 100.0 6.3E-38 1.4E-42 361.3 24.4 221 1221-1448 18-261 (274)
282 PRK15112 antimicrobial peptide 100.0 1.2E-37 2.7E-42 358.0 26.7 225 1223-1456 4-251 (267)
283 PRK10908 cell division protein 100.0 9.1E-38 2E-42 349.9 24.8 206 1224-1435 2-216 (222)
284 PRK10584 putative ABC transpor 100.0 6E-38 1.3E-42 353.0 23.5 211 1222-1437 5-227 (228)
285 PRK14258 phosphate ABC transpo 100.0 8.1E-38 1.8E-42 358.5 24.7 221 1222-1449 6-249 (261)
286 PRK15093 antimicrobial peptide 100.0 5.8E-38 1.2E-42 370.1 24.1 226 1223-1453 3-256 (330)
287 cd03298 ABC_ThiQ_thiamine_tran 100.0 6.5E-38 1.4E-42 348.3 23.1 200 1224-1438 1-211 (211)
288 PRK14255 phosphate ABC transpo 100.0 7.1E-38 1.5E-42 357.7 24.0 222 1223-1451 5-242 (252)
289 COG1127 Ttg2A ABC-type transpo 100.0 5E-38 1.1E-42 332.8 20.7 204 604-825 6-237 (263)
290 TIGR03873 F420-0_ABC_ATP propo 100.0 8E-38 1.7E-42 357.9 24.1 215 1224-1445 2-226 (256)
291 cd03290 ABCC_SUR1_N The SUR do 100.0 7.9E-38 1.7E-42 349.4 23.4 208 1225-1433 2-218 (218)
292 COG3840 ThiQ ABC-type thiamine 100.0 2.8E-38 6.2E-43 318.4 17.7 199 607-824 2-220 (231)
293 PRK14246 phosphate ABC transpo 100.0 1.8E-37 3.8E-42 354.2 26.2 227 1222-1455 9-251 (257)
294 COG3839 MalK ABC-type sugar tr 100.0 3.9E-38 8.4E-43 360.4 20.6 202 606-824 3-224 (338)
295 cd03299 ABC_ModC_like Archeal 100.0 2.1E-37 4.6E-42 349.6 26.3 214 1224-1447 1-221 (235)
296 PRK10247 putative ABC transpor 100.0 4.6E-38 1E-42 352.6 20.7 211 1223-1441 7-223 (225)
297 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 7.5E-38 1.6E-42 343.1 21.8 200 605-823 3-227 (254)
298 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.9E-37 4.2E-42 356.3 26.2 213 602-823 35-247 (282)
299 cd03262 ABC_HisP_GlnQ_permease 100.0 5.1E-38 1.1E-42 349.9 20.6 204 1224-1434 1-213 (213)
300 cd03235 ABC_Metallic_Cations A 100.0 4.3E-38 9.3E-43 350.3 20.0 201 1225-1438 1-213 (213)
301 COG1118 CysA ABC-type sulfate/ 100.0 3.4E-38 7.4E-43 343.9 18.5 216 1223-1451 2-233 (345)
302 TIGR01188 drrA daunorubicin re 100.0 6.6E-38 1.4E-42 366.3 22.2 207 1232-1446 2-214 (302)
303 PRK10771 thiQ thiamine transpo 100.0 2E-37 4.3E-42 349.4 25.2 209 1224-1447 2-221 (232)
304 PRK13547 hmuV hemin importer A 100.0 1.3E-37 2.8E-42 357.2 24.0 220 1224-1445 2-244 (272)
305 COG1136 SalX ABC-type antimicr 100.0 1.1E-37 2.4E-42 337.3 21.1 195 607-813 2-221 (226)
306 COG0410 LivF ABC-type branched 100.0 2E-37 4.4E-42 328.4 21.8 220 1223-1448 3-229 (237)
307 COG1117 PstB ABC-type phosphat 100.0 3.1E-38 6.8E-43 327.0 15.2 205 604-823 5-237 (253)
308 TIGR01978 sufC FeS assembly AT 100.0 1.6E-37 3.4E-42 353.2 22.4 215 1224-1445 1-234 (243)
309 PRK10418 nikD nickel transport 100.0 3.8E-37 8.1E-42 351.7 25.6 220 1223-1456 4-242 (254)
310 cd03252 ABCC_Hemolysin The ABC 100.0 3E-37 6.5E-42 349.4 24.1 212 607-824 1-226 (237)
311 PRK10419 nikE nickel transport 100.0 3E-37 6.5E-42 354.8 24.3 231 1223-1456 3-251 (268)
312 COG4555 NatA ABC-type Na+ tran 100.0 4E-38 8.7E-43 322.8 14.9 217 1224-1447 2-224 (245)
313 cd03234 ABCG_White The White s 100.0 1.7E-37 3.6E-42 348.6 20.8 212 1224-1438 4-226 (226)
314 PRK11248 tauB taurine transpor 100.0 2.8E-37 6E-42 352.2 22.7 205 1224-1440 2-215 (255)
315 TIGR02323 CP_lyasePhnK phospho 100.0 4.6E-37 9.9E-42 351.3 24.5 226 1223-1455 3-248 (253)
316 PRK11144 modC molybdate transp 100.0 3.7E-37 8E-42 366.1 24.4 212 1224-1449 2-222 (352)
317 TIGR01277 thiQ thiamine ABC tr 100.0 3.7E-37 8E-42 342.6 22.9 201 1224-1439 1-212 (213)
318 COG3842 PotA ABC-type spermidi 100.0 9.2E-38 2E-42 359.2 18.4 203 605-824 4-227 (352)
319 COG1118 CysA ABC-type sulfate/ 100.0 1E-37 2.2E-42 340.3 17.5 200 607-824 3-228 (345)
320 TIGR02142 modC_ABC molybdenum 100.0 3.9E-37 8.5E-42 366.5 24.3 215 1228-1451 4-227 (354)
321 TIGR02982 heterocyst_DevA ABC 100.0 2.4E-37 5.3E-42 345.8 20.8 206 1224-1434 2-219 (220)
322 PRK09984 phosphonate/organopho 100.0 5.6E-37 1.2E-41 352.1 24.3 224 1223-1456 4-250 (262)
323 cd03254 ABCC_Glucan_exporter_l 100.0 6.1E-37 1.3E-41 345.1 24.1 211 606-823 2-226 (229)
324 COG1137 YhbG ABC-type (unclass 100.0 3.2E-38 6.8E-43 323.3 12.0 225 1222-1448 3-231 (243)
325 cd03288 ABCC_SUR2 The SUR doma 100.0 1.1E-36 2.3E-41 348.5 25.5 214 604-823 17-243 (257)
326 cd03244 ABCC_MRP_domain2 Domai 100.0 1.1E-36 2.4E-41 341.1 23.9 206 606-817 2-220 (221)
327 cd03251 ABCC_MsbA MsbA is an e 100.0 1.2E-36 2.6E-41 343.8 24.1 212 607-824 1-226 (234)
328 cd03228 ABCC_MRP_Like The MRP 100.0 7.7E-37 1.7E-41 327.7 21.1 171 1224-1433 1-171 (171)
329 COG1122 CbiO ABC-type cobalt t 100.0 4.1E-37 8.8E-42 340.4 19.3 203 606-824 3-229 (235)
330 TIGR03740 galliderm_ABC gallid 100.0 1.1E-36 2.3E-41 341.5 22.4 204 1224-1442 1-210 (223)
331 cd03253 ABCC_ATM1_transporter 100.0 2.2E-36 4.9E-41 342.1 24.0 209 608-823 2-224 (236)
332 cd03217 ABC_FeS_Assembly ABC-t 100.0 1.7E-36 3.8E-41 333.4 22.4 185 1224-1444 1-192 (200)
333 cd03297 ABC_ModC_molybdenum_tr 100.0 1.5E-36 3.3E-41 338.0 21.8 204 1224-1438 2-214 (214)
334 cd03230 ABC_DR_subfamily_A Thi 100.0 1.5E-36 3.3E-41 326.1 21.0 170 1224-1434 1-173 (173)
335 COG0444 DppD ABC-type dipeptid 100.0 4.2E-36 9.2E-41 334.9 25.1 224 1224-1455 2-253 (316)
336 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.5E-36 5.5E-41 342.0 23.8 211 608-823 2-226 (238)
337 cd03229 ABC_Class3 This class 100.0 1.8E-36 3.9E-41 327.0 21.3 172 1224-1433 1-178 (178)
338 TIGR01186 proV glycine betaine 100.0 7.4E-37 1.6E-41 361.1 19.2 188 626-824 7-220 (363)
339 COG3638 ABC-type phosphate/pho 100.0 8.9E-37 1.9E-41 322.4 17.7 202 605-822 2-236 (258)
340 COG1124 DppF ABC-type dipeptid 100.0 1.6E-36 3.4E-41 323.7 19.6 207 606-824 3-232 (252)
341 PRK09544 znuC high-affinity zi 100.0 3.9E-36 8.4E-41 341.5 24.0 208 1223-1455 4-217 (251)
342 cd03233 ABC_PDR_domain1 The pl 100.0 2.4E-36 5.2E-41 332.6 21.3 190 1223-1438 3-202 (202)
343 PRK11650 ugpC glycerol-3-phosp 100.0 2.5E-36 5.5E-41 357.9 22.5 202 606-824 3-225 (356)
344 COG4178 ABC-type uncharacteriz 100.0 4.6E-33 9.9E-38 336.4 50.6 450 339-809 105-588 (604)
345 cd03245 ABCC_bacteriocin_expor 100.0 5.9E-36 1.3E-40 335.0 23.9 205 606-816 2-220 (220)
346 cd03215 ABC_Carb_Monos_II This 100.0 2.1E-36 4.7E-41 327.7 19.6 172 1223-1434 4-182 (182)
347 PRK15056 manganese/iron transp 100.0 4.7E-36 1E-40 345.9 23.5 209 1223-1445 6-230 (272)
348 PRK00349 uvrA excinuclease ABC 100.0 2E-35 4.3E-40 381.3 31.9 226 1223-1455 614-937 (943)
349 cd03213 ABCG_EPDR ABCG transpo 100.0 2.7E-36 5.8E-41 330.1 20.1 182 1223-1438 3-194 (194)
350 CHL00131 ycf16 sulfate ABC tra 100.0 7.2E-36 1.6E-40 341.3 23.7 217 1223-1443 7-239 (252)
351 TIGR02314 ABC_MetN D-methionin 100.0 2.8E-36 6E-41 354.5 20.9 203 607-823 2-230 (343)
352 cd03214 ABC_Iron-Siderophores_ 100.0 3.2E-36 6.9E-41 325.7 19.5 177 1225-1438 1-180 (180)
353 PRK13631 cbiO cobalt transport 100.0 4.8E-36 1E-40 351.3 22.5 209 603-823 18-265 (320)
354 PRK03695 vitamin B12-transport 100.0 5.9E-36 1.3E-40 340.3 22.6 210 1225-1446 2-223 (248)
355 cd03232 ABC_PDR_domain2 The pl 100.0 3E-36 6.5E-41 329.3 19.3 181 1223-1438 3-192 (192)
356 cd03223 ABCD_peroxisomal_ALDP 100.0 5.4E-36 1.2E-40 319.1 20.4 163 1224-1432 1-163 (166)
357 TIGR02770 nickel_nikD nickel i 100.0 6E-36 1.3E-40 336.8 21.8 207 1240-1453 1-223 (230)
358 TIGR03608 L_ocin_972_ABC putat 100.0 2.6E-36 5.7E-41 334.3 18.6 197 1226-1429 1-206 (206)
359 cd03290 ABCC_SUR1_N The SUR do 100.0 9.6E-36 2.1E-40 332.6 22.1 199 608-811 2-218 (218)
360 PRK09580 sufC cysteine desulfu 100.0 1E-35 2.2E-40 339.3 22.8 215 1224-1443 2-233 (248)
361 PRK11432 fbpC ferric transport 100.0 8.3E-36 1.8E-40 352.5 22.5 202 605-824 5-227 (351)
362 TIGR01184 ntrCD nitrate transp 100.0 5.7E-36 1.2E-40 336.7 18.9 194 1241-1444 1-203 (230)
363 COG1123 ATPase components of v 100.0 2.1E-35 4.6E-40 352.3 24.6 228 1223-1455 5-254 (539)
364 cd03267 ABC_NatA_like Similar 100.0 7.9E-36 1.7E-40 336.9 19.8 195 1238-1438 34-236 (236)
365 cd03261 ABC_Org_Solvent_Resist 100.0 8.7E-36 1.9E-40 336.9 20.2 198 608-823 2-226 (235)
366 COG0411 LivG ABC-type branched 100.0 4.8E-36 1E-40 320.3 16.6 221 1224-1448 5-242 (250)
367 COG4619 ABC-type uncharacteriz 100.0 3.5E-36 7.6E-41 299.0 14.3 197 1232-1436 10-214 (223)
368 PRK09452 potA putrescine/sperm 100.0 1.7E-35 3.7E-40 352.0 22.7 202 605-824 13-235 (375)
369 COG4615 PvdE ABC-type sideroph 100.0 6.9E-33 1.5E-37 308.1 41.3 507 270-815 3-529 (546)
370 PRK13549 xylose transporter AT 100.0 2.3E-35 5E-40 369.8 24.3 216 1223-1445 5-232 (506)
371 PRK15439 autoinducer 2 ABC tra 100.0 4.2E-35 9E-40 367.2 26.5 215 1223-1445 11-229 (510)
372 TIGR03265 PhnT2 putative 2-ami 100.0 1.5E-35 3.3E-40 350.9 21.1 202 606-824 4-225 (353)
373 COG4175 ProV ABC-type proline/ 100.0 1.4E-35 3E-40 323.0 18.9 218 1223-1449 4-258 (386)
374 PRK13650 cbiO cobalt transport 100.0 2.3E-35 5E-40 341.0 21.2 204 606-824 4-230 (279)
375 PRK13637 cbiO cobalt transport 100.0 2.6E-35 5.6E-40 341.7 21.7 207 606-823 2-234 (287)
376 PRK13643 cbiO cobalt transport 100.0 2.3E-35 4.9E-40 342.4 21.2 205 607-823 2-233 (288)
377 PRK13634 cbiO cobalt transport 100.0 2.5E-35 5.3E-40 342.4 21.4 206 606-823 2-235 (290)
378 COG2884 FtsE Predicted ATPase 100.0 1.4E-35 2.9E-40 302.1 16.7 193 607-816 2-219 (223)
379 PRK13538 cytochrome c biogenes 100.0 2.5E-35 5.5E-40 325.5 20.3 194 1224-1429 2-202 (204)
380 cd03216 ABC_Carb_Monos_I This 100.0 5.3E-35 1.2E-39 310.5 21.8 159 1224-1436 1-162 (163)
381 PRK10851 sulfate/thiosulfate t 100.0 3.5E-35 7.6E-40 347.8 22.4 201 606-824 2-227 (353)
382 PRK09700 D-allose transporter 100.0 4.2E-35 9.1E-40 368.1 24.5 216 1223-1445 5-234 (510)
383 cd03296 ABC_CysA_sulfate_impor 100.0 4.2E-35 9E-40 332.1 22.1 199 606-822 2-225 (239)
384 PRK10762 D-ribose transporter 100.0 4.6E-35 1E-39 366.6 24.3 216 1223-1445 4-230 (501)
385 PRK13646 cbiO cobalt transport 100.0 3.4E-35 7.5E-40 340.7 21.4 206 606-823 2-235 (286)
386 cd03369 ABCC_NFT1 Domain 2 of 100.0 6.9E-35 1.5E-39 323.0 22.8 189 605-817 5-206 (207)
387 cd03260 ABC_PstB_phosphate_tra 100.0 2.4E-35 5.1E-40 331.6 19.4 197 607-820 1-226 (227)
388 TIGR03258 PhnT 2-aminoethylpho 100.0 2.8E-35 6E-40 349.0 20.7 202 605-824 4-229 (362)
389 PRK11000 maltose/maltodextrin 100.0 3.4E-35 7.4E-40 350.8 21.6 200 606-823 3-223 (369)
390 PRK14269 phosphate ABC transpo 100.0 4.7E-35 1E-39 333.0 21.1 203 606-823 2-230 (246)
391 cd03248 ABCC_TAP TAP, the Tran 100.0 6.9E-35 1.5E-39 327.7 22.2 205 603-812 8-226 (226)
392 PRK13651 cobalt transporter AT 100.0 5E-35 1.1E-39 340.7 21.7 206 606-823 2-254 (305)
393 PRK13647 cbiO cobalt transport 100.0 4E-35 8.7E-40 338.1 20.6 199 606-821 4-225 (274)
394 cd03259 ABC_Carb_Solutes_like 100.0 3E-35 6.6E-40 327.4 18.9 191 608-816 2-213 (213)
395 cd03231 ABC_CcmA_heme_exporter 100.0 8.9E-35 1.9E-39 320.2 21.7 194 1224-1429 1-198 (201)
396 cd03219 ABC_Mj1267_LivG_branch 100.0 3.8E-35 8.2E-40 332.1 19.1 198 608-823 2-232 (236)
397 PRK00635 excinuclease ABC subu 100.0 1.1E-33 2.3E-38 377.5 35.6 211 1223-1446 600-907 (1809)
398 PRK14242 phosphate transporter 100.0 7.7E-35 1.7E-39 332.9 21.3 204 605-823 5-237 (253)
399 PRK14250 phosphate ABC transpo 100.0 1.2E-34 2.5E-39 328.6 22.5 201 606-823 3-221 (241)
400 cd03265 ABC_DrrA DrrA is the A 100.0 5.3E-35 1.1E-39 327.1 19.3 197 607-821 1-219 (220)
401 TIGR00960 3a0501s02 Type II (G 100.0 3.5E-35 7.7E-40 327.6 17.9 190 607-812 2-216 (216)
402 PRK11607 potG putrescine trans 100.0 8.8E-35 1.9E-39 346.5 22.3 204 604-824 17-240 (377)
403 PRK11288 araG L-arabinose tran 100.0 1.1E-34 2.4E-39 363.2 24.2 211 1223-1440 4-224 (501)
404 PRK13635 cbiO cobalt transport 100.0 1.3E-34 2.9E-39 334.4 22.8 202 606-823 5-229 (279)
405 COG1245 Predicted ATPase, RNas 100.0 4.3E-34 9.3E-39 323.4 26.3 177 1247-1445 363-547 (591)
406 cd03293 ABC_NrtD_SsuB_transpor 100.0 6.6E-35 1.4E-39 326.3 19.7 197 608-818 2-218 (220)
407 cd03226 ABC_cobalt_CbiO_domain 100.0 5.7E-35 1.2E-39 323.1 18.9 188 609-813 2-205 (205)
408 TIGR02315 ABC_phnC phosphonate 100.0 8.8E-35 1.9E-39 330.6 20.8 198 607-821 2-233 (243)
409 PRK10261 glutathione transport 100.0 1.7E-34 3.6E-39 368.7 25.6 221 1223-1448 12-261 (623)
410 PRK14273 phosphate ABC transpo 100.0 1.3E-34 2.8E-39 331.1 22.2 204 605-823 6-238 (254)
411 PRK10982 galactose/methyl gala 100.0 9.7E-35 2.1E-39 363.1 23.0 212 1226-1444 1-222 (491)
412 PRK13540 cytochrome c biogenes 100.0 9E-35 1.9E-39 320.1 20.0 193 1224-1428 2-198 (200)
413 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7.1E-35 1.5E-39 335.3 19.8 186 626-823 38-250 (269)
414 PRK11153 metN DL-methionine tr 100.0 8.4E-35 1.8E-39 344.7 20.9 204 607-824 2-231 (343)
415 PRK13537 nodulation ABC transp 100.0 1E-34 2.3E-39 338.9 21.3 202 605-824 6-228 (306)
416 PRK13644 cbiO cobalt transport 100.0 1.2E-34 2.6E-39 334.1 21.6 200 607-823 2-224 (274)
417 TIGR01257 rim_protein retinal- 100.0 1.3E-34 2.7E-39 392.3 24.9 220 1222-1447 927-1151(2272)
418 PRK15134 microcin C ABC transp 100.0 3.9E-34 8.4E-39 360.6 27.7 221 1223-1448 5-249 (529)
419 cd03268 ABC_BcrA_bacitracin_re 100.0 1.3E-34 2.7E-39 321.2 20.3 192 607-816 1-208 (208)
420 cd03256 ABC_PhnC_transporter A 100.0 1.1E-34 2.4E-39 329.4 20.4 197 608-821 2-232 (241)
421 TIGR00972 3a0107s01c2 phosphat 100.0 1.3E-34 2.9E-39 329.6 21.1 202 607-823 2-232 (247)
422 PRK11629 lolD lipoprotein tran 100.0 1.5E-34 3.3E-39 326.2 21.0 198 606-817 5-228 (233)
423 cd03263 ABC_subfamily_A The AB 100.0 1.2E-34 2.6E-39 324.4 19.9 198 607-821 1-219 (220)
424 PRK13543 cytochrome c biogenes 100.0 1.8E-34 3.8E-39 321.1 21.0 195 1223-1431 11-212 (214)
425 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.7E-34 3.8E-39 326.4 21.2 200 607-824 2-222 (236)
426 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 9E-35 1.9E-39 324.9 18.6 191 608-812 2-218 (218)
427 PRK10744 pstB phosphate transp 100.0 2.2E-34 4.8E-39 330.1 22.3 206 603-823 10-244 (260)
428 COG4598 HisP ABC-type histidin 100.0 5.1E-35 1.1E-39 293.2 14.4 219 1223-1449 6-245 (256)
429 TIGR00630 uvra excinuclease AB 100.0 2E-33 4.3E-38 362.2 33.1 214 1223-1443 612-923 (924)
430 PRK10938 putative molybdenum t 100.0 1.9E-34 4.2E-39 360.5 23.2 212 1223-1446 3-225 (490)
431 TIGR02633 xylG D-xylose ABC tr 100.0 2.6E-34 5.6E-39 360.3 24.1 214 1224-1444 2-229 (500)
432 cd03258 ABC_MetN_methionine_tr 100.0 1.9E-34 4.1E-39 325.6 20.6 202 607-822 2-229 (233)
433 PRK11247 ssuB aliphatic sulfon 100.0 2.8E-34 6.2E-39 326.8 22.1 197 605-819 11-219 (257)
434 cd03224 ABC_TM1139_LivF_branch 100.0 1.8E-34 3.8E-39 323.5 20.1 199 607-822 1-220 (222)
435 PRK13546 teichoic acids export 100.0 5.4E-34 1.2E-38 325.6 24.3 214 1223-1454 4-241 (264)
436 cd03301 ABC_MalK_N The N-termi 100.0 1.4E-34 3E-39 322.2 18.9 192 607-816 1-213 (213)
437 COG4608 AppF ABC-type oligopep 100.0 1.6E-34 3.5E-39 316.0 18.9 196 1223-1455 4-209 (268)
438 cd03235 ABC_Metallic_Cations A 100.0 1.4E-34 3.1E-39 322.0 18.9 188 609-815 2-212 (213)
439 PRK13633 cobalt transporter AT 100.0 3.4E-34 7.3E-39 331.7 22.4 206 606-823 4-233 (280)
440 PRK10535 macrolide transporter 100.0 2.6E-34 5.7E-39 368.0 23.8 217 1223-1444 4-231 (648)
441 TIGR01288 nodI ATP-binding ABC 100.0 2.5E-34 5.5E-39 336.3 21.6 202 605-824 3-225 (303)
442 COG4559 ABC-type hemin transpo 100.0 2.2E-34 4.8E-39 297.6 18.5 213 1224-1447 2-232 (259)
443 PRK13640 cbiO cobalt transport 100.0 3E-34 6.5E-39 332.2 21.9 203 605-823 4-232 (282)
444 cd03264 ABC_drug_resistance_li 100.0 1.5E-34 3.3E-39 321.3 18.6 190 607-816 1-211 (211)
445 PRK09536 btuD corrinoid ABC tr 100.0 2.4E-34 5.2E-39 343.7 21.4 200 606-823 3-228 (402)
446 cd03218 ABC_YhbG The ABC trans 100.0 2.1E-34 4.7E-39 325.1 19.8 197 608-822 2-221 (232)
447 PRK14237 phosphate transporter 100.0 3.6E-34 7.9E-39 329.3 22.0 207 602-823 16-251 (267)
448 PRK14235 phosphate transporter 100.0 3.7E-34 8.1E-39 329.2 21.9 205 603-822 16-250 (267)
449 cd03247 ABCC_cytochrome_bd The 100.0 3E-34 6.5E-39 309.9 19.7 166 607-816 1-178 (178)
450 cd03266 ABC_NatA_sodium_export 100.0 2.4E-34 5.1E-39 321.5 19.6 196 607-816 2-218 (218)
451 PRK13636 cbiO cobalt transport 100.0 3.9E-34 8.4E-39 331.4 21.9 201 606-823 5-231 (283)
452 PRK13641 cbiO cobalt transport 100.0 3.4E-34 7.4E-39 332.6 21.4 206 606-823 2-234 (287)
453 PRK13632 cbiO cobalt transport 100.0 5.2E-34 1.1E-38 328.7 22.7 203 605-823 6-231 (271)
454 PRK14245 phosphate ABC transpo 100.0 2.8E-34 6E-39 327.6 20.2 203 606-823 3-234 (250)
455 PRK14274 phosphate ABC transpo 100.0 4.7E-34 1E-38 327.4 22.1 204 605-823 11-243 (259)
456 TIGR02211 LolD_lipo_ex lipopro 100.0 2.7E-34 5.9E-39 321.7 19.8 193 607-813 2-220 (221)
457 PRK11831 putative ABC transpor 100.0 5E-34 1.1E-38 328.5 22.3 201 605-823 6-233 (269)
458 PRK13536 nodulation factor exp 100.0 3.1E-34 6.7E-39 338.1 20.9 203 604-824 39-262 (340)
459 PRK13539 cytochrome c biogenes 100.0 3.8E-34 8.2E-39 316.7 20.3 194 1223-1431 2-200 (207)
460 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.6E-34 7.9E-39 318.3 20.2 190 607-816 1-211 (211)
461 PRK14259 phosphate ABC transpo 100.0 5.8E-34 1.3E-38 327.7 22.4 205 604-823 11-253 (269)
462 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.5E-34 7.7E-39 325.1 20.2 200 608-822 2-224 (242)
463 PLN03211 ABC transporter G-25; 100.0 7.5E-34 1.6E-38 361.5 25.3 199 1238-1445 81-296 (659)
464 PRK14268 phosphate ABC transpo 100.0 4.6E-34 1E-38 327.1 21.0 204 604-822 10-241 (258)
465 PRK09493 glnQ glutamine ABC tr 100.0 4.7E-34 1E-38 323.8 20.9 199 607-823 2-225 (240)
466 TIGR02324 CP_lyasePhnL phospho 100.0 4.2E-34 9.1E-39 320.8 20.2 201 1224-1429 2-222 (224)
467 PRK14248 phosphate ABC transpo 100.0 5.4E-34 1.2E-38 328.4 21.6 205 604-823 19-252 (268)
468 PRK14251 phosphate ABC transpo 100.0 3.6E-34 7.7E-39 327.0 20.0 202 606-822 4-234 (251)
469 PRK14249 phosphate ABC transpo 100.0 6E-34 1.3E-38 325.1 21.6 203 606-823 4-235 (251)
470 cd03269 ABC_putative_ATPase Th 100.0 3.3E-34 7.2E-39 318.3 19.0 191 608-816 2-210 (210)
471 PRK10575 iron-hydroxamate tran 100.0 6.5E-34 1.4E-38 327.0 21.9 201 604-822 9-236 (265)
472 TIGR03415 ABC_choXWV_ATP choli 100.0 2.8E-34 6.2E-39 340.3 19.4 188 626-824 38-255 (382)
473 PRK13545 tagH teichoic acids e 100.0 1.6E-33 3.6E-38 337.6 26.0 214 1223-1455 21-241 (549)
474 PRK14270 phosphate ABC transpo 100.0 5.4E-34 1.2E-38 325.4 20.9 203 606-823 4-235 (251)
475 TIGR03411 urea_trans_UrtD urea 100.0 5.5E-34 1.2E-38 323.8 20.8 197 607-822 3-230 (242)
476 PRK14239 phosphate transporter 100.0 5.6E-34 1.2E-38 325.7 21.0 203 606-823 5-236 (252)
477 PRK13652 cbiO cobalt transport 100.0 7.8E-34 1.7E-38 328.1 22.3 201 606-823 3-227 (277)
478 PRK13645 cbiO cobalt transport 100.0 5.5E-34 1.2E-38 331.6 21.2 207 605-823 5-240 (289)
479 PRK13649 cbiO cobalt transport 100.0 5.1E-34 1.1E-38 330.7 20.8 206 606-823 2-234 (280)
480 PRK10247 putative ABC transpor 100.0 5.5E-34 1.2E-38 319.7 20.2 198 605-819 6-223 (225)
481 TIGR01189 ccmA heme ABC export 100.0 3.8E-34 8.3E-39 314.7 18.5 192 1224-1428 1-197 (198)
482 PRK13642 cbiO cobalt transport 100.0 7.2E-34 1.6E-38 328.4 21.6 204 606-824 4-230 (277)
483 PRK14240 phosphate transporter 100.0 8.5E-34 1.8E-38 323.8 21.8 202 606-822 3-233 (250)
484 PRK13648 cbiO cobalt transport 100.0 8.4E-34 1.8E-38 326.8 21.8 203 605-823 6-231 (269)
485 TIGR01188 drrA daunorubicin re 100.0 3.7E-34 7.9E-39 334.8 19.1 187 626-824 7-214 (302)
486 PRK10584 putative ABC transpor 100.0 9.1E-34 2E-38 319.0 21.5 197 605-815 5-227 (228)
487 PRK14243 phosphate transporter 100.0 1.3E-33 2.7E-38 324.3 23.0 204 605-823 9-248 (264)
488 TIGR03410 urea_trans_UrtE urea 100.0 6E-34 1.3E-38 320.9 19.9 197 608-821 2-219 (230)
489 PRK10070 glycine betaine trans 100.0 4.4E-34 9.6E-39 341.2 19.5 188 626-824 42-255 (400)
490 PRK14236 phosphate transporter 100.0 9.1E-34 2E-38 326.9 21.5 205 603-822 22-255 (272)
491 TIGR02673 FtsE cell division A 100.0 3.5E-34 7.7E-39 319.2 17.5 188 607-811 2-214 (214)
492 PRK10619 histidine/lysine/argi 100.0 7.5E-34 1.6E-38 325.3 20.6 202 605-823 4-241 (257)
493 cd03223 ABCD_peroxisomal_ALDP 100.0 8.4E-34 1.8E-38 302.3 19.5 161 607-810 1-163 (166)
494 PRK11231 fecE iron-dicitrate t 100.0 9.4E-34 2E-38 324.1 21.2 198 607-822 3-226 (255)
495 cd03292 ABC_FtsE_transporter F 100.0 4.3E-34 9.3E-39 318.6 17.8 188 608-812 2-214 (214)
496 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 8E-34 1.7E-38 317.8 19.9 197 1224-1438 23-224 (224)
497 PRK10771 thiQ thiamine transpo 100.0 1.8E-33 3.9E-38 317.2 23.0 197 607-823 2-219 (232)
498 PRK11124 artP arginine transpo 100.0 1E-33 2.2E-38 321.5 21.0 198 606-821 2-228 (242)
499 PRK11300 livG leucine/isoleuci 100.0 1.2E-33 2.6E-38 323.6 21.7 199 606-822 5-242 (255)
500 TIGR03269 met_CoM_red_A2 methy 100.0 5.3E-34 1.2E-38 359.0 20.7 215 1224-1445 1-258 (520)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7e-261 Score=2476.66 Aligned_cols=1237 Identities=42% Similarity=0.704 Sum_probs=1138.5
Q ss_pred CCCCCCCCh--hHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCccHHHHHHHHHhH
Q 000497 203 TDSGNNQSY--WDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGY 280 (1460)
Q Consensus 203 ~~~e~~~~~--~s~~~f~Wl~~l~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~ 280 (1460)
++|.+.++. +|+++|||++|++++|||++|+.+|+|+++++++++.+.++|++.|+++.++++++|+++++++++|||
T Consensus 122 ~~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~~~~~psl~~al~~~f~~ 201 (1381)
T KOG0054|consen 122 PNPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGRSGKKPSLLRALLRTFGR 201 (1381)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhccccCCcHHHHHHHHHHHH
Confidence 345555555 999999999999999999999999999999999999999999999999874434678999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 281 PYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQG-SGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTII 359 (1460)
Q Consensus 281 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~-~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~i 359 (1460)
+++..++++++.+...|++|.+++.++++++++ .+.+.||+|+++++++.++++++.++|+|...++|+++|+++.++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~I 281 (1381)
T KOG0054|consen 202 TFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAI 281 (1381)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHH
Confidence 999999999999999999999999999999884 5678899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000497 360 YQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWI 439 (1460)
Q Consensus 360 y~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~ 439 (1460)
|+|+|+++...+++.+.|+++|+|++|++|+.+++.++|.+|.+|+|+++++|+||.++|+++++|++++++++|+|.++
T Consensus 282 Y~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~ 361 (1381)
T KOG0054|consen 282 YRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFL 361 (1381)
T ss_pred HHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 440 ANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLF 519 (1460)
Q Consensus 440 ~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (1460)
+++++++|++.|+.+|+|++.++|+|+|||+|||||||+.|.++|++.|++|++.++|..++.+++.+++.+.|++++++
T Consensus 362 a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~ 441 (1381)
T KOG0054|consen 362 AKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVV 441 (1381)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCc
Q 000497 520 TFGLFA-LMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLS 598 (1460)
Q Consensus 520 ~f~~~~-~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~ 598 (1460)
+|++|+ ..++.++++++|+++++|++++.|+..+|..++.++++.+|++|+++||..+|.++..... .+.
T Consensus 442 tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~--~~~------- 512 (1381)
T KOG0054|consen 442 TFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVER--SPD------- 512 (1381)
T ss_pred HHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCcccccc--CCC-------
Confidence 999999 7788999999999999999999999999999999999999999999999998876632110 011
Q ss_pred cCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeCcEEEE
Q 000497 599 NFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYV 678 (1460)
Q Consensus 599 ~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~ 678 (1460)
...+.+++++|++|+|+++++++ .|+||||+|++|+++||||++||||||||++|+||+++.+|+|.++|++|||
T Consensus 513 --~~~~~~i~i~~~sfsW~~~~~~~---tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv 587 (1381)
T KOG0054|consen 513 --EAGENAIEIKNGSFSWDSESPEP---TLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYV 587 (1381)
T ss_pred --CCCCceEEEeeeeEecCCCCCcc---cccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEe
Confidence 23556899999999999854444 4999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEE
Q 000497 679 PQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYML 758 (1460)
Q Consensus 679 ~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illl 758 (1460)
||+|||+||||||||+||++||++||++|+++|+|++|++.||.||+|+|||+|.||||||||||+||||+|+++|||||
T Consensus 588 ~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLL 667 (1381)
T KOG0054|consen 588 PQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLL 667 (1381)
T ss_pred ccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhccccCcccccccchh
Q 000497 759 DDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTS 838 (1460)
Q Consensus 759 De~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 838 (1460)
|||+||||+||++|||++|+.| .+++||||+|||+++++++||+|++|+||+|.++|+|+|+++.+..+.++..+.+.+
T Consensus 668 DDplSAVDahvg~~if~~ci~~-~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~ 746 (1381)
T KOG0054|consen 668 DDPLSAVDAHVGKHIFEECIRG-LLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESE 746 (1381)
T ss_pred cCcchhhhHhhhHHHHHHHHHh-hhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccchh
Confidence 9999999999999999999977 889999999999999999999999999999999999999997766555432111111
Q ss_pred hhhh--hhhhccccc---c---hhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHHHHHhhh-hhHHHHHHHHHHH
Q 000497 839 LHMQ--KQEMRTNAS---S---ANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKF-SGWFITLVICLSA 909 (1460)
Q Consensus 839 ~~~~--~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~-~g~~~~~~~~~~~ 909 (1460)
.... ....+.... . ........+++.....++..+..++|+++.|.++|++|+.|+++ .|+....+++++.
T Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~ 826 (1381)
T KOG0054|consen 747 QEEEASEKDLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLF 826 (1381)
T ss_pred hccccccccccccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHH
Confidence 1000 000000000 0 00000000111111112245566778889999999999999998 5666677777888
Q ss_pred HHHHHHHhhhhhhhhhhccccCCCCCC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Q 000497 910 ILMQASRNGNDLWLSYWVDTTGSSQTK-YSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPV 988 (1460)
Q Consensus 910 ~~~~~~~~~~~~wl~~w~~~~~~~~~~-~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~ 988 (1460)
++.+++..+.++||++|++........ .+..+|+++|++++++..++.+++++.+..++.++++++|++|+++++|+||
T Consensus 827 v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm 906 (1381)
T KOG0054|consen 827 VLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPM 906 (1381)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 999999999999999999875332221 4678999999999999999999999999999999999999999999999999
Q ss_pred ccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 989 LFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELR 1068 (1460)
Q Consensus 989 ~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~l~ 1068 (1460)
+|||+||+|||+||||+|++.+|+.+|..+..++.+++.++++++++++..|+++++++|+.++|++++++|++++||++
T Consensus 907 ~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLk 986 (1381)
T KOG0054|consen 907 SFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELK 986 (1381)
T ss_pred hhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000497 1069 RLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIG 1148 (1460)
Q Consensus 1069 rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~ 1148 (1460)
|+|+.+|||+|+||+|+++|+.|||||+.|++|.+++.+++|.+++++|...+.+||+++|+|+++++++.++++++++.
T Consensus 987 RLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~ 1066 (1381)
T KOG0054|consen 987 RLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLL 1066 (1381)
T ss_pred HhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888888864
Q ss_pred hcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc--cccCCCCCCCCCCCccEEE
Q 000497 1149 SRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE--LCGYQSLSPDWPFQGLIEF 1226 (1460)
Q Consensus 1149 ~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~--~~~~~~~~~~wp~~g~I~f 1226 (1460)
... ..++|.+|++++|++++++.++|++++.+++|+.|+||||+.||.++|+|+ ......||++||.+|+|+|
T Consensus 1067 ~~~-----~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f 1141 (1381)
T KOG0054|consen 1067 PSG-----LISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEF 1141 (1381)
T ss_pred cCC-----CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEE
Confidence 321 145999999999999999999999999999999999999999999998883 1222338899999999999
Q ss_pred EEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeC
Q 000497 1227 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1306 (1460)
Q Consensus 1227 ~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQ 1306 (1460)
+|+++||+|+.|+|||||||+|+||||||||||||||||||+++|||+.||.+|+|.|||+||+++++++||+++++|||
T Consensus 1142 ~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQ 1221 (1381)
T KOG0054|consen 1142 EDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQ 1221 (1381)
T ss_pred EEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000497 1307 SPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1384 (1460)
Q Consensus 1307 dp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDE 1384 (1460)
||+||+||+|+||||+++++|++||+||++|+|+++|+++ |||+.|.|+|.|||.||||++||||||||++|||+|||
T Consensus 1222 dPvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDE 1301 (1381)
T KOG0054|consen 1222 DPVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDE 1301 (1381)
T ss_pred CCceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEec
Confidence 9999999999999999999999999999999999999988 99999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhhC
Q 000497 1385 CTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1459 (1460)
Q Consensus 1385 aTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1459 (1460)
|||++|++||..||++||++|+|||||+||||++||+|||||+|||+|+|+|+|+|++|+++++|.|++++++.+
T Consensus 1302 ATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~ 1376 (1381)
T KOG0054|consen 1302 ATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAA 1376 (1381)
T ss_pred ccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998887654
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.7e-211 Score=2136.41 Aligned_cols=1431 Identities=31% Similarity=0.525 Sum_probs=1184.6
Q ss_pred CccCCCCcc-ccccc------cccchhhhHHHHHHhhhHHHH-HHhhhc-ccc-cCCCccchhhHHHHHHHHHHHHHHHH
Q 000497 2 DFICPNSPF-VWDGS------TFSKCFDDMILDFATNMVTIF-IILIIG-ITQ-RSPRQNQRINLMEKVFLHILPLVGAC 71 (1460)
Q Consensus 2 ~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~~~k~~~~~~~~~~~~ 71 (1460)
+-+|+.... +|.+. .+.+||++..+..+++..... ..+.+- .++ .+...+..+..+.|+.+.+++++.++
T Consensus 7 ~~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1622)
T PLN03130 7 DWYCRPVPNGVWAKKVDNAFGAYTPCATDSLVINISHLVLLGLCLYRIWLIKKDHKVQRFCLRSKWYNYFLALLAAYCTA 86 (1622)
T ss_pred hhhcCCCccCCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHhccccccCCccccchHHHHHHHHHHHHHHH
Confidence 347964322 35553 466999995444444433332 111111 111 12223333356666666655554333
Q ss_pred HHHHHHHHH---HHHhcc-CccccchH-HHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHH---HHHHHHHH-h
Q 000497 72 LSSVDVILL---LKEKLH-GEFVSYHE-WLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIK---PVMGILHQ-L 142 (1460)
Q Consensus 72 ~~~~~~~~~---~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~l~~~~~~~---~~~~~~~~-r 142 (1460)
..++..... ..+... +.+..+.. +++.++..++++++.++.+.||.|+.+++..+.+||++. +++.++.. |
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1622)
T PLN03130 87 EPLFRLVMGISVLNLDGQTSLPPFEIVSLIVEALTWCSMLVMIGVETKIYIREFRWYVRFAVIYVLVGDAVMLNLVLSVK 166 (1622)
T ss_pred HHHHHHHHHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeehhHHHhhHHHHHHHHHHHH
Confidence 333222211 111110 11222333 666788888888888888999999999999999999998 77776621 1
Q ss_pred HHhhhhhhhhhhhHHHHHHHHHHHHHHHH-HHHHhhcccCccccc---ccccccCCCC-CCCCCCCCCCCCCChhHHHHH
Q 000497 143 VTFSSFEQVLKCLKEICLVLLDIMFGISI-NIIRVKRASSRRSSI---EESLLSVDGD-VEEDCNTDSGNNQSYWDLMAF 217 (1460)
Q Consensus 143 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~e~~~~~~s~~~f 217 (1460)
..+. .. .... ....+++.+++.++. ++.+..++.+ .+. .+...+.++. .....+.+||+++|+|||++|
T Consensus 167 ~~~~-~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~F 240 (1622)
T PLN03130 167 EYYS-SF--VLYL-YISEVAAQVLFGILLLVYFPNLDPYP--GYTPIGSESVDDYEYEELPGGEQICPERHANIFSRIFF 240 (1622)
T ss_pred HHHh-cc--ccce-ehhHHHHHHHHHHHHHHHHhcCCCCc--ccccccccccccccccCCcccCCCCcccccCHHHHHHH
Confidence 1110 00 0011 122233334333332 2222222211 010 0000000000 012346799999999999999
Q ss_pred HhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000497 218 KSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGF 297 (1460)
Q Consensus 218 ~Wl~~l~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~ 297 (1460)
||++|++++|||++|+.+|||+++++++++.+.++|++.|+++. + +++++|+++++++|++.++..++++++.+++.+
T Consensus 241 ~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~-~-~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~ 318 (1622)
T PLN03130 241 GWMTPLMQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEEL-K-KPKPWLLRALNNSLGGRFWLGGFFKIGNDLSQF 318 (1622)
T ss_pred HHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHh-c-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999875 2 356899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChh
Q 000497 298 AGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDG 377 (1460)
Q Consensus 298 ~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g 377 (1460)
++|++++.+++++.++...+.++++++++++..++.+++.++|.+...+++.++|+.+...+|+|+++++...+++.++|
T Consensus 319 ~~P~ll~~li~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G 398 (1622)
T PLN03130 319 VGPLLLNLLLESMQNGEPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSG 398 (1622)
T ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHH
Confidence 99999999999997644445677777777777777777788888888999999999999999999999999988888999
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 378 EIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDER 457 (1460)
Q Consensus 378 ~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R 457 (1460)
+++|+|++|++++.+....+|.+|..|+++++++++||..+|+++++|++++++++|++.++++++++.++++++.+|+|
T Consensus 399 ~ivnl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r 478 (1622)
T PLN03130 399 KITNLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKR 478 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHH
Q 000497 458 IRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVF 537 (1460)
Q Consensus 458 ~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~f 537 (1460)
++.++|+++|||+||+||||+.+.+++++.|++|++..++..+..++..+++...|.++++++|++|.+.++.+|++.+|
T Consensus 479 ~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~vf 558 (1622)
T PLN03130 479 IGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARAF 558 (1622)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999888888888888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEcceEecc
Q 000497 538 TCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWY 617 (1460)
Q Consensus 538 t~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~ 617 (1460)
+++++++.+..|+..+|..+..+.++++|++||++||..+|..+... .+. ......|+++|++|+|+
T Consensus 559 ~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~----~~~---------~~~~~~I~~~nvsf~y~ 625 (1622)
T PLN03130 559 TSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPN----PPL---------EPGLPAISIKNGYFSWD 625 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccC----Ccc---------cCCCCceEEEeeEEEcc
Confidence 99999999999999999999999999999999999998765422100 000 01224699999999997
Q ss_pred CCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC-eEEEEeCcEEEEcCCCCCCCccHHHHHccC
Q 000497 618 CNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH-GSIHASGSIAYVPQVPWILSGTIRDNILFG 696 (1460)
Q Consensus 618 ~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~-G~i~~~~~i~y~~Q~p~l~~~ti~~nI~~g 696 (1460)
.+++ +++|+|+||++++|++++|+||+|||||||+++|+|+++|++ |+|.++++||||+|+|||||+||||||+||
T Consensus 626 ~~~~---~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreNI~fg 702 (1622)
T PLN03130 626 SKAE---RPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDNILFG 702 (1622)
T ss_pred CCCC---CceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHHHhCC
Confidence 5432 345999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHH
Q 000497 697 KNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSN 776 (1460)
Q Consensus 697 ~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~ 776 (1460)
+++|+++|++++++|+|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++|+++
T Consensus 703 ~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~ 782 (1622)
T PLN03130 703 SPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDK 782 (1622)
T ss_pred CcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhh--hhhccc-ccch
Q 000497 777 AIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQK--QEMRTN-ASSA 853 (1460)
Q Consensus 777 ~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~ 853 (1460)
|+.+ .++++|+|+|||+++.++.||+|++|++|+++++|+++|+++..+.+..+..+.....+... .+.... ....
T Consensus 783 ~l~~-~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (1622)
T PLN03130 783 CIKD-ELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEEEDDQTSSK 861 (1622)
T ss_pred HhhH-HhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhcccccccccccccccccccccc
Confidence 8766 56889999999999999999999999999999999999998765544332211100000000 000000 0000
Q ss_pred hh-h---hhhhcccc--cCCCcchhhHHHHHHHhcccchhHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 000497 854 NK-Q---ILLQEKDV--VSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGW-FITLVICLSAILMQASRNGNDLWLSYW 926 (1460)
Q Consensus 854 ~~-~---~~~~~~~~--~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~-~~~~~~~~~~~~~~~~~~~~~~wl~~w 926 (1460)
.. . ........ .+..+......++|+++.|.+++++|++|+++.|. +..++++++.++.++...++++|+++|
T Consensus 862 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w 941 (1622)
T PLN03130 862 PVANGNANNLKKDSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEW 941 (1622)
T ss_pred cccccccccccccccccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 00000000 00000112234567788999999999999998653 344444556667788888999999999
Q ss_pred ccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhh
Q 000497 927 VDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSD 1006 (1460)
Q Consensus 927 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D 1006 (1460)
++.... .......|+++|++++++..++.+++.+++...+.+++.++|++++++++++|++|||++|+|+|+|||++|
T Consensus 942 ~~~~~~--~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~D 1019 (1622)
T PLN03130 942 TDQGTP--KTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKD 1019 (1622)
T ss_pred Hhcccc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHH
Confidence 975322 122345688899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhh
Q 000497 1007 LYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETL 1086 (1460)
Q Consensus 1007 ~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl 1086 (1460)
++.+|..++..+..++..++.+++.++++++..|+++++++|+.++++.++++|.+++|++++++.++++|+++|+.|++
T Consensus 1020 i~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl 1099 (1622)
T PLN03130 1020 LGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEAL 1099 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHh
Confidence 99999999999999999999999988888888888888888988888889999999999999999999999999999999
Q ss_pred cChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHH
Q 000497 1087 NGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLA 1166 (1460)
Q Consensus 1087 ~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~ 1166 (1460)
+|+.|||+|+++++|.+.+.+..|.+++..+.....++|++.++++++++++.+.+.+.+.... ........++.+|++
T Consensus 1100 ~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~-~~~~~~~~~~~~G~~ 1178 (1622)
T PLN03130 1100 NGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNG-RAENQAAFASTMGLL 1178 (1622)
T ss_pred CCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccccchhhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999887766555544443211 100111236789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccc--cCCCCCCCCCCCccEEEEEEEEEecCCCCccceee
Q 000497 1167 LSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDI 1244 (1460)
Q Consensus 1167 l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~--~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~i 1244 (1460)
++|++.+...++++.+.+.++|+.++|+||+.+|.+.|+|+.. +...+++.||.+|.|+|+||+|+|+++.++||+|+
T Consensus 1179 ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~i 1258 (1622)
T PLN03130 1179 LSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGL 1258 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecce
Confidence 9999999999999999999999999999999999998887532 22345567999999999999999988777899999
Q ss_pred EEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCCC
Q 000497 1245 NFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM 1324 (1460)
Q Consensus 1245 sl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~ 1324 (1460)
||+|+||||||||||||||||||+++|+|+|+|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++
T Consensus 1259 s~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~ 1338 (1622)
T PLN03130 1259 SFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNE 1338 (1622)
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHH
Q 000497 1325 NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAIS 1402 (1460)
Q Consensus 1325 ~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~ 1402 (1460)
++|+|+|+||++++++++++++ ||||.++|+|.||||||||||||||||||+|+|||||||||+||.+||+.||++|+
T Consensus 1339 ~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~ 1418 (1622)
T PLN03130 1339 HNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIR 1418 (1622)
T ss_pred CCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999998 99999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhhCC
Q 000497 1403 SECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRASTM 1460 (1460)
Q Consensus 1403 ~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g~ 1460 (1460)
+.+++||+|+||||++|+++||||+|||+|+|+|+|+|+||+++++|.|++|++++|.
T Consensus 1419 ~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~ 1476 (1622)
T PLN03130 1419 EEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGA 1476 (1622)
T ss_pred HHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcCh
Confidence 9999999999999999999999999999999999999999999878899999998873
No 3
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=3.1e-210 Score=2136.10 Aligned_cols=1407 Identities=31% Similarity=0.516 Sum_probs=1197.1
Q ss_pred ccchhhhHHHHHHhhhHHHH-HHhhhc-ccccCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc-cc
Q 000497 17 FSKCFDDMILDFATNMVTIF-IILIIG-ITQRSPR-QNQRINLMEKVFLHILPLVGACLSSVDVILLLKEKLHGEFV-SY 92 (1460)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 92 (1460)
+.+||.+..+..+++.++.+ ....+- ..++.++ ....+.+..|++...++++ ++++. ++...|..+.... .+
T Consensus 23 ~t~~f~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~ 98 (1522)
T TIGR00957 23 FTKCFQNTVLAWVPCFYLWVCFPCYFLYLSRHDRGYIQMTHLNKTKTALGFLLWI---VCWAD-LFYSFWERSHGRAPAP 98 (1522)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcCCcchHHHHHHHHHHHHHH---HHHHH-HHHHHHhccccccccc
Confidence 55999998887766666655 222111 1122222 3445566777766655433 23322 2333333322222 25
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhHHhhhhhhhh---hhhHHHHHHHHHHHHHH
Q 000497 93 HEWLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIKPVMGILHQLVTFSSFEQVL---KCLKEICLVLLDIMFGI 169 (1460)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~l~~~~~~~~~~~~~~~rt~~~~~~~~~---~~~~~~~~~~~~~~~~~ 169 (1460)
.+++++++.++++++++++++.||.|++|||.++.+||++++++|++++||+|....... ... ....+++.++++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 177 (1522)
T TIGR00957 99 VFLVSPTLLGITMLLATFLIQLERRKGVQSSGIMLTFWLVALVCALAILRSKILLALKEDAIVDPF-RDTTFYIYFALVL 177 (1522)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhcccCCCcchhHHHHHHHHHHHHHHHHHHHHhhcccccccce-ehhhHHHHHHHHH
Confidence 678899999999999999999999999999999999999999999999999987522000 011 1223334444444
Q ss_pred HHHHHHh-hcccCcccccccccccCCCCCCCCCCCCCCCCCChhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhH
Q 000497 170 SINIIRV-KRASSRRSSIEESLLSVDGDVEEDCNTDSGNNQSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPST 248 (1460)
Q Consensus 170 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~s~~~f~Wl~~l~~~g~~~~L~~~dl~~l~~~~~~~~ 248 (1460)
+.++.+. .+++| .+.+.. ...+.+||+++|++||++|||+||++++|||++|+.+|||+++++++++.
T Consensus 178 ~~~~~~~~~~~~~--------~~~~~~---~~~~~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~ 246 (1522)
T TIGR00957 178 SQLVLSCFSDKSP--------LFSETN---HDPNPCPESSASFLSRITFWWITGMAVYGYRQPLEESDLWSLNKEDTSEM 246 (1522)
T ss_pred HHHHHHhhcCCCC--------cccccc---ccCCCCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhccCCCHhHhHHH
Confidence 4433332 22222 111100 11246899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc---------------------------------------CCCCccHHHHHHHHHhHHHHHHHHHH
Q 000497 249 CHSKLLSCWQAQRSC---------------------------------------NCTNPSLVRAICCAYGYPYICLGLLK 289 (1460)
Q Consensus 249 ~~~~~~~~w~~~~~~---------------------------------------~~~~~~l~~~l~~~~~~~~~~~~~~~ 289 (1460)
+.++|++.|+++.++ +.++++|+++++++|++.++..++++
T Consensus 247 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~l~~~~~~ 326 (1522)
T TIGR00957 247 VVPVLVENWKKECKKTRKQPVSAVYGKKDPSKPKGSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFGPYFLMSFCFK 326 (1522)
T ss_pred HHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccCCccHHHHHHHHHhHHHHHHHHHH
Confidence 999999999875311 11347899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 000497 290 VVNDSIGFAGPLLLNKLIKFLQQG-SGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRL 368 (1460)
Q Consensus 290 l~~~~~~~~~P~ll~~li~~~~~~-~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~ 368 (1460)
++.+++.+++|++++.+++++.++ .+.+.||++++++++++++.+++.++|.|...+++.++|++|+..||+|+|+++.
T Consensus 327 l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~ 406 (1522)
T TIGR00957 327 AIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALVITN 406 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 999999999999999999999763 3445689999999999999999999999999999999999999999999999999
Q ss_pred cccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 369 AERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATE 448 (1460)
Q Consensus 369 ~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~ 448 (1460)
..+++.++|+++|+|++|++++..+...+|.+|..|++++++++++|.++|+++++|++++++++|++.++++++++.++
T Consensus 407 ~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 486 (1522)
T TIGR00957 407 SARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMKTKTYQV 486 (1522)
T ss_pred hhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Q 000497 449 KMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALM- 527 (1460)
Q Consensus 449 ~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~- 527 (1460)
++++.+|+|++.++|+++|||+||+||||+.+.+++++.|++|++..++..+...+..+.+...|.++.+++|++|.+.
T Consensus 487 ~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 566 (1522)
T TIGR00957 487 AHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALITFAVYVTVD 566 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999888888778888888889999999876
Q ss_pred -CCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCccCCCCCce
Q 000497 528 -GHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMA 606 (1460)
Q Consensus 528 -~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (1460)
++.|+++.+|+++++++++..|+..+|..++.+.++.+|++||++||+.++.++..... .... ......
T Consensus 567 ~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~-~~~~---------~~~~~~ 636 (1522)
T TIGR00957 567 ENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIER-RTIK---------PGEGNS 636 (1522)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccc-cccC---------CCCCCc
Confidence 46799999999999999999999999999999999999999999999876543211000 0000 011236
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeCcEEEEcCCCCCCC
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILS 686 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~p~l~~ 686 (1460)
++++|++|+|+.+ + +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+||||+|+||+++
T Consensus 637 i~~~~~~~~~~~~-~---~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~i~yv~Q~~~l~~ 712 (1522)
T TIGR00957 637 ITVHNATFTWARD-L---PPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKGSVAYVPQQAWIQN 712 (1522)
T ss_pred EEEEEeEEEcCCC-C---CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECCEEEEEcCCccccC
Confidence 9999999999742 1 24599999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCccccc
Q 000497 687 GTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVD 766 (1460)
Q Consensus 687 ~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD 766 (1460)
+||||||.||.++|+++|++++++|++.+|++.+|+||+|.+|++|.+|||||||||+||||+|++|++++||||||+||
T Consensus 713 ~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD 792 (1522)
T TIGR00957 713 DSLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVD 792 (1522)
T ss_pred CcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcC-cccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhccccCcccccccch--hh---h
Q 000497 767 AQVARWILSNAIMG-PHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDT--SL---H 840 (1460)
Q Consensus 767 ~~~~~~i~~~~~~~-~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~--~~---~ 840 (1460)
+++++++++.+... ...+++|+|+|||+++.++.||+|++|++|+++++|+++++.++.+.+..+..+... .. +
T Consensus 793 ~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~ 872 (1522)
T TIGR00957 793 AHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLE 872 (1522)
T ss_pred HHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcchhHHHHHHhhcccccccccc
Confidence 99999999986521 156789999999999999999999999999999999999998654443322110000 00 0
Q ss_pred hh------hhhhcc-------cc---cchhh-h------h--hh---h---cc--cccCCCcchhhHHHHHHHhcccchh
Q 000497 841 MQ------KQEMRT-------NA---SSANK-Q------I--LL---Q---EK--DVVSVSDDAQEIIEVEQRKEGRVEL 887 (1460)
Q Consensus 841 ~~------~~~~~~-------~~---~~~~~-~------~--~~---~---~~--~~~~~~~~~~~~~~~e~~~~g~v~~ 887 (1460)
.. .+..+. .. ..+.. . . .. . .. +..+..+...+..++|.++.|.+++
T Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~ 952 (1522)
T TIGR00957 873 DSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVEL 952 (1522)
T ss_pred ccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhHHHHHHhcCcccH
Confidence 00 000000 00 00000 0 0 00 0 00 0000000112344667788899999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 888 TVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFG 967 (1460)
Q Consensus 888 ~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~ 967 (1460)
++|++|+++.|+...++++++.++.+++..+.++|+++|++............+|+++|++++++..++.++..+++.+.
T Consensus 953 ~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~ 1032 (1522)
T TIGR00957 953 SVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIG 1032 (1522)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998877766667777778888899999999997532111223345678899999999998888888888999
Q ss_pred HHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHH
Q 000497 968 SLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLV 1047 (1460)
Q Consensus 968 ~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~i 1047 (1460)
+.++++++|++++++++++|++||+++|+|+++|||++|++.+|+.++..+..++..++.+++.++++++..|+++++++
T Consensus 1033 ~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~ 1112 (1522)
T TIGR00957 1033 GIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIP 1112 (1522)
T ss_pred HHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998888888999988889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1048 PFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLS 1127 (1460)
Q Consensus 1048 p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~ 1127 (1460)
|+.++++.++++|.+++|++++++.++++|+++|+.|+++|+.|||+|++|++|.+++.+..|.++++.+.....++|++
T Consensus 1113 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 1192 (1522)
T TIGR00957 1113 PLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLA 1192 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q 000497 1128 LRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1207 (1460)
Q Consensus 1128 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~ 1207 (1460)
.++++++.+++.+++.+.++. .+..++|.+|++++|+..+..++.++++.++++|+.++|++|+.+|.+.|+|+
T Consensus 1193 ~~~~~~~~~~~~~~~~~~v~~------~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~ 1266 (1522)
T TIGR00957 1193 VRLECVGNCIVLFAALFAVIS------RHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEA 1266 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 999998876655554444431 13457899999999999999999999999999999999999999999888775
Q ss_pred cc--cCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEEC
Q 000497 1208 LC--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD 1285 (1460)
Q Consensus 1208 ~~--~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ID 1285 (1460)
.. +...++++||.+|.|+|+||+|+|+++.++||+||||+|+||||||||||||||||||+++|+|+++|++|+|.||
T Consensus 1267 ~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~Id 1346 (1522)
T TIGR00957 1267 PWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIID 1346 (1522)
T ss_pred cccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEEC
Confidence 31 2234556799999999999999998777789999999999999999999999999999999999999999999999
Q ss_pred CEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhH
Q 000497 1286 GLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1363 (1460)
Q Consensus 1286 G~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQ 1363 (1460)
|+||++++++++|++|++|||||+||+||||+||||+++++|+|+|+|+++|+++++++++ ||||.++|+|.||||||
T Consensus 1347 G~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQ 1426 (1522)
T TIGR00957 1347 GLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQ 1426 (1522)
T ss_pred CEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHH
Q 000497 1364 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTL 1443 (1460)
Q Consensus 1364 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eL 1443 (1460)
|||+||||||||+|+|||||||||+||.+||+.||++|++.+++||||+||||++++++||||+|||+|+|+|+|+|+||
T Consensus 1427 rQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eL 1506 (1522)
T TIGR00957 1427 RQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNL 1506 (1522)
T ss_pred HHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCcHHHHHHHhhCC
Q 000497 1444 LQDECSVFSSFVRASTM 1460 (1460)
Q Consensus 1444 l~~~~~~f~~l~~~~g~ 1460 (1460)
+++ +|.|++|++++|.
T Consensus 1507 l~~-~~~f~~l~~~~g~ 1522 (1522)
T TIGR00957 1507 LQQ-RGIFYSMAKDAGL 1522 (1522)
T ss_pred HhC-CCHHHHHHHHcCC
Confidence 997 5899999999884
No 4
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=6.5e-207 Score=2100.53 Aligned_cols=1429 Identities=30% Similarity=0.518 Sum_probs=1178.4
Q ss_pred cCCCCc-cccccc------cccchhhhHHHHHHhhhHHHH-HHhhhc-c-cccCCCccchhhHHHHHHHHHHHHHHHHHH
Q 000497 4 ICPNSP-FVWDGS------TFSKCFDDMILDFATNMVTIF-IILIIG-I-TQRSPRQNQRINLMEKVFLHILPLVGACLS 73 (1460)
Q Consensus 4 ~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 73 (1460)
+|+... ..|.+. .+.+||++..+...++..... ..+.+- . ..++...+..+..+.|+.+.+++++.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (1495)
T PLN03232 9 YCKPIAEGFWEKTVDGAFGAYTPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAKAQIYVLRKKYYNCVLGILACYCVVEP 88 (1495)
T ss_pred hcCCccccCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHHhhccccCCccccchHHHHHHHHHHHHHHHHH
Confidence 785322 245543 356999995444444433332 222111 1 012222233336666776665555443333
Q ss_pred HHHHHH---HHHHhcc-CccccchH-HHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHH---HHHHHHHHhHHh
Q 000497 74 SVDVIL---LLKEKLH-GEFVSYHE-WLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIK---PVMGILHQLVTF 145 (1460)
Q Consensus 74 ~~~~~~---~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~l~~~~~~~---~~~~~~~~rt~~ 145 (1460)
.+.... ...+... .....+.. +++.++..++++++..+.+.||.|+.+++..+.+||++. +++.++. .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 164 (1495)
T PLN03232 89 VLRLVMGISLFDMDEETDLPPFEVASLMVEAFAWFSMLVLIGLETKQYVKEFRWYVRFGVVYVLVADAVLLDLVL----P 164 (1495)
T ss_pred HHHHHHHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeehhHhhhhHHHHHHHH----H
Confidence 322111 0111111 11223344 667788888888788889999999999999999999999 7777762 1
Q ss_pred hhhhhhhh---hhHHHHHHHHHHHHHHHH-HHHHhhcccCcccccccccccC-CC-CCCCCCCCCCCCCCChhHHHHHHh
Q 000497 146 SSFEQVLK---CLKEICLVLLDIMFGISI-NIIRVKRASSRRSSIEESLLSV-DG-DVEEDCNTDSGNNQSYWDLMAFKS 219 (1460)
Q Consensus 146 ~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~e~~~~~~s~~~f~W 219 (1460)
..+. ..+ .. ....++..+.+.+.. +..+..++.+.-.....+...+ .+ ..+...+++||+++|+|||++|+|
T Consensus 165 ~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~f~w 242 (1495)
T PLN03232 165 LKNS-INRTALYL-CISSRCCQALFGILLLVYIPELDPYPGYHILNNESLDNVEYDALRGGENICPERYASIFSRIYFSW 242 (1495)
T ss_pred HHHH-Hhccccce-ehhHHHHHHHHHHHHHHhcccCCCCCcccccccccccccccccccccCCCCccccCCHHHHHHHHH
Confidence 1111 111 11 122222233332222 2222222111000000001000 00 001124578999999999999999
Q ss_pred HHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000497 220 IDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGFAG 299 (1460)
Q Consensus 220 l~~l~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 299 (1460)
++|++++||+++|+.+|||+|+++++++.+.++|++.|+++. + +++++|+++++++|++.++..++++++.+++.+++
T Consensus 243 ~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~-~-~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 320 (1495)
T PLN03232 243 MTPLMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEES-R-RPKPWLLRALNNSLGGRFWLGGIFKIGHDLSQFVG 320 (1495)
T ss_pred HHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhh-c-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999865 2 35689999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHH
Q 000497 300 PLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEI 379 (1460)
Q Consensus 300 P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i 379 (1460)
|++++++++++++++..+.++.+++++++..++.+++.++|.+...+++.++|+.+...+|+|+++++...+++.++|++
T Consensus 321 P~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i 400 (1495)
T PLN03232 321 PVILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKV 400 (1495)
T ss_pred HHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHH
Confidence 99999999999765445568888888888888889998899999999999999999999999999999998888899999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 380 QTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIR 459 (1460)
Q Consensus 380 ~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~ 459 (1460)
+|+|++|++++.+....+|.+|..|++++++++++|+.+|++++++++++++++|++.++++++++.++++++.+|+|.+
T Consensus 401 ~n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~ 480 (1495)
T PLN03232 401 TNMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVG 480 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHHH
Q 000497 460 RTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTC 539 (1460)
Q Consensus 460 ~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~ 539 (1460)
.++|+++|||+||+||||+.+.+++++.|++|++..++.....++..+++...|.++++++|++|.+.++.+|++.+|++
T Consensus 481 ~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf~~ 560 (1495)
T PLN03232 481 IINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARAFTS 560 (1495)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999998888887777778888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEcceEeccCC
Q 000497 540 LALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCN 619 (1460)
Q Consensus 540 l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~ 619 (1460)
+++++.+..|+..+|..+..+.++++|++||++||+.++..+... .+. ......|+++|++|+|+.+
T Consensus 561 l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~----~~~---------~~~~~~I~~~~vsF~y~~~ 627 (1495)
T PLN03232 561 LSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQN----PPL---------QPGAPAISIKNGYFSWDSK 627 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc----CCc---------CCCCCcEEEEeeEEEcCCC
Confidence 999999999999999999999999999999999998665321100 000 0123469999999999853
Q ss_pred CccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeE-EEEeCcEEEEcCCCCCCCccHHHHHccCCC
Q 000497 620 NEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS-IHASGSIAYVPQVPWILSGTIRDNILFGKN 698 (1460)
Q Consensus 620 ~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~-i~~~~~i~y~~Q~p~l~~~ti~~nI~~g~~ 698 (1460)
++ +++|+|+||++++|++++|+||+|||||||+++|+|+++|++|. +.++++||||+|+|||||+||||||+||++
T Consensus 628 ~~---~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~ 704 (1495)
T PLN03232 628 TS---KPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSD 704 (1495)
T ss_pred CC---CceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCc
Confidence 22 34599999999999999999999999999999999999999975 567899999999999999999999999999
Q ss_pred CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhh
Q 000497 699 YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAI 778 (1460)
Q Consensus 699 ~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~ 778 (1460)
+|+++|++++++|+|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++|+
T Consensus 705 ~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l 784 (1495)
T PLN03232 705 FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCM 784 (1495)
T ss_pred cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhhhhh-cccccc-h-hh
Q 000497 779 MGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEM-RTNASS-A-NK 855 (1460)
Q Consensus 779 ~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~-~~ 855 (1460)
.+ .++++|+|+|||+++.++.||+|++|++|+++++|+++|+.+..+.+..+..+.....+..+... ...... . ..
T Consensus 785 ~~-~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (1495)
T PLN03232 785 KD-ELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEVNTNDENILKLGPTV 863 (1495)
T ss_pred hh-hhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhcccccccccccccccccccccccc
Confidence 66 56889999999999999999999999999999999999998765544333221110000000000 000000 0 00
Q ss_pred hhhhhcc---cccCCCcchhhHHHHHHHhcccchhHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHhhhhhhhhhhccccC
Q 000497 856 QILLQEK---DVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG-WFITLVICLSAILMQASRNGNDLWLSYWVDTTG 931 (1460)
Q Consensus 856 ~~~~~~~---~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~ 931 (1460)
.....+. +..+..+......++|+++.|.+++++|++|+++.| ++..++++++.++.++...++++|+++|++...
T Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~ 943 (1495)
T PLN03232 864 TIDVSERNLGSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQST 943 (1495)
T ss_pred cccccccccccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 0000000 000000011224566778899999999999999865 344445555666777888889999999987532
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhc
Q 000497 932 SSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMID 1011 (1460)
Q Consensus 932 ~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id 1011 (1460)
. ......+|+++|++++++..++.+++.+++...+.++++++|++++++++++|++||+++|+|+++|||++|++.+|
T Consensus 944 ~--~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id 1021 (1495)
T PLN03232 944 P--KSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDID 1021 (1495)
T ss_pred C--CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHH
Confidence 1 12234679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHH
Q 000497 1012 DSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSST 1091 (1460)
Q Consensus 1012 ~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~t 1091 (1460)
+.++..+..++..++.+++.++++++..++++++++|+.++++.++.+|.+++|++++.+..+++|+++|+.|+++|+.|
T Consensus 1022 ~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~t 1101 (1495)
T PLN03232 1022 RNVANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSS 1101 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHH
Confidence 99999999999888888888888777778888888888888888899999999999999999999999999999999999
Q ss_pred HHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHH
Q 000497 1092 IRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAA 1171 (1460)
Q Consensus 1092 Iraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~ 1171 (1460)
||+|+++++|.+++.+..|.+++..+.....++|+..++++++++++.+.+.+.+... +........++.+|++++|+.
T Consensus 1102 Iraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~g~~~~~~~ 1180 (1495)
T PLN03232 1102 IRAYKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLRN-GNAENQAGFASTMGLLLSYTL 1180 (1495)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-ccccccccchHHHHHHHHHHH
Confidence 9999999999999999999999999998899999999998877655544444444321 111111123567889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccc--cCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEe
Q 000497 1172 PIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIE 1249 (1460)
Q Consensus 1172 ~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~--~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~ 1249 (1460)
.+...++++++.+.++|+.++|+||+.++.+.|+|+.. ....++++||.+|.|+|+||+|+|+++.++||+|+||+|+
T Consensus 1181 ~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~ 1260 (1495)
T PLN03232 1181 NITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVS 1260 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEc
Confidence 99999999999999999999999999999998887532 2223456799999999999999998877889999999999
Q ss_pred CCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCCCCChHH
Q 000497 1250 GGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLK 1329 (1460)
Q Consensus 1250 ~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~~sd~e 1329 (1460)
||||||||||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||++|+||||+||||+++++|+|
T Consensus 1261 ~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdee 1340 (1495)
T PLN03232 1261 PSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDAD 1340 (1495)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCC
Q 000497 1330 IWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKG 1407 (1460)
Q Consensus 1330 i~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~ 1407 (1460)
+|+|+++++++++++++ ||||.++|+|.|||||||||+||||||+|+|+|||||||||+||.+||+.||++|++.+++
T Consensus 1341 i~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~ 1420 (1495)
T PLN03232 1341 LWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKS 1420 (1495)
T ss_pred HHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhhCC
Q 000497 1408 MTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRASTM 1460 (1460)
Q Consensus 1408 ~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g~ 1460 (1460)
||+|+||||++|+++||||+|||+|+|+|+|+|+||+++++|.|++|++++|.
T Consensus 1421 ~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1421 CTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGP 1473 (1495)
T ss_pred CEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhCh
Confidence 99999999999999999999999999999999999999888899999998873
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.7e-195 Score=1983.68 Aligned_cols=1230 Identities=27% Similarity=0.458 Sum_probs=1075.4
Q ss_pred CCCCCCCChhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCccHHHHHHHHHhHHH
Q 000497 203 TDSGNNQSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPY 282 (1460)
Q Consensus 203 ~~~e~~~~~~s~~~f~Wl~~l~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~ 282 (1460)
.+||+++|+|||++|||+||++++||+++|+.+|||+|+++++++.+.++|++.|+++..++.++++|+++++++|+|++
T Consensus 3 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~L~~~l~~~~~~~~ 82 (1490)
T TIGR01271 3 RSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELASAKKNPKLLNALRRCFFWRF 82 (1490)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999998765333456899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 283 ICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGS--GHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIY 360 (1460)
Q Consensus 283 ~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~--~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy 360 (1460)
+..++++++.+++.+++|+++++++++++... ..+.++++++++++++++.+++.+++.|...+++.++|++|...||
T Consensus 83 ~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy 162 (1490)
T TIGR01271 83 VFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIY 162 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999996422 2356889999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000497 361 QKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIA 440 (1460)
Q Consensus 361 ~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~ 440 (1460)
+|+|+++....++.++|+++|+|++|++++..+...+|.+|..|+++++++++||+++|+++++|++++++++|++.+++
T Consensus 163 ~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~ 242 (1490)
T TIGR01271 163 KKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLG 242 (1490)
T ss_pred HHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 441 NLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFT 520 (1460)
Q Consensus 441 ~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (1460)
+++.++++++++.+|+|++.++|+|+|||+||+||||+.|.+++++.|++|++..++..++..+..+++...|.++++++
T Consensus 243 ~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (1490)
T TIGR01271 243 QKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVFLS 322 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888888888999999999
Q ss_pred HHHHHHhCCCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCcc
Q 000497 521 FGLFALMGHQLDAAMVFTCLALFNSLISPLN-SFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSN 599 (1460)
Q Consensus 521 f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~-~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~~ 599 (1460)
|++|.+.++ ++++.+||+++++++++.|+. .+|..+..+.++.+|++||++||..+|.++...
T Consensus 323 f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~--------------- 386 (1490)
T TIGR01271 323 VVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEY--------------- 386 (1490)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc---------------
Confidence 999988765 789999999999999999985 799999999999999999999998766432100
Q ss_pred CCCCCceEEEEcceEeccCCC----------c-------c-----------ccccceeeeeeEecCCcEEEEEcCCCCcH
Q 000497 600 FNSKDMAVIMQDATCSWYCNN----------E-------E-----------EQNVVLNQVSLCLPKGSLVAVIGEVGSGK 651 (1460)
Q Consensus 600 ~~~~~~~i~~~~~sf~w~~~~----------~-------~-----------~~~~~l~~i~l~i~~g~~~~ivG~~GsGK 651 (1460)
......++++|++|.|+... + . ..+++|+|+||+|++|++++|+|||||||
T Consensus 387 -~~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGK 465 (1490)
T TIGR01271 387 -NLTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGK 465 (1490)
T ss_pred -cCCCCceEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCH
Confidence 01123589999999996310 0 0 01357999999999999999999999999
Q ss_pred HHHHHHHhcCccCCCeEEEEeCcEEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000497 652 SSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 731 (1460)
Q Consensus 652 Stll~~l~g~~~~~~G~i~~~~~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~ 731 (1460)
||||++|+|+++|++|+|.++|+||||+|+||++++||+|||+||.++++++|++++++|+|++|++.+|+||+|.+|++
T Consensus 466 STLl~~l~G~~~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~ 545 (1490)
T TIGR01271 466 SSLLMMIMGELEPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEG 545 (1490)
T ss_pred HHHHHHHhCCCCCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000497 732 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 811 (1460)
Q Consensus 732 g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 811 (1460)
|.+|||||||||+||||+|++|++|||||||||||+++++++++.|+.+ +.+++|+|+|||+++.++.||+|++|++|+
T Consensus 546 g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~-~~~~~tvilvtH~~~~~~~ad~ii~l~~g~ 624 (1490)
T TIGR01271 546 GITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCK-LMSNKTRILVTSKLEHLKKADKILLLHEGV 624 (1490)
T ss_pred CCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-HhcCCeEEEEeCChHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999987655 567899999999999999999999999999
Q ss_pred EEEecCHHHHHhccccCccccc--------------------------c--c-----c-hh------hhhhhhhh-----
Q 000497 812 VKWIGSSADLAVSLYSGFWSTN--------------------------E--F-----D-TS------LHMQKQEM----- 846 (1460)
Q Consensus 812 i~~~g~~~~l~~~~~~~~~~~~--------------------------~--~-----~-~~------~~~~~~~~----- 846 (1460)
+++.|+++++......+..... + . + .. ...+..+.
T Consensus 625 i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (1490)
T TIGR01271 625 CYFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSI 704 (1490)
T ss_pred EEEEcCHHHHHhcChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999998754211100000 0 0 0 00 00000000
Q ss_pred --------------------------c--ccccch------hh----h-----hh--------------------hh---
Q 000497 847 --------------------------R--TNASSA------NK----Q-----IL--------------------LQ--- 860 (1460)
Q Consensus 847 --------------------------~--~~~~~~------~~----~-----~~--------------------~~--- 860 (1460)
+ .....+ .. + .. ..
T Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1490)
T TIGR01271 705 ILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNR 784 (1490)
T ss_pred cccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccccccc
Confidence 0 000000 00 0 00 00
Q ss_pred -----cc--cc--------------c-------C-CC-------c----c--hhhHHHHHHHhcccchhHHHHHHhhhhh
Q 000497 861 -----EK--DV--------------V-------S-VS-------D----D--AQEIIEVEQRKEGRVELTVYKNYAKFSG 898 (1460)
Q Consensus 861 -----~~--~~--------------~-------~-~~-------~----~--~~~~~~~e~~~~g~v~~~~y~~y~~~~g 898 (1460)
+. +. . . .. + + .....++|+++.|.++|++|++|+++.|
T Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g 864 (1490)
T TIGR01271 785 GENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNR 864 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcC
Confidence 00 00 0 0 00 0 0 0113455677889999999999999876
Q ss_pred H-HHHHHHHHHHHHHHHHHhhhhhhhhhhccccC-----C-CCC-----------CcchhhH-HHHHHHHHHHHHHHHHH
Q 000497 899 W-FITLVICLSAILMQASRNGNDLWLSYWVDTTG-----S-SQT-----------KYSTSFY-LVVLCIFCMFNSFLTLV 959 (1460)
Q Consensus 899 ~-~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~-----~-~~~-----------~~~~~~~-l~~~~~l~~~~~~~~~~ 959 (1460)
+ ..+++++++.++.+++..++++|+.+|..... . .+. .....+| +.+|+++.++..++.++
T Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1490)
T TIGR01271 865 NLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFF 944 (1490)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHH
Confidence 5 44444456667778899999999999875210 0 000 0011233 44555555556677778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHH
Q 000497 960 RAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQ 1039 (1460)
Q Consensus 960 ~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~ 1039 (1460)
+.+++...+.++++++|++++++++++|++||+++|+|+++|||++|++.+|+.+|..+..++..++.+++.++++++..
T Consensus 945 ~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~ 1024 (1490)
T TIGR01271 945 RGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQ 1024 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1040 VFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSE 1119 (1460)
Q Consensus 1040 ~~~~~~~ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~ 1119 (1460)
|+++++++|++++++.++++|.+++|++++++..+++|+++|+.|+++|+.|||+||++++|.+++.+..+.+++..+..
T Consensus 1025 p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1490)
T TIGR01271 1025 PYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLY 1104 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99998899998899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1120 LTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLE 1199 (1460)
Q Consensus 1120 ~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~ 1199 (1460)
...++|+..++++++.+++..++++++.. ....+|.+|++++|++.+...++++++.+.++|+.+.|++|+.+
T Consensus 1105 ~~~~~wl~~~~~~i~~~~~~~~~~l~~~~-------~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~ 1177 (1490)
T TIGR01271 1105 LSTLRWFQMRIDIIFVFFFIAVTFIAIGT-------NQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFK 1177 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988765544433333321 12346779999999999999999999999999999999999999
Q ss_pred hhcCccccccc----------------CCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCCh
Q 000497 1200 YMDVPQEELCG----------------YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAG 1263 (1460)
Q Consensus 1200 ~~~~~~E~~~~----------------~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSG 1263 (1460)
|.+.|+|+... ...+++.||.+|.|+|+||+|+|+++.+++|+||||+|+||||||||||||||
T Consensus 1178 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsG 1257 (1490)
T TIGR01271 1178 FIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSG 1257 (1490)
T ss_pred HhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCC
Confidence 99887764211 01234579999999999999999987789999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHH
Q 000497 1264 KSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEV 1343 (1460)
Q Consensus 1264 KSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i 1343 (1460)
||||+++|+|+++ ++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+++|+||+++++++++
T Consensus 1258 KSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i 1336 (1490)
T TIGR01271 1258 KSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVI 1336 (1490)
T ss_pred HHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHH
Confidence 9999999999998 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHh
Q 000497 1344 EAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL 1421 (1460)
Q Consensus 1344 ~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~ 1421 (1460)
+++ ||||.++|+|.||||||||||||||||||+|+|||||||||+||.+||+.||++|++.+++||||+||||++++.
T Consensus 1337 ~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~ 1416 (1490)
T TIGR01271 1337 EQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALL 1416 (1490)
T ss_pred HhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH
Confidence 998 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhhC
Q 000497 1422 NMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1459 (1460)
Q Consensus 1422 ~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1459 (1460)
+||||+|||+|+|+|+|+|++|++ ++|.|++|+++++
T Consensus 1417 ~~DrIlvL~~G~ivE~g~p~~Ll~-~~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1417 ECQQFLVIEGSSVKQYDSIQKLLN-ETSLFKQAMSAAD 1453 (1490)
T ss_pred hCCEEEEEECCEEEEeCCHHHHHc-CCcHHHHHHHHhC
Confidence 999999999999999999999997 4789999999875
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.6e-185 Score=1884.42 Aligned_cols=1250 Identities=32% Similarity=0.527 Sum_probs=1069.3
Q ss_pred CCCCCCCCChhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhh-------------------
Q 000497 202 NTDSGNNQSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRS------------------- 262 (1460)
Q Consensus 202 ~~~~e~~~~~~s~~~f~Wl~~l~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~------------------- 262 (1460)
.+.||+++||+.|+++.|++|++.+..|..|+.+|||+-..+.++-++..++.+..+++..
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (1560)
T PTZ00243 58 TPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLDA 137 (1560)
T ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeeccc
Confidence 4579999999999999999999999999999999999988888876666555443322100
Q ss_pred --------------------------------c-----------------------------------------------
Q 000497 263 --------------------------------C----------------------------------------------- 263 (1460)
Q Consensus 263 --------------------------------~----------------------------------------------- 263 (1460)
+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (1560)
T PTZ00243 138 SSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSST 217 (1560)
T ss_pred cccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeeccc
Confidence 0
Q ss_pred ----------CCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CchhHHHHHHHHHHHHHH
Q 000497 264 ----------NCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGS-GHLDGYVLAIALGLTSIL 332 (1460)
Q Consensus 264 ----------~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~-~~~~g~~l~~~l~~~~~~ 332 (1460)
..+..+|+++++++|++.++..++++++.+++.+++|++++.++++++++. ....|+++++++++++++
T Consensus 218 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~~ 297 (1560)
T PTZ00243 218 GSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQLI 297 (1560)
T ss_pred ccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHH
Confidence 012247999999999999999999999999999999999999999997633 334578888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC--CCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 333 KSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERS--EFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVA 410 (1460)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~--~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~ 410 (1460)
++++.++|.|...+.+.++|++|...||+|+++++..+.. +.++|+++|+|++|++++..+..++|.+|..|++++++
T Consensus 298 ~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~~ 377 (1560)
T PTZ00243 298 QSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLLS 377 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887664 56889999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHH
Q 000497 411 LYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSS 490 (1460)
Q Consensus 411 ~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~ 490 (1460)
+++||+.+|+++++|++++++++|++.++++++.+.++++++++|+|++.++|+++|||+||+||||+.|.+++++.|++
T Consensus 378 ~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~ 457 (1560)
T PTZ00243 378 ILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRAR 457 (1560)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 491 EVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRL 570 (1460)
Q Consensus 491 El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri 570 (1460)
|++.+++..+...+..++++++|.++.+++|++|.+.++.||++.+||++++|++++.|+.++|..++.+.++++|++||
T Consensus 458 El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI 537 (1560)
T PTZ00243 458 ELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRI 537 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCCCchh----hhh-----hcCCCCcc-----cC-------------------C--------------CccCCCC
Q 000497 571 TRFLGCSEYKHE----LEQ-----AANSPSYI-----SN-------------------G--------------LSNFNSK 603 (1460)
Q Consensus 571 ~~fL~~~e~~~~----~~~-----~~~~~~~~-----~~-------------------~--------------~~~~~~~ 603 (1460)
++||+.+|.... ... ....+... .+ . .......
T Consensus 538 ~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (1560)
T PTZ00243 538 STFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHP 617 (1560)
T ss_pred HHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccc
Confidence 999987763210 000 00000000 00 0 0000011
Q ss_pred CceEEEEcceEeccCCCc----------------------------------cccccceeeeeeEecCCcEEEEEcCCCC
Q 000497 604 DMAVIMQDATCSWYCNNE----------------------------------EEQNVVLNQVSLCLPKGSLVAVIGEVGS 649 (1460)
Q Consensus 604 ~~~i~~~~~sf~w~~~~~----------------------------------~~~~~~l~~i~l~i~~g~~~~ivG~~Gs 649 (1460)
...+.++|++|+|+.... ...+++|+|+||++++|++++|+|||||
T Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGs 697 (1560)
T PTZ00243 618 SPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGS 697 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCC
Confidence 234677888887652100 0123579999999999999999999999
Q ss_pred cHHHHHHHHhcCccCCCeEEEEeCcEEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCccccc
Q 000497 650 GKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIG 729 (1460)
Q Consensus 650 GKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg 729 (1460)
||||||++|+|+++|++|+|.++++||||+|+||++++||+|||.|+.++|+++|++++++|+|+.|++.+|+|++|.+|
T Consensus 698 GKSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~ 777 (1560)
T PTZ00243 698 GKSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEIG 777 (1560)
T ss_pred cHHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHhc
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred CCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeC
Q 000497 730 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 809 (1460)
Q Consensus 730 ~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~ 809 (1460)
++|.+|||||||||+||||+|++|++||||||||+||++++++++++++.+ ..+++|+|++||+++.++.||+|++|++
T Consensus 778 ~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~-~~~~~TvIlvTH~~~~~~~ad~ii~l~~ 856 (1560)
T PTZ00243 778 EKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLG-ALAGKTRVLATHQVHVVPRADYVVALGD 856 (1560)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHH-hhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999987665 4568999999999999999999999999
Q ss_pred CeEEEecCHHHHHhccccCccccccc---ch--hhhhhhh--hhccccc---c-h---hhhhhh-hcccccCCCcchhhH
Q 000497 810 GQVKWIGSSADLAVSLYSGFWSTNEF---DT--SLHMQKQ--EMRTNAS---S-A---NKQILL-QEKDVVSVSDDAQEI 874 (1460)
Q Consensus 810 G~i~~~g~~~~l~~~~~~~~~~~~~~---~~--~~~~~~~--~~~~~~~---~-~---~~~~~~-~~~~~~~~~~~~~~~ 874 (1460)
|++.++|+++++..... +..+.... .. ......+ ....... . . ..+... ...+.........+.
T Consensus 857 G~i~~~G~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 935 (1560)
T PTZ00243 857 GRVEFSGSSADFMRTSL-YATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGRL 935 (1560)
T ss_pred CEEEEecCHHHHHhChH-HHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence 99999999999875421 11111000 00 0000000 0000000 0 0 000000 000000001112344
Q ss_pred HHHHHHhcccchhHHHHHHhhhhhHHH-HHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHH
Q 000497 875 IEVEQRKEGRVELTVYKNYAKFSGWFI-TLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFN 953 (1460)
Q Consensus 875 ~~~e~~~~g~v~~~~y~~y~~~~g~~~-~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~ 953 (1460)
.++|+++.|.++|++|++|++..|... .+.+++..++.+++..++++|+++|++... ......|+++|+++.++.
T Consensus 936 ~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~----~~~~~~~l~~y~~~~~~~ 1011 (1560)
T PTZ00243 936 MTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSF----KLSAATYLYVYLGIVLLG 1011 (1560)
T ss_pred hhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----CCCcccHHHHHHHHHHHH
Confidence 566777889999999999999876443 334444555667788889999999987431 122346888888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhh
Q 000497 954 SFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAV 1033 (1460)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~ 1033 (1460)
.++.+++.+.....+.++++++|+.++++++++|++|||++++|+++|||++|++.+|+.++..+..++..++.+++.++
T Consensus 1012 ~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li 1091 (1560)
T PTZ00243 1012 TFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSIL 1091 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777778888999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHH
Q 000497 1034 VLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQ 1113 (1460)
Q Consensus 1034 ~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~ 1113 (1460)
++++..|+++++++|+.++++.++++|.+.+|+++|.+..+++|+++++.|+++|+.|||+|+++++|.+++.+..|.+.
T Consensus 1092 ~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~ 1171 (1560)
T PTZ00243 1092 VTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVY 1171 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 88888898888888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1114 RTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVS 1193 (1460)
Q Consensus 1114 ~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s 1193 (1460)
++.+.....++|+..+++++..+++.+++++.+..... .....++|.++++++|+..+...++++++.+.++|+.++|
T Consensus 1172 ~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s 1249 (1560)
T PTZ00243 1172 SCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTML--RATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNS 1249 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998876554444333322110 1122468899999999999999999999999999999999
Q ss_pred HHHHHHhhcC-ccccccc-------------------------CCCCC---CCCCCCccEEEEEEEEEecCCCCccceee
Q 000497 1194 LERVLEYMDV-PQEELCG-------------------------YQSLS---PDWPFQGLIEFQNVTMRYKPSLPAALHDI 1244 (1460)
Q Consensus 1194 veRi~~~~~~-~~E~~~~-------------------------~~~~~---~~wp~~g~I~f~nvs~~Y~~~~~~vL~~i 1244 (1460)
++|+.+|.+. |+|+... ...++ +.||..|.|+|+||+|+|+++.++||+||
T Consensus 1250 ~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~v 1329 (1560)
T PTZ00243 1250 VERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGV 1329 (1560)
T ss_pred HHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecc
Confidence 9999999964 3332100 01112 23557799999999999988777899999
Q ss_pred EEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCCC
Q 000497 1245 NFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM 1324 (1460)
Q Consensus 1245 sl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~ 1324 (1460)
||+|+||||||||||||||||||+++|+|+++|++|+|+|||+||++++++++|++|++|||||+||+||||+||||+++
T Consensus 1330 sf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~ 1409 (1560)
T PTZ00243 1330 SFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLE 1409 (1560)
T ss_pred eEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccC-CCEEEEeccccCCCHHHHHHHHHHH
Q 000497 1325 NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKS-SKVLCLDECTANVDAQTASILQNAI 1401 (1460)
Q Consensus 1325 ~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~-~~ILlLDEaTS~lD~~te~~Iq~~I 1401 (1460)
++|+|+|+|+++|+++++++++ ||||.++|+|.|||||||||||||||||++ |+|||||||||+||.+||+.||++|
T Consensus 1410 ~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L 1489 (1560)
T PTZ00243 1410 ASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATV 1489 (1560)
T ss_pred CCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHH
Confidence 9999999999999999999998 999999999999999999999999999996 8999999999999999999999999
Q ss_pred HHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhhC
Q 000497 1402 SSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1459 (1460)
Q Consensus 1402 ~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1459 (1460)
++.|++||||+||||++++.+||||+|||+|+|+|+|+|+||+++++|.|++|++++|
T Consensus 1490 ~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1490 MSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALG 1547 (1560)
T ss_pred HHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999987889999999876
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.7e-145 Score=1366.16 Aligned_cols=1156 Identities=21% Similarity=0.258 Sum_probs=846.6
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhccCCC------chhHHHHHHHHHHHHHHHHHHH-H
Q 000497 269 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLN---KLIKFLQQGSG------HLDGYVLAIALGLTSILKSFFD-T 338 (1460)
Q Consensus 269 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~---~li~~~~~~~~------~~~g~~l~~~l~~~~~~~~~~~-~ 338 (1460)
++++-...+-++++++..+..++..+.+..+|++.- ++.+.+....+ ...-.++.+.+.+..++.+++. .
T Consensus 14 ~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~~lg~~~~~~~~~q~~ 93 (1228)
T KOG0055|consen 14 SFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFVYLGVGVFISGFIQVS 93 (1228)
T ss_pred chHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444455567777777777777888888887543 33443332111 1111111122222222222222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
Q 000497 339 QYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-----SFHDAWSLPFQIGVALYL 413 (1460)
Q Consensus 339 ~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-----~~~~~~~~pl~i~i~~~l 413 (1460)
.+.+...|...++|... .+..||...+.++....|++.+-|+.|+++|+++.. ++|.+-....-++++++.
T Consensus 94 c~~~~geRq~~riR~~y----l~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~ 169 (1228)
T KOG0055|consen 94 CWMRTGERQTARIRSKY----LKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYY 169 (1228)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666665554 555677778888888889999999999999998543 344433333334444433
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHH
Q 000497 414 LYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVK 493 (1460)
Q Consensus 414 L~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~ 493 (1460)
.|++ +++.+.+..++.......++.+.+...+.+++..+.-+...|++++||+|-.|+-|+...++..+.-+.-.+
T Consensus 170 -~W~L---tlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k 245 (1228)
T KOG0055|consen 170 -GWKL---TLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALK 245 (1228)
T ss_pred -HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHH
Confidence 3333 233344444444556677788888888888888899999999999999999999999888877665443344
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 494 HLSTRKYLDAWCVFFW--ATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLT 571 (1460)
Q Consensus 494 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~ 571 (1460)
...+......+...+. .+.......+|||..++..+..+++++|+.+...-.-...|.+....++.+..|+++..+|.
T Consensus 246 ~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~ 325 (1228)
T KOG0055|consen 246 FGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIF 325 (1228)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHH
Confidence 4333333333332222 12223345678887777788899999999886666667788888889999999999999999
Q ss_pred HhhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcH
Q 000497 572 RFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGK 651 (1460)
Q Consensus 572 ~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGK 651 (1460)
+-++.....+.... . ........+.|+++|+.|+||++++ .++|+|+||+|++|+.+++||||||||
T Consensus 326 ~~i~~~~~i~~~~~-~---------~~~~~~~~g~ief~nV~FsYPsRpd---v~Il~g~sl~i~~G~~valVG~SGsGK 392 (1228)
T KOG0055|consen 326 ETIDRKPSIDPYSK-G---------GRVLSSIKGEIEFRNVCFSYPSRPD---VKILKGVSLKIPSGQTVALVGPSGSGK 392 (1228)
T ss_pred HHhcCCCCCCcccc-c---------CCcccccccceEEEEEEecCCCCCc---chhhCCeEEEeCCCCEEEEECCCCCCH
Confidence 98865433221110 0 0011245678999999999998754 345999999999999999999999999
Q ss_pred HHHHHHHhcCccCCCeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHH
Q 000497 652 SSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDI 717 (1460)
Q Consensus 652 Stll~~l~g~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di 717 (1460)
||++++|.|+|+|++|+|.++| +||.|+|+|.||++||+|||.||+| .+.++..++++....++.+
T Consensus 393 ST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi 472 (1228)
T KOG0055|consen 393 STLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFI 472 (1228)
T ss_pred HHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHH
Confidence 9999999999999999999997 5999999999999999999999985 4788899999999999999
Q ss_pred hhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcch
Q 000497 718 SLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA 797 (1460)
Q Consensus 718 ~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~ 797 (1460)
..+|+|++|.+||+|..|||||||||||||||.++|+||||||||||||++.++. .+.++.. ..+|+|.|+|+||++.
T Consensus 473 ~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~-Vq~ALd~-~~~grTTivVaHRLSt 550 (1228)
T KOG0055|consen 473 LKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERV-VQEALDK-ASKGRTTIVVAHRLST 550 (1228)
T ss_pred HhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHH-HHHHHHH-hhcCCeEEEEeeehhh
Confidence 9999999999999999999999999999999999999999999999999997764 4554554 7789999999999999
Q ss_pred hhcCCEEEEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhh-hh----hcccccch--hhhhhhhcccc-c-CCC
Q 000497 798 ISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQK-QE----MRTNASSA--NKQILLQEKDV-V-SVS 868 (1460)
Q Consensus 798 l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~--~~~~~~~~~~~-~-~~~ 868 (1460)
+++||+|++|++|+|+|.|+|+||++..+.+.++.+.++.....+. ++ .+...... ........... . ...
T Consensus 551 IrnaD~I~v~~~G~IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~ 630 (1228)
T KOG0055|consen 551 IRNADKIAVMEEGKIVEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLL 630 (1228)
T ss_pred hhccCEEEEEECCEEEEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCccccccc
Confidence 9999999999999999999999999988777665432211110000 00 00000000 00000000000 0 000
Q ss_pred --cchhhHHHHHHHhcccchhHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCC---CCcchhh
Q 000497 869 --DDAQEIIEVEQRKEGRVELTVYKNYAKF--SGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQ---TKYSTSF 941 (1460)
Q Consensus 869 --~~~~~~~~~e~~~~g~v~~~~y~~y~~~--~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~---~~~~~~~ 941 (1460)
...++..++...+.. ....+++-++. ..|..+++..++.++..+....-.+.+++..+...... .......
T Consensus 631 ~~~~~~e~~~~~~~~~~--~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~ 708 (1228)
T KOG0055|consen 631 SVKPEGEDPEEPVSEED--EKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRA 708 (1228)
T ss_pred ccccccccccccccccc--ccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHH
Confidence 000000000000001 11122333331 24555555555555544443333333333222111011 1122345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc--cChhhHHHHHhhhhhhhccchHHHHH
Q 000497 942 YLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQ--TPGGRILNRFSSDLYMIDDSLPFILN 1019 (1460)
Q Consensus 942 ~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~--~~~G~ilnRfs~D~~~id~~l~~~l~ 1019 (1460)
|..+|+++++...++.++..+++.+++.+...++|.++|++++++++.|||. +. |.+.+|+++|...+...+...+.
T Consensus 709 ~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~ 787 (1228)
T KOG0055|consen 709 WALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLS 787 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999996 56 99999999999999998888888
Q ss_pred HHHHHHHhHHHhhhhHHHHHHHH---HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcchhHhHHHHhhcChHHHHhc
Q 000497 1020 ILLANFVGLLGIAVVLSYVQVFF---LLLLVPFWFIYSKLQFFYRS-TSRELRRLDSVSRSPIYASFTETLNGSSTIRAF 1095 (1460)
Q Consensus 1020 ~~~~~~~~~l~~~~~i~~~~~~~---~~~~ip~~~~~~~i~~~y~~-~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf 1095 (1460)
.++.++..++..+++-++..|-+ .+++.|++++..+.+..+.. .+++.+....+ .-....|++++++||++|
T Consensus 788 ~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~e----a~~iA~eai~NIrTV~al 863 (1228)
T KOG0055|consen 788 LVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEE----ASKIAIEAVSNIRTVAAL 863 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH----HHHHHHHHHHhHHHHHHH
Confidence 88888877777776666666654 45667777777666665443 33333332211 124568999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHH
Q 000497 1096 KSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVS 1175 (1460)
Q Consensus 1096 ~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~ 1175 (1460)
+.|++|.+.|.+.++...+...... .|-++...+-..++.+.-++...++.. ....+..++..+...+..+..-..
T Consensus 864 ~~e~~~~~~y~~~l~~p~~~~~~~~---~i~gl~f~~sqs~~~~~~A~~f~~G~~-Li~~g~~~~~~~~~vf~~l~~ta~ 939 (1228)
T KOG0055|consen 864 CAEEKFMELYKEELEKPRKSSFKRG---LISGLGFGFSQSLLFFVYALSFWYGAR-LISNGEMTFEDVFRVFMALSFTAM 939 (1228)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhHH-HHhcCCcCHHHHHHHHHHHHHHHH
Confidence 9999999999999888877765442 344443333333222222222111111 011233455555444444444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEEEEEEEEecCC-CCccceeeEEEEeCCcEE
Q 000497 1176 LLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQV 1254 (1460)
Q Consensus 1176 ~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~Gekv 1254 (1460)
.+.......++.-++..|+.++++.++.+++-...........+.+|.|+|+||+|+||.. ..+||+|+||+|++||.+
T Consensus 940 ~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTv 1019 (1228)
T KOG0055|consen 940 ALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTV 1019 (1228)
T ss_pred HHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEE
Confidence 6677778889999999999999999987764321111111122468999999999999732 236999999999999999
Q ss_pred EEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCC-CCChHHHHHH
Q 000497 1255 GIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSV 1333 (1460)
Q Consensus 1255 gIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~-~~sd~ei~~a 1333 (1460)
|+||||||||||++.+|.|+|+|++|.|.|||.||+++++++||++|++|+|||.||++||||||.++. ..+.+||.+|
T Consensus 1020 ALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~A 1099 (1228)
T KOG0055|consen 1020 ALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEA 1099 (1228)
T ss_pred EEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999983 4689999999
Q ss_pred HHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEE
Q 000497 1334 LEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVI 1411 (1460)
Q Consensus 1334 L~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI 1411 (1460)
++.++.++||.++ ||||.+||+|.+||||||||||||||++|||||||||||||+||.++|+.+|++|++...+||.|
T Consensus 1100 ak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~I 1179 (1228)
T KOG0055|consen 1100 AKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTI 1179 (1228)
T ss_pred HHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEE
Confidence 9999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhhC
Q 000497 1412 TIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1459 (1460)
Q Consensus 1412 ~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1459 (1460)
+|||||+||++||.|+|+++|+|+|+|+|++|++ ++|.|++|++.+.
T Consensus 1180 vIAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~-~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1180 VIAHRLSTIQNADVIAVLKNGKVVEQGTHDELLA-KRGIYFRLVQLQS 1226 (1228)
T ss_pred EEecchhhhhcCCEEEEEECCEEEecccHHHHHh-CCCchHHHhhhcc
Confidence 9999999999999999999999999999999999 5679999998653
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.5e-133 Score=1361.25 Aligned_cols=1163 Identities=17% Similarity=0.209 Sum_probs=845.8
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 270 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 349 (1460)
Q Consensus 270 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (1460)
+++-..+.+++.++.+.++.++..++....|+++.++++.+..... ...+++.++++.++..++...+.+...+++.
T Consensus 50 ~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 126 (1466)
T PTZ00265 50 PFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGEN---VNDIIFSLVLIGIFQFILSFISSFCMDVVTT 126 (1466)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3343444556667777788888888888899999999987642211 1223334445556666777778888899999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHH
Q 000497 350 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY-LLYTQVKFAFVSGLA 427 (1460)
Q Consensus 350 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~-lL~~~lg~a~l~g~~ 427 (1460)
++...+...+|+|.++++...++..+.|++.+.++.|++.+...+. .+..+...++.++.++. +++....++. +.++
T Consensus 127 ~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lal-v~l~ 205 (1466)
T PTZ00265 127 KILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTL-CITC 205 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHHH
Confidence 9999999999999999999888888889999999999999887543 34445555544444332 3333333332 2233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 428 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 507 (1460)
Q Consensus 428 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 507 (1460)
++.+++.+..++.+++.+..++..+..++..+.+.|.++||++||.|+.|+.+.+++.+..+...+...+.....++...
T Consensus 206 ~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~ 285 (1466)
T PTZ00265 206 VFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIG 285 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445667778888888888888899999999999999999999999999998876655444444444444444322
Q ss_pred HHHHH--HHHHHHHHHHHHHHhCC--------CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 000497 508 FWATT--PTLFSLFTFGLFALMGH--------QLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCS 577 (1460)
Q Consensus 508 ~~~~~--~~~~~~~~f~~~~~~~~--------~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~ 577 (1460)
+.... ...+.++++|.+.+.++ .++++.+++.+........++..+...+..+..+.+|.+||.+.++.+
T Consensus 286 ~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~ 365 (1466)
T PTZ00265 286 MINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRK 365 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22222 22344567888877653 588898888765554445556666667889999999999999999765
Q ss_pred CCchhhhhhcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHH
Q 000497 578 EYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNS 657 (1460)
Q Consensus 578 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~ 657 (1460)
+..+.... ... . +....|+++|++|+|+.+++ .++|+|+||++++||+++|+||||||||||+++
T Consensus 366 ~~~~~~~~--~~~---------~-~~~~~I~~~nVsf~Y~~~~~---~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~l 430 (1466)
T PTZ00265 366 PLVENNDD--GKK---------L-KDIKKIQFKNVRFHYDTRKD---VEIYKDLNFTLTEGKTYAFVGESGCGKSTILKL 430 (1466)
T ss_pred CCCCCCCC--Ccc---------C-CCCCcEEEEEEEEEcCCCCC---CceeccceEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 42211000 000 0 11136999999999975422 346999999999999999999999999999999
Q ss_pred HhcCccCCCeEEEEe-C-------------cEEEEcCCCCCCCccHHHHHccCCC-------------------------
Q 000497 658 ILGEMMLTHGSIHAS-G-------------SIAYVPQVPWILSGTIRDNILFGKN------------------------- 698 (1460)
Q Consensus 658 l~g~~~~~~G~i~~~-~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~------------------------- 698 (1460)
|+|.++|++|+|.++ | .||||+|+|.+|++||+|||.+|..
T Consensus 431 L~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (1466)
T PTZ00265 431 IERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNK 510 (1466)
T ss_pred HHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccc
Confidence 999999999999994 3 4899999999999999999998741
Q ss_pred ---------------------------------CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHH
Q 000497 699 ---------------------------------YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 745 (1460)
Q Consensus 699 ---------------------------------~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~l 745 (1460)
.++++..++++.+++++.+..+|+|++|.+|++|.+|||||||||+|
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaI 590 (1466)
T PTZ00265 511 RNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISI 590 (1466)
T ss_pred cccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHH
Confidence 23456778888889999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhcCCEEEEEeCC--------------
Q 000497 746 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKG-------------- 810 (1460)
Q Consensus 746 ARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G-------------- 810 (1460)
|||++++|+|||||||||+||+++++.+.+. +.... .+++|+|+|||+++.+..||+|++|++|
T Consensus 591 ARAll~~P~ILlLDEpTSaLD~~se~~i~~~-L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~ 669 (1466)
T PTZ00265 591 ARAIIRNPKILILDEATSSLDNKSEYLVQKT-INNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGED 669 (1466)
T ss_pred HHHHhcCCCEEEEeCcccccCHHHHHHHHHH-HHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccc
Confidence 9999999999999999999999999988776 33311 2478999999999999999999999986
Q ss_pred ---------------------------------eEEEecCHHHHHh-ccccCcccccccchhhhhh-----hhhh--ccc
Q 000497 811 ---------------------------------QVKWIGSSADLAV-SLYSGFWSTNEFDTSLHMQ-----KQEM--RTN 849 (1460)
Q Consensus 811 ---------------------------------~i~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~-----~~~~--~~~ 849 (1460)
+|+++|+|+|+++ ..+.+..+........... .... +..
T Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~ 749 (1466)
T PTZ00265 670 PTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSS 749 (1466)
T ss_pred ccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccc
Confidence 5999999999997 4555544432211000000 0000 000
Q ss_pred c-c-ch-h---hhhhh---hccc------ccCCCcch-hhHHHH------HHH-hccc-c--hhHHHHHHhhhhhHHHHH
Q 000497 850 A-S-SA-N---KQILL---QEKD------VVSVSDDA-QEIIEV------EQR-KEGR-V--ELTVYKNYAKFSGWFITL 903 (1460)
Q Consensus 850 ~-~-~~-~---~~~~~---~~~~------~~~~~~~~-~~~~~~------e~~-~~g~-v--~~~~y~~y~~~~g~~~~~ 903 (1460)
. . .. . ..... .+.. .....++. .+...+ ++. +... . .+..+..++....+. ++
T Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 828 (1466)
T PTZ00265 750 AYKDSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKD-VT 828 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHH-HH
Confidence 0 0 00 0 00000 0000 00000000 000000 000 0000 1 111222333222222 22
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccccCC-CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 904 VICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTK 982 (1460)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~ 982 (1460)
+.+++.++..++....++.++.+.+.... .........|..++++++++..++.+++.++..+.+.+...+++..++++
T Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ 908 (1466)
T PTZ00265 829 IIALSILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFEN 908 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233444444555555556655542111 00111234567777778888888889999999999999999999999999
Q ss_pred HhcCccccccc--cChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 983 IVNAPVLFFDQ--TPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFY 1060 (1460)
Q Consensus 983 vl~~p~~ff~~--~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y 1060 (1460)
+++.|++|||+ +++|++++|+++|++.+...+...+..++..++.+++.++++++..|.++++++|+.++........
T Consensus 909 ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~ 988 (1466)
T PTZ00265 909 ILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIR 988 (1466)
T ss_pred HHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999996 8899999999999999999888888888888888877777777788877766655544332221111
Q ss_pred HH--HHHHHHHH-------------HHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1061 RS--TSRELRRL-------------DSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLW 1125 (1460)
Q Consensus 1061 ~~--~sr~l~rl-------------~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w 1125 (1460)
.+ ..++.++. +.+..+.....++|+++|++|||+|+.|+++.+++.+..+...+..........+
T Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1466)
T PTZ00265 989 ARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSM 1068 (1466)
T ss_pred HHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11111111 1222345567899999999999999999999999999998887766654443333
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 000497 1126 LSLRLQLLAAFIISFIATM-AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVP 1204 (1460)
Q Consensus 1126 l~~~l~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~ 1204 (1460)
+....+.+..+...++.++ ..+.. .+..+.|.+..++.+.+.....+..+...+.+++.+..+.+|+.++++.+
T Consensus 1069 ~~~~~~~~~~~~~~~~~~~G~~lv~-----~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~ 1143 (1466)
T PTZ00265 1069 LWGFSQSAQLFINSFAYWFGSFLIR-----RGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRK 1143 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3333333322211111111 11111 23345665555444444334456677888999999999999999999876
Q ss_pred ccccccC-CCCC--CCCCCCccEEEEEEEEEecCC-CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC---
Q 000497 1205 QEELCGY-QSLS--PDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--- 1277 (1460)
Q Consensus 1205 ~E~~~~~-~~~~--~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~--- 1277 (1460)
++..... ...+ ...+.+|.|+|+||+|+|+.. ..+||+|+||+|+|||++||||+||||||||+++|+|+|+|
T Consensus 1144 ~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~ 1223 (1466)
T PTZ00265 1144 SNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKND 1223 (1466)
T ss_pred CcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccc
Confidence 5421111 1111 112346889999999999743 24799999999999999999999999999999999999998
Q ss_pred ---------------------------------------------------CCceEEECCEeCCCCChHHHhcccEEEeC
Q 000497 1278 ---------------------------------------------------CGGQILVDGLNIINTPVRDLRGRFAVVPQ 1306 (1460)
Q Consensus 1278 ---------------------------------------------------~~G~I~IDG~di~~i~~~~lR~~i~iVpQ 1306 (1460)
++|+|+|||+||++++++++|++|+||||
T Consensus 1224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Q 1303 (1466)
T PTZ00265 1224 HHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQ 1303 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCC
Confidence 69999999999999999999999999999
Q ss_pred CCccCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000497 1307 SPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1383 (1460)
Q Consensus 1307 dp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1383 (1460)
||+||+|||||||.++. +.+|+|+++|++.++++++|.++ ||||.|||+|.+|||||||||||||||+|+|+|||||
T Consensus 1304 ep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1304 EPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred CCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999884 47999999999999999999999 9999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeC----CeE-EEEcChhHHhccCCcHHHHHHH
Q 000497 1384 ECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDH----GHL-VEQGNPQTLLQDECSVFSSFVR 1456 (1460)
Q Consensus 1384 EaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~----G~I-vE~G~p~eLl~~~~~~f~~l~~ 1456 (1460)
||||+||++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |++ +|.|+|+||+++++|.|++|++
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~ 1463 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVK 1463 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHh
Confidence 9999999999999999999873 69999999999999999999999999 995 5999999999865689999998
Q ss_pred hh
Q 000497 1457 AS 1458 (1460)
Q Consensus 1457 ~~ 1458 (1460)
.+
T Consensus 1464 ~~ 1465 (1466)
T PTZ00265 1464 LA 1465 (1466)
T ss_pred hc
Confidence 65
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.2e-88 Score=810.50 Aligned_cols=561 Identities=26% Similarity=0.368 Sum_probs=456.0
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 887 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFA 965 (1460)
Q Consensus 887 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~ 965 (1460)
+...+.|.+.-.+++...+ ++.++......+.+.++...++.... ............+..++.++.+++..++.+++.
T Consensus 135 ~~rl~~l~~~~~~~l~~a~-~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~ 213 (716)
T KOG0058|consen 135 LKRLLGLLKPEWKWLVAAF-VLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQ 213 (716)
T ss_pred HHHHHHHhchhHHHHHHHH-HHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555555444444433 23333334455555555544443221 111222233455667777888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHH-
Q 000497 966 FGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLL- 1044 (1460)
Q Consensus 966 ~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~- 1044 (1460)
+.+.+...++|..+|++++++.++|||.+.+|++++|++.|...+.+.++..+...+.+.+..++.+..+++.+|-+.+
T Consensus 214 ~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv 293 (716)
T KOG0058|consen 214 YAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLV 293 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998888886543
Q ss_pred --HHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1045 --LLVPFW-FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELT 1121 (1460)
Q Consensus 1045 --~~ip~~-~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~ 1121 (1460)
+.+|++ ++..++.++|++.+++.+. +-+.......|.+++++|||+|+.|+...++|.+.+++..+...+...
T Consensus 294 ~~i~~P~v~~~~~~yG~~~rklS~~~Q~----a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~ 369 (716)
T KOG0058|consen 294 TLIVVPIVALVAKIYGKYLRKLSKQTQD----ALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAV 369 (716)
T ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334433 3445556667777776654 333445677899999999999999999999998888877665543322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000497 1122 ASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM 1201 (1460)
Q Consensus 1122 ~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~ 1201 (1460)
..-.+....++.+......+ ..++.+ ....+.+++|.+...+.|...+...+.++...|.++-+..+|.+|++||+
T Consensus 370 a~~~f~~~~~~~~~~~~~si---L~~Gg~-Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~ 445 (716)
T KOG0058|consen 370 AYGIFFGSTNLLGNLAVLSI---LFYGGH-LVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELM 445 (716)
T ss_pred HhhHhHhHHHHHHhHHHHHH---HHhccc-hhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHh
Confidence 22222222222222211111 111111 12245678999999999999999999999999999999999999999999
Q ss_pred cCcccccccCCCCCCCCCCCccEEEEEEEEEecCC-CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCc
Q 000497 1202 DVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1280 (1460)
Q Consensus 1202 ~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G 1280 (1460)
|.+|.-... ....|. +.+|.|+|+||+|+|+.. ..+||||+||+|+|||.||+||||||||||++++|.|+|+|++|
T Consensus 446 dr~P~i~~~-G~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG 523 (716)
T KOG0058|consen 446 DRKPRIPLT-GTLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSG 523 (716)
T ss_pred ccCCCCCCC-Cccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 987653222 111222 568999999999999744 34699999999999999999999999999999999999999999
Q ss_pred eEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCC
Q 000497 1281 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1357 (1460)
Q Consensus 1281 ~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~ 1357 (1460)
+|++||+||++++.+.||++|++|.|||+||+|||||||.++. ..+||||.+|.++++.++||.++ |+||.|||+|.
T Consensus 524 ~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~ 603 (716)
T KOG0058|consen 524 RILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGS 603 (716)
T ss_pred eEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccc
Confidence 9999999999999999999999999999999999999998775 46899999999999999999999 99999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEE
Q 000497 1358 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1437 (1460)
Q Consensus 1358 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~ 1437 (1460)
.|||||||||||||||+|||+|||||||||+||.++|..+|++|.+..+++|||+|||||+||+.+|+|+|+|+|+|+|.
T Consensus 604 qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~ 683 (716)
T KOG0058|consen 604 QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEM 683 (716)
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhHHhccCCcHHHHHHHhh
Q 000497 1438 GNPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1438 G~p~eLl~~~~~~f~~l~~~~ 1458 (1460)
|+|+||+++++|.|++|++++
T Consensus 684 G~h~eLl~~~~gly~~Lv~~q 704 (716)
T KOG0058|consen 684 GTHDELLSKPNGLYAKLVQRQ 704 (716)
T ss_pred ccHHHHhhCcccHHHHHHHHh
Confidence 999999999999999999875
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.5e-79 Score=770.42 Aligned_cols=543 Identities=27% Similarity=0.400 Sum_probs=455.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000497 905 ICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIV 984 (1460)
Q Consensus 905 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl 984 (1460)
+++..++.+....+.+++....+|..-.............++++.++...++.+++.+++...+.|....+-.+++++++
T Consensus 159 v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~hll 238 (709)
T COG2274 159 VLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRHLL 238 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 33455566667777777777766643222222223333445666778888999999999999999999999999999999
Q ss_pred cCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHH----HHHHHHH
Q 000497 985 NAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIY----SKLQFFY 1060 (1460)
Q Consensus 985 ~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~----~~i~~~y 1060 (1460)
+.|++||.+.++|++++|+ +|++.|.+.+.......+..+...+..++++.+.+|.++++.+...+++ ...+.+.
T Consensus 239 ~Lpl~~f~~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l 317 (709)
T COG2274 239 RLPLSYFEKRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPLL 317 (709)
T ss_pred cCcHHHccCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 5688888877777666666666666666677777766554433333333 3334444
Q ss_pred HHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1061 RSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISF 1140 (1460)
Q Consensus 1061 ~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~ 1140 (1460)
++..++. .+..+...++..|++.|+.|||+.+.|.++..++++..++..+..+.......|.+....++..+....
T Consensus 318 ~~~~~~~----~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~ 393 (709)
T COG2274 318 RRKTRKL----IEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVL 393 (709)
T ss_pred HHHHHHH----HHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444443 334455678999999999999999999999999999999999999988888888777666655543322
Q ss_pred HHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCC
Q 000497 1141 IATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPF 1220 (1460)
Q Consensus 1141 ~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~ 1220 (1460)
+.++.+... ..+..+.|.+....+....+.+++..++..|++++....+.+|+.+.++.|+|+..+.. +...|+.
T Consensus 394 iL~~G~~lV----l~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~-~~~~~~~ 468 (709)
T COG2274 394 ILWFGAILV----LEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDKT-LIHLPKL 468 (709)
T ss_pred HHHHHHHHH----hcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc-ccccccc
Confidence 222211110 13456788888888888899999999999999999999999999999999998643321 3445678
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcc
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1300 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1300 (1460)
+|.|+|+||+|+|+++.+++|+|+|++|+|||+|||||+||||||||+++|.|+|+|++|+|++||+|+++++++++|++
T Consensus 469 ~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ 548 (709)
T COG2274 469 QGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQ 548 (709)
T ss_pred CceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhh
Confidence 99999999999999988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeCCCccCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1301 FAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1301 i~iVpQdp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
|+|||||++||+||||||+..++. .+|||+++|++.++++++|.++ ||||.++|+|.||||||||||+||||++++|
T Consensus 549 ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P 628 (709)
T COG2274 549 VGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKP 628 (709)
T ss_pred eeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCC
Confidence 999999999999999999988775 4679999999999999999999 9999999999999999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHh
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1457 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~ 1457 (1460)
+||||||||||||++||+.|.+.|.+..++||+|+||||+++++.||||+|||+|||+|.|+|+||++. +|.|+++++.
T Consensus 629 ~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~~l~~~ 707 (709)
T COG2274 629 KILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYARLYQQ 707 (709)
T ss_pred CEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cChHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 6799999986
Q ss_pred h
Q 000497 1458 S 1458 (1460)
Q Consensus 1458 ~ 1458 (1460)
+
T Consensus 708 q 708 (709)
T COG2274 708 Q 708 (709)
T ss_pred c
Confidence 5
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=9e-77 Score=754.58 Aligned_cols=542 Identities=26% Similarity=0.401 Sum_probs=437.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000497 907 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 986 (1460)
Q Consensus 907 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 986 (1460)
++.++........++++....+... ........+...++++.++..++.++..+...+.+.+...+++.++++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 98 (567)
T COG1132 21 LLLLLSALLSLLLPLLIGRIIDALL--ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLRL 98 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3344444555555666654444321 11112233444455555566667777777777778999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 987 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1066 (1460)
Q Consensus 987 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~ 1066 (1460)
|+++|++++.|++++|+++|++.++..+......+...++.+++.++++....|.+.++++....++......+.+..+.
T Consensus 99 ~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
T COG1132 99 PLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSRK 178 (567)
T ss_pred CHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998887775555555667777777777777766655544444444444444444466
Q ss_pred HHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1067 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1146 (1460)
Q Consensus 1067 l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1146 (1460)
..+....+.+.+.+.+.|+++|+++||+|+.++...+++.+..+...+...........+.....++..+....+.....
T Consensus 179 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (567)
T COG1132 179 LSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALGG 258 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677788999999999999999999999988888888777766665444444433333333333322221111111
Q ss_pred HhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEE
Q 000497 1147 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1226 (1460)
Q Consensus 1147 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f 1226 (1460)
... ..+..+.|.+...+.|...+..++..+...+..++....|.+|+.++.+.+++...... +.++..|.|+|
T Consensus 259 ~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~---~~~~~~~~I~f 331 (567)
T COG1132 259 FLV----LSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPD---PLKDTIGSIEF 331 (567)
T ss_pred HHH----HcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC---CCCCCCCeEEE
Confidence 110 12335688899999999999999999999999999999999999999988665322111 13456788999
Q ss_pred EEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeC
Q 000497 1227 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1306 (1460)
Q Consensus 1227 ~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQ 1306 (1460)
+||+|+|++ .+++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|.|||+||++++.+++|++|++|||
T Consensus 332 ~~vsf~y~~-~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Q 410 (567)
T COG1132 332 ENVSFSYPG-KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQ 410 (567)
T ss_pred EEEEEEcCC-CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcc
Confidence 999999975 3579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000497 1307 SPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1383 (1460)
Q Consensus 1307 dp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1383 (1460)
||+||+||||+||+++++ .+|||+++|++.++++|+++++ |+||.+||+|.+||||||||+|||||++|+|+|||||
T Consensus 411 d~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILD 490 (567)
T COG1132 411 DPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILD 490 (567)
T ss_pred cceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999999999976 6999999999999999999999 9999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhhC
Q 000497 1384 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1459 (1460)
Q Consensus 1384 EaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1459 (1460)
||||++|++||+.|++.+++..+++|+|+||||++|+++||+|+|||+|+|+|+|+|+||+++ +|.|++||+.++
T Consensus 491 EaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~~~~ 565 (567)
T COG1132 491 EATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQAQG 565 (567)
T ss_pred ccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHHHhh
Confidence 999999999999999999988889999999999999999999999999999999999999997 679999999865
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.5e-75 Score=747.62 Aligned_cols=563 Identities=19% Similarity=0.245 Sum_probs=433.8
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 890 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGS 968 (1460)
Q Consensus 890 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 968 (1460)
++.|.+...+.... .+++.++...+....++.+.+..+.... .........++.+++++.++..++.+++.+.....+
T Consensus 13 l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (588)
T PRK11174 13 LKQQSKPAKRWLNL-SILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAG 91 (588)
T ss_pred HHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455543333322 2234445555555566666555542110 011111223344455556667777788888888899
Q ss_pred HHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHH
Q 000497 969 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1048 (1460)
Q Consensus 969 ~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip 1048 (1460)
.+...+++.++++++++.|.++|++.++|++++|+++|++.+++.+...+..++..++.+++.++++.+.+|.+.++++.
T Consensus 92 ~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~ 171 (588)
T PRK11174 92 QHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLG 171 (588)
T ss_pred HHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888777777777777777777777777766554433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1049 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1128 (1460)
Q Consensus 1049 ~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~ 1128 (1460)
..++...+...+.+..++..+......+.+.+.+.|.++|+++||+|++|+.+.+++.+..++..+..........+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (588)
T PRK11174 172 TAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSA 251 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444444444444555677889999999999999999999999999999888887776655444444444
Q ss_pred HHHHHHHHHHHHH-HHHHHHhhcCCCCCCc----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 000497 1129 RLQLLAAFIISFI-ATMAVIGSRGNLPATF----STPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV 1203 (1460)
Q Consensus 1129 ~l~~~~~~~~~~~-~~~~v~~~~~~~~~~~----~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~ 1203 (1460)
...++..+.+.++ ....... .+....+. .+.....+++.++..+..++..+...+.++.....+.+|+.++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 330 (588)
T PRK11174 252 VLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLET 330 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3333333222111 1111111 11111111 1222333344566677788999999999999999999999999987
Q ss_pred cccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEE
Q 000497 1204 PQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1283 (1460)
Q Consensus 1204 ~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ 1283 (1460)
++++...... +.+.+..+.|+|+||+|.|.++ +++|+|+||+|+|||++||||+||||||||+++|+|++ |++|+|.
T Consensus 331 ~~~~~~~~~~-~~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~ 407 (588)
T PRK11174 331 PLAHPQQGEK-ELASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLK 407 (588)
T ss_pred CCcccCCCcc-ccCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEE
Confidence 6643211111 1111234679999999888654 57999999999999999999999999999999999999 9999999
Q ss_pred ECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCC
Q 000497 1284 VDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFS 1360 (1460)
Q Consensus 1284 IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LS 1360 (1460)
+||+|+++++.+++|++|+||||||++|+|||||||.+++ +.+|+|+++|++.|+++++++++ |+||.+||+|.+||
T Consensus 408 i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LS 487 (588)
T PRK11174 408 INGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLS 487 (588)
T ss_pred ECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCC
Confidence 9999999999999999999999999999999999999884 58999999999999999999999 99999999999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcCh
Q 000497 1361 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNP 1440 (1460)
Q Consensus 1361 gGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p 1440 (1460)
|||||||+||||++++|+|||||||||+||.+|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|
T Consensus 488 GGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G~~ 567 (588)
T PRK11174 488 VGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQGDY 567 (588)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecCCH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred hHHhccCCcHHHHHHHhh
Q 000497 1441 QTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1441 ~eLl~~~~~~f~~l~~~~ 1458 (1460)
+||++++ +.|+++++.+
T Consensus 568 ~eL~~~~-~~y~~l~~~q 584 (588)
T PRK11174 568 AELSQAG-GLFATLLAHR 584 (588)
T ss_pred HHHHhcc-hHHHHHHHHh
Confidence 9999865 6999999765
No 13
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.5e-75 Score=755.60 Aligned_cols=540 Identities=26% Similarity=0.371 Sum_probs=435.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 904 VICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 983 (1460)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~v 983 (1460)
..+++.++...+....+++.+...+..............+..++++.++..++..++.+.+.+.+.+...++|+++++++
T Consensus 165 ~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~l 244 (711)
T TIGR00958 165 SAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLRIREDLFRSL 244 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345555666666667777666553221111111222334455556667777778888888999999999999999999
Q ss_pred hcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 984 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1063 (1460)
Q Consensus 984 l~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~ 1063 (1460)
++.|++||+++++|+++||+++|++.+++.+...+..++..++.+++.++++.+.+|.+.++++....+...+.+.+.+.
T Consensus 245 l~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~~~~~~~~~~ 324 (711)
T TIGR00958 245 LRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVFLAEKVFGKR 324 (711)
T ss_pred HcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888888888888888888888888876655444444334444444444
Q ss_pred HHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q 000497 1064 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTAS---LWLSLRLQLLAAFIISF 1140 (1460)
Q Consensus 1064 sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~---~wl~~~l~~~~~~~~~~ 1140 (1460)
.++..+...+..+...+++.|+++|+++||+|++|+++.+++.+..++..+......... .|....+..+..+++..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 404 (711)
T TIGR00958 325 YQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLGMLIQVLVLY 404 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444555667789999999999999999999999999998888777655443222 23322222222222222
Q ss_pred HHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCC
Q 000497 1141 IATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPF 1220 (1460)
Q Consensus 1141 ~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~ 1220 (1460)
+....+. .+..+.|.+..++.|...+..++..+...+.++.+...+.+|+.++++.+++...... ...++.
T Consensus 405 ~g~~lv~-------~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~ 475 (711)
T TIGR00958 405 YGGQLVL-------TGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGT--LAPLNL 475 (711)
T ss_pred HHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--CCCCCC
Confidence 2111121 2456788888889999999999999999999999999999999999987665322111 122456
Q ss_pred CccEEEEEEEEEecCC-CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhc
Q 000497 1221 QGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRG 1299 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~ 1299 (1460)
+|.|+|+||+|+|+++ .+++|+|+||+|+|||++|||||||||||||+++|+|+++|++|+|.+||+|+++++.+++|+
T Consensus 476 ~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~ 555 (711)
T TIGR00958 476 EGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHR 555 (711)
T ss_pred CCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHh
Confidence 7889999999999753 357999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEeCCCccCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1300 RFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1300 ~i~iVpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
+|++|||||++|+|||||||.++. ..+|+++++++++++++++++++ |+||.+||+|.+||||||||++||||++++
T Consensus 556 ~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~ 635 (711)
T TIGR00958 556 QVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRK 635 (711)
T ss_pred hceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999998764 46899999999999999999998 999999999999999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHH
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1455 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~ 1455 (1460)
|+|||||||||+||++|++.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|+||++++ +.|++|+
T Consensus 636 p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~-~~y~~lv 711 (711)
T TIGR00958 636 PRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQ-GCYKHLV 711 (711)
T ss_pred CCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCC-CchHhcC
Confidence 99999999999999999999998 3445799999999999999999999999999999999999999865 6898874
No 14
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.6e-74 Score=749.18 Aligned_cols=540 Identities=21% Similarity=0.245 Sum_probs=434.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000497 907 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 986 (1460)
Q Consensus 907 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 986 (1460)
+..++........++.+....|..-..........++.+++++.++..++.+++.+.....+.+...+++..+++++++.
T Consensus 143 ~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~ 222 (686)
T TIGR03797 143 AMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRLLRL 222 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34444555555566666555543211111111223344555666667788888888999999999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 987 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1066 (1460)
Q Consensus 987 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~ 1066 (1460)
|++||++.++|++++|++ |++.+.+.+...+...+..+..+++.++++++.+|++.++++.+.+++..+...+.+..+.
T Consensus 223 ~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~ 301 (686)
T TIGR03797 223 PVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLLQVR 301 (686)
T ss_pred CHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 7888888777666565555555556666666777766554443333333333223222223
Q ss_pred HHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1067 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1146 (1460)
Q Consensus 1067 l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1146 (1460)
..+......+...+++.|+++|+.+||+|+.|+++.+++.+..++..+..+.....+.|.......+..+...++.++..
T Consensus 302 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~ 381 (686)
T TIGR03797 302 KERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFAAAI 381 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344556789999999999999999999999999999999988888887777777666555544332222211111
Q ss_pred HhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEE
Q 000497 1147 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1226 (1460)
Q Consensus 1147 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f 1226 (1460)
... ..+..+.|.+..+..+...+..++..+...+.++.....+.+|+.++++.++|...... ...+..|.|+|
T Consensus 382 ~lv----~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~---~~~~~~~~I~~ 454 (686)
T TIGR03797 382 SLL----GGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAKT---DPGKLSGAIEV 454 (686)
T ss_pred HHH----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcC---CCCCCCceEEE
Confidence 100 12445688888888888899999999999999999999999999999987766422111 11234678999
Q ss_pred EEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeC
Q 000497 1227 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1306 (1460)
Q Consensus 1227 ~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQ 1306 (1460)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|+++++|||
T Consensus 455 ~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q 534 (686)
T TIGR03797 455 DRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQ 534 (686)
T ss_pred EEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEcc
Confidence 99999997666789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000497 1307 SPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1384 (1460)
Q Consensus 1307 dp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDE 1384 (1460)
||.+|+|||||||.++++.+|++++++++.++++++++++ |+||.+||+|.+||||||||++||||++++|+||||||
T Consensus 535 ~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDE 614 (686)
T TIGR03797 535 NGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDE 614 (686)
T ss_pred CCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 9999999999999988778999999999999999999998 99999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHh
Q 000497 1385 CTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1457 (1460)
Q Consensus 1385 aTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~ 1457 (1460)
|||+||++||+.+++.|++. ++|+|+||||++++..||||+|||+|+|+|.|+|+||+++ +|.|++|++.
T Consensus 615 pTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~~y~~l~~~ 684 (686)
T TIGR03797 615 ATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EGLFAQLARR 684 (686)
T ss_pred CccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-CcHHHHHHHh
Confidence 99999999999999999876 6899999999999999999999999999999999999985 5799999975
No 15
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.6e-74 Score=749.35 Aligned_cols=541 Identities=22% Similarity=0.308 Sum_probs=438.3
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000497 907 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 986 (1460)
Q Consensus 907 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 986 (1460)
+..++..+.....+++.+...+.............++.+++++.++..++.+++.++....+.+...+++.++++++++.
T Consensus 161 ~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l 240 (710)
T TIGR03796 161 LAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIKLAVGMSARFLWHILRL 240 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33444445555556666665553211111111223344555566667788888889999999999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 987 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1066 (1460)
Q Consensus 987 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~ 1066 (1460)
|++||++.++|++++|++.| +.+.+.+...+...+..++.+++.++++.+.+|+++++.+...+++..+...+.+..+.
T Consensus 241 ~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~ 319 (710)
T TIGR03796 241 PVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSRRRVD 319 (710)
T ss_pred CHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 56777777667677777777777777777777777665555444444444444444444
Q ss_pred HHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1067 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1146 (1460)
Q Consensus 1067 l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1146 (1460)
..+......+...+++.|+++|+.+||++++|+.+.+++.+..++..+..+.......|.......+..+...++.++..
T Consensus 320 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~ 399 (710)
T TIGR03796 320 ANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILVVGG 399 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455667789999999999999999999999999998888887777766666666555555444332222111111
Q ss_pred HhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccC----C-CCCCCCCCC
Q 000497 1147 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGY----Q-SLSPDWPFQ 1221 (1460)
Q Consensus 1147 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~----~-~~~~~wp~~ 1221 (1460)
... ..+..+.|.+..+..+...+..++..+...+.++.....+.+|+.++++.++|..... . ...+.++.+
T Consensus 400 ~~v----~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~ 475 (710)
T TIGR03796 400 LRV----MEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLS 475 (710)
T ss_pred HHH----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCC
Confidence 100 1244578888888889999999999999999999999999999999998877643221 0 011113456
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
|.|+|+||+|+|+++.+++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|+++
T Consensus 476 ~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i 555 (710)
T TIGR03796 476 GYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSV 555 (710)
T ss_pred CeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhhe
Confidence 89999999999987667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCccCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1302 AVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1302 ~iVpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
+||||||++|+|||||||.+++ ..+|++++++++.++++++++++ |+||.++|+|.+|||||||||+||||++++|+
T Consensus 556 ~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~ 635 (710)
T TIGR03796 556 AMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPS 635 (710)
T ss_pred eEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCC
Confidence 9999999999999999998875 47899999999999999999998 99999999999999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHH
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1455 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~ 1455 (1460)
|||||||||+||.+||+.|.+.|++ .++|+|+||||++++..||||+|||+|+|+|.|+|+||+++ ++.|++|+
T Consensus 636 iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 636 ILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELWAV-GGAYARLI 709 (710)
T ss_pred EEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHHHc-CCcHHHHh
Confidence 9999999999999999999999987 58999999999999999999999999999999999999986 46899987
No 16
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=9.7e-74 Score=744.39 Aligned_cols=557 Identities=25% Similarity=0.338 Sum_probs=436.6
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 887 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 966 (1460)
Q Consensus 887 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 966 (1460)
+..+..|++...+.. ..+++..++..++....+++++.+.|..-..........+..+++++.++..++.+++.++...
T Consensus 144 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (708)
T TIGR01193 144 LLKFIPLITRQKKLI-VNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNV 222 (708)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444554333322 2233444555566666777887777643211111112223344455556677788888888899
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHH
Q 000497 967 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1046 (1460)
Q Consensus 967 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ 1046 (1460)
.+.+...+++.++++++++.|+.||++.++|++++|++ |.+.+.+.+...+...+..+..++..++++.+.+|.+++++
T Consensus 223 ~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~ 301 (708)
T TIGR01193 223 LGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLS 301 (708)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999998 78777766655555555555555555555666666655544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1047 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1126 (1460)
Q Consensus 1047 ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1126 (1460)
+..++++..+...+.+..++..+......+...+++.|+++|+.+||+||.|+.+.+++.+..++..+..+.......+.
T Consensus 302 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (708)
T TIGR01193 302 LLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQ 381 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333334444444444455556677889999999999999999999999999888887777766554444333
Q ss_pred HHHHHHHH---HHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 000497 1127 SLRLQLLA---AFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV 1203 (1460)
Q Consensus 1127 ~~~l~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~ 1203 (1460)
.....++. .+++..++...+. .+..+.|.+..+..+...+..++..+...+.++.....+++|+.++.+.
T Consensus 382 ~~~~~~~~~~~~i~il~~g~~lv~-------~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 454 (708)
T TIGR01193 382 QAIKAVTKLILNVVILWTGAYLVM-------RGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLV 454 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33222222 2222222222221 3456788888888899999999999999999999999999999999988
Q ss_pred cccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEE
Q 000497 1204 PQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1283 (1460)
Q Consensus 1204 ~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ 1283 (1460)
++|..... ...+.++..|.|+|+||+|+|++ .+++|+|+||+|+|||++||+||||||||||+++|+|+|+|++|+|+
T Consensus 455 ~~e~~~~~-~~~~~~~~~~~I~~~~vsf~y~~-~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~ 532 (708)
T TIGR01193 455 DSEFINKK-KRTELNNLNGDIVINDVSYSYGY-GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEIL 532 (708)
T ss_pred CCcccccc-cccCCCCCCCcEEEEEEEEEcCC-CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEE
Confidence 77643221 11223455789999999999964 35799999999999999999999999999999999999999999999
Q ss_pred ECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcC--CCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCC
Q 000497 1284 VDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF--HMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISF 1359 (1460)
Q Consensus 1284 IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~--~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~L 1359 (1460)
+||+|+++++.+++|++++||||||++|+|||||||.++ ...+|++++++++.++++++++++ |+||.++|+|.+|
T Consensus 533 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~L 612 (708)
T TIGR01193 533 LNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSI 612 (708)
T ss_pred ECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCC
Confidence 999999999999999999999999999999999999987 357899999999999999999998 9999999999999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcC
Q 000497 1360 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGN 1439 (1460)
Q Consensus 1360 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~ 1439 (1460)
|||||||++||||++++|+|||||||||+||.+|++.+++.|++ .+++|+|+||||++++..||+|+||++|+++|.|+
T Consensus 613 SgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~-~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~ 691 (708)
T TIGR01193 613 SGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLN-LQDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGS 691 (708)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHH-hcCCEEEEEecchHHHHcCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999999987 47899999999999999999999999999999999
Q ss_pred hhHHhccCCcHHHHHHH
Q 000497 1440 PQTLLQDECSVFSSFVR 1456 (1460)
Q Consensus 1440 p~eLl~~~~~~f~~l~~ 1456 (1460)
|+||+++ +|.|++|++
T Consensus 692 ~~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 692 HDELLDR-NGFYASLIH 707 (708)
T ss_pred HHHHHhc-CCcHHHHhh
Confidence 9999986 479999986
No 17
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.2e-73 Score=725.19 Aligned_cols=543 Identities=24% Similarity=0.349 Sum_probs=430.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 905 ICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYST--SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTK 982 (1460)
Q Consensus 905 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~--~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~ 982 (1460)
.+++.++........++++....+........... ..++.+++++.++..++.+.+.+.....+.+...+++.+++++
T Consensus 28 ~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 107 (592)
T PRK10790 28 AVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMDA 107 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555666666777777766632111111111 1112234444455566677777788888899999999999999
Q ss_pred HhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 983 IVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRS 1062 (1460)
Q Consensus 983 vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~ 1062 (1460)
+++.|.++|++.+.|++++|+++|++.+++.+...+..++..+..+++.++++.+.+|++.++++....+...+...+.+
T Consensus 108 l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~ 187 (592)
T PRK10790 108 ALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQR 187 (592)
T ss_pred HHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888888887777777777777777776544332222111112222222
Q ss_pred HHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 000497 1063 TSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL-SLRLQLLAAFIISFI 1141 (1460)
Q Consensus 1063 ~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl-~~~l~~~~~~~~~~~ 1141 (1460)
..+...+......+....++.|+++|+.+||+|+.|+++.+++.+..++..+..+.....+.+. .....++..+++.++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (592)
T PRK10790 188 YSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGL 267 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233333333455677889999999999999999999999999888777666655443333222 222222222211111
Q ss_pred HHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCC
Q 000497 1142 ATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQ 1221 (1460)
Q Consensus 1142 ~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~ 1221 (1460)
.+. .+. ...+..+.|.+..++.|...+..++..+...+.++++...+.+|+.++++.++++.... ..++..
T Consensus 268 ~~~--~~~---~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~----~~~~~~ 338 (592)
T PRK10790 268 LML--FGF---SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGND----DRPLQS 338 (592)
T ss_pred HHH--HHH---HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCC----ccCCCC
Confidence 111 111 11344678888888889999999999999999999999999999999988765432111 123345
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
+.|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++++.+|++|
T Consensus 339 ~~i~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i 417 (592)
T PRK10790 339 GRIDIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGV 417 (592)
T ss_pred CeEEEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhhe
Confidence 789999999999753 5799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1302 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1302 ~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+||||||.+|+||||+||.+++..+|++++++++++|++++++.+ |+||.++|+|.+||||||||++||||++++|+|
T Consensus 418 ~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~i 497 (592)
T PRK10790 418 AMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQI 497 (592)
T ss_pred EEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCE
Confidence 999999999999999999998888999999999999999999999 999999999999999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhh
Q 000497 1380 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1458 (1460)
||||||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|+||++++ +.|++|++.+
T Consensus 498 lllDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~-~~y~~l~~~~ 575 (592)
T PRK10790 498 LILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQ-GRYWQMYQLQ 575 (592)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCC-CHHHHHHHHH
Confidence 99999999999999999999999988899999999999999999999999999999999999999875 6999999754
No 18
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=6.5e-73 Score=723.01 Aligned_cols=544 Identities=25% Similarity=0.356 Sum_probs=440.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000497 907 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 986 (1460)
Q Consensus 907 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 986 (1460)
++.++..++....+++++...+.............+...++++.++..++.+++.+.....+.+....++..+++++++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 111 (582)
T PRK11176 32 VALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGM 111 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33344444445555666655543221111111112222334455666677777777778888899999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 987 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1066 (1460)
Q Consensus 987 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~ 1066 (1460)
|.++|++.+.|++++|+++|++.+.+.+...+..++..++.+++.++++.+.+|+++++++..+++...+.....+..++
T Consensus 112 ~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~ 191 (582)
T PRK11176 112 PVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRN 191 (582)
T ss_pred CHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888888888888888877777777776555444444433333334443344
Q ss_pred HHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1067 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1146 (1460)
Q Consensus 1067 l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1146 (1460)
..+......+.+.+++.|.++|+.+||+|+.++.+.+++.+..+...+..........+.....+.+..+...++..+..
T Consensus 192 ~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~ 271 (582)
T PRK11176 192 ISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAAS 271 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455667889999999999999999999999999999999988888777666666666555554432222211111
Q ss_pred HhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEE
Q 000497 1147 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1226 (1460)
Q Consensus 1147 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f 1226 (1460)
+.. ..+..+.|.+..++++...+..++..+...+.++.....+.+|+.++.+.++|...+.. ...|..+.|+|
T Consensus 272 ~~~----~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~---~~~~~~~~i~~ 344 (582)
T PRK11176 272 FPS----VMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKR---VIERAKGDIEF 344 (582)
T ss_pred HHH----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc---CCCCCCCeEEE
Confidence 100 12456788888888898999999999999999999999999999999987655322111 12244578999
Q ss_pred EEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeC
Q 000497 1227 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1306 (1460)
Q Consensus 1227 ~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQ 1306 (1460)
+||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++||||
T Consensus 345 ~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 424 (582)
T PRK11176 345 RNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQ 424 (582)
T ss_pred EEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEcc
Confidence 99999997666789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCccHHHhcCcCC--CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000497 1307 SPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1382 (1460)
Q Consensus 1307 dp~lf~gTIR~NLdp~~--~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1382 (1460)
||++|+|||||||..+. .++|++++++++.++++++++++ |+||.+||+|.+|||||||||+||||++++|+||||
T Consensus 425 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ilil 504 (582)
T PRK11176 425 NVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILIL 504 (582)
T ss_pred CceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 99999999999998753 47899999999999999999999 999999999999999999999999999999999999
Q ss_pred eccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhh
Q 000497 1383 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1383 DEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1458 (1460)
|||||+||++|++.+.+.|++..+++|+|+||||++++..||+|++|++|+|+|.|+|++|++++ +.|++|++.+
T Consensus 505 DEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~-~~y~~l~~~~ 579 (582)
T PRK11176 505 DEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQN-GVYAQLHKMQ 579 (582)
T ss_pred ECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCC-ChHHHHHHHH
Confidence 99999999999999999999888899999999999999999999999999999999999999875 6999999753
No 19
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.1e-72 Score=730.37 Aligned_cols=530 Identities=24% Similarity=0.327 Sum_probs=424.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000497 907 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 986 (1460)
Q Consensus 907 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 986 (1460)
++.++..++....++.++...|.............+..+++++.++..++.+++.++....+.+...+++..+++++++.
T Consensus 154 ~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l 233 (694)
T TIGR03375 154 IASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGKKADLILSAKLFERVLGL 233 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33444455556666666665553211111111222333444455566778888888999999999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 987 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1066 (1460)
Q Consensus 987 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~ 1066 (1460)
|++| ++.++|++++|+ +|++.+.+.+...+...+..++.++..++++.+.+|+++++.+..++++..+..++.+..++
T Consensus 234 ~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 311 (694)
T TIGR03375 234 RMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVAIPLILLPGLLLQRPLSR 311 (694)
T ss_pred Cccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 788999999999 79999998887766666666655666666666677766554433333333333333333334
Q ss_pred HHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH
Q 000497 1067 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFI---ISFIAT 1143 (1460)
Q Consensus 1067 l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~---~~~~~~ 1143 (1460)
..+......+...+++.|+++|+.+||+|++|+.+.+++.+..++..+..+.....+.+.......+..+. +..++.
T Consensus 312 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~ 391 (694)
T TIGR03375 312 LAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQLVSVAIVVVGV 391 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455667788999999999999999999999999999888887777666555554444444433322 111111
Q ss_pred HHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCcc
Q 000497 1144 MAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGL 1223 (1460)
Q Consensus 1144 ~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~ 1223 (1460)
..+. .+..+.|.+..++.+...+..++..+...+.++.....+.+|+.++++.++|...... .....+..|.
T Consensus 392 ~~v~-------~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~-~~~~~~~~~~ 463 (694)
T TIGR03375 392 YLIS-------DGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGTR-FLHRPRLQGE 463 (694)
T ss_pred HHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-CCCCCCccce
Confidence 1121 2446788888888999999999999999999999999999999999988776422111 1111234678
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++++++|+++++
T Consensus 464 I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~ 543 (694)
T TIGR03375 464 IEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGY 543 (694)
T ss_pred EEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEE
Confidence 99999999997666689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCccCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000497 1304 VPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1380 (1460)
Q Consensus 1304 VpQdp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1380 (1460)
|||||++|+|||||||.++++ .+|++++++++.++++++++++ |+||.+||+|.+||||||||++||||++++|+|+
T Consensus 544 v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~il 623 (694)
T TIGR03375 544 VPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPIL 623 (694)
T ss_pred ECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999998865 7899999999999999999999 9999999999999999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1381 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1381 lLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
|||||||+||++|++.|++.|++..+++|+|+||||++++..||||+||++|+++|.|+|+||+++
T Consensus 624 iLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 624 LLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 999999999999999999999998899999999999999999999999999999999999999875
No 20
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.1e-72 Score=660.17 Aligned_cols=511 Identities=24% Similarity=0.350 Sum_probs=433.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHH
Q 000497 938 STSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFI 1017 (1460)
Q Consensus 938 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~ 1017 (1460)
+...+++.++++.++..++.+.+......++.++...+|..+++++.+.+..+-+..|+|.+....+..++.++..+...
T Consensus 38 ~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ry 117 (559)
T COG4988 38 SLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARY 117 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 34456667777778888888888888888999999999999999999999999999999999999999999999888877
Q ss_pred HHHHHHHHHhHHHhhhhHHHHHH---HHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHhhcchhHhHHHHhhcChHHH
Q 000497 1018 LNILLANFVGLLGIAVVLSYVQV---FFLLLLVPFWFIYSKLQF-FYR-STSRELRRLDSVSRSPIYASFTETLNGSSTI 1092 (1460)
Q Consensus 1018 l~~~~~~~~~~l~~~~~i~~~~~---~~~~~~ip~~~~~~~i~~-~y~-~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tI 1092 (1460)
+.....+.+..+.+++.+.+..| .++++..|++.++..+-. .-. ...++. .+...+-+||.+.++|+.|+
T Consensus 118 LPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~~a~~~s~~~~-----~~~~~ls~~FLD~LrGL~TL 192 (559)
T COG4988 118 LPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGLAAKDASEKQF-----SALARLSGHFLDRLRGLETL 192 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----HHHHHHHHHHHHHhcChHHH
Confidence 77777777666666666666555 445566677666554322 111 122222 23345678999999999999
Q ss_pred HhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHH
Q 000497 1093 RAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAP 1172 (1460)
Q Consensus 1093 raf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~ 1172 (1460)
|+|+..+...++..+.-++..+..+....++.--+..+|++..+-+.++++...+...+. +..+-...-+++..+-.
T Consensus 193 r~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~---G~ltl~~~l~~LiLAPE 269 (559)
T COG4988 193 RAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGE---GDLTLFAGLFVLILAPE 269 (559)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---CCccHHHHHHHHHHhHH
Confidence 999999999999999999999999999999988899999998877666665554432211 12333444455556677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCc
Q 000497 1173 IVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGT 1252 (1460)
Q Consensus 1173 ~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~Ge 1252 (1460)
+..++..+-..|.....+..+.+.+..+.+.|.+...........|..+.+++.+|++++|+++. ++++|+||+++|||
T Consensus 270 ff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~ 348 (559)
T COG4988 270 FFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQ 348 (559)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCceeeecceEEecCCCC-cccCCceeEecCCc
Confidence 88889999999998888899999999999887765332222233344455677779999997654 89999999999999
Q ss_pred EEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCCC-CChHHHH
Q 000497 1253 QVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIW 1331 (1460)
Q Consensus 1253 kvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~-~sd~ei~ 1331 (1460)
++||||+||||||||+++|+|+.+|++|+|.+||+|+.+++.+++|+++++|||+|++|+|||||||.+++. .+|++|+
T Consensus 349 ~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~ 428 (559)
T COG4988 349 LTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEII 428 (559)
T ss_pred EEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998876 6899999
Q ss_pred HHHHHhcHHHHHHh-CCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEE
Q 000497 1332 SVLEKCHVKEEVEA-VGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTV 1410 (1460)
Q Consensus 1332 ~aL~~~~l~~~i~~-lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~Tv 1410 (1460)
++++++++.++++. .|||+.+||+|.+|||||+||++||||++++++++++|||||+||.|||+.|++.|.+.++++||
T Consensus 429 ~al~~a~l~~~v~~p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktv 508 (559)
T COG4988 429 AALDQAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTV 508 (559)
T ss_pred HHHHHhcHHHhhcCCCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeE
Confidence 99999999999986 49999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhh
Q 000497 1411 ITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1411 I~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1458 (1460)
|+||||++.+.++|+|+|||+||++|.|+|++|.+++ +.|++|++++
T Consensus 509 l~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~-~~y~~l~~~q 555 (559)
T COG4988 509 LVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQ-GLYANLLKQQ 555 (559)
T ss_pred EEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcC-cHHHHHHHHH
Confidence 9999999999999999999999999999999999865 6999999864
No 21
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.4e-74 Score=722.11 Aligned_cols=512 Identities=23% Similarity=0.317 Sum_probs=415.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHH
Q 000497 938 STSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFI 1017 (1460)
Q Consensus 938 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~ 1017 (1460)
....+...|+.+++...+..++...++.+.+.|...++|.+.+++++|++++|||.+..|++..|++.|++.+.+.+...
T Consensus 69 ~~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geK 148 (1228)
T KOG0055|consen 69 EVSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEK 148 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHH
Confidence 44556777777888888888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHhhhhHHHHHHHHHHHH---HHHHHHHHHHH-HHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHH
Q 000497 1018 LNILLANFVGLLGIAVVLSYVQVFFLLLL---VPFWFIYSKLQ-FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIR 1093 (1460)
Q Consensus 1018 l~~~~~~~~~~l~~~~~i~~~~~~~~~~~---ip~~~~~~~i~-~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIr 1093 (1460)
+..++..+...++.+++-++..|.+.+++ +|++++...+. +...+.+. .+..+.+.--+...|++.+++|+.
T Consensus 149 vg~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~----ke~~~ya~Ag~iaEe~i~~iRTV~ 224 (1228)
T KOG0055|consen 149 VGNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTE----KEQEAYAKAGSIAEEVISSIRTVY 224 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhhhhhh
Confidence 99999988888888887777777765544 44444433322 22222222 222223334467889999999999
Q ss_pred hcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHH
Q 000497 1094 AFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPI 1173 (1460)
Q Consensus 1094 af~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~ 1173 (1460)
||+-|+...++|.+.++...|...... .|.++.....-.++....+....++.. .......++|.+...+..++.-
T Consensus 225 af~gq~~e~~ry~~~L~~~~k~gi~~g---~~~G~~~G~~~~~~~~~~a~~~WyG~~-li~~~~~~~g~v~~v~~~vl~g 300 (1228)
T KOG0055|consen 225 AFNGEKKEIERYSKALENALKFGIKKG---LFKGLGLGFTFFLLFASYALAFWYGST-LILNGGYNGGDVITVFFSVLIG 300 (1228)
T ss_pred hhcCcHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHHHHHHHHHHHH-HHhcCCCCCceEEEEEeehhhh
Confidence 999999999999999988887765432 233332222212111111111111111 0011233455555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEEEEEEEEecCCC-CccceeeEEEEeCCc
Q 000497 1174 VSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSL-PAALHDINFTIEGGT 1252 (1460)
Q Consensus 1174 ~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vL~~isl~I~~Ge 1252 (1460)
...++.....+..+.++.+|..++.+.++..++..............+|.|+|+||+|+|+... .++|+|+||+|++||
T Consensus 301 ~~sLgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~ 380 (1228)
T KOG0055|consen 301 GMSLGQASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQ 380 (1228)
T ss_pred hhhhhccccchHHHhccccchHHHHHHhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCC
Confidence 5667777777788888999999999988765543211111112223579999999999997542 379999999999999
Q ss_pred EEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCC-CCChHHHH
Q 000497 1253 QVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIW 1331 (1460)
Q Consensus 1253 kvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~-~~sd~ei~ 1331 (1460)
.||+||+|||||||++++|.|+|+|++|+|+|||.|+++++.++||++|++|.|+|+||++||+|||.++. +.+++|+.
T Consensus 381 ~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~ 460 (1228)
T KOG0055|consen 381 TVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIE 460 (1228)
T ss_pred EEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887 46899999
Q ss_pred HHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcE
Q 000497 1332 SVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMT 1409 (1460)
Q Consensus 1332 ~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~T 1409 (1460)
+|++.++.++++..+ |+||.+||+|..||||||||+||||||+|+|+||+||||||+||+++|+.+|++|++..+|+|
T Consensus 461 ~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grT 540 (1228)
T KOG0055|consen 461 EAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRT 540 (1228)
T ss_pred HHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCe
Confidence 999999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhh
Q 000497 1410 VITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1410 vI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1458 (1460)
.|+|||||+||+++|+|+||++|+|+|.|+|+||++++ |.|++|++.+
T Consensus 541 TivVaHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q 588 (1228)
T KOG0055|consen 541 TIVVAHRLSTIRNADKIAVMEEGKIVEQGTHDELIALG-GIYSSLVRLQ 588 (1228)
T ss_pred EEEEeeehhhhhccCEEEEEECCEEEEecCHHHHHhcc-chHHHHHHHH
Confidence 99999999999999999999999999999999999987 8999999864
No 22
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.2e-71 Score=706.08 Aligned_cols=504 Identities=22% Similarity=0.300 Sum_probs=411.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHH
Q 000497 946 LCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANF 1025 (1460)
Q Consensus 946 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~ 1025 (1460)
+.++.++..++.++..+.....+.+...+++.++++++++.|+.+|++.++|++++|+++|++.+++.+...+..++..+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~ 145 (574)
T PRK11160 66 VRGAAIGRTAGRYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAAL 145 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455566677777777888889999999999999999999999999999999999999999999998888888888888
Q ss_pred HhHHHhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHH
Q 000497 1026 VGLLGIAVVLSYVQVFFLLLLVPFW-FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAK 1104 (1460)
Q Consensus 1026 ~~~l~~~~~i~~~~~~~~~~~ip~~-~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~ 1104 (1460)
+.+++.++++++.+|.+.++++..+ +++..+..++.+..+...+....+.+.+.+.+.|.++|+++||+|+.|+++.++
T Consensus 146 ~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~ 225 (574)
T PRK11160 146 VVILVLTIGLSFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQ 225 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHH
Confidence 8888888888888877665442222 222222233334434444444556677888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000497 1105 FKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYA-APIVSLLGNFLSS 1183 (1460)
Q Consensus 1105 ~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~-~~~~~~l~~l~~~ 1183 (1460)
+.+..++..+..+.......+.....+++..+.+.++..+..... .+..+.|.+..++.|+ ......+..+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~-----~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~ 300 (574)
T PRK11160 226 LEQTEQQWLAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGGV-----GGNAQPGALIALFVFAALAAFEALMPVAGA 300 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888887776666655555555444433222222111111 1223455544444443 3334566667778
Q ss_pred HHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCCh
Q 000497 1184 FTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAG 1263 (1460)
Q Consensus 1184 ~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSG 1263 (1460)
+.++.+...+.+|+.++++.++|........ ..+..+.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||
T Consensus 301 ~~~~~~~~~s~~ri~~ll~~~~~~~~~~~~~--~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsG 378 (574)
T PRK11160 301 FQHLGQVIASARRINEITEQKPEVTFPTTST--AAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCG 378 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcccC--CCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCC
Confidence 8888999999999999998776532111111 12345789999999999765557999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHH
Q 000497 1264 KSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEE 1342 (1460)
Q Consensus 1264 KSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~ 1342 (1460)
||||+++|.|+++|++|+|.+||+|+++++.+++|+++++|||||++|+|||||||..+. +.+|+++++++++++++++
T Consensus 379 KSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~ 458 (574)
T PRK11160 379 KSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKL 458 (574)
T ss_pred HHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHH
Confidence 999999999999999999999999999999999999999999999999999999998765 4689999999999999999
Q ss_pred HHh-CCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHh
Q 000497 1343 VEA-VGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL 1421 (1460)
Q Consensus 1343 i~~-lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~ 1421 (1460)
+++ .||||.+||+|.+||||||||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.
T Consensus 459 i~~p~GldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~ 538 (574)
T PRK11160 459 LEDDKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLE 538 (574)
T ss_pred HcCccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHH
Confidence 985 4999999999999999999999999999999999999999999999999999999998888999999999999999
Q ss_pred hcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHh
Q 000497 1422 NMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1457 (1460)
Q Consensus 1422 ~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~ 1457 (1460)
.||+|++|++|+++|.|+|+||+++ +|.|++|++.
T Consensus 539 ~~d~i~~l~~G~i~~~g~~~~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 539 QFDRICVMDNGQIIEQGTHQELLAQ-QGRYYQLKQR 573 (574)
T ss_pred hCCEEEEEeCCeEEEeCCHHHHHhc-CcHHHHHHhh
Confidence 9999999999999999999999986 4699999874
No 23
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.5e-71 Score=709.77 Aligned_cols=544 Identities=25% Similarity=0.375 Sum_probs=456.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000497 907 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 986 (1460)
Q Consensus 907 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 986 (1460)
++.++..++..+.+++++...+.............+..+++++.++..++.+++.++....+.+....++..+++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~~~ 100 (571)
T TIGR02203 21 VAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLLGL 100 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44445555555566666655443211111112233344566677777888888888999999999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 987 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1066 (1460)
Q Consensus 987 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~ 1066 (1460)
|.++|++.+.|++++|+++|++.+++.+...+..++..++.+++.++++.+.+|+++++++...++...+...+.+..++
T Consensus 101 ~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~~~ 180 (571)
T TIGR02203 101 PVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRLRR 180 (571)
T ss_pred CHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888888888888888888888888777666666666666666665666
Q ss_pred HHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1067 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1146 (1460)
Q Consensus 1067 l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1146 (1460)
..+......+...+.+.|+++|+.+||+++.++++.+++.+..+...+..........+.....+++..+...++.++..
T Consensus 181 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 260 (571)
T TIGR02203 181 ISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFIAL 260 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666667788899999999999999999999999999999999998888777777766666555554432222211111
Q ss_pred HhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEE
Q 000497 1147 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1226 (1460)
Q Consensus 1147 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f 1226 (1460)
.. ...+..++|.+..++.++..+..++..+...+.++.....+.+|+.++.+.++|+..... +. -+..+.|++
T Consensus 261 ~~----~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~-~~--~~~~~~i~~ 333 (571)
T TIGR02203 261 FQ----AQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTR-AI--ERARGDVEF 333 (571)
T ss_pred HH----HHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-CC--CCCCCeEEE
Confidence 10 013456788888899999999999999999999999999999999999987665422111 11 124578999
Q ss_pred EEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeC
Q 000497 1227 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1306 (1460)
Q Consensus 1227 ~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQ 1306 (1460)
+||+|+|++..+++|+|+||+|+|||+++|+|+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++++||||
T Consensus 334 ~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 413 (571)
T TIGR02203 334 RNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQ 413 (571)
T ss_pred EEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEcc
Confidence 99999997655679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCccHHHhcCcCC--CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000497 1307 SPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1382 (1460)
Q Consensus 1307 dp~lf~gTIR~NLdp~~--~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1382 (1460)
||++|+|||||||..++ +.+|++++++++++++++++.++ ||||.++|+|.+||||||||+|||||++++|+|++|
T Consensus 414 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illL 493 (571)
T TIGR02203 414 DVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILIL 493 (571)
T ss_pred CcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999998875 57899999999999999999998 999999999999999999999999999999999999
Q ss_pred eccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhh
Q 000497 1383 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1383 DEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1458 (1460)
|||||+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|+++++++ +.|+++++++
T Consensus 494 DEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~-~~~~~~~~~~ 568 (571)
T TIGR02203 494 DEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARN-GLYAQLHNMQ 568 (571)
T ss_pred eCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcC-CHHHHHHHHh
Confidence 99999999999999999999988999999999999999999999999999999999999999865 6899988753
No 24
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.7e-71 Score=694.66 Aligned_cols=543 Identities=23% Similarity=0.279 Sum_probs=470.8
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 269 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 348 (1460)
Q Consensus 269 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (1460)
+-++..++-|++.+..+.+..++..+++++.|++.+.++|.+-.+.+......+++++.+..++.+++.....|...+++
T Consensus 143 ~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~ 222 (709)
T COG2274 143 SWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLG 222 (709)
T ss_pred HhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556667788888889999999999999999999999999987777777888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000497 349 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGL 426 (1460)
Q Consensus 349 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~ 426 (1460)
.|+...+...+|+|.+++|...++++++|++++.++ |.+.|.+++.. +..+...++-++....|.++. +.-+++++
T Consensus 223 ~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys-~~L~li~l 300 (709)
T COG2274 223 KRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYS-WKLTLIVL 300 (709)
T ss_pred HHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 999999999999999999999999999999999886 78888886543 333445555554444444443 44445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 427 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 506 (1460)
Q Consensus 427 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 506 (1460)
+.+++.+.+..++.+.+++..++.++...++.+.+.|.++||++||..+.|+.+..++++.-.+.++...+.........
T Consensus 301 ~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 380 (709)
T COG2274 301 AAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILN 380 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 56666667778888999999999999999999999999999999999999999999999988888888888777776665
Q ss_pred HHHHHHHHH--HHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhh
Q 000497 507 FFWATTPTL--FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 584 (1460)
Q Consensus 507 ~~~~~~~~~--~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~ 584 (1460)
.+......+ +.+++||++.+.++.+|.|+++++.++.+.+..|+..+...+..+.++.++.+|+.+.++.|...+...
T Consensus 381 ~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~ 460 (709)
T COG2274 381 TIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDK 460 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 555444433 456889999999999999999999999999999999999999999999999999999998765433111
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC
Q 000497 585 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 664 (1460)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~ 664 (1460)
... ......+.|+++|++|.|..+++ ++|+|+||+|++||.++|||+||||||||+|+|+|.++|
T Consensus 461 ~~~-----------~~~~~~g~I~~~nvsf~y~~~~~----~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p 525 (709)
T COG2274 461 TLI-----------HLPKLQGEIEFENVSFRYGPDDP----PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKP 525 (709)
T ss_pred ccc-----------cccccCceEEEEEEEEEeCCCCc----chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 000 11245678999999999986532 359999999999999999999999999999999999999
Q ss_pred CCeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCCCC-hHHHHHHHHHhcchHHHhhccCCCcccccC
Q 000497 665 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYD-PQSYSETLKACTLDVDISLMVGGDMAYIGE 730 (1460)
Q Consensus 665 ~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~-~~~~~~v~~~~~l~~di~~~~~gd~t~vg~ 730 (1460)
++|+|.++| .|+||+|++.+|+|||+|||.++.+.. .|+..++++..+.++++..+|.|++|.+||
T Consensus 526 ~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E 605 (709)
T COG2274 526 QQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGE 605 (709)
T ss_pred CCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccccccc
Confidence 999999997 599999999999999999999998754 478888888889999999999999999999
Q ss_pred CCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCC
Q 000497 731 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKG 810 (1460)
Q Consensus 731 ~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G 810 (1460)
+|.+||||||||++||||++++|+|+||||||||||+++++.|.+++ .. ...++|+|+||||++.+++||+|++|++|
T Consensus 606 ~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L-~~-~~~~~T~I~IaHRl~ti~~adrIiVl~~G 683 (709)
T COG2274 606 GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNL-LQ-ILQGRTVIIIAHRLSTIRSADRIIVLDQG 683 (709)
T ss_pred CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHH-HH-HhcCCeEEEEEccchHhhhccEEEEccCC
Confidence 99999999999999999999999999999999999999999999984 32 66789999999999999999999999999
Q ss_pred eEEEecCHHHHHhccccCcc
Q 000497 811 QVKWIGSSADLAVSLYSGFW 830 (1460)
Q Consensus 811 ~i~~~g~~~~l~~~~~~~~~ 830 (1460)
+|+++|+++|+++..+.+.+
T Consensus 684 kiv~~gs~~ell~~~g~y~~ 703 (709)
T COG2274 684 KIVEQGSHEELLAQGGLYAR 703 (709)
T ss_pred ceeccCCHHHHHHhcChHHH
Confidence 99999999999987665544
No 25
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-71 Score=643.10 Aligned_cols=499 Identities=22% Similarity=0.351 Sum_probs=414.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhH
Q 000497 949 FCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGL 1028 (1460)
Q Consensus 949 l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~ 1028 (1460)
+++...+..++.-+....+..++-.++|.++|+++...+..-..+-..|+++||+..|++.+|+..-..+...+..+...
T Consensus 67 ~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~ 146 (573)
T COG4987 67 LAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLI 146 (573)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHH
Confidence 34455555555555566677888899999999999999988889999999999999999999999999888888888888
Q ss_pred HHhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHH
Q 000497 1029 LGIAVVLSYVQVFFLLLLVPFW-FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKE 1107 (1460)
Q Consensus 1029 l~~~~~i~~~~~~~~~~~ip~~-~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~ 1107 (1460)
++..+.+++.+|++++.+...+ +....+...+.+..|...+--...+..++++|.|.+.|....+.||.++.|.+.+.+
T Consensus 147 ~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~ 226 (573)
T COG4987 147 AVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEA 226 (573)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHH
Confidence 8888888888877665443332 223333333444455555555667888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 000497 1108 HVVLYQRTSYSELTASLWLSLRLQLLAAFIIS-FIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFL-SSFT 1185 (1460)
Q Consensus 1108 ~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~-~~~~ 1185 (1460)
..+.+.+.......+..|....+.++.++++. ....++.....+. .+.-.+.+++..++.....+.-+. ..+.
T Consensus 227 ~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~-----~~~~~aa~~ll~~f~~~eaf~~L~~~A~~ 301 (573)
T COG4987 227 TEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGA-----LAQPGAALALLVIFAALEAFEPLAPGAFQ 301 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCC-----cchhHHHHHHHHHHHHHHHHhhhcchhHH
Confidence 99999999999999999999888888776654 3333333221111 111112222222233333333333 5567
Q ss_pred HHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHH
Q 000497 1186 ETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKS 1265 (1460)
Q Consensus 1186 ~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKS 1265 (1460)
++.+...|++|+.+..+.++|...+....+ -+.+ .++++||+|+|+.+.+++|+|+||++++||||||+||||||||
T Consensus 302 ~lgq~~~Sa~Rl~~i~~q~~e~~~~~~~~~--~~~~-~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKS 378 (573)
T COG4987 302 HLGQVIASARRLNDILDQKPEVTFPDEQTA--TTGQ-ALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKS 378 (573)
T ss_pred HhhHHHHHHHHHhhhccCCcccCCCccccC--Cccc-eeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHH
Confidence 888899999999999988776532211111 1122 8999999999998888999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHH
Q 000497 1266 SILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVE 1344 (1460)
Q Consensus 1266 TLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~ 1344 (1460)
|++++|.|-++|++|+|..+|.+++.++.+++|+.|++++|.+.+|+||+|+||...+ +.||||+|++|+++||.+.++
T Consensus 379 TllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~ 458 (573)
T COG4987 379 TLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLE 458 (573)
T ss_pred HHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999997665 469999999999999999999
Q ss_pred hC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh
Q 000497 1345 AV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN 1422 (1460)
Q Consensus 1345 ~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~ 1422 (1460)
+. ||+|.+||+|.+||||||||++|||+||++.++++|||||.+||++||+.|.+.|.+..+|+|+|+||||+..+..
T Consensus 459 ~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~ 538 (573)
T COG4987 459 SAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLER 538 (573)
T ss_pred hChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhh
Confidence 99 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHH
Q 000497 1423 MDEILILDHGHLVEQGNPQTLLQDECSVFSSFVR 1456 (1460)
Q Consensus 1423 ~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~ 1456 (1460)
||||+|||+|+++|+|+|.+|+++ +|.|++|++
T Consensus 539 ~drIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q 571 (573)
T COG4987 539 MDRIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQ 571 (573)
T ss_pred cCEEEEEECCeeeecCCHHhhhcc-ccHHHHHhc
Confidence 999999999999999999999995 579999986
No 26
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.8e-71 Score=666.22 Aligned_cols=540 Identities=20% Similarity=0.217 Sum_probs=443.2
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 273 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-GSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 351 (1460)
Q Consensus 273 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1460)
.+.+..||.+..+.++.++.......-|.++.+++|.+.. .+......-....+..++++.+++...+.+.....+.++
T Consensus 140 ~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~rv 219 (716)
T KOG0058|consen 140 GLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAGERV 219 (716)
T ss_pred HHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556678888888888999999999999999999998876 333222233455666778888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHH
Q 000497 352 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVA-LYLLYTQVKFAFVSGLAIT 429 (1460)
Q Consensus 352 r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~pl~i~i~-~~lL~~~lg~a~l~g~~v~ 429 (1460)
-..+...+|++.++...+++++..+|++++.++.|++.+.+.+ .++.+..-+.++...+ .+|++..+.++.+.-+ .+
T Consensus 220 ~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i-~~ 298 (716)
T KOG0058|consen 220 VARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVTLI-VV 298 (716)
T ss_pred HHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHH-Hh
Confidence 9999999999999999999999999999999999999998754 4566666566665443 3445545555544332 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 430 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 509 (1460)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 509 (1460)
.+.+.+..+++++.++..++.+++..+-.+...|.|++||+||+|+.|+...++..+.-++-++..+|......+....+
T Consensus 299 P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~ 378 (716)
T KOG0058|consen 299 PIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGST 378 (716)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHH
Confidence 33344567777888888888888888888999999999999999999987777766554433444444443333332222
Q ss_pred HH--HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhc
Q 000497 510 AT--TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 587 (1460)
Q Consensus 510 ~~--~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~ 587 (1460)
.. ....++++.+|.|++.++.||++.+.+++.+-..+..++..+...++.++++..+-+|+.+|++.++.-+.. . .
T Consensus 379 ~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~-G-~ 456 (716)
T KOG0058|consen 379 NLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLT-G-T 456 (716)
T ss_pred HHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCC-C-c
Confidence 22 224567788999999999999999999999999999999999999999999999999999999765432211 0 0
Q ss_pred CCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCe
Q 000497 588 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 667 (1460)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G 667 (1460)
..| ....+.|+|+|++|+||.+++. ++|+|+||+|+|||.+|+||||||||||+.++|+.+|+|++|
T Consensus 457 ~~p----------~~~~G~IeF~~VsFaYP~Rp~~---~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG 523 (716)
T KOG0058|consen 457 LAP----------DHLQGVIEFEDVSFAYPTRPDV---PVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSG 523 (716)
T ss_pred ccc----------ccccceEEEEEeeeecCCCCCc---hhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 011 1345789999999999987554 459999999999999999999999999999999999999999
Q ss_pred EEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000497 668 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 733 (1460)
Q Consensus 668 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~ 733 (1460)
+|.+|| +||+|.|+|.||++||+|||.+|.+ .++|+..++.+.+..++.|..+|+|++|.|||+|.
T Consensus 524 ~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~ 603 (716)
T KOG0058|consen 524 RILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGS 603 (716)
T ss_pred eEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccc
Confidence 999998 6999999999999999999999975 57788999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000497 734 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 813 (1460)
Q Consensus 734 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 813 (1460)
.|||||||||||||||++||.||||||+|||||++.+. +.+.++.. ..+++|||+|+||++.+++||+|+++++|+++
T Consensus 604 qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~-lVq~aL~~-~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~ 681 (716)
T KOG0058|consen 604 QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEY-LVQEALDR-LMQGRTVLVIAHRLSTVRHADQIVVIDKGRVV 681 (716)
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHH-HHHHHHHH-hhcCCeEEEEehhhhHhhhccEEEEEcCCeEE
Confidence 99999999999999999999999999999999999765 44554544 67789999999999999999999999999999
Q ss_pred EecCHHHHHhcc-ccCcc
Q 000497 814 WIGSSADLAVSL-YSGFW 830 (1460)
Q Consensus 814 ~~g~~~~l~~~~-~~~~~ 830 (1460)
+.|+|+|+++.. +.+.+
T Consensus 682 E~G~h~eLl~~~~gly~~ 699 (716)
T KOG0058|consen 682 EMGTHDELLSKPNGLYAK 699 (716)
T ss_pred ecccHHHHhhCcccHHHH
Confidence 999999999876 34433
No 27
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.4e-71 Score=716.45 Aligned_cols=541 Identities=23% Similarity=0.331 Sum_probs=433.3
Q ss_pred HHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Q 000497 910 ILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVL 989 (1460)
Q Consensus 910 ~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ 989 (1460)
++........++.++...|..-..........+..+++++.++..++.+++.++....+.+...+++.++++++++.|+.
T Consensus 149 ~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~ 228 (694)
T TIGR01846 149 LALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTSRIDVELGARLYRHLLGLPLG 228 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 34444445556666655553211111112223344555566667788888889999999999999999999999999999
Q ss_pred cccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 990 FFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRR 1069 (1460)
Q Consensus 990 ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~l~r 1069 (1460)
||++.++|++++|+ +|++.+.+.+...+...+..++.++..++++.+.+|.++++++..++++..+.....+..+...+
T Consensus 229 ~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~ 307 (694)
T TIGR01846 229 YFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGPILRKRVE 307 (694)
T ss_pred HcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 69999988777666666555555555566667777766554443333333322222222222222
Q ss_pred HHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000497 1070 LDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGS 1149 (1460)
Q Consensus 1070 l~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~ 1149 (1460)
...+..+...+++.|+++|+.+||+||.|+.+.+++.+..++..+..+.....+.+.....+++..+...++.++.....
T Consensus 308 ~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv 387 (694)
T TIGR01846 308 DKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLWFGAHLV 387 (694)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 23344556778999999999999999999999999999999888887777666666665555544332222111111100
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEEEEE
Q 000497 1150 RGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNV 1229 (1460)
Q Consensus 1150 ~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nv 1229 (1460)
..+..+.|.+..+..++..+..++..+...+.++++...+.+|+.++++.++|+..... ....+..|.|+|+||
T Consensus 388 ----~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~--~~~~~~~~~i~~~~v 461 (694)
T TIGR01846 388 ----IGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSAGL--AALPELRGAITFENI 461 (694)
T ss_pred ----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCC--CCCCCCCCeEEEEEE
Confidence 12446788888888889999999999999999999999999999999988776432111 111123578999999
Q ss_pred EEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCc
Q 000497 1230 TMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPF 1309 (1460)
Q Consensus 1230 s~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~ 1309 (1460)
+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|++||+|+++++.+++|+++++|||||.
T Consensus 462 sf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~ 541 (694)
T TIGR01846 462 RFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENV 541 (694)
T ss_pred EEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCe
Confidence 99998766779999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccc
Q 000497 1310 LFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1386 (1460)
Q Consensus 1310 lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaT 1386 (1460)
+|+|||||||..++ ..+|++++++++.++++++++++ |+||.++++|.+||||||||++||||++++|+||||||||
T Consensus 542 lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEpt 621 (694)
T TIGR01846 542 LFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEAT 621 (694)
T ss_pred ehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCC
Confidence 99999999998765 47899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhh
Q 000497 1387 ANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1387 S~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1458 (1460)
|+||++|++.+.+.|++..+++|+|+||||++++..||+|++|++|+|+|.|+|++|++++ |.|++|++..
T Consensus 622 s~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~~-~~y~~l~~~~ 692 (694)
T TIGR01846 622 SALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLALQ-GLYARLWQQQ 692 (694)
T ss_pred cCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHcC-ChHHHHHHhh
Confidence 9999999999999999988899999999999999999999999999999999999999865 7999999753
No 28
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-73 Score=637.12 Aligned_cols=493 Identities=24% Similarity=0.407 Sum_probs=396.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhh-
Q 000497 954 SFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIA- 1032 (1460)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~- 1032 (1460)
+++..+++|+......-+.+.+...+++++...++.|.-...+|+.+.-+.+..+.+. .+......+.-.+.-+...+
T Consensus 273 G~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~v 351 (790)
T KOG0056|consen 273 GFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMV 351 (790)
T ss_pred cchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhh
Confidence 4666678888888888899999999999999999999999999988776655544443 12111111111122221111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHH
Q 000497 1033 VVLSYVQVFFLLLLVPFWFIYSKLQ----FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEH 1108 (1460)
Q Consensus 1033 ~~i~~~~~~~~~~~ip~~~~~~~i~----~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~ 1108 (1460)
-......+|+.+++...+..|..+. .+-.+..|.+...+.+++ +.-.+++-+.+|+|-|+.|++..+++.+.
T Consensus 352 YF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesr----Ar~vDsllNFETVKyy~Ae~yEverYreA 427 (790)
T KOG0056|consen 352 YFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESR----ARQVDSLLNFETVKYYNAEDYEVERYREA 427 (790)
T ss_pred hhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhh----hhhhhhhhcchhhhccCchhhhHHHHHHH
Confidence 2223346777776666665554332 222233333333334443 34578899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1109 VVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETE 1188 (1460)
Q Consensus 1109 ~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e 1188 (1460)
++.+|+..++....-..+...-..+..+......++++. .......+.|...+..+|.+++..+++++-..+..++
T Consensus 428 il~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY----~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ 503 (790)
T KOG0056|consen 428 ILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAY----RVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQ 503 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeee----eeeeccccccceehHHHHHHHHhCchHHHHHHHHHHH
Confidence 999999887765554444443333322222111122111 1112345678888999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHH
Q 000497 1189 KEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSIL 1268 (1460)
Q Consensus 1189 ~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl 1268 (1460)
++.+-.|++.++++.++|-.+.+..+|- --.+|.|+|+||+|.|.|+ +|||+||||+++||+.||+|||||+||||++
T Consensus 504 ~nfiDmEnmfdllkee~eVvd~P~a~pl-~~~~G~i~fsnvtF~Y~p~-k~vl~disF~v~pGktvAlVG~SGaGKSTim 581 (790)
T KOG0056|consen 504 KNFIDMENMFDLLKEEPEVVDLPGAPPL-KVTQGKIEFSNVTFAYDPG-KPVLSDISFTVQPGKTVALVGPSGAGKSTIM 581 (790)
T ss_pred HhhhhHHHHHHHhhcCchhhcCCCCCCc-cccCCeEEEEEeEEecCCC-CceeecceEEecCCcEEEEECCCCCchhHHH
Confidence 9999999999999877765332222222 2358999999999999876 5799999999999999999999999999999
Q ss_pred HHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC-
Q 000497 1269 NALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV- 1346 (1460)
Q Consensus 1269 ~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~l- 1346 (1460)
.+|+|++|.++|+|.|||+||+++..++||++||+||||.+||++||..||.+... .+|||+.+|.+.++++|.|-++
T Consensus 582 RlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fP 661 (790)
T KOG0056|consen 582 RLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFP 661 (790)
T ss_pred HHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999988764 6899999999999999999988
Q ss_pred -CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCE
Q 000497 1347 -GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDE 1425 (1460)
Q Consensus 1347 -gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~Dr 1425 (1460)
|++|.|||+|-.||||||||+++||++||+|.|++||||||+||..||+.||.++.+..+++|.|+|||||+||.++|.
T Consensus 662 egY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ 741 (790)
T KOG0056|consen 662 EGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADL 741 (790)
T ss_pred hhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCeEEEEcChhHHhccCCcHHHHHHHh
Q 000497 1426 ILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1457 (1460)
Q Consensus 1426 IlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~ 1457 (1460)
|+|+++|+|+|.|+|+||+++++|.|++||+.
T Consensus 742 ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~ 773 (790)
T KOG0056|consen 742 ILVISNGRIVERGRHEELLKRDGGAYADMWQA 773 (790)
T ss_pred EEEEeCCeEeecCcHHHHHhccCCcHHHHHHH
Confidence 99999999999999999999999999999953
No 29
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=9.2e-70 Score=694.37 Aligned_cols=535 Identities=19% Similarity=0.189 Sum_probs=420.4
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 270 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-GSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 348 (1460)
Q Consensus 270 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (1460)
.++...+.+++.++...++.++..++..++|++++.++|.+.. +.+....+.++++++++.++..++.....+...+.+
T Consensus 12 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (588)
T PRK11174 12 WLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAG 91 (588)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667788888889999999999999999999999997642 222222334455566667778888888888889999
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHH---HHHHhHHHHHH
Q 000497 349 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYL---LYTQVKFAFVS 424 (1460)
Q Consensus 349 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~l---L~~~lg~a~l~ 424 (1460)
.++...+...+|+|.++++...+.+.++|+++|.+++|++++.+... .+..++...+.+++++++ +.+.+++.+++
T Consensus 92 ~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~ 171 (588)
T PRK11174 92 QHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLG 171 (588)
T ss_pred HHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998653 455555554444433332 23333333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHH----HHHHHHHHHHHHHH
Q 000497 425 GLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMK----TRSSEVKHLSTRKY 500 (1460)
Q Consensus 425 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~----~R~~El~~~~~~~~ 500 (1460)
++++...+..++.++.++..++.++..++..+.+.|.++|+++||.|++|+.+.+++.+ .|+.+.+..+....
T Consensus 172 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (588)
T PRK11174 172 ---TAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFL 248 (588)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333334556778888888999999999999999999999999999999988877744 44444443333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHh---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 501 LDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAA---------MVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLT 571 (1460)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~---------~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~ 571 (1460)
.......+.... . +.++.++.+.+. +.++.| .+|+++.+...+..|+..++..+..+.++.++.+||.
T Consensus 249 ~~~~~~~~~~~~-~-~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~ 325 (588)
T PRK11174 249 SSAVLEFFASIS-I-ALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLV 325 (588)
T ss_pred HHHHHHHHHHHH-H-HHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332222222111 1 122233333333 334443 4566667778889999999999999999999999999
Q ss_pred HhhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcH
Q 000497 572 RFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGK 651 (1460)
Q Consensus 572 ~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGK 651 (1460)
++++.++.++.... ...+ ......|+++|++|.|+++ +++|+|+||+++||+.++|||||||||
T Consensus 326 ~~l~~~~~~~~~~~-~~~~----------~~~~~~i~~~~vsf~~~~~-----~~vL~~i~l~i~~G~~vaIvG~SGsGK 389 (588)
T PRK11174 326 TFLETPLAHPQQGE-KELA----------SNDPVTIEAEDLEILSPDG-----KTLAGPLNFTLPAGQRIALVGPSGAGK 389 (588)
T ss_pred HHHcCCCcccCCCc-cccC----------CCCCceEEEEeeEEeccCC-----CeeeeeeEEEEcCCCEEEEECCCCCCH
Confidence 99976543211000 0000 0123469999999987642 235999999999999999999999999
Q ss_pred HHHHHHHhcCccCCCeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHH
Q 000497 652 SSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDI 717 (1460)
Q Consensus 652 Stll~~l~g~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di 717 (1460)
|||+++|+|++ |++|+|.++| +|+||||+||||++||||||++|++ .+++++.++++.|++++++
T Consensus 390 STL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i 468 (588)
T PRK11174 390 TSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFL 468 (588)
T ss_pred HHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHH
Confidence 99999999999 8999999987 6999999999999999999999964 8999999999999999999
Q ss_pred hhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcch
Q 000497 718 SLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA 797 (1460)
Q Consensus 718 ~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~ 797 (1460)
+.+|+|++|.|||+|.+|||||||||+||||++++|+||||||||||||++++++|.+. +.. ..+++|+|+||||++.
T Consensus 469 ~~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~-l~~-~~~~~TvIiItHrl~~ 546 (588)
T PRK11174 469 PLLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQA-LNA-ASRRQTTLMVTHQLED 546 (588)
T ss_pred HhcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHH-HhCCCEEEEEecChHH
Confidence 99999999999999999999999999999999999999999999999999999999986 444 5578999999999999
Q ss_pred hhcCCEEEEEeCCeEEEecCHHHHHhccccCc
Q 000497 798 ISAADMVVVMDKGQVKWIGSSADLAVSLYSGF 829 (1460)
Q Consensus 798 l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~ 829 (1460)
++.||+|++|++|+++++|+|+|++++.+.+.
T Consensus 547 i~~aD~Iivl~~G~i~e~G~~~eL~~~~~~y~ 578 (588)
T PRK11174 547 LAQWDQIWVMQDGQIVQQGDYAELSQAGGLFA 578 (588)
T ss_pred HHhCCEEEEEeCCeEeecCCHHHHHhcchHHH
Confidence 99999999999999999999999987655443
No 30
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.5e-69 Score=691.43 Aligned_cols=545 Identities=23% Similarity=0.307 Sum_probs=427.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000497 905 ICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIV 984 (1460)
Q Consensus 905 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl 984 (1460)
+++..++..++....++++....+.... ......++.+++++.++..+..+...........+....+..+++++++
T Consensus 24 ~~~~~i~~~~~~~~~~~~~~~iid~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ 100 (588)
T PRK13657 24 LAVANVLLAAATFAEPILFGRIIDAISG---KGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFERII 100 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555555666666777666553221 1112222233333333333333333334444455555566679999999
Q ss_pred cCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 985 NAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTS 1064 (1460)
Q Consensus 985 ~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~s 1064 (1460)
+.|..+|++.+.|++++|+++|++.+.+.....+..++..++..++.++++.+.+|+++++++.+.+++..+...+.+..
T Consensus 101 ~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~ 180 (588)
T PRK13657 101 QLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMRKT 180 (588)
T ss_pred hCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998876666666666666666666666667777776665555555555566666666
Q ss_pred HHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1065 RELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATM 1144 (1460)
Q Consensus 1065 r~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 1144 (1460)
++..+......+.+.+++.|+++|+.+||+|+.++.+.+++.+..+...+..........+.....+++..+...++.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (588)
T PRK13657 181 KDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAILVL 260 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666677888899999999999999999999999999998888877766555555554444433332222211111
Q ss_pred HHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccE
Q 000497 1145 AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLI 1224 (1460)
Q Consensus 1145 ~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I 1224 (1460)
..... ..+..+.|.+..++.++..+..++..+...+.++..+..+.+|+.++.+.+++........+. -+..+.|
T Consensus 261 g~~~v----~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~-~~~~~~I 335 (588)
T PRK13657 261 GAALV----QKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGAIDL-GRVKGAV 335 (588)
T ss_pred HHHHH----HcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCc-CCCCCeE
Confidence 11110 124567888888888889999999999999999999999999999998765442111111111 1235689
Q ss_pred EEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000497 1225 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1304 (1460)
Q Consensus 1225 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iV 1304 (1460)
+++||+|+|+++ +++|+|+||+++|||++||+|+||||||||+++|+|+++|++|+|.+||.|+++++.+++|++++||
T Consensus 336 ~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v 414 (588)
T PRK13657 336 EFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVV 414 (588)
T ss_pred EEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEE
Confidence 999999999743 5699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCccCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000497 1305 PQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1381 (1460)
Q Consensus 1305 pQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1381 (1460)
||||.+|+|||||||..++ ..+|+++++++++++++++++++ |+||.++++|.+||||||||++||||++++|+|+|
T Consensus 415 ~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~ili 494 (588)
T PRK13657 415 FQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILI 494 (588)
T ss_pred ecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998774 46899999999999999999998 99999999999999999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhhC
Q 000497 1382 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1459 (1460)
Q Consensus 1382 LDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1459 (1460)
||||||+||++|++.|.+.|++..+++|+|+||||+++++.||+|++|++|+++|.|+|++|+++ ++.|++|+++.+
T Consensus 495 LDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~ 571 (588)
T PRK13657 495 LDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRFAALLRAQG 571 (588)
T ss_pred EeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChHHHHHHHhh
Confidence 99999999999999999999988789999999999999999999999999999999999999986 479999988653
No 31
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=8.4e-70 Score=693.99 Aligned_cols=547 Identities=24% Similarity=0.366 Sum_probs=432.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000497 907 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 986 (1460)
Q Consensus 907 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 986 (1460)
++.++...+....++.+....+..-..........++.+++++.++..++.+++.++....+.+....++..+++++++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~ 104 (576)
T TIGR02204 25 VALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGERVVADIRRAVFAHLISL 104 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33444555555555555554442111111111222334444445555666777778888889999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 987 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1066 (1460)
Q Consensus 987 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~ 1066 (1460)
|.++|++...|++++|+++|++.+++.....+..++..++.+++.++++++..|++.++++...++...+...+.+..+.
T Consensus 105 ~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~ 184 (576)
T TIGR02204 105 SPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGRRVRK 184 (576)
T ss_pred CHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888777777777777777777777777765544433333333333333333344
Q ss_pred HHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1067 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1146 (1460)
Q Consensus 1067 l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1146 (1460)
..+.....+....+++.|.++|+++||+|+.++++.+++.+..+...+..........|+......+..+...++..+..
T Consensus 185 ~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 264 (576)
T TIGR02204 185 LSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVFGAIVGVLWVGA 264 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444556667789999999999999999999999999999888877776655555555554443333221111111111
Q ss_pred HhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEE
Q 000497 1147 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1226 (1460)
Q Consensus 1147 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f 1226 (1460)
.. ...+..+.|.+..+..++..+..++..+...+.++.....+.+|+.++.+.++|........+..+|..+.|+|
T Consensus 265 ~~----v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 340 (576)
T TIGR02204 265 HD----VIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHPKTLPVPLRGEIEF 340 (576)
T ss_pred HH----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCCccCCcCCCceEEE
Confidence 00 01234578888888889999999999999999999999999999999988765421111111122345578999
Q ss_pred EEEEEEecCCC-CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEe
Q 000497 1227 QNVTMRYKPSL-PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP 1305 (1460)
Q Consensus 1227 ~nvs~~Y~~~~-~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVp 1305 (1460)
+||+|+|+++. +++|+|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++|+|
T Consensus 341 ~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~ 420 (576)
T TIGR02204 341 EQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVP 420 (576)
T ss_pred EEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEc
Confidence 99999997543 57999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000497 1306 QSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1382 (1460)
Q Consensus 1306 Qdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1382 (1460)
|||++|+|||||||.+++ ..+|++++++++++++.++++.+ |+||.++|+|.+||||||||++||||++++|+||||
T Consensus 421 Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ilil 500 (576)
T TIGR02204 421 QDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLL 500 (576)
T ss_pred cCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEE
Confidence 999999999999999865 46789999999999999999998 999999999999999999999999999999999999
Q ss_pred eccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhh
Q 000497 1383 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1383 DEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1458 (1460)
|||||+||.+|++.+.+.+++..+++|+|+||||++.+..||||++|++|+++|.|+|++|+++ ++.|++|++.+
T Consensus 501 DEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~-~~~~~~l~~~~ 575 (576)
T TIGR02204 501 DEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAK-GGLYARLARLQ 575 (576)
T ss_pred eCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHc-CChHHHHHhhc
Confidence 9999999999999999999998889999999999999999999999999999999999999885 57999998753
No 32
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=8.4e-70 Score=686.13 Aligned_cols=463 Identities=21% Similarity=0.266 Sum_probs=379.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhH
Q 000497 949 FCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGL 1028 (1460)
Q Consensus 949 l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~ 1028 (1460)
+.++..++.++..+.....+.+...+++.++++++++.|.+||++.++|++++|+++|++.+++.+...+..++..++.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~ 141 (529)
T TIGR02868 62 FGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVG 141 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566667777777888899999999999999999999999999999999999999999998888888888877777
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHH
Q 000497 1029 LGIAVVLSYVQVFFLLLLVPFWFIY-SKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKE 1107 (1460)
Q Consensus 1029 l~~~~~i~~~~~~~~~~~ip~~~~~-~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~ 1107 (1460)
++.++++++.+|.+.++++..+.++ .....++.+..+...+......+.+.+++.|+++|+++||+|++|+.+.+++.+
T Consensus 142 ~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~ 221 (529)
T TIGR02868 142 SAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEA 221 (529)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHH
Confidence 7777777788887766554433332 222233444434444444456678889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1108 HVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTET 1187 (1460)
Q Consensus 1108 ~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~ 1187 (1460)
..++..+..........+......++..+...++..+.... ...+..+.|.+...+.++..+..++..+...+.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~ 297 (529)
T TIGR02868 222 ADRELLAAERRAARATGLGAAAQLLAAGLAVLGALWAGGPA----VADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQAL 297 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877766555444443333333322221111111100 01234567888888888888999999999999999
Q ss_pred HHHHHHHHHHHHhhcCcccccccCC-CCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHH
Q 000497 1188 EKEMVSLERVLEYMDVPQEELCGYQ-SLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSS 1266 (1460)
Q Consensus 1188 e~~~~sveRi~~~~~~~~E~~~~~~-~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKST 1266 (1460)
.+...+.+|+.++++.++|...... .+...+|..+.|+|+||+|+|+++ +++|+|+||+|+|||++||||||||||||
T Consensus 298 ~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~-~~vL~~isl~i~~G~~vaIvG~SGsGKST 376 (529)
T TIGR02868 298 TRVRAAAERIEEVTGAKGPRPEGVVPAAGALGLGKPTLELRDLSFGYPGS-PPVLDGVSLDLPPGERVAILGPSGSGKST 376 (529)
T ss_pred HHHHHHHHHHHHHhcCCCCcCCCCCCCCcccCCCCceEEEEEEEEecCCC-CceeecceEEEcCCCEEEEECCCCCCHHH
Confidence 9999999999999987765322111 111234456789999999999754 46999999999999999999999999999
Q ss_pred HHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHh
Q 000497 1267 ILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEA 1345 (1460)
Q Consensus 1267 Ll~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~ 1345 (1460)
|+++|+|+++|++|+|.+||+|++++ .+++|++++||||||++|+|||||||.+++ +.+|+++++|++.+++++++++
T Consensus 377 Ll~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~ 455 (529)
T TIGR02868 377 LLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRS 455 (529)
T ss_pred HHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHh
Confidence 99999999999999999999999999 999999999999999999999999999875 4689999999999999999999
Q ss_pred C--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccCh
Q 000497 1346 V--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRI 1417 (1460)
Q Consensus 1346 l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl 1417 (1460)
+ |+||.+||+|.+||||||||+|||||++++|+|||||||||+||++||+.|++.+++..+++|+|+||||+
T Consensus 456 lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 456 LPDGLDTVLGEGGARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred CcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 8 99999999999999999999999999999999999999999999999999999999888999999999996
No 33
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.1e-69 Score=624.67 Aligned_cols=505 Identities=23% Similarity=0.362 Sum_probs=390.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHH
Q 000497 940 SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILN 1019 (1460)
Q Consensus 940 ~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~ 1019 (1460)
..-+..|++..++..++.-++.+.+++...++-+....+.+++.+...+++|.+..+|.+.+.+..-...|...+...+.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~ 153 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVF 153 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHH
Confidence 34567888999999999999999999999999999999999999999999999999998877776666555555544444
Q ss_pred HHHHHHHhHHHhhhhHHH-HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHh
Q 000497 1020 ILLANFVGLLGIAVVLSY-VQVFFLLLLVPFWFIYSK----LQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRA 1094 (1460)
Q Consensus 1020 ~~~~~~~~~l~~~~~i~~-~~~~~~~~~ip~~~~~~~----i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIra 1094 (1460)
.++..++.+......+.+ ..+.++++.+.....|.. +.++--+-.+++...+. ..-....|++.+-.+||+
T Consensus 154 ~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn----~as~~~~dsL~Nye~VKs 229 (591)
T KOG0057|consen 154 NIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADN----SASRRAYDSLINYEIVKS 229 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhh----HHHHHHHHHHhhHHHHHH
Confidence 444333333222222222 233333333333333321 11111111222222222 223456799999999999
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHH
Q 000497 1095 FKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIV 1174 (1460)
Q Consensus 1095 f~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~ 1174 (1460)
|+.|++..+++...+.++.+......+....+.+.-..+.. +..+.+.+.+..+ ...+..+.|.....-+...++.
T Consensus 230 fNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFs---v~~~~im~l~~~g-i~~~~mtvgdlv~~n~l~~qL~ 305 (591)
T KOG0057|consen 230 FNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFS---VALTFIMVLGSNG-IAAGKMTVGDLVMVNSLLFQLS 305 (591)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHH---HHHHHHHHHHhhh-hhhccccccchhhHHHHHHHHH
Confidence 99999999999999998888765544333333222222222 1112222222222 1233455666777777788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEE
Q 000497 1175 SLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQV 1254 (1460)
Q Consensus 1175 ~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~Gekv 1254 (1460)
.+++.+-..+.++.+++.-.+-.+...+... ..... +.+.-+..|.|+|+||+|.|.|+ +++|+|+||+|++||||
T Consensus 306 ~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~--~i~~~-~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekV 381 (591)
T KOG0057|consen 306 LPLNFLGSVYRELRQALTDMRTLFILLEVDE--DIQEA-ALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKV 381 (591)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHhhhhhhh--hhhhc-cCCcccCCCcEEEEeeEEEeCCC-CceecceeEEecCCCEE
Confidence 8888888888888877777666654432111 11111 22223446789999999999865 56999999999999999
Q ss_pred EEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCCC-CChHHHHHH
Q 000497 1255 GIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSV 1333 (1460)
Q Consensus 1255 gIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~-~sd~ei~~a 1333 (1460)
||||+|||||||++++|+||++ ++|+|+|||+||++++++.+|+.||+||||..||++||-+||.+++. .+|||+.++
T Consensus 382 aIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~ 460 (591)
T KOG0057|consen 382 AIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEA 460 (591)
T ss_pred EEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHH
Confidence 9999999999999999999999 99999999999999999999999999999999999999999998875 589999999
Q ss_pred HHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEE
Q 000497 1334 LEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVI 1411 (1460)
Q Consensus 1334 L~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI 1411 (1460)
+++++++|.+.++ |++|.+||+|..||||||||++||||+||+|+|+++|||||+||.+||+.|.+.|++...++|+|
T Consensus 461 ~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI 540 (591)
T KOG0057|consen 461 CKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVI 540 (591)
T ss_pred HHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEE
Confidence 9999999999999 99999999999999999999999999999999999999999999999999999999988999999
Q ss_pred EeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhh
Q 000497 1412 TIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1412 ~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1458 (1460)
+|+||++++++||+|++||+|+|+|.|+|+||++ +++.|+.+|...
T Consensus 541 ~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~ 586 (591)
T KOG0057|consen 541 MIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQ 586 (591)
T ss_pred EEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccc
Confidence 9999999999999999999999999999999999 778898888653
No 34
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.2e-69 Score=681.31 Aligned_cols=506 Identities=22% Similarity=0.284 Sum_probs=407.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHH
Q 000497 941 FYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNI 1020 (1460)
Q Consensus 941 ~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~ 1020 (1460)
.|+++++++.++..++.++..+.....+.+...+++..+++++++.|+++|++.++|++++|+++|++.+.......+..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~ 116 (569)
T PRK10789 37 MWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLT 116 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34455555555666666676677777889999999999999999999999999999999999999999998666555555
Q ss_pred HHHHHHhHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHH
Q 000497 1021 LLANFVGLLGIAVVL-SYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSED 1099 (1460)
Q Consensus 1021 ~~~~~~~~l~~~~~i-~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~ 1099 (1460)
++..++..++.++++ .+.+|.+.++++..+.+...+.+.+.+..++..+......+.+.+.+.|+++|+++||+|++|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~ 196 (569)
T PRK10789 117 LVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLED 196 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccH
Confidence 555544444443333 3455655444333333333333334333333333344456778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHH
Q 000497 1100 YFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIIS---FIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSL 1176 (1460)
Q Consensus 1100 ~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~ 1176 (1460)
.+.+++.+..++..+..+.......+..........+... .++...+. .+..+.|.+..+..|...+..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~-------~g~lt~g~l~a~~~~~~~~~~p 269 (569)
T PRK10789 197 RQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVV-------NGSLTLGQLTSFVMYLGLMIWP 269 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCcCHHHHHHHHHHHHHHHHH
Confidence 9999999988887777665544443333322222221111 11111111 2345788888888888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEE
Q 000497 1177 LGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGI 1256 (1460)
Q Consensus 1177 l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgI 1256 (1460)
+..+...+.++.....+.+|+.++.+.++|........+ +.+|.|+|+||+|+|+++.+++|+|+||+|+|||++||
T Consensus 270 l~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~~~~---~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~i 346 (569)
T PRK10789 270 MLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSEPVP---EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGI 346 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCC---CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEE
Confidence 999999999999999999999999987654321111111 23568999999999976556799999999999999999
Q ss_pred ECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCC-CCChHHHHHHHH
Q 000497 1257 VGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLE 1335 (1460)
Q Consensus 1257 vGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~ 1335 (1460)
+|+||||||||+++|.|+++|++|+|.+||.|+++++.+++|+++++|||+|++|+||+||||.++. ..+|++++++++
T Consensus 347 vG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~ 426 (569)
T PRK10789 347 CGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVAR 426 (569)
T ss_pred ECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998774 578999999999
Q ss_pred HhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 000497 1336 KCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITI 1413 (1460)
Q Consensus 1336 ~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~I 1413 (1460)
.+++++++.++ |+||.++++|.+||||||||++||||++++|+|+|||||||+||+++++.+.+.|++..+++|+|+|
T Consensus 427 ~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~i 506 (569)
T PRK10789 427 LASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIIS 506 (569)
T ss_pred HcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEE
Confidence 99999999988 9999999999999999999999999999999999999999999999999999999988789999999
Q ss_pred ccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHh
Q 000497 1414 AHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1457 (1460)
Q Consensus 1414 aHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~ 1457 (1460)
|||++++..||+|++|++|+++|.|+|++|++++ +.|++|++.
T Consensus 507 tH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~y~~l~~~ 549 (569)
T PRK10789 507 AHRLSALTEASEILVMQHGHIAQRGNHDQLAQQS-GWYRDMYRY 549 (569)
T ss_pred ecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcC-ChHHHHHHH
Confidence 9999999999999999999999999999999865 689999874
No 35
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=5.6e-68 Score=673.38 Aligned_cols=543 Identities=22% Similarity=0.300 Sum_probs=423.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000497 906 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 985 (1460)
Q Consensus 906 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 985 (1460)
+++.++..++....++.+++..+..... .....++..++++.++..+..++..........+...++++++++++++
T Consensus 25 ~~~~~~~~~~~~~~p~~~~~iid~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~ 101 (585)
T TIGR01192 25 VIANITLAAITIAEPILFGRIIDAISSK---SDVLPTLALWAGFGVFNTIAYVLVAREADRLAHGRRATLLTEAFGRIIS 101 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3444555566666666666655532111 1111222222223333333333334444455555566677799999999
Q ss_pred CccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 986 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1065 (1460)
Q Consensus 986 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr 1065 (1460)
.|++||++.++|++++|+++|++.+.+.....+...+..++.+++.++++.+.+|.+.++++.+.+++..+.+.+.+..+
T Consensus 102 l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~ 181 (585)
T TIGR01192 102 MPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGILYILIAKLVMQRTK 181 (585)
T ss_pred CCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998877766666666666666666667777777766655555555555566666666
Q ss_pred HHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1066 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1145 (1460)
Q Consensus 1066 ~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 1145 (1460)
+..+......+.+.+++.|+++|+++||+|+.++.+.+++.+..++..+..+.......+......++..+...++.++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g 261 (585)
T TIGR01192 182 NGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMASTISMMCILVIG 261 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666777889999999999999999999999999998888877766655443333332222222222111111111
Q ss_pred HHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCC-CCccE
Q 000497 1146 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWP-FQGLI 1224 (1460)
Q Consensus 1146 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp-~~g~I 1224 (1460)
... ...+..+.|.+..++.|+..+..++..+...+.++.....+.+|+.++.+.+++...... + ..++ ..+.|
T Consensus 262 ~~~----v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-~-~~~~~~~~~i 335 (585)
T TIGR01192 262 TVL----VIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD-A-PELPNVKGAV 335 (585)
T ss_pred HHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc-C-CCCCCCCCeE
Confidence 110 012345688888888888889999999999999999999999999999876554321111 1 1122 35689
Q ss_pred EEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000497 1225 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1304 (1460)
Q Consensus 1225 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iV 1304 (1460)
+|+||+|+|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+|+.+++.+++|+++++|
T Consensus 336 ~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 414 (585)
T TIGR01192 336 EFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATV 414 (585)
T ss_pred EEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEE
Confidence 999999999753 4689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCccCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000497 1305 PQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1381 (1460)
Q Consensus 1305 pQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1381 (1460)
||||.+|++|+||||.++. ..+|++++++++.+++++++.++ |+||.++++|.+||||||||++||||++++|+|||
T Consensus 415 ~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ili 494 (585)
T TIGR01192 415 FQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILV 494 (585)
T ss_pred ccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998764 46889999999999999999887 99999999999999999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhhC
Q 000497 1382 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1459 (1460)
Q Consensus 1382 LDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1459 (1460)
||||||+||.++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|++++ +.|+++++...
T Consensus 495 lDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~y~~l~~~~~ 571 (585)
T TIGR01192 495 LDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKD-GRFYKLLRRSG 571 (585)
T ss_pred EECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCC-ChHHHHHHhCc
Confidence 999999999999999999999888899999999999999999999999999999999999999865 69999998653
No 36
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.2e-67 Score=684.91 Aligned_cols=538 Identities=21% Similarity=0.252 Sum_probs=443.4
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 269 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 348 (1460)
Q Consensus 269 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (1460)
.+++..++.+++.++...++.++..++.++.|++++.++|.+....+....+.++++++++.++..++.....+...+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (686)
T TIGR03797 125 DLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLE 204 (686)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566778888888999999999999999999999998764333344455566666777778888888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000497 349 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGL 426 (1460)
Q Consensus 349 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~ 426 (1460)
.++...+...+|+|.++++...+++.++|++++.++ |++.+.+.... +..+...++-++ ++++++..-++.+++.+
T Consensus 205 ~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l 282 (686)
T TIGR03797 205 TRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALL-NLGLMFYYSWKLALVAV 282 (686)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888899999999987 78888775432 233344444333 33333333333444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 427 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 506 (1460)
Q Consensus 427 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 506 (1460)
+++++.+.+..++.+.+.+..++.++..+++.+.+.|.++|+++||.+|.|+.+.+++++..++..+...+......+..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (686)
T TIGR03797 283 ALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLT 362 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555677788888899999999999999999999999999999999999888888776666666666555555444
Q ss_pred HHHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhh
Q 000497 507 FFWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 584 (1460)
Q Consensus 507 ~~~~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~ 584 (1460)
.+...... .+.++.+|+|.+.++.+|.|.++++.+++..+..|+..++..+..+.++.++++|+.++++.++..+..
T Consensus 363 ~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~- 441 (686)
T TIGR03797 363 VFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA- 441 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC-
Confidence 33333222 233456778888889999999999999999999999999999999999999999999999765422110
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC
Q 000497 585 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 664 (1460)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~ 664 (1460)
. ..+ ......|+++|++|+|++++ +++|+|+||+|++||.++|+|+||||||||+++|+|+++|
T Consensus 442 ~--~~~----------~~~~~~I~~~nvsf~Y~~~~----~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p 505 (686)
T TIGR03797 442 K--TDP----------GKLSGAIEVDRVTFRYRPDG----PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP 505 (686)
T ss_pred c--CCC----------CCCCceEEEEEEEEEcCCCC----ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 0 000 11235799999999997432 3459999999999999999999999999999999999999
Q ss_pred CCeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000497 665 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 731 (1460)
Q Consensus 665 ~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~ 731 (1460)
++|+|.++| .||||||+|++|+|||||||.++++.++++..++++.|+++++++.+|+|++|.+||+
T Consensus 506 ~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 506 ESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred CCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 999999987 5999999999999999999999988899999999999999999999999999999999
Q ss_pred CCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000497 732 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 811 (1460)
Q Consensus 732 g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 811 (1460)
|.+|||||||||+||||++++|+|++||||||+||+++++++.+. +.. . ++|+|+||||++.++.||+|++|++|+
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~-L~~-~--~~T~IiItHr~~~i~~~D~Iivl~~G~ 661 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSES-LER-L--KVTRIVIAHRLSTIRNADRIYVLDAGR 661 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHH-h--CCeEEEEecChHHHHcCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999988 333 2 589999999999999999999999999
Q ss_pred EEEecCHHHHHhccccCc
Q 000497 812 VKWIGSSADLAVSLYSGF 829 (1460)
Q Consensus 812 i~~~g~~~~l~~~~~~~~ 829 (1460)
|+++|+++|+.++.+.+.
T Consensus 662 iv~~G~~~~Ll~~~~~y~ 679 (686)
T TIGR03797 662 VVQQGTYDELMAREGLFA 679 (686)
T ss_pred EEEECCHHHHHhCCcHHH
Confidence 999999999987655443
No 37
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.6e-67 Score=686.98 Aligned_cols=544 Identities=20% Similarity=0.210 Sum_probs=445.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 271 VRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLK 350 (1460)
Q Consensus 271 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (1460)
++..++.+++.++...+..++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+++.+
T Consensus 145 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (710)
T TIGR03796 145 LWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIK 224 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445666777788888899999999999999999999876533333344556666667777888888888999999999
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000497 351 LRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAIT 429 (1460)
Q Consensus 351 ~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~ 429 (1460)
+...+...+|+|.++++...+.+.++|++++.++.| +.+.++.. .+..+....+.+++.+++++..-++.+++.++.+
T Consensus 225 ~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 303 (710)
T TIGR03796 225 LAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFA 303 (710)
T ss_pred HHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988889999999999888 56776543 3444444444444444444443334444444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 430 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 509 (1460)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 509 (1460)
++.+.+..++.++..+..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++.+.++.+...+......+...+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (710)
T TIGR03796 304 AINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLP 383 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556677788888888999999999999999999999999999999999999999988888887776666555444333
Q ss_pred HHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhc
Q 000497 510 ATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 587 (1460)
Q Consensus 510 ~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~ 587 (1460)
..... .+.++++|+|.+.++.+|.|.++++++++..+..|+..++..+..+.++.++++|+.++++.++..+.....
T Consensus 384 ~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~- 462 (710)
T TIGR03796 384 TLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEE- 462 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc-
Confidence 32222 234567788888899999999999999999999999999999999999999999999999765432211000
Q ss_pred CCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCe
Q 000497 588 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 667 (1460)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G 667 (1460)
.... ...........|+++|++|+|+..+ +++|+|+||+|++||.++|+||||||||||+++|+|+++|++|
T Consensus 463 ~~~~----~~~~~~~~~~~I~~~~vsf~y~~~~----~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G 534 (710)
T TIGR03796 463 APAA----GSEPSPRLSGYVELRNITFGYSPLE----PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSG 534 (710)
T ss_pred cccc----ccccCCCCCCeEEEEEEEEecCCCC----CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 0000 0000011235799999999997532 3459999999999999999999999999999999999999999
Q ss_pred EEEEeC-------------cEEEEcCCCCCCCccHHHHHccCC-CCChHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000497 668 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 733 (1460)
Q Consensus 668 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~ 733 (1460)
+|.++| .|+||||+|++|++||||||.++. +.+++++.++++.++++++++.+|+|++|.+||+|.
T Consensus 535 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~ 614 (710)
T TIGR03796 535 EILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGA 614 (710)
T ss_pred EEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCC
Confidence 999987 599999999999999999999875 578999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000497 734 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 813 (1460)
Q Consensus 734 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 813 (1460)
+|||||||||+||||++++|+|+|||||||+||+++++++++.+ .. .++|+|+||||++.++.||+|++|++|+++
T Consensus 615 ~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l-~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~ 690 (710)
T TIGR03796 615 NLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNL-RR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVV 690 (710)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHH-Hh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999984 22 479999999999999999999999999999
Q ss_pred EecCHHHHHhccccC
Q 000497 814 WIGSSADLAVSLYSG 828 (1460)
Q Consensus 814 ~~g~~~~l~~~~~~~ 828 (1460)
++|+++|+++..+.+
T Consensus 691 ~~G~~~~Ll~~~~~y 705 (710)
T TIGR03796 691 QRGTHEELWAVGGAY 705 (710)
T ss_pred EecCHHHHHHcCCcH
Confidence 999999998765544
No 38
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=7.2e-68 Score=668.57 Aligned_cols=515 Identities=22% Similarity=0.284 Sum_probs=405.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccC-CCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000497 907 LSAILMQASRNGNDLWLSYWVDTTG-SSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 985 (1460)
Q Consensus 907 ~~~~~~~~~~~~~~~wl~~w~~~~~-~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 985 (1460)
++.++..++....++.+++..+... ..........+++.++++.++..++.+++.+.....+.+...+++.++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~ 89 (529)
T TIGR02857 10 LLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVAA 89 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455555555665555554321 111111223345556666777778888888888899999999999999999999
Q ss_pred CccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 986 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1065 (1460)
Q Consensus 986 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr 1065 (1460)
.|..+|++.++|++++|+++|++.+++.+...+..++..++.+++.++++.+.+|+++++++...++...+...+.+..+
T Consensus 90 ~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~ 169 (529)
T TIGR02857 90 LGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWAAQ 169 (529)
T ss_pred CCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888777777776666666666666666666544333222222111222222222
Q ss_pred HHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 000497 1066 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIA-TM 1144 (1460)
Q Consensus 1066 ~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~-~~ 1144 (1460)
...+......+.+.+++.|+++|+++||+|+.|+++.+++.+..++..+..........+......++..+...++. +.
T Consensus 170 ~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (529)
T TIGR02857 170 AAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVYI 249 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223334445677899999999999999999999999999988888777766655555555555544433222211 11
Q ss_pred HHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccE
Q 000497 1145 AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLI 1224 (1460)
Q Consensus 1145 ~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I 1224 (1460)
..... .+..+.|.+..++.++..+..++..+...+.++.....+.+|+.++.+.++++.... +...+..+.|
T Consensus 250 ~~~~~-----~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~~~~~~~i 321 (529)
T TIGR02857 250 GFRLL-----AGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVTAAPAPSL 321 (529)
T ss_pred HHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCCCCCCCeE
Confidence 11111 234567777788888888899999999999999999999999999998554322111 1112234689
Q ss_pred EEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000497 1225 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1304 (1460)
Q Consensus 1225 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iV 1304 (1460)
+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++.+++|+++++|
T Consensus 322 ~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v 401 (529)
T TIGR02857 322 EFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWV 401 (529)
T ss_pred EEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEE
Confidence 99999999976555799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCccCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000497 1305 PQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1381 (1460)
Q Consensus 1305 pQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1381 (1460)
||||++|+|||||||.++. ..+|++++++++.++++++++++ ||||.++|+|.+||||||||++||||++++|+|+|
T Consensus 402 ~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ili 481 (529)
T TIGR02857 402 PQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLL 481 (529)
T ss_pred cCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998764 46889999999999999999999 99999999999999999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEE
Q 000497 1382 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILIL 1429 (1460)
Q Consensus 1382 LDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl 1429 (1460)
||||||+||++|++.+++.|++..+++|+|+||||+++++.||+|+||
T Consensus 482 lDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 482 LDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred EeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999888899999999999999999999986
No 39
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=5.6e-67 Score=679.58 Aligned_cols=535 Identities=21% Similarity=0.288 Sum_probs=444.8
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 270 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 349 (1460)
Q Consensus 270 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (1460)
.++..++.+++.+....++.++..++.++.|++++.++|.+....+....+.++++++++.++.+++.....+...+++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (694)
T TIGR03375 137 WFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGK 216 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677888888888899999999999999999999987543333344445555666667778888888888999999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000497 350 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGLA 427 (1460)
Q Consensus 350 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~ 427 (1460)
++...+...+|+|.++++... .+.++|++++.+ .|++.+.+.... +..+...++.++..+++++. -++.+++.++
T Consensus 217 ~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~l~li~l~ 293 (694)
T TIGR03375 217 KADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAII-GGPLVWVPLV 293 (694)
T ss_pred HHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHH
Confidence 999999999999999999887 677899999998 799999986542 33344444444443334333 3334444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 428 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 507 (1460)
Q Consensus 428 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 507 (1460)
++++.+.+..++.+++.+..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++..++..+...+..........
T Consensus 294 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (694)
T TIGR03375 294 AIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATN 373 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555667778888999999999999999999999999999999999999999999998888777777776666655444
Q ss_pred HHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhh
Q 000497 508 FWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 585 (1460)
Q Consensus 508 ~~~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~ 585 (1460)
+...... .+.++++|+|.+.++.+|+|.+++++.++..+..|+..++..+..+.++.++++|+.++++.++..+....
T Consensus 374 ~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~ 453 (694)
T TIGR03375 374 FAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGTR 453 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 3333222 23356778888888999999999999999999999999999999999999999999999987543221000
Q ss_pred hcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000497 586 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 665 (1460)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~ 665 (1460)
... .......|+++|++|+|+.. + +++|+|+||+|++||.++|+|+||||||||+++|+|+++|+
T Consensus 454 ---~~~--------~~~~~~~I~~~~vsf~Y~~~-~---~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~ 518 (694)
T TIGR03375 454 ---FLH--------RPRLQGEIEFRNVSFAYPGQ-E---TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT 518 (694)
T ss_pred ---CCC--------CCCccceEEEEEEEEEeCCC-C---ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 000 01223579999999999643 1 34599999999999999999999999999999999999999
Q ss_pred CeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000497 666 HGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 731 (1460)
Q Consensus 666 ~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~ 731 (1460)
+|+|.++| .|+||||+|++|++||+|||.++++ .+++++.++++.|+++++++.+|+|++|.+||+
T Consensus 519 ~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 519 EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred CceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 99999987 6999999999999999999999986 889999999999999999999999999999999
Q ss_pred CCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000497 732 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 811 (1460)
Q Consensus 732 g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 811 (1460)
|.+||||||||++||||++++|++++||||||+||+++++.+.+. +.. ..+++|+|+||||++.++.||+|++|++|+
T Consensus 599 G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~-l~~-~~~~~T~iiItHrl~~~~~~D~iivl~~G~ 676 (694)
T TIGR03375 599 GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDR-LKR-WLAGKTLVLVTHRTSLLDLVDRIIVMDNGR 676 (694)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHH-HhCCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999887 433 456899999999999999999999999999
Q ss_pred EEEecCHHHHHhc
Q 000497 812 VKWIGSSADLAVS 824 (1460)
Q Consensus 812 i~~~g~~~~l~~~ 824 (1460)
++++|+|+|+++.
T Consensus 677 i~e~G~~~eLl~~ 689 (694)
T TIGR03375 677 IVADGPKDQVLEA 689 (694)
T ss_pred EEeeCCHHHHHHH
Confidence 9999999999764
No 40
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.4e-66 Score=673.99 Aligned_cols=535 Identities=19% Similarity=0.191 Sum_probs=423.3
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 275 CCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSS 354 (1460)
Q Consensus 275 ~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 354 (1460)
++.+++.++...++.++..++..+.|+++++++|.+....+.......+..++++.++..++.....+...+.+.++...
T Consensus 156 ~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 235 (711)
T TIGR00958 156 SGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLR 235 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456667777888899999999999999999998865322222222233344444555566655666667777888888
Q ss_pred HHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000497 355 IMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLI 433 (1460)
Q Consensus 355 L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~ 433 (1460)
+...+|+|.++.+...+++.++|++.|.++.|++.+.+... .+..++...+.+++++++++..-...+++.++.+++..
T Consensus 236 lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~ 315 (711)
T TIGR00958 236 IREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVF 315 (711)
T ss_pred HHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 88999999999999888889999999999999999987543 45555555555554444333322222233333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000497 434 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATT- 512 (1460)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~- 512 (1460)
.+..++.++..+..++.++..++..+...|.++|+++||.|++|+.+.+++++..++-.+...+.....+.........
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (711)
T TIGR00958 316 LAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLG 395 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777888888888899999999999999999999999999998877777665444444333333222222221111
Q ss_pred -HHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCC
Q 000497 513 -PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 591 (1460)
Q Consensus 513 -~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~ 591 (1460)
...+.++.+|.|.+.++.+|++.+++++.+...+..|+..++..+..+.++.++.+||.+|++.++..+.... ..+
T Consensus 396 ~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~- 472 (711)
T TIGR00958 396 MLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGT--LAP- 472 (711)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--CCC-
Confidence 1223445677888888999999999999999999999999999999999999999999999976543221100 000
Q ss_pred cccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEE
Q 000497 592 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 671 (1460)
Q Consensus 592 ~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~ 671 (1460)
.+....|+++|++|+|+.+++ +++|+|+||+++|||.++||||||||||||+++|+|+++|++|+|.+
T Consensus 473 ---------~~~~~~I~~~nVsf~Y~~~~~---~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 540 (711)
T TIGR00958 473 ---------LNLEGLIEFQDVSFSYPNRPD---VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLL 540 (711)
T ss_pred ---------CCCCCeEEEEEEEEECCCCCC---CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 122356999999999985422 34699999999999999999999999999999999999999999999
Q ss_pred eC-------------cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000497 672 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 737 (1460)
Q Consensus 672 ~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSG 737 (1460)
+| +|+||||+|++|++||||||.+|.+ .+++++.++++.++++++++.+|+|++|.+||+|.+|||
T Consensus 541 dg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 620 (711)
T TIGR00958 541 DGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSG 620 (711)
T ss_pred CCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCH
Confidence 87 5999999999999999999999964 678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecC
Q 000497 738 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 817 (1460)
Q Consensus 738 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 817 (1460)
|||||++||||++++|+|+|||||||+||+++++.+.+. . ..+++|+|+||||++.++.||+|++|++|+|+++|+
T Consensus 621 GQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~~-~---~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt 696 (711)
T TIGR00958 621 GQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQES-R---SRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGT 696 (711)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHHh-h---ccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeC
Confidence 999999999999999999999999999999999988872 2 346899999999999999999999999999999999
Q ss_pred HHHHHhccccC
Q 000497 818 SADLAVSLYSG 828 (1460)
Q Consensus 818 ~~~l~~~~~~~ 828 (1460)
|+|++++.+.+
T Consensus 697 ~~eL~~~~~~y 707 (711)
T TIGR00958 697 HKQLMEDQGCY 707 (711)
T ss_pred HHHHHhCCCch
Confidence 99998765543
No 41
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=5.3e-66 Score=671.84 Aligned_cols=535 Identities=21% Similarity=0.250 Sum_probs=434.6
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 273 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 352 (1460)
Q Consensus 273 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r 352 (1460)
..++.+++.++...+..++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+++.++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (708)
T TIGR01193 149 PLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQRLS 228 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777788888889999999999999999999987643333333445555666667778888888888899999999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000497 353 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 430 (1460)
Q Consensus 353 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~ 430 (1460)
..+...+|+|.++++...+++.++|++++.++ |.+.+.+.... +..+...++.++..+++++....+ +++.+++++
T Consensus 229 ~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l-~li~l~~~~ 306 (708)
T TIGR01193 229 IDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLL-FLLSLLSIP 306 (708)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHH
Confidence 99999999999999999988899999999998 99988875432 222334444443333343333322 233333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 431 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 510 (1460)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 510 (1460)
+.+.+..++.++.++..++.++..+++.+...|.++|+++||.+|+|+.+.+++++..++..+...+..........+..
T Consensus 307 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (708)
T TIGR01193 307 VYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKA 386 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455677788888999999999999999999999999999999999999888877766555555444444333332222
Q ss_pred HHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcC
Q 000497 511 TTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 588 (1460)
Q Consensus 511 ~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~ 588 (1460)
... ..+.++++|+|.+.++.+|+|.++++.++...+..|+..+...+..+.+++++++|+.++++.++..+.....
T Consensus 387 ~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~~-- 464 (708)
T TIGR01193 387 VTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKKR-- 464 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc--
Confidence 221 2234567888988999999999999999999999999999999999999999999999999765432211000
Q ss_pred CCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeE
Q 000497 589 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 668 (1460)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~ 668 (1460)
.+ .......|+++|++|+|+.+ +++|+|+||+|++|+.++|+||||||||||+++|+|+++|++|+
T Consensus 465 ~~---------~~~~~~~I~~~~vsf~y~~~-----~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~ 530 (708)
T TIGR01193 465 TE---------LNNLNGDIVINDVSYSYGYG-----SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGE 530 (708)
T ss_pred cC---------CCCCCCcEEEEEEEEEcCCC-----CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcE
Confidence 00 01223579999999999632 24599999999999999999999999999999999999999999
Q ss_pred EEEeC-------------cEEEEcCCCCCCCccHHHHHccCC--CCChHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000497 669 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 733 (1460)
Q Consensus 669 i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~--~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~ 733 (1460)
|.++| .||||||+|++|++||||||.++. +.+++++.++++.++++++++.+|+|++|.+||+|.
T Consensus 531 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~ 610 (708)
T TIGR01193 531 ILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGS 610 (708)
T ss_pred EEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCC
Confidence 99987 599999999999999999999983 478889999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000497 734 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 813 (1460)
Q Consensus 734 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 813 (1460)
+|||||||||+||||++++|+|+|||||||+||+++++++.+.+ .. .+++|+|+||||++.+..||+|++|++|+++
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L-~~--~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~ 687 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNL-LN--LQDKTIIFVAHRLSVAKQSDKIIVLDHGKII 687 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHH-HH--hcCCEEEEEecchHHHHcCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999998884 33 3679999999999999999999999999999
Q ss_pred EecCHHHHHhccccC
Q 000497 814 WIGSSADLAVSLYSG 828 (1460)
Q Consensus 814 ~~g~~~~l~~~~~~~ 828 (1460)
+.|+++|+++..+.+
T Consensus 688 ~~G~~~~L~~~~~~y 702 (708)
T TIGR01193 688 EQGSHDELLDRNGFY 702 (708)
T ss_pred EECCHHHHHhcCCcH
Confidence 999999998765544
No 42
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.1e-67 Score=627.90 Aligned_cols=475 Identities=25% Similarity=0.374 Sum_probs=358.4
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC----CeEEEEeC--------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT----HGSIHASG-------- 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~----~G~i~~~~-------- 673 (1460)
.++++|.+..+.... .+ ..+++|+||++.+||.++|||.|||||||+.++|+|..++. +|+|.++|
T Consensus 5 lL~V~nL~v~~~~~~-~~-~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~ 82 (539)
T COG1123 5 LLEVENLTVEFATDG-GR-VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSE 82 (539)
T ss_pred eEEEeceEEEEecCC-cc-eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCH
Confidence 578899998887652 22 35799999999999999999999999999999999999887 89998876
Q ss_pred ---------cEEEEcCCCC-CCCc--cHHHHHc----cCCCC----ChHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000497 674 ---------SIAYVPQVPW-ILSG--TIRDNIL----FGKNY----DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 733 (1460)
Q Consensus 674 ---------~i~y~~Q~p~-l~~~--ti~~nI~----~g~~~----~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~ 733 (1460)
.|||++|+|+ .+|. ||.+-|. ..... ..++..+.++..+|.+.... ..-..
T Consensus 83 ~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPh 153 (539)
T COG1123 83 REMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPH 153 (539)
T ss_pred HHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCc
Confidence 5999999997 5554 7766664 22222 12334455556666543322 34566
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeE
Q 000497 734 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 812 (1460)
Q Consensus 734 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i 812 (1460)
.|||||||||.||+||..+|++||+||||+|||+.++.+|++.+.......|.++|+|||++..+.+ ||+|+||.+|++
T Consensus 154 eLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~i 233 (539)
T COG1123 154 QLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEI 233 (539)
T ss_pred ccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEE
Confidence 9999999999999999999999999999999999999999987332223457799999999999876 999999999999
Q ss_pred EEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHHHH
Q 000497 813 KWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKN 892 (1460)
Q Consensus 813 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~ 892 (1460)
+|.|+.+++..+...-+ ..
T Consensus 234 VE~G~~~~i~~~p~hpY-------------------------------------------------------------T~ 252 (539)
T COG1123 234 VETGPTEEILSNPQHPY-------------------------------------------------------------TR 252 (539)
T ss_pred EEecCHHHHHhccCCcc-------------------------------------------------------------cH
Confidence 99999998864321000 00
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 893 YAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAA 972 (1460)
Q Consensus 893 y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 972 (1460)
-+ |.. .+....
T Consensus 253 ~L-------------------------------l~a-----~p~~~~--------------------------------- 263 (539)
T COG1123 253 GL-------------------------------LAA-----VPRLGD--------------------------------- 263 (539)
T ss_pred HH-------------------------------Hhh-----CCCccc---------------------------------
Confidence 00 000 000000
Q ss_pred HHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHH
Q 000497 973 VKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFI 1052 (1460)
Q Consensus 973 ~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~ 1052 (1460)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1053 YSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQL 1132 (1460)
Q Consensus 1053 ~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~ 1132 (1460)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCC
Q 000497 1133 LAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQ 1212 (1460)
Q Consensus 1133 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~ 1212 (1460)
. .. ...+.+
T Consensus 264 -------------------~--~~--------------------------------------------~~~~~~------ 272 (539)
T COG1123 264 -------------------E--KI--------------------------------------------IRLPRR------ 272 (539)
T ss_pred -------------------c--cc--------------------------------------------cccccc------
Confidence 0 00 000000
Q ss_pred CCCCCCCCCccEEEEEEEEEecCC---------CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEE
Q 000497 1213 SLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1283 (1460)
Q Consensus 1213 ~~~~~wp~~g~I~f~nvs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ 1283 (1460)
.+ -+....++++|++++|... ...+++||||++++||.+||||.||||||||.++|+|+++|++|+|.
T Consensus 273 ~~---~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~ 349 (539)
T COG1123 273 GP---LRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSII 349 (539)
T ss_pred cc---cccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE
Confidence 00 0012358899999999741 24689999999999999999999999999999999999999999999
Q ss_pred ECCEe--CCCCChHHHhcccEEEeCCCcc--C-CccHHHhcC-cCCCCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCC
Q 000497 1284 VDGLN--IINTPVRDLRGRFAVVPQSPFL--F-EGSLRDNLD-PFHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESG 1356 (1460)
Q Consensus 1284 IDG~d--i~~i~~~~lR~~i~iVpQdp~l--f-~gTIR~NLd-p~~~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G 1356 (1460)
++|.| .+.-....+|+++-+|.|||+- - ..||+++|. |...+.... .+-.+..+.+.++..||.. ..+...
T Consensus 350 ~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~--~~~~~~rv~~ll~~VgL~~~~l~ryP 427 (539)
T COG1123 350 FDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGS--GAERRARVAELLELVGLPPEFLDRYP 427 (539)
T ss_pred EeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccc--hHHHHHHHHHHHHHcCCCHHHHhcCc
Confidence 99977 3333355688899999999973 2 359999984 322111100 1111112233333336665 356667
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCe
Q 000497 1357 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGH 1433 (1460)
Q Consensus 1357 ~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~ 1433 (1460)
..||||||||+||||||..+|++||+|||||+||+-+...|.+.|.+.-+ +.|.|+|+|++..++. ||||+||++|+
T Consensus 428 ~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~ 507 (539)
T COG1123 428 HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGR 507 (539)
T ss_pred hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCe
Confidence 78999999999999999999999999999999999999999999876543 7999999999999987 89999999999
Q ss_pred EEEEcChhHHhccCCcHHHHHHHh
Q 000497 1434 LVEQGNPQTLLQDECSVFSSFVRA 1457 (1460)
Q Consensus 1434 IvE~G~p~eLl~~~~~~f~~l~~~ 1457 (1460)
|||.|+.+++.+++...|.+...+
T Consensus 508 iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 508 IVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred EEEeCCHHHHhcCCCChHHHHHHH
Confidence 999999999999988778776544
No 43
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=6.8e-66 Score=651.25 Aligned_cols=525 Identities=19% Similarity=0.216 Sum_probs=402.7
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000497 907 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 986 (1460)
Q Consensus 907 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 986 (1460)
++.++...+....++.++...+.............++.+++++.++..++.+++.+.....+.+....++.++++++++.
T Consensus 13 ~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~ 92 (544)
T TIGR01842 13 LFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASFSA 92 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33444445555556666655543211111112233444555556667777888888888899999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhccchHH-HHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 987 PVLFFDQTPGGRILNRFSSDLYMIDDSLPF-ILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1065 (1460)
Q Consensus 987 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~-~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr 1065 (1460)
|+.. .+...+++++|++.+.+.+.. .+..++..++.++. ++++.+.+|++.++++...+++..+.....+..+
T Consensus 93 ~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~~~ 166 (544)
T TIGR01842 93 TLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIY-LLVCFLLHPWIGILALGGAVVLVGLALLNNRATK 166 (544)
T ss_pred cccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 9842 356788999999999876654 34444444443333 3445566666554333222222222222233223
Q ss_pred HHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1066 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1145 (1460)
Q Consensus 1066 ~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 1145 (1460)
...+......+...+++.|+++|+++||+|+.|+.+.+++.+..++..+..+.......+.......+..+...++..+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 246 (544)
T TIGR01842 167 KPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGLG 246 (544)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333345566677899999999999999999999999999888887776655444433333323222221111111111
Q ss_pred HHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEE
Q 000497 1146 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIE 1225 (1460)
Q Consensus 1146 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~ 1225 (1460)
... ...+..++|.+..++.++..+..++..+...+.++.....+.+|+.++.+.++|+... ... -+.++.|+
T Consensus 247 ~~l----~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-~~~---~~~~~~i~ 318 (544)
T TIGR01842 247 AYL----AIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA-MPL---PEPEGHLS 318 (544)
T ss_pred HHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC-CCC---CCCCCeEE
Confidence 100 0124567888888889999999999999999999999999999999999876653211 111 12356899
Q ss_pred EEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEe
Q 000497 1226 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP 1305 (1460)
Q Consensus 1226 f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVp 1305 (1460)
++||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.|+.+++.+.+|+++++||
T Consensus 319 ~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~ 398 (544)
T TIGR01842 319 VENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLP 398 (544)
T ss_pred EEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEec
Confidence 99999999765567999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000497 1306 QSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1382 (1460)
Q Consensus 1306 Qdp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1382 (1460)
|||++|++|+|||+..+++ .+|++++++++.++++++++++ |+||.++++|.+||||||||++||||++++|+||||
T Consensus 399 q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ilil 478 (544)
T TIGR01842 399 QDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVL 478 (544)
T ss_pred CCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999999986654 7899999999999999999999 999999999999999999999999999999999999
Q ss_pred eccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhc
Q 000497 1383 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1383 DEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
|||||+||.++++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|+||++
T Consensus 479 DEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 479 DEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred eCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999998875 6899999999999999999999999999999999999976
No 44
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=6.1e-66 Score=701.03 Aligned_cols=555 Identities=19% Similarity=0.242 Sum_probs=425.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 899 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 978 (1460)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ 978 (1460)
+..+++.+++.++..++....++.+...++... .......++..+++++++..++.+++.+++.+.+.+...+++.+
T Consensus 59 ~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~~ 135 (1466)
T PTZ00265 59 RKLLGVSFVCATISGGTLPFFVSVFGVIMKNMN---LGENVNDIIFSLVLIGIFQFILSFISSFCMDVVTTKILKTLKLE 135 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444554444555555554321 11123344556666777788888899999999999999999999
Q ss_pred HHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 979 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1058 (1460)
Q Consensus 979 ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~ 1058 (1460)
++++++++|++|||..+.|++.+|+++|++.+...+...+..++..++.+++.++++++.+|.+.++++.++.+++.+..
T Consensus 136 ~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~ 215 (1466)
T PTZ00265 136 FLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICGV 215 (1466)
T ss_pred HHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888888888888888888888888888766554444333333333
Q ss_pred HHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1059 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII 1138 (1460)
Q Consensus 1059 ~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~ 1138 (1460)
.+.+..+...+......+...+.+.|+++|+++||+|+.|+.+.++|.+..+...+..+.......+......++..+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 295 (1466)
T PTZ00265 216 ICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIGMINGFILASY 295 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444344444444445667789999999999999999999999999988888777765554433332222222221111
Q ss_pred HHHHHHH-HHhhcCC---CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCC
Q 000497 1139 SFIATMA-VIGSRGN---LPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSL 1214 (1460)
Q Consensus 1139 ~~~~~~~-v~~~~~~---~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~ 1214 (1460)
.++.++. .....+. ...+..+.|.+...+.+.+.....+..+...+..+..+..|.+|+.+.++.+++..... .
T Consensus 296 ~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~~--~ 373 (1466)
T PTZ00265 296 AFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRKPLVENND--D 373 (1466)
T ss_pred HHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC--C
Confidence 1111111 0001110 00012234444433333333344455667778899999999999999998766532111 1
Q ss_pred CCCCCCCccEEEEEEEEEecCC-CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEE-CCEeCCCC
Q 000497 1215 SPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILV-DGLNIINT 1292 (1460)
Q Consensus 1215 ~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~I-DG~di~~i 1292 (1460)
....|..+.|+|+||+|+|+.. ..++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|.+ ||.|++++
T Consensus 374 ~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~ 453 (1466)
T PTZ00265 374 GKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDI 453 (1466)
T ss_pred CccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhC
Confidence 1112334589999999999743 246999999999999999999999999999999999999999999999 67999999
Q ss_pred ChHHHhcccEEEeCCCccCCccHHHhcCcCC-------------------------------------------------
Q 000497 1293 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH------------------------------------------------- 1323 (1460)
Q Consensus 1293 ~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~------------------------------------------------- 1323 (1460)
+.+++|++|++|||+|.+|++||+|||.++.
T Consensus 454 ~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (1466)
T PTZ00265 454 NLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNE 533 (1466)
T ss_pred CHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhcccccchhh
Confidence 9999999999999999999999999997631
Q ss_pred ---------CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHH
Q 000497 1324 ---------MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQ 1392 (1460)
Q Consensus 1324 ---------~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~ 1392 (1460)
..+|++++++++++++++++..+ |+||.++++|.+||||||||++||||++++|+|||||||||+||++
T Consensus 534 ~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~ 613 (1466)
T PTZ00265 534 LIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNK 613 (1466)
T ss_pred hhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHH
Confidence 24678999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCC--------------------------------------
Q 000497 1393 TASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHG-------------------------------------- 1432 (1460)
Q Consensus 1393 te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G-------------------------------------- 1432 (1460)
+++.|++.|++.. +++|+|+||||+++++.||+|+||++|
T Consensus 614 se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1466)
T PTZ00265 614 SEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNNNNNNN 693 (1466)
T ss_pred HHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccccccccccccccccccccccccc
Confidence 9999999999875 489999999999999999999999986
Q ss_pred ---------eEEEEcChhHHhccCCcHHHHHHHhh
Q 000497 1433 ---------HLVEQGNPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1433 ---------~IvE~G~p~eLl~~~~~~f~~l~~~~ 1458 (1460)
+|+|+|+|+||+++++|.|+.|++.+
T Consensus 694 ~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q 728 (1466)
T PTZ00265 694 NNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQ 728 (1466)
T ss_pred ccccccCCceeEeeCCHHHHHhccCCcHHHHHhhh
Confidence 59999999999986788999999764
No 45
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=6.4e-65 Score=649.42 Aligned_cols=540 Identities=18% Similarity=0.198 Sum_probs=429.8
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 272 RAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 351 (1460)
Q Consensus 272 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1460)
...++.+++.++..++..++..++..+.|++++.+++.+..+........++.+++++.++..++.....+...+++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 96 (582)
T PRK11176 17 WPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKV 96 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667777777777777777888899999999987754322222222333344455566666666777788889999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000497 352 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 430 (1460)
Q Consensus 352 r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~ 430 (1460)
...+...+|+|.++++.....+.+.|++++.++.|++.+.+.. ..+..++..++.+++.+.+++..-++.+++.+++++
T Consensus 97 ~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~ 176 (582)
T PRK11176 97 VMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAP 176 (582)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888999999999999999998743 345555555655555554444433333333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 431 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 510 (1460)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 510 (1460)
+.+.+..++.+++++..++.++..++..+...|.++|+++||.+|+|+.+.+++++.-++-.+...+..........+..
T Consensus 177 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (582)
T PRK11176 177 IVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQ 256 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555667788888888999999999999999999999999999999988888877655444444444443333322222
Q ss_pred HHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcC
Q 000497 511 TTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 588 (1460)
Q Consensus 511 ~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~ 588 (1460)
... ..+.++.++.|.+.++.++++.+.++++++..+..|+..+...+..+.+++.+++|+.++++.++..+...
T Consensus 257 ~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~---- 332 (582)
T PRK11176 257 LIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGK---- 332 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCC----
Confidence 221 22344566777777889999999999999999999999999999999999999999999997654321100
Q ss_pred CCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeE
Q 000497 589 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 668 (1460)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~ 668 (1460)
.. .+.....++++|++|+|++.+ +++|+|+||++++||.++|+|+||||||||+++|+|+++|++|+
T Consensus 333 ~~---------~~~~~~~i~~~~vsf~y~~~~----~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~ 399 (582)
T PRK11176 333 RV---------IERAKGDIEFRNVTFTYPGKE----VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGE 399 (582)
T ss_pred cC---------CCCCCCeEEEEEEEEecCCCC----CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCce
Confidence 00 011234699999999996431 24599999999999999999999999999999999999999999
Q ss_pred EEEeC-------------cEEEEcCCCCCCCccHHHHHccCC--CCChHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000497 669 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 733 (1460)
Q Consensus 669 i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~--~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~ 733 (1460)
|.++| .|+||||+|.+|++||||||.+|. ++++++++++++.++++++++.+|+|++|.+||+|.
T Consensus 400 I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~ 479 (582)
T PRK11176 400 ILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGV 479 (582)
T ss_pred EEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCC
Confidence 99987 589999999999999999999985 378999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000497 734 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 813 (1460)
Q Consensus 734 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 813 (1460)
+||||||||++||||+|++|+|++|||||||||+++++.+++. +.. +.+++|+|+||||++.++.||+|++|++|+++
T Consensus 480 ~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~-l~~-~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~ 557 (582)
T PRK11176 480 LLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAA-LDE-LQKNRTSLVIAHRLSTIEKADEILVVEDGEIV 557 (582)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999887 333 44679999999999999999999999999999
Q ss_pred EecCHHHHHhccccCcc
Q 000497 814 WIGSSADLAVSLYSGFW 830 (1460)
Q Consensus 814 ~~g~~~~l~~~~~~~~~ 830 (1460)
++|+++++++..+.+.+
T Consensus 558 e~g~~~~l~~~~~~y~~ 574 (582)
T PRK11176 558 ERGTHAELLAQNGVYAQ 574 (582)
T ss_pred EeCCHHHHHhCCChHHH
Confidence 99999999877654443
No 46
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-67 Score=591.44 Aligned_cols=487 Identities=25% Similarity=0.388 Sum_probs=390.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhh-HHHHHHH
Q 000497 963 SFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVV-LSYVQVF 1041 (1460)
Q Consensus 963 ~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~-i~~~~~~ 1041 (1460)
++...+..+-+.+--+.|.++.+..+.|.-+..+|-+..-......-|+..+-..+...+-.++-+....++ .....||
T Consensus 5 ~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~ 84 (497)
T COG5265 5 LFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWW 84 (497)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccH
Confidence 344555666677777888889999999988776665443333333333333333333333333333222222 2234567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1042 FLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELT 1121 (1460)
Q Consensus 1042 ~~~~~ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~ 1121 (1460)
++++.+..+++|.++.-.-..-.-..||.-..+.+..++.-.+++-+-.|+|.||.|+++..++.+.++.++++......
T Consensus 85 f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~ 164 (497)
T COG5265 85 FALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHV 164 (497)
T ss_pred HHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHH
Confidence 77666665555544332222222233444445555666777899999999999999999999999999999999888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000497 1122 ASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM 1201 (1460)
Q Consensus 1122 ~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~ 1201 (1460)
.-.||.+.-..+..........+... ....+..+.|.+...-.++.++..+++.+-..+.++.+++...|+..+..
T Consensus 165 Sl~~Ln~gQ~~I~~~~l~~~m~~s~~----~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl 240 (497)
T COG5265 165 SLLVLNFGQTAIFSTGLRVMMTMSAL----GVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLL 240 (497)
T ss_pred HHHHHHHhhHHHHHHHHHHHHhhcHH----HHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhh
Confidence 77777765554433221111111111 11234567888889999999999999999999999999999999999999
Q ss_pred cCcccccccCCCCCCCCC-CCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCc
Q 000497 1202 DVPQEELCGYQSLSPDWP-FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1280 (1460)
Q Consensus 1202 ~~~~E~~~~~~~~~~~wp-~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G 1280 (1460)
+.+.|-... ...++-|| ..|.|.|+||+|.|.+. .++|+|+||++++|+++||||++|+||||+..+|+|||++++|
T Consensus 241 ~~~~~v~d~-pda~~L~~~~~g~v~F~~V~F~y~~~-r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 241 DVEAEVSDA-PDAPPLWPVRLGAVAFINVSFAYDPR-RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred ccchhhccC-CCCccccccccceEEEEEEEeecccc-chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 887764322 23345575 56899999999999876 5799999999999999999999999999999999999999999
Q ss_pred eEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCC
Q 000497 1281 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1357 (1460)
Q Consensus 1281 ~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~ 1357 (1460)
+|.|||.||..+..+.+|+.||+||||.+||++|+..|+.++++ .+++|++.|++.+++.++++.+ |+||.|||.|-
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 99999999999999999999999999999999999999998765 6899999999999999999999 99999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEE
Q 000497 1358 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1437 (1460)
Q Consensus 1358 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~ 1437 (1460)
.||||||||+++||++|++|+||+||||||+||..||+.||..|++..+++|.++|||||+||.++|.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhHHhccCCcHHHHHHH
Q 000497 1438 GNPQTLLQDECSVFSSFVR 1456 (1460)
Q Consensus 1438 G~p~eLl~~~~~~f~~l~~ 1456 (1460)
|+|+||+++ +|.|++||.
T Consensus 479 g~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 479 GTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred CcHHHHHHc-CChHHHHhc
Confidence 999999997 789999986
No 47
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.4e-64 Score=645.72 Aligned_cols=535 Identities=20% Similarity=0.229 Sum_probs=438.2
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 272 RAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 351 (1460)
Q Consensus 272 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1460)
..+++.+++.++...++.++..++...+|++++.+++...........+.++++++++.++..++.....+...+.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 85 (571)
T TIGR02203 6 WSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKV 85 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778888888889999999999999999999986654332223333444455566667777777778888999999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000497 352 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 430 (1460)
Q Consensus 352 r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~ 430 (1460)
...+...+|+|.++.+.....+.+.|++.+.++.|++++.+... .+..++...+.+++++.+++..-.+.+++.+++++
T Consensus 86 ~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~ 165 (571)
T TIGR02203 86 VRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLP 165 (571)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999888888999999999999999987553 45555555555544444443332333333444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 431 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 510 (1460)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 510 (1460)
+.+.+..++.++.++..++..+..+++.+.+.|.++|+++||.++.|+.+.+++++..++..+...+..........+..
T Consensus 166 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (571)
T TIGR02203 166 VLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQ 245 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566677888888999999999999999999999999999999999998888887776666655555444444333322
Q ss_pred HHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcC
Q 000497 511 TTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 588 (1460)
Q Consensus 511 ~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~ 588 (1460)
.... .+.++.+|.+.+.++.+|++.+++++.++..+..|+..+...+..+.+++++++|+.++++.++..+...
T Consensus 246 ~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~---- 321 (571)
T TIGR02203 246 LIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGT---- 321 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC----
Confidence 2222 2345567778888899999999999999999999999999999999999999999999997654322100
Q ss_pred CCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeE
Q 000497 589 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 668 (1460)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~ 668 (1460)
.+. ......++++|++|+|++.+ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+
T Consensus 322 ~~~---------~~~~~~i~~~~v~f~y~~~~----~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~ 388 (571)
T TIGR02203 322 RAI---------ERARGDVEFRNVTFRYPGRD----RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQ 388 (571)
T ss_pred CCC---------CCCCCeEEEEEEEEEcCCCC----CccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCe
Confidence 000 11234699999999997532 24599999999999999999999999999999999999999999
Q ss_pred EEEeC-------------cEEEEcCCCCCCCccHHHHHccCC--CCChHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000497 669 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 733 (1460)
Q Consensus 669 i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~--~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~ 733 (1460)
|.++| .++||||+|++|++||||||.++. +.+++++.++++.|++++++..+|+|.+|.+|++|.
T Consensus 389 I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~ 468 (571)
T TIGR02203 389 ILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGV 468 (571)
T ss_pred EEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCC
Confidence 99987 499999999999999999999985 588999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000497 734 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 813 (1460)
Q Consensus 734 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 813 (1460)
+||||||||++||||+|++|+|++||||||+||+++++++.+. +.. ..+++|+|+|||+.+.++.||+|++|++|+++
T Consensus 469 ~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~-L~~-~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~ 546 (571)
T TIGR02203 469 LLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAA-LER-LMQGRTTLVIAHRLSTIEKADRIVVMDDGRIV 546 (571)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHH-HhCCCEEEEEehhhHHHHhCCEEEEEeCCEEE
Confidence 9999999999999999999999999999999999999999887 433 45689999999999999999999999999999
Q ss_pred EecCHHHHHhcc
Q 000497 814 WIGSSADLAVSL 825 (1460)
Q Consensus 814 ~~g~~~~l~~~~ 825 (1460)
+.|+++++.+..
T Consensus 547 ~~g~~~~l~~~~ 558 (571)
T TIGR02203 547 ERGTHNELLARN 558 (571)
T ss_pred eeCCHHHHHHcC
Confidence 999999997653
No 48
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-66 Score=657.08 Aligned_cols=492 Identities=22% Similarity=0.312 Sum_probs=354.8
Q ss_pred CceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC----------
Q 000497 604 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 673 (1460)
Q Consensus 604 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 673 (1460)
+..++++|++++|..... ..++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 10 ~~~l~v~~l~~~y~~~~~--~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~ 87 (623)
T PRK10261 10 RDVLAVENLNIAFMQEQQ--KIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQV 87 (623)
T ss_pred CceEEEeceEEEecCCCC--ceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccc
Confidence 346899999999863211 12469999999999999999999999999999999999999999987643
Q ss_pred -----------------cEEEEcCCC--CCCC-ccHHHHHccCC----CCCh----HHHHHHHHHhcchHHHhhccCCCc
Q 000497 674 -----------------SIAYVPQVP--WILS-GTIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDM 725 (1460)
Q Consensus 674 -----------------~i~y~~Q~p--~l~~-~ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~~~~gd~ 725 (1460)
.||||+|+| -++. .||+|||.++. ..+. ++..++++..++.. . .
T Consensus 88 ~~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-------~-~ 159 (623)
T PRK10261 88 IELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPE-------A-Q 159 (623)
T ss_pred cccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCC-------h-h
Confidence 489999998 4554 59999998752 1222 23444555555521 0 1
Q ss_pred ccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhc-CCE
Q 000497 726 AYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADM 803 (1460)
Q Consensus 726 t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~ 803 (1460)
........+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+. +.... ..|+|+|+|||+++.+.. ||+
T Consensus 160 ~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~l-l~~l~~~~g~tvi~itHdl~~~~~~adr 238 (623)
T PRK10261 160 TILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQL-IKVLQKEMSMGVIFITHDMGVVAEIADR 238 (623)
T ss_pred hHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCE
Confidence 123455679999999999999999999999999999999999998888875 33211 237899999999998764 999
Q ss_pred EEEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcc
Q 000497 804 VVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEG 883 (1460)
Q Consensus 804 i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g 883 (1460)
|++|++|++++.|+++++...... .+ ..
T Consensus 239 i~vl~~G~i~~~g~~~~~~~~~~~------~~-----------------------------------~~----------- 266 (623)
T PRK10261 239 VLVMYQGEAVETGSVEQIFHAPQH------PY-----------------------------------TR----------- 266 (623)
T ss_pred EEEeeCCeecccCCHHHhhcCCCC------hh-----------------------------------hh-----------
Confidence 999999999998887765321000 00 00
Q ss_pred cchhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 000497 884 RVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFS 963 (1460)
Q Consensus 884 ~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~ 963 (1460)
.++. +... ...
T Consensus 267 --------~l~~------------------------------~~~~-------~~~------------------------ 277 (623)
T PRK10261 267 --------ALLA------------------------------AVPQ-------LGA------------------------ 277 (623)
T ss_pred --------hhhh------------------------------ccCc-------ccc------------------------
Confidence 0000 0000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHH
Q 000497 964 FAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFL 1043 (1460)
Q Consensus 964 ~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~ 1043 (1460)
+ .|+ .++
T Consensus 278 ------------------------~-------~~~--------------~~~---------------------------- 284 (623)
T PRK10261 278 ------------------------M-------KGL--------------DYP---------------------------- 284 (623)
T ss_pred ------------------------c-------ccc--------------cCC----------------------------
Confidence 0 000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1044 LLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTAS 1123 (1460)
Q Consensus 1044 ~~~ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~ 1123 (1460)
.+.|.. +
T Consensus 285 ------------------------------~~~~~~----~--------------------------------------- 291 (623)
T PRK10261 285 ------------------------------RRFPLI----S--------------------------------------- 291 (623)
T ss_pred ------------------------------cccccc----c---------------------------------------
Confidence 000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 000497 1124 LWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV 1203 (1460)
Q Consensus 1124 ~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~ 1203 (1460)
. .. ... ..
T Consensus 292 ----------------------~-----~~-~~~--------------------------------------------~~ 299 (623)
T PRK10261 292 ----------------------L-----EH-PAK--------------------------------------------QE 299 (623)
T ss_pred ----------------------c-----cc-ccc--------------------------------------------cC
Confidence 0 00 000 00
Q ss_pred cccccccCCCCCCCCCCCccEEEEEEEEEecCC---------CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhcc
Q 000497 1204 PQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL 1274 (1460)
Q Consensus 1204 ~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl 1274 (1460)
+.+.. ...+ +....++++|++++|+.. ...+|+||||+|++||++||+|+||||||||+++|.|+
T Consensus 300 ~~~~~---~~~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl 373 (623)
T PRK10261 300 PPIEQ---DTVV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRL 373 (623)
T ss_pred ccccc---cccc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcC
Confidence 00000 0000 012259999999999621 13699999999999999999999999999999999999
Q ss_pred CCCCCceEEECCEeCCCCChH---HHhcccEEEeCCCc--cCCc-cHHHhcCcC----CCCChHHHHHHHHHhcHHHHHH
Q 000497 1275 TPICGGQILVDGLNIINTPVR---DLRGRFAVVPQSPF--LFEG-SLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVE 1344 (1460)
Q Consensus 1275 ~~~~~G~I~IDG~di~~i~~~---~lR~~i~iVpQdp~--lf~g-TIR~NLdp~----~~~sd~ei~~aL~~~~l~~~i~ 1344 (1460)
++|++|+|.++|.++...+.. .+|++++||||+|. +++. |+++|+... +....++.. ....+.++
T Consensus 374 ~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~L~ 448 (623)
T PRK10261 374 VESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAA-----ARVAWLLE 448 (623)
T ss_pred CCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHH-----HHHHHHHH
Confidence 999999999999999877643 46788999999983 6654 999998531 111111111 11233444
Q ss_pred hCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh
Q 000497 1345 AVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL 1421 (1460)
Q Consensus 1345 ~lgLd-t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~ 1421 (1460)
.+|++ .........||||||||++|||||+.+|+|||||||||+||..+.+.+.+.|++.. .+.|||+|||+++.+.
T Consensus 449 ~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~ 528 (623)
T PRK10261 449 RVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVE 528 (623)
T ss_pred HcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH
Confidence 45775 34556667899999999999999999999999999999999999999999998764 3789999999999987
Q ss_pred h-cCEEEEEeCCeEEEEcChhHHhccCCcHHH-HHHH
Q 000497 1422 N-MDEILILDHGHLVEQGNPQTLLQDECSVFS-SFVR 1456 (1460)
Q Consensus 1422 ~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~-~l~~ 1456 (1460)
. ||||++|++|+|+|.|+++++..++...|. .++.
T Consensus 529 ~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~ 565 (623)
T PRK10261 529 RISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMA 565 (623)
T ss_pred HhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHh
Confidence 6 899999999999999999999877654453 3443
No 49
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=9.4e-64 Score=639.04 Aligned_cols=532 Identities=18% Similarity=0.221 Sum_probs=415.3
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 273 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLD--GYVLAIALGLTSILKSFFDTQYSFHLSKLKLK 350 (1460)
Q Consensus 273 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~--g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (1460)
..++.+++.++...++.++..++..+.|+++..++|.+..+.+... ...+++++++..++..++.....+...+.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (592)
T PRK10790 16 AYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVG 95 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667777778888899999999999999999997654222111 12223334445556666777777888889999
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHH-HH--HHHhHHHHHHHH
Q 000497 351 LRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALY-LL--YTQVKFAFVSGL 426 (1460)
Q Consensus 351 ~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~pl~i~i~~~-lL--~~~lg~a~l~g~ 426 (1460)
+...+...+|+|.++.+...+.+.+.|+++|.++.|++.+.+.... +..+....+.+++++. ++ .+.+++..+++
T Consensus 96 ~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~- 174 (592)
T PRK10790 96 VVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMI- 174 (592)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999998888899999999999999999875443 3333333333333222 22 22333332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000497 427 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC- 505 (1460)
Q Consensus 427 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~- 505 (1460)
+++.+.+..+..++..+..++..+..++..+...|.++|+++||.|+.|+.+.+++.+..++..+...+........
T Consensus 175 --~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (592)
T PRK10790 175 --FPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLL 252 (592)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223344555566677777777888888899999999999999999999998888876655444433332222211
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchh
Q 000497 506 ---VFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 582 (1460)
Q Consensus 506 ---~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~ 582 (1460)
..+......+..++. +.+ +..+.++.+.+++++.++..+..|+..++..+..+.++..+.+||.++++.++.++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~-~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 330 (592)
T PRK10790 253 RPLLSLFSALILCGLLML-FGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG 330 (592)
T ss_pred HHHHHHHHHHHHHHHHHH-HHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC
Confidence 111111111111222 223 456789999999999999999999999999999999999999999999975432111
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCc
Q 000497 583 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 662 (1460)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~ 662 (1460)
.. .. ......++++|++|+|+.+ +++|+|+||++++||.++|+|+||||||||+++|+|++
T Consensus 331 ~~---~~-----------~~~~~~i~~~~v~f~y~~~-----~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~ 391 (592)
T PRK10790 331 ND---DR-----------PLQSGRIDIDNVSFAYRDD-----NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYY 391 (592)
T ss_pred CC---cc-----------CCCCCeEEEEEEEEEeCCC-----CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhccc
Confidence 00 00 1123469999999999732 23599999999999999999999999999999999999
Q ss_pred cCCCeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCccccc
Q 000497 663 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIG 729 (1460)
Q Consensus 663 ~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg 729 (1460)
+|++|+|.++| .|+||||+|++|++||||||.++++.++++..+++++++++++++.+|+|++|.+|
T Consensus 392 ~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~ 471 (592)
T PRK10790 392 PLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLG 471 (592)
T ss_pred CCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhcccccccccc
Confidence 99999999987 49999999999999999999999988999999999999999999999999999999
Q ss_pred CCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeC
Q 000497 730 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 809 (1460)
Q Consensus 730 ~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~ 809 (1460)
|+|.+||||||||++||||++++|+|+|||||||+||+++++.+.+. +.. ..+++|+|+||||++.++.||+|++|++
T Consensus 472 e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~-l~~-~~~~~tvIivtHr~~~l~~~D~ii~l~~ 549 (592)
T PRK10790 472 EQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQA-LAA-VREHTTLVVIAHRLSTIVEADTILVLHR 549 (592)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999887 433 4467999999999999999999999999
Q ss_pred CeEEEecCHHHHHhccccCcc
Q 000497 810 GQVKWIGSSADLAVSLYSGFW 830 (1460)
Q Consensus 810 G~i~~~g~~~~l~~~~~~~~~ 830 (1460)
|++++.|+++|+++..+.+..
T Consensus 550 G~i~~~G~~~~L~~~~~~y~~ 570 (592)
T PRK10790 550 GQAVEQGTHQQLLAAQGRYWQ 570 (592)
T ss_pred CEEEEEcCHHHHHhCCCHHHH
Confidence 999999999999876655443
No 50
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=8e-64 Score=631.77 Aligned_cols=504 Identities=20% Similarity=0.185 Sum_probs=391.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 273 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 352 (1460)
Q Consensus 273 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r 352 (1460)
.+.+.+++.++...++.++..++..+.|++++.++|.+.........+.+.++++++.++..++.....+...+.+.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (529)
T TIGR02868 6 PLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSL 85 (529)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677777788888899999999999999999876542221111111222223445566666666777788899999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHH
Q 000497 353 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYL---LYTQVKFAFVSGLAI 428 (1460)
Q Consensus 353 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~pl~i~i~~~l---L~~~lg~a~l~g~~v 428 (1460)
..++..+|+|.++++...+.+.++|++++.++.|++++.+.... +..+....+.+++++.+ +.+.+++.+++++
T Consensus 86 ~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~-- 163 (529)
T TIGR02868 86 GRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGL-- 163 (529)
T ss_pred HHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH--
Confidence 99999999999999999999999999999999999999876543 34444444433333332 2333333333222
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 429 TILLIPVN-KWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 507 (1460)
Q Consensus 429 ~~~~~~~~-~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 507 (1460)
+++.++. .+..+..++..++..+..++..+...|.++|+++||.+++|+.+.+++++..++..+...+.....+....
T Consensus 164 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (529)
T TIGR02868 164 -LLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAA 242 (529)
T ss_pred -HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222 23333345566777788899999999999999999999999999999988776666665555555544433
Q ss_pred HHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhh
Q 000497 508 FWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 585 (1460)
Q Consensus 508 ~~~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~ 585 (1460)
+...... .+.++.+|.|.+.++.++++.+.+.+.+...+..|+..++..+..+.++.++.+|+.++++.++..+....
T Consensus 243 ~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~ 322 (529)
T TIGR02868 243 AQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVV 322 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCC
Confidence 3322222 23345667787888899999999999999999999999999999999999999999999976543211000
Q ss_pred hcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000497 586 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 665 (1460)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~ 665 (1460)
..+. ........|+++|++|+|+++ + ++|+|+||++++||.++||||||||||||+++|+|+++|+
T Consensus 323 --~~~~-------~~~~~~~~I~~~~vsf~Y~~~--~---~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~ 388 (529)
T TIGR02868 323 --PAAG-------ALGLGKPTLELRDLSFGYPGS--P---PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPL 388 (529)
T ss_pred --CCCc-------ccCCCCceEEEEEEEEecCCC--C---ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 0000 001123469999999999743 2 3599999999999999999999999999999999999999
Q ss_pred CeEEEEeC------------cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000497 666 HGSIHASG------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKG 732 (1460)
Q Consensus 666 ~G~i~~~~------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g 732 (1460)
+|+|.++| .||||||+|++|++||||||.+|.+ .+++++.++++.|+++++++.+|+|++|.+||+|
T Consensus 389 ~G~I~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 468 (529)
T TIGR02868 389 QGEVTLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGG 468 (529)
T ss_pred CcEEEECCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhcccc
Confidence 99999998 7999999999999999999999864 6889999999999999999999999999999999
Q ss_pred CccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCc
Q 000497 733 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNV 795 (1460)
Q Consensus 733 ~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~ 795 (1460)
.+||||||||++||||++++|+|+|||||||+||+++++.|.+.+ .. ..+++|+|+||||+
T Consensus 469 ~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l-~~-~~~~~TvIiItHrl 529 (529)
T TIGR02868 469 ARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDL-LA-ALSGKTVVVITHHL 529 (529)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HH-hcCCCEEEEEecCC
Confidence 999999999999999999999999999999999999999999884 33 56789999999985
No 51
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.1e-63 Score=637.64 Aligned_cols=541 Identities=18% Similarity=0.218 Sum_probs=425.6
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 270 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 349 (1460)
Q Consensus 270 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (1460)
.++.+++.+++.++...++.++..++.++.|++++.++|.+-.+.+......+++.++++.++..++...+.+...+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (576)
T TIGR02204 8 ALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGE 87 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566777788888888999999999999999999974322222222223333444445555666667788889999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHHH
Q 000497 350 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVA-LYLLYTQVKFAFVSGLA 427 (1460)
Q Consensus 350 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~-~~lL~~~lg~a~l~g~~ 427 (1460)
++...+...+|+|.++.+.....+.+.|++.+.++.|++.+.+... .+..++...+.++++ +++++....++.++.+
T Consensus 88 ~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~- 166 (576)
T TIGR02204 88 RVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLL- 166 (576)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-
Confidence 9999999999999999999888888899999999999999987643 344444444333333 2333333332222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 428 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 507 (1460)
Q Consensus 428 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 507 (1460)
.+++.+.+..++.+++++..+++++..++..+...|.++|+++||.+++|+.+.+++++..++..+...+......+...
T Consensus 167 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (576)
T TIGR02204 167 AVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTA 246 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223334456778888889999999999999999999999999999999998888887766555554444433333222
Q ss_pred HHHHH--HHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhh
Q 000497 508 FWATT--PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 585 (1460)
Q Consensus 508 ~~~~~--~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~ 585 (1460)
+.... ...+.++.+|+|.+.++.+|++.++++..+...+..|+..++..+..+.+++.+++||.++++.++..+....
T Consensus 247 ~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~ 326 (576)
T TIGR02204 247 IVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAH 326 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCC
Confidence 22111 2233455677888888899999999999999999999999999999999999999999999976532111000
Q ss_pred hcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000497 586 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 665 (1460)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~ 665 (1460)
. ...+ .+....++++|++|+|+.+++ +++|+|+||+++|||.++|+|+||||||||+++|+|+++|.
T Consensus 327 ~-~~~~---------~~~~~~i~~~~v~f~y~~~~~---~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~ 393 (576)
T TIGR02204 327 P-KTLP---------VPLRGEIEFEQVNFAYPARPD---QPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQ 393 (576)
T ss_pred C-ccCC---------cCCCceEEEEEEEEECCCCCC---CccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC
Confidence 0 0000 012346999999999975322 34599999999999999999999999999999999999999
Q ss_pred CeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000497 666 HGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 731 (1460)
Q Consensus 666 ~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~ 731 (1460)
+|+|.++| .++||||+|++|++||||||.++.+ .++++..++++.+++.++++.+|+|++|.+||+
T Consensus 394 ~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~ 473 (576)
T TIGR02204 394 SGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGER 473 (576)
T ss_pred CCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCC
Confidence 99999987 5999999999999999999999875 577889999999999999999999999999999
Q ss_pred CCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000497 732 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 811 (1460)
Q Consensus 732 g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 811 (1460)
|.+||||||||++||||++++|++++||||||+||+++++.+++. +.. ..+++|+|+|||+.+.++.+|+|++|++|+
T Consensus 474 g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~-l~~-~~~~~t~IiitH~~~~~~~~d~vi~l~~g~ 551 (576)
T TIGR02204 474 GVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQA-LET-LMKGRTTLIIAHRLATVLKADRIVVMDQGR 551 (576)
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999988876 443 456899999999999999999999999999
Q ss_pred EEEecCHHHHHhccc
Q 000497 812 VKWIGSSADLAVSLY 826 (1460)
Q Consensus 812 i~~~g~~~~l~~~~~ 826 (1460)
+++.|+++++.++.+
T Consensus 552 ~~~~g~~~~l~~~~~ 566 (576)
T TIGR02204 552 IVAQGTHAELIAKGG 566 (576)
T ss_pred EEeeecHHHHHHcCC
Confidence 999999999876544
No 52
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.2e-63 Score=642.68 Aligned_cols=540 Identities=19% Similarity=0.224 Sum_probs=438.8
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 270 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 349 (1460)
Q Consensus 270 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (1460)
.++..++.+++.+....+..++..++.++.|++++.++|.+-...+....+.++++++++.++..++.....+...+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 208 (694)
T TIGR01846 129 WFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTS 208 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666777888888899999999999999999999987543333344455566666677788888888889999999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000497 350 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAW-SLPFQIGVALYLLYTQVKFAFVSGLA 427 (1460)
Q Consensus 350 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~-~~pl~i~i~~~lL~~~lg~a~l~g~~ 427 (1460)
++...+...+|+|.++++...+++.++|++++.+ .|++.+.+... .+..+. ..++-++. +.+++..-++.+++.++
T Consensus 209 ~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l~ 286 (694)
T TIGR01846 209 RIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVF-LAVMFFYSPTLTGVVIG 286 (694)
T ss_pred HHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 59999987643 333333 33333333 32333322223333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 428 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 507 (1460)
Q Consensus 428 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 507 (1460)
++++...+..++.+++++..++.++..+++.+.+.|.++|+++||.+|.|+.+.+++.+..++..+...+..........
T Consensus 287 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (694)
T TIGR01846 287 SLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQ 366 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555667777888888889999999999999999999999999999999988888766666665555555444433
Q ss_pred HHHHHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhh
Q 000497 508 FWATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 585 (1460)
Q Consensus 508 ~~~~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~ 585 (1460)
+..... ..+.++++|+|.+.++.+|.|.++++..+...+..|+..+...+..+.+++++++|+.++++.++..+.. .
T Consensus 367 ~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~-~ 445 (694)
T TIGR01846 367 AIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA-G 445 (694)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC-C
Confidence 332222 2234567888888888999999999999999999999999999999999999999999999765432110 0
Q ss_pred hcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000497 586 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 665 (1460)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~ 665 (1460)
... .+..+..|+++|++|+|++++ +++|+|+||++++|+.++|+|+||||||||+++|+|+++|+
T Consensus 446 ---~~~--------~~~~~~~i~~~~vsf~y~~~~----~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~ 510 (694)
T TIGR01846 446 ---LAA--------LPELRGAITFENIRFRYAPDS----PEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQ 510 (694)
T ss_pred ---CCC--------CCCCCCeEEEEEEEEEcCCCC----ccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 000 012235799999999997432 23599999999999999999999999999999999999999
Q ss_pred CeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCC-CCChHHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000497 666 HGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 731 (1460)
Q Consensus 666 ~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~ 731 (1460)
+|+|.++| .|+||+|+|++|++||+|||.++. ..++++..++++.++++++++.+|+|.+|.+|++
T Consensus 511 ~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 511 HGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred CceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 99999987 489999999999999999999976 4678899999999999999999999999999999
Q ss_pred CCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000497 732 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 811 (1460)
Q Consensus 732 g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 811 (1460)
|.+||||||||++||||++++|+|+|||||||+||+++++.+.+. +.. ..+++|+|++||+++.++.||+|++|++|+
T Consensus 591 g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~-~~~~~t~i~itH~~~~~~~~d~ii~l~~G~ 668 (694)
T TIGR01846 591 GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRN-MRE-ICRGRTVIIIAHRLSTVRACDRIIVLEKGQ 668 (694)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHH-HHH-HhCCCEEEEEeCChHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999887 333 456899999999999999999999999999
Q ss_pred EEEecCHHHHHhccccCc
Q 000497 812 VKWIGSSADLAVSLYSGF 829 (1460)
Q Consensus 812 i~~~g~~~~l~~~~~~~~ 829 (1460)
++++|+++++++..+.+.
T Consensus 669 i~~~g~~~~l~~~~~~y~ 686 (694)
T TIGR01846 669 IAESGRHEELLALQGLYA 686 (694)
T ss_pred EEEeCCHHHHHHcCChHH
Confidence 999999999987665443
No 53
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1e-62 Score=624.61 Aligned_cols=534 Identities=19% Similarity=0.214 Sum_probs=416.6
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 274 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSG---HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 349 (1460)
Q Consensus 274 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~---~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (1460)
+++.+++.++...++.++..++..+.|.+++.+++... .+.. .......+++++++.++..++.....+...+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATF 89 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777888888899999999999999999999642 2211 0111112333444556677777777788889999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHH--HHhHHHHHHH
Q 000497 350 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVAL-YLLY--TQVKFAFVSG 425 (1460)
Q Consensus 350 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~-~lL~--~~lg~a~l~g 425 (1460)
++...+...+|+|.++++...+++.++|++++.++.|++.+..+.. .+..+....+.+++++ ++++ +.+++.++++
T Consensus 90 ~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~ 169 (574)
T PRK11160 90 RVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGI 169 (574)
T ss_pred HHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998889999999999999999998654 3444444444443332 2333 3333333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 426 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 505 (1460)
Q Consensus 426 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 505 (1460)
+ .++...+..++.++.++..++..+..++..+.+.|.++|+++||.|+.|+.+.+++++..++-.+...+.....+..
T Consensus 170 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (574)
T PRK11160 170 L--LLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLS 247 (574)
T ss_pred H--HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22222233455677778888888999999999999999999999999999988888877655555544444444333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchh
Q 000497 506 VFFWATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSL-ISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 582 (1460)
Q Consensus 506 ~~~~~~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l-~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~ 582 (1460)
..+..... ..+.++.+|.+.+ ++.++++..++++.+..++ ..|+..++..+..+.++.++.+||.++++.++..+.
T Consensus 248 ~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~ 326 (574)
T PRK11160 248 QALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTF 326 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 22222111 2233455666664 6778999988877765443 468888999999999999999999999976532110
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCc
Q 000497 583 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 662 (1460)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~ 662 (1460)
... .+. ......++++|++|+|++++ +++|+|+||++++||.++|+||||||||||+++|+|++
T Consensus 327 ~~~---~~~---------~~~~~~i~~~~v~f~y~~~~----~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~ 390 (574)
T PRK11160 327 PTT---STA---------AADQVSLTLNNVSFTYPDQP----QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAW 390 (574)
T ss_pred Ccc---cCC---------CCCCCeEEEEEEEEECCCCC----CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 000 000 11235699999999996431 24599999999999999999999999999999999999
Q ss_pred cCCCeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccc
Q 000497 663 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYI 728 (1460)
Q Consensus 663 ~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~v 728 (1460)
+|++|+|.++| .|+||+|+|++|++||+|||.++.+ .++++..++++.++++++++. |+|++|.+
T Consensus 391 ~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~v 469 (574)
T PRK11160 391 DPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWL 469 (574)
T ss_pred CCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchh
Confidence 99999999987 4999999999999999999999875 688899999999999999999 99999999
Q ss_pred cCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEe
Q 000497 729 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMD 808 (1460)
Q Consensus 729 g~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~ 808 (1460)
||+|.+||||||||++||||++++|++++||||||+||+++++.+.+. +.. ..+++|+|+||||++.++.||+|++|+
T Consensus 470 ge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~-l~~-~~~~~tviiitHr~~~~~~~d~i~~l~ 547 (574)
T PRK11160 470 GEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILEL-LAE-HAQNKTVLMITHRLTGLEQFDRICVMD 547 (574)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecChhHHHhCCEEEEEe
Confidence 999999999999999999999999999999999999999999999887 433 456899999999999999999999999
Q ss_pred CCeEEEecCHHHHHhccccCc
Q 000497 809 KGQVKWIGSSADLAVSLYSGF 829 (1460)
Q Consensus 809 ~G~i~~~g~~~~l~~~~~~~~ 829 (1460)
+|++++.|+++|++++.+.+.
T Consensus 548 ~G~i~~~g~~~~l~~~~g~y~ 568 (574)
T PRK11160 548 NGQIIEQGTHQELLAQQGRYY 568 (574)
T ss_pred CCeEEEeCCHHHHHhcCcHHH
Confidence 999999999999987765443
No 54
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3.8e-65 Score=641.83 Aligned_cols=455 Identities=25% Similarity=0.342 Sum_probs=344.9
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEeC-------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------- 673 (1460)
.++++|+++.|+... ...++|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~--~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~ 82 (529)
T PRK15134 5 LLAIENLSVAFRQQQ--TVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHAS 82 (529)
T ss_pred eEEEeceEEEecCCC--CceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCC
Confidence 478999999986321 112469999999999999999999999999999999999986 799998754
Q ss_pred ----------cEEEEcCCCC--CCC-ccHHHHHccCC----CCC----hHHHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000497 674 ----------SIAYVPQVPW--ILS-GTIRDNILFGK----NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKG 732 (1460)
Q Consensus 674 ----------~i~y~~Q~p~--l~~-~ti~~nI~~g~----~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g 732 (1460)
.+||++|+|. ++. .|+++|+.++. ..+ .++..++++.+++.+.. .......
T Consensus 83 ~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~~~~ 154 (529)
T PRK15134 83 EQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLTDYP 154 (529)
T ss_pred HHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhhCC
Confidence 3899999985 443 49999986421 122 23445566666664210 0123455
Q ss_pred CccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCC
Q 000497 733 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKG 810 (1460)
Q Consensus 733 ~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G 810 (1460)
.+|||||||||+||||++.+|+++||||||++||+...+++.+. +..... .++|+|+|||+++.+. .||+|++|++|
T Consensus 155 ~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G 233 (529)
T PRK15134 155 HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQL-LRELQQELNMGLLFITHNLSIVRKLADRVAVMQNG 233 (529)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHH-HHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECC
Confidence 68999999999999999999999999999999999999988875 322112 3789999999999886 49999999999
Q ss_pred eEEEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHH
Q 000497 811 QVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVY 890 (1460)
Q Consensus 811 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 890 (1460)
++++.|+++++.... . . .
T Consensus 234 ~i~~~g~~~~~~~~~--------------------------------------------~------------~--~---- 251 (529)
T PRK15134 234 RCVEQNRAATLFSAP--------------------------------------------T------------H--P---- 251 (529)
T ss_pred EEEEeCCHHHHhhCC--------------------------------------------C------------C--H----
Confidence 999888765542100 0 0 0
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 891 KNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLR 970 (1460)
Q Consensus 891 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 970 (1460)
+.+ .+
T Consensus 252 --~~~-----------------------------------------------------------------~~-------- 256 (529)
T PRK15134 252 --YTQ-----------------------------------------------------------------KL-------- 256 (529)
T ss_pred --HHH-----------------------------------------------------------------HH--------
Confidence 000 00
Q ss_pred HHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHH
Q 000497 971 AAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFW 1050 (1460)
Q Consensus 971 ~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~ 1050 (1460)
T Consensus 257 -------------------------------------------------------------------------------- 256 (529)
T PRK15134 257 -------------------------------------------------------------------------------- 256 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1051 FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRL 1130 (1460)
Q Consensus 1051 ~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l 1130 (1460)
+ . .
T Consensus 257 ---------~-~---------~---------------------------------------------------------- 259 (529)
T PRK15134 257 ---------L-N---------S---------------------------------------------------------- 259 (529)
T ss_pred ---------H-H---------h----------------------------------------------------------
Confidence 0 0 0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccc
Q 000497 1131 QLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCG 1210 (1460)
Q Consensus 1131 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~ 1210 (1460)
. .. .++..
T Consensus 260 ---------------------~--~~----------------------------------------------~~~~~--- 267 (529)
T PRK15134 260 ---------------------E--PS----------------------------------------------GDPVP--- 267 (529)
T ss_pred ---------------------C--cc----------------------------------------------ccccc---
Confidence 0 00 00000
Q ss_pred CCCCCCCCCCCccEEEEEEEEEecC---------CCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCce
Q 000497 1211 YQSLSPDWPFQGLIEFQNVTMRYKP---------SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQ 1281 (1460)
Q Consensus 1211 ~~~~~~~wp~~g~I~f~nvs~~Y~~---------~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~ 1281 (1460)
..++ ....|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ ++|+
T Consensus 268 -~~~~----~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~ 341 (529)
T PRK15134 268 -LPEP----ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN-SQGE 341 (529)
T ss_pred -cCCC----CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcE
Confidence 0000 0114899999999952 12469999999999999999999999999999999999995 8999
Q ss_pred EEECCEeCCCCChHH---HhcccEEEeCCC--ccCCc-cHHHhcCcCC-----CCChHHHHHHHHHhcHHHHHHhCCCc-
Q 000497 1282 ILVDGLNIINTPVRD---LRGRFAVVPQSP--FLFEG-SLRDNLDPFH-----MNDDLKIWSVLEKCHVKEEVEAVGLE- 1349 (1460)
Q Consensus 1282 I~IDG~di~~i~~~~---lR~~i~iVpQdp--~lf~g-TIR~NLdp~~-----~~sd~ei~~aL~~~~l~~~i~~lgLd- 1349 (1460)
|.+||.++...+... +|++++||||+| .+|+. |+++|+.... ..+..+. +..+.+.++.+|++
T Consensus 342 i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~ 416 (529)
T PRK15134 342 IWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQR-----EQQVIAVMEEVGLDP 416 (529)
T ss_pred EEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHH-----HHHHHHHHHHcCCCH
Confidence 999999998776543 477899999998 36664 9999996421 0111111 11233445555775
Q ss_pred hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEE
Q 000497 1350 TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEI 1426 (1460)
Q Consensus 1350 t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI 1426 (1460)
........+||||||||++||||++.+|+||||||||++||..+.+.+.+.|++.. .++|||+|||+++.+.. ||||
T Consensus 417 ~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i 496 (529)
T PRK15134 417 ETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQV 496 (529)
T ss_pred HHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeE
Confidence 34566677899999999999999999999999999999999999999999998764 27899999999999876 8999
Q ss_pred EEEeCCeEEEEcChhHHhccCC
Q 000497 1427 LILDHGHLVEQGNPQTLLQDEC 1448 (1460)
Q Consensus 1427 lVl~~G~IvE~G~p~eLl~~~~ 1448 (1460)
++|++|++++.|+++++++++.
T Consensus 497 ~~l~~G~i~~~~~~~~~~~~~~ 518 (529)
T PRK15134 497 IVLRQGEVVEQGDCERVFAAPQ 518 (529)
T ss_pred EEEECCEEEEEcCHHHHhcCCC
Confidence 9999999999999999987653
No 55
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.2e-62 Score=621.67 Aligned_cols=520 Identities=19% Similarity=0.224 Sum_probs=415.4
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 277 AYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIM 356 (1460)
Q Consensus 277 ~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~ 356 (1460)
.+++.++...++.++..++..+.|++++.++|.+....+....+.+++.++++.++.+++.....+...+.+.++...+.
T Consensus 3 ~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 82 (544)
T TIGR01842 3 KNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALN 82 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777888889999999999999999999765322223334455556666777788888888889999999999999
Q ss_pred HHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHH--HHHHHHHhHHHHHHHHHHHHHH
Q 000497 357 TIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVA--LYLLYTQVKFAFVSGLAITILL 432 (1460)
Q Consensus 357 ~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~pl~i~i~--~~lL~~~lg~a~l~g~~v~~~~ 432 (1460)
..+|+|.++++... .+...+.++.|++++.+.... +..+...++.++.. ++.+.+.+++.++++++ +.
T Consensus 83 ~~~~~~ll~~~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~---l~ 154 (544)
T TIGR01842 83 QPIFAASFSATLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLLVCFLLHPWIGILALGGAV---VL 154 (544)
T ss_pred HHHHHHHhcCcccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH---HH
Confidence 99999999998732 245667788999999875542 33344444443332 33333344443333322 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 433 IPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATT 512 (1460)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~ 512 (1460)
+.+..+..++.++..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++..++..+...+.....+....+....
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566777788888999999999999999999999999999999999888877666655555444443333322222
Q ss_pred H--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCC
Q 000497 513 P--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSP 590 (1460)
Q Consensus 513 ~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~ 590 (1460)
. ..+.++++|.|.+.++.+|+|.+++++.++..+..|+..+...+..+.++..+.+|+.++++.++..+.. .+
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-----~~ 309 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA-----MP 309 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC-----CC
Confidence 1 2234566888888889999999999999999999999999999999999999999999999764432110 00
Q ss_pred CcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEE
Q 000497 591 SYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIH 670 (1460)
Q Consensus 591 ~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~ 670 (1460)
. +..+..++++|++|+|+..+ +++|+|+||++++|+.++|+||||||||||+++|+|+++|++|+|.
T Consensus 310 ~---------~~~~~~i~~~~v~~~y~~~~----~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~ 376 (544)
T TIGR01842 310 L---------PEPEGHLSVENVTIVPPGGK----KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVR 376 (544)
T ss_pred C---------CCCCCeEEEEEEEEEcCCCC----ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE
Confidence 0 11234699999999996431 2459999999999999999999999999999999999999999999
Q ss_pred EeC-------------cEEEEcCCCCCCCccHHHHHccCC-CCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000497 671 ASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 736 (1460)
Q Consensus 671 ~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LS 736 (1460)
++| .++||||+|++|++|++|||.++. +.+++++.++++.+++++.++.+|+|++|.+|++|.+||
T Consensus 377 ~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LS 456 (544)
T TIGR01842 377 LDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLS 456 (544)
T ss_pred ECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCC
Confidence 986 599999999999999999998655 478889999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEec
Q 000497 737 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 737 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g 816 (1460)
||||||++||||++++|+++|||||||+||+++++.+.+. +.....+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 457 gGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g 535 (544)
T TIGR01842 457 GGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANA-IKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFG 535 (544)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHH-HHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeC
Confidence 9999999999999999999999999999999999998886 333123578999999999999899999999999999999
Q ss_pred CHHHHHh
Q 000497 817 SSADLAV 823 (1460)
Q Consensus 817 ~~~~l~~ 823 (1460)
+++++.+
T Consensus 536 ~~~~l~~ 542 (544)
T TIGR01842 536 ERDEVLA 542 (544)
T ss_pred CHHHHhh
Confidence 9998864
No 56
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.7e-62 Score=626.48 Aligned_cols=533 Identities=19% Similarity=0.212 Sum_probs=413.2
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 274 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRS 353 (1460)
Q Consensus 274 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~ 353 (1460)
.++.++..++..++..++..++.++.|+++..++|.+..+.. .. .+++.++++.++..+......+...+...+++.
T Consensus 13 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (588)
T PRK13657 13 YLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKGD--IF-PLLAAWAGFGLFNIIAGVLVARHADRLAHRRRL 89 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566677778888899999999999999999998765321 11 112222222333333344445566778888888
Q ss_pred HHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHHH
Q 000497 354 SIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVAL---YLLYTQVKFAFVSGLAIT 429 (1460)
Q Consensus 354 ~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~---~lL~~~lg~a~l~g~~v~ 429 (1460)
.+...+|+|.++++...+.+.+.|++++.++.|++.+..... .+..+....+..++.+ +.+.+.+++.++ +++
T Consensus 90 ~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l---~~~ 166 (588)
T PRK13657 90 AVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLV---VLG 166 (588)
T ss_pred HHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 899999999999999988889999999999999999875432 3333333322222222 223333343333 333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 430 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 509 (1460)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 509 (1460)
++...+..++.++..+.+++.++..++..+...|.++|+++||.|+.|+.+.+++.+.-++-.+...+..........+.
T Consensus 167 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (588)
T PRK13657 167 IVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLN 246 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344566777888888889999999999999999999999999999998777766554433333332222222221111
Q ss_pred H--HHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhc
Q 000497 510 A--TTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 587 (1460)
Q Consensus 510 ~--~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~ 587 (1460)
. .....+.++++|+|.+.++.+|++.+++++.++..+..|+..+...+..+..+..+++|+.++++.++..+....
T Consensus 247 ~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~-- 324 (588)
T PRK13657 247 RAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPG-- 324 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCC--
Confidence 1 112234556778888888999999999999999999999999999999999999999999999876432111000
Q ss_pred CCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCe
Q 000497 588 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 667 (1460)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G 667 (1460)
... .......|+++|++|+|+.+ . ++|+|+||++++|+.++|+|+||||||||+++|+|+++|++|
T Consensus 325 -~~~--------~~~~~~~I~~~~vsf~y~~~--~---~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G 390 (588)
T PRK13657 325 -AID--------LGRVKGAVEFDDVSFSYDNS--R---QGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSG 390 (588)
T ss_pred -CCC--------cCCCCCeEEEEEEEEEeCCC--C---ceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCC
Confidence 000 01123469999999999632 2 359999999999999999999999999999999999999999
Q ss_pred EEEEeC-------------cEEEEcCCCCCCCccHHHHHccCC-CCChHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000497 668 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 733 (1460)
Q Consensus 668 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~ 733 (1460)
+|.++| .|+||||+|++|++||||||.+++ +.++++..++++.+++++.++.+|+|.+|.+|++|.
T Consensus 391 ~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~ 470 (588)
T PRK13657 391 RILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGR 470 (588)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCC
Confidence 999987 699999999999999999999996 467888999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000497 734 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 813 (1460)
Q Consensus 734 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 813 (1460)
+||||||||++||||++++|+|++||||||+||+++++.+++.+ .. ..+++|+|+||||++.++.||+|++|++|++.
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l-~~-~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~ 548 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAAL-DE-LMKGRTTFIIAHRLSTVRNADRILVFDNGRVV 548 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HH-HhcCCEEEEEEecHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999998873 33 44689999999999999999999999999999
Q ss_pred EecCHHHHHhccccCcc
Q 000497 814 WIGSSADLAVSLYSGFW 830 (1460)
Q Consensus 814 ~~g~~~~l~~~~~~~~~ 830 (1460)
++|+++++++..+.+.+
T Consensus 549 ~~g~~~~l~~~~~~y~~ 565 (588)
T PRK13657 549 ESGSFDELVARGGRFAA 565 (588)
T ss_pred EeCCHHHHHHCCChHHH
Confidence 99999999866544433
No 57
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-65 Score=638.87 Aligned_cols=443 Identities=23% Similarity=0.320 Sum_probs=339.3
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC--CCeEEEEeC----------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML--THGSIHASG---------- 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~--~~G~i~~~~---------- 673 (1460)
.++++|+++.|.. .++|+|+||++++|++++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~nl~~~~~~------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~ 78 (506)
T PRK13549 5 LLEMKNITKTFGG------VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRD 78 (506)
T ss_pred eEEEeeeEEEeCC------eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHH
Confidence 4889999998852 2359999999999999999999999999999999999986 899999865
Q ss_pred ----cEEEEcCCCCCCCc-cHHHHHccCCC------CChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccH
Q 000497 674 ----SIAYVPQVPWILSG-TIRDNILFGKN------YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 738 (1460)
Q Consensus 674 ----~i~y~~Q~p~l~~~-ti~~nI~~g~~------~~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGG 738 (1460)
.++||+|+|.++.. |++|||.++.. .+.+ +..++++..++. ........+||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG 147 (506)
T PRK13549 79 TERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLD-----------INPATPVGNLGLG 147 (506)
T ss_pred HHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCC-----------CCcccchhhCCHH
Confidence 38999999987765 99999998642 1222 223333333332 1234456789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecC
Q 000497 739 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 817 (1460)
Q Consensus 739 QkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 817 (1460)
|||||+||||+..+|+++||||||++||+...+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|+++..|+
T Consensus 148 qkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 226 (506)
T PRK13549 148 QQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDI-IRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRP 226 (506)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecc
Confidence 99999999999999999999999999999999988875 33212347899999999999865 99999999999987665
Q ss_pred HHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHHHHHhhhh
Q 000497 818 SADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFS 897 (1460)
Q Consensus 818 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~ 897 (1460)
.+++.. . . ... .+
T Consensus 227 ~~~~~~-----------------------------------------------------~-~------~~~---~~---- 239 (506)
T PRK13549 227 AAGMTE-----------------------------------------------------D-D------IIT---MM---- 239 (506)
T ss_pred cccCCH-----------------------------------------------------H-H------HHH---Hh----
Confidence 322100 0 0 000 00
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 898 GWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 977 (1460)
Q Consensus 898 g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~ 977 (1460)
..
T Consensus 240 -----------------------------~~------------------------------------------------- 241 (506)
T PRK13549 240 -----------------------------VG------------------------------------------------- 241 (506)
T ss_pred -----------------------------hC-------------------------------------------------
Confidence 00
Q ss_pred HHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 978 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQ 1057 (1460)
Q Consensus 978 ~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~ 1057 (1460)
.+
T Consensus 242 --------~~---------------------------------------------------------------------- 243 (506)
T PRK13549 242 --------RE---------------------------------------------------------------------- 243 (506)
T ss_pred --------cC----------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1058 FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFI 1137 (1460)
Q Consensus 1058 ~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~ 1137 (1460)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCC
Q 000497 1138 ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPD 1217 (1460)
Q Consensus 1138 ~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~ 1217 (1460)
.. . . .+.+. ++
T Consensus 244 -----------------~~---~---------------------------------------~--~~~~~------~~-- 254 (506)
T PRK13549 244 -----------------LT---A---------------------------------------L--YPREP------HT-- 254 (506)
T ss_pred -----------------cc---c---------------------------------------c--ccccc------cC--
Confidence 00 0 0 00000 00
Q ss_pred CCCCccEEEEEEEEEecC-CCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-CCCceEEECCEeCCCCCh-
Q 000497 1218 WPFQGLIEFQNVTMRYKP-SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-ICGGQILVDGLNIINTPV- 1294 (1460)
Q Consensus 1218 wp~~g~I~f~nvs~~Y~~-~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-~~~G~I~IDG~di~~i~~- 1294 (1460)
+....|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.|+...+.
T Consensus 255 -~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~ 333 (506)
T PRK13549 255 -IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQ 333 (506)
T ss_pred -CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHH
Confidence 01125899999999952 23469999999999999999999999999999999999998 599999999999875543
Q ss_pred HHHhcccEEEeCCC---ccCC-ccHHHhcCcCC--CC------ChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCCh
Q 000497 1295 RDLRGRFAVVPQSP---FLFE-GSLRDNLDPFH--MN------DDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSV 1361 (1460)
Q Consensus 1295 ~~lR~~i~iVpQdp---~lf~-gTIR~NLdp~~--~~------sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSg 1361 (1460)
+..|++++|+||+| .+|+ .|+.+|+.... .. +..+ .+....+.++.+|++. ........|||
T Consensus 334 ~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~~LSg 408 (506)
T PRK13549 334 QAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAA-----ELKTILESIQRLKVKTASPELAIARLSG 408 (506)
T ss_pred HHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHH-----HHHHHHHHHHhcCccCCCcccccccCCH
Confidence 45677899999997 3565 59999996421 11 1111 1122344555557753 45566678999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcC
Q 000497 1362 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1439 (1460)
Q Consensus 1362 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~ 1439 (1460)
|||||++||||++++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|+++..|+
T Consensus 409 G~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~ 488 (506)
T PRK13549 409 GNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKGDLI 488 (506)
T ss_pred HHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999999999998753 48999999999999876 89999999999999999
Q ss_pred hhHHh
Q 000497 1440 PQTLL 1444 (1460)
Q Consensus 1440 p~eLl 1444 (1460)
++++.
T Consensus 489 ~~~~~ 493 (506)
T PRK13549 489 NHNLT 493 (506)
T ss_pred cccCC
Confidence 98874
No 58
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.1e-63 Score=678.89 Aligned_cols=247 Identities=22% Similarity=0.294 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHHHHHhh--cCcccccccC--CCCCCCCCCCc--cEEEEEEEEEec--CCCCccceeeEEEEeCCcEEE
Q 000497 1184 FTETEKEMVSLERVLEYM--DVPQEELCGY--QSLSPDWPFQG--LIEFQNVTMRYK--PSLPAALHDINFTIEGGTQVG 1255 (1460)
Q Consensus 1184 ~~~~e~~~~sveRi~~~~--~~~~E~~~~~--~~~~~~wp~~g--~I~f~nvs~~Y~--~~~~~vL~~isl~I~~Gekvg 1255 (1460)
..+.|..+.++||..++. +.++|..... ..++. .+| .++++|++++|+ ++.+++|+|||++|+|||++|
T Consensus 717 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 793 (1394)
T TIGR00956 717 GETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEK---ESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTA 793 (1394)
T ss_pred ccccccccccccccccCCCCccccccccccccccccc---cCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEE
Confidence 345666778899988763 3333321111 11111 134 479999999995 334579999999999999999
Q ss_pred EECCCCChHHHHHHHHhccCC---CCCceEEECCEeCCCCChHHHhcccEEEeCCCcc-CCccHHHhcCcCC------CC
Q 000497 1256 IVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL-FEGSLRDNLDPFH------MN 1325 (1460)
Q Consensus 1256 IvGrTGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~l-f~gTIR~NLdp~~------~~ 1325 (1460)
|+||||||||||+++|.|+.+ |++|+|.+||.++. ..+|++++||||++.+ +..|+||||++.. ..
T Consensus 794 I~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~ 869 (1394)
T TIGR00956 794 LMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSV 869 (1394)
T ss_pred EECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCC
Confidence 999999999999999999998 78899999999985 2578999999999765 4569999997421 22
Q ss_pred ChHH----HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC-EEEEeccccCCCHHHHHHHHHH
Q 000497 1326 DDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK-VLCLDECTANVDAQTASILQNA 1400 (1460)
Q Consensus 1326 sd~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~-ILlLDEaTS~lD~~te~~Iq~~ 1400 (1460)
++++ +.++++..++.+ -.|+.+++.|.+||||||||++|||||+++|+ ||+||||||+||..+...+++.
T Consensus 870 ~~~~~~~~v~~~l~~l~L~~-----~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~ 944 (1394)
T TIGR00956 870 SKSEKMEYVEEVIKLLEMES-----YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKL 944 (1394)
T ss_pred CHHHHHHHHHHHHHHcCChh-----hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHH
Confidence 3333 344555554433 25788888888999999999999999999997 9999999999999999999999
Q ss_pred HHHh-cCCcEEEEeccChhhH--hhcCEEEEEeCC-eEEEEcChhH
Q 000497 1401 ISSE-CKGMTVITIAHRISTV--LNMDEILILDHG-HLVEQGNPQT 1442 (1460)
Q Consensus 1401 I~~~-~~~~TvI~IaHrl~ti--~~~DrIlVl~~G-~IvE~G~p~e 1442 (1460)
|++. .+|+|||+++|+++.. ..||+|++|++| +++++|++.+
T Consensus 945 L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 945 MRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 9887 4689999999999974 568999999997 9999999854
No 59
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.1e-62 Score=621.74 Aligned_cols=522 Identities=20% Similarity=0.237 Sum_probs=412.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000497 289 KVVNDSIGFAGPLLLNKLIKFLQQGS-GHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVR 367 (1460)
Q Consensus 289 ~l~~~~~~~~~P~ll~~li~~~~~~~-~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~ 367 (1460)
.++..++..+.|++++.++|.+.... .....+.+++.++++.++..++.....+...+.+.++...+...+|+|.++++
T Consensus 4 ~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~ 83 (569)
T PRK10789 4 LIIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQH 83 (569)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34556777889999999999875422 22223334444555566667777666777788899999999999999999999
Q ss_pred ccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 368 LAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKF-AFVSGLAITILLIPVNKWIANLIAN 445 (1460)
Q Consensus 368 ~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~pl~i~i~~~lL~~~lg~-a~l~g~~v~~~~~~~~~~~~~~~~~ 445 (1460)
...+.+.++|++++.+++|++.+.... ..+..++..++.+++++++++..++| .+++.++++++...+..++.+++.+
T Consensus 84 ~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 84 PEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888899999999999999998654 34555565555544443333222333 2222333333334455666777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q 000497 446 ATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP--TLFSLFTFGL 523 (1460)
Q Consensus 446 ~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~--~~~~~~~f~~ 523 (1460)
..++..+..++..+.+.|.++|+++||.+++|+.+.+++.+..++..+...+.....+....+..... ..+.++.+|.
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999998887776554433433333333332222221111 2233456777
Q ss_pred HHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCccCCCC
Q 000497 524 FALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSK 603 (1460)
Q Consensus 524 ~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (1460)
|.+.++.+|+|.+++++.+...+..|+..+++.+..+.+++++.+||.++++.++..+... .+. +..
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~----~~~---------~~~ 310 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS----EPV---------PEG 310 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC----CCC---------CCC
Confidence 8888899999999999999999999999999999999999999999999997653211000 000 112
Q ss_pred CceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC----------
Q 000497 604 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 673 (1460)
Q Consensus 604 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 673 (1460)
+..++++|++|+|+..+ +++|+|+||++++|+.++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 311 ~~~I~~~~v~~~y~~~~----~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~ 386 (569)
T PRK10789 311 RGELDVNIRQFTYPQTD----HPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDS 386 (569)
T ss_pred CCcEEEEEEEEECCCCC----CccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHH
Confidence 34689999999997431 2459999999999999999999999999999999999999999999986
Q ss_pred ---cEEEEcCCCCCCCccHHHHHccCC-CCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHH
Q 000497 674 ---SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 749 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARal 749 (1460)
.++||+|+|++|++|++|||.++. +.+++++.++++.+++++++..+|+|++|.+|++|.+||||||||++||||+
T Consensus 387 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARal 466 (569)
T PRK10789 387 WRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARAL 466 (569)
T ss_pred HHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHH
Confidence 489999999999999999999985 4788899999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhccccCc
Q 000497 750 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGF 829 (1460)
Q Consensus 750 y~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~ 829 (1460)
+++|+++|||||||+||+++++.+.+. +.. ..+++|+|++||+++.++.||+|++|++|+++++|+++++.++.+.+.
T Consensus 467 l~~~~illlDEpts~LD~~~~~~i~~~-l~~-~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~ 544 (569)
T PRK10789 467 LLNAEILILDDALSAVDGRTEHQILHN-LRQ-WGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYR 544 (569)
T ss_pred hcCCCEEEEECccccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHH
Confidence 999999999999999999999999887 433 456899999999999999999999999999999999999987655443
No 60
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=8.3e-65 Score=637.96 Aligned_cols=437 Identities=22% Similarity=0.360 Sum_probs=336.2
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCc--cCCCeEEEEe------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM--MLTHGSIHAS------------ 672 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~--~~~~G~i~~~------------ 672 (1460)
++++|++++|.. +++|+|+||++++|++++|+||||||||||+++|+|.. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~ 74 (520)
T TIGR03269 1 IEVKNLTKKFDG------KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVER 74 (520)
T ss_pred CEEEEEEEEECC------eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccc
Confidence 357888988742 23599999999999999999999999999999999996 7999999875
Q ss_pred -----------C-----------------------cEEEEcCC-CCCCC-ccHHHHHccCC---CCCh----HHHHHHHH
Q 000497 673 -----------G-----------------------SIAYVPQV-PWILS-GTIRDNILFGK---NYDP----QSYSETLK 709 (1460)
Q Consensus 673 -----------~-----------------------~i~y~~Q~-p~l~~-~ti~~nI~~g~---~~~~----~~~~~v~~ 709 (1460)
| .++|++|+ +.+++ .|++||+.++. .++. ++..++++
T Consensus 75 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (520)
T TIGR03269 75 PSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIE 154 (520)
T ss_pred ccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 1 28999997 56665 59999998742 1222 34555666
Q ss_pred HhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceE
Q 000497 710 ACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTR 788 (1460)
Q Consensus 710 ~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ 788 (1460)
.++++... .....+|||||||||+||||+..+|+++||||||++||+.+.+++.+. +..... .++|+
T Consensus 155 ~~gl~~~~-----------~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tv 222 (520)
T TIGR03269 155 MVQLSHRI-----------THIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA-LEEAVKASGISM 222 (520)
T ss_pred HcCChhhh-----------hcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH-HHHHHHhcCcEE
Confidence 66665332 234568999999999999999999999999999999999999998775 322112 37899
Q ss_pred EEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCC
Q 000497 789 ILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSV 867 (1460)
Q Consensus 789 ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 867 (1460)
|+|||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 223 iivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~------------------------------------------- 259 (520)
T TIGR03269 223 VLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV------------------------------------------- 259 (520)
T ss_pred EEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH-------------------------------------------
Confidence 999999999864 999999999998866543321000
Q ss_pred CcchhhHHHHHHHhcccchhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHH
Q 000497 868 SDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLC 947 (1460)
Q Consensus 868 ~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~ 947 (1460)
|. .
T Consensus 260 -------------------------~~---------------------------------~------------------- 262 (520)
T TIGR03269 260 -------------------------FM---------------------------------E------------------- 262 (520)
T ss_pred -------------------------HH---------------------------------h-------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHh
Q 000497 948 IFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVG 1027 (1460)
Q Consensus 948 ~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~ 1027 (1460)
T Consensus 263 -------------------------------------------------------------------------------- 262 (520)
T TIGR03269 263 -------------------------------------------------------------------------------- 262 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHH
Q 000497 1028 LLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKE 1107 (1460)
Q Consensus 1028 ~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~ 1107 (1460)
...
T Consensus 263 --------------------------------------~~~--------------------------------------- 265 (520)
T TIGR03269 263 --------------------------------------GVS--------------------------------------- 265 (520)
T ss_pred --------------------------------------hch---------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1108 HVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTET 1187 (1460)
Q Consensus 1108 ~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~ 1187 (1460)
. .
T Consensus 266 --------------------------------------------~----------------------------------~ 267 (520)
T TIGR03269 266 --------------------------------------------E----------------------------------V 267 (520)
T ss_pred --------------------------------------------h----------------------------------h
Confidence 0 0
Q ss_pred HHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEEEEEEEEecC---CCCccceeeEEEEeCCcEEEEECCCCChH
Q 000497 1188 EKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKP---SLPAALHDINFTIEGGTQVGIVGRTGAGK 1264 (1460)
Q Consensus 1188 e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~---~~~~vL~~isl~I~~GekvgIvGrTGSGK 1264 (1460)
+. .++. + +....++++|++++|+. +..++|+|+||+|++||++||+|+|||||
T Consensus 268 ~~-------------~~~~-------~----~~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGK 323 (520)
T TIGR03269 268 EK-------------ECEV-------E----VGEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGK 323 (520)
T ss_pred cc-------------cccc-------C----CCCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCH
Confidence 00 0000 0 01125999999999953 23469999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCceEEEC-CE---eCCCCC---hHHHhcccEEEeCCCccCCc-cHHHhcCcC-C-CCChHHHHHHH
Q 000497 1265 SSILNALFRLTPICGGQILVD-GL---NIINTP---VRDLRGRFAVVPQSPFLFEG-SLRDNLDPF-H-MNDDLKIWSVL 1334 (1460)
Q Consensus 1265 STLl~~L~rl~~~~~G~I~ID-G~---di~~i~---~~~lR~~i~iVpQdp~lf~g-TIR~NLdp~-~-~~sd~ei~~aL 1334 (1460)
|||+++|.|+++|++|+|.++ |. ++...+ ...+|++++|+||++.+|+. |+++|+... . ....++.
T Consensus 324 STLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~---- 399 (520)
T TIGR03269 324 TTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELA---- 399 (520)
T ss_pred HHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHH----
Confidence 999999999999999999996 64 344333 23567789999999988875 999999531 1 1111110
Q ss_pred HHhcHHHHHHhCCCch-----hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CC
Q 000497 1335 EKCHVKEEVEAVGLET-----FVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KG 1407 (1460)
Q Consensus 1335 ~~~~l~~~i~~lgLdt-----~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~ 1407 (1460)
+....+.++.+|++. ........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .+
T Consensus 400 -~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g 478 (520)
T TIGR03269 400 -RMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEME 478 (520)
T ss_pred -HHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC
Confidence 112234445556643 3455666899999999999999999999999999999999999999999998764 27
Q ss_pred cEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1408 MTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1408 ~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
.|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 479 ~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 479 QTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred cEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 899999999999876 89999999999999999998864
No 61
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-64 Score=633.69 Aligned_cols=446 Identities=21% Similarity=0.321 Sum_probs=337.2
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|.. +.+|+|+||++++||+++|+||||||||||+++|+|..+|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 78 (510)
T PRK09700 5 YISMAGIGKSFGP------VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAA 78 (510)
T ss_pred eEEEeeeEEEcCC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHH
Confidence 4789999998852 2359999999999999999999999999999999999999999999875
Q ss_pred --cEEEEcCCCCCCCc-cHHHHHccCCC-----C-----Ch----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000497 674 --SIAYVPQVPWILSG-TIRDNILFGKN-----Y-----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 736 (1460)
Q Consensus 674 --~i~y~~Q~p~l~~~-ti~~nI~~g~~-----~-----~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LS 736 (1460)
.++|++|++.++.. |++||+.++.. + +. ++..++++.+++.. .......+||
T Consensus 79 ~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS 147 (510)
T PRK09700 79 QLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKV-----------DLDEKVANLS 147 (510)
T ss_pred HCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCC-----------CcccchhhCC
Confidence 38999999987765 99999987531 0 11 12333444444432 1234556899
Q ss_pred cHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEe
Q 000497 737 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 815 (1460)
Q Consensus 737 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 815 (1460)
|||||||+||||++.+|+++||||||++||+.+.+.+.+.+ .....+|+|+|++||+++.+.. ||+|++|++|+++..
T Consensus 148 gG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l-~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~ 226 (510)
T PRK09700 148 ISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIM-NQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCS 226 (510)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHH-HHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeee
Confidence 99999999999999999999999999999999999888763 2212347899999999999874 999999999999877
Q ss_pred cCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHHHHHhh
Q 000497 816 GSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAK 895 (1460)
Q Consensus 816 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~ 895 (1460)
|+++++... +.. ....+
T Consensus 227 g~~~~~~~~------------------------------------------------~~~---~~~~~------------ 243 (510)
T PRK09700 227 GMVSDVSND------------------------------------------------DIV---RLMVG------------ 243 (510)
T ss_pred cchhhCCHH------------------------------------------------HHH---HHhcC------------
Confidence 765432100 000 00000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 896 FSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKV 975 (1460)
Q Consensus 896 ~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 975 (1460)
.
T Consensus 244 ------------------------------------~------------------------------------------- 244 (510)
T PRK09700 244 ------------------------------------R------------------------------------------- 244 (510)
T ss_pred ------------------------------------C-------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000497 976 HNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSK 1055 (1460)
Q Consensus 976 h~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~ 1055 (1460)
+ +
T Consensus 245 -----------~-------------------~------------------------------------------------ 246 (510)
T PRK09700 245 -----------E-------------------L------------------------------------------------ 246 (510)
T ss_pred -----------C-------------------c------------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1056 LQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAA 1135 (1460)
Q Consensus 1056 i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~ 1135 (1460)
. .
T Consensus 247 ------------~-----~------------------------------------------------------------- 248 (510)
T PRK09700 247 ------------Q-----N------------------------------------------------------------- 248 (510)
T ss_pred ------------c-----c-------------------------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCC
Q 000497 1136 FIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLS 1215 (1460)
Q Consensus 1136 ~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~ 1215 (1460)
.. .. ..+. ..++
T Consensus 249 ----------------~~-~~----------------------------------------------~~~~-----~~~~ 260 (510)
T PRK09700 249 ----------------RF-NA----------------------------------------------MKEN-----VSNL 260 (510)
T ss_pred ----------------cc-cc----------------------------------------------cccc-----cccC
Confidence 00 00 0000 0000
Q ss_pred CCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh-
Q 000497 1216 PDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV- 1294 (1460)
Q Consensus 1216 ~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~- 1294 (1460)
+.+..++++|+++.|. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.
T Consensus 261 ---~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~ 333 (510)
T PRK09700 261 ---AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPL 333 (510)
T ss_pred ---CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHH
Confidence 0112599999998763 38999999999999999999999999999999999999999999999999876543
Q ss_pred HHHhcccEEEeCCC---ccCCc-cHHHhcCcCCCCChH------HH-HHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChh
Q 000497 1295 RDLRGRFAVVPQSP---FLFEG-SLRDNLDPFHMNDDL------KI-WSVLEKCHVKEEVEAVGLE-TFVKESGISFSVG 1362 (1460)
Q Consensus 1295 ~~lR~~i~iVpQdp---~lf~g-TIR~NLdp~~~~sd~------ei-~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgG 1362 (1460)
..+|++++|+||++ .+|++ |+++|+......... .. ...-++....+.++.+|+. .........||||
T Consensus 334 ~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG 413 (510)
T PRK09700 334 DAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGG 413 (510)
T ss_pred HHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCccccCChH
Confidence 45678999999984 47765 999998653210000 00 0000112234455556775 4456666789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcCh
Q 000497 1363 QRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1440 (1460)
Q Consensus 1363 QrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1440 (1460)
||||++|||||+++|+||||||||++||..+.+.+.+.|++.. ++.|||+|||+++.+.. ||||++|++|++++.+++
T Consensus 414 q~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~ 493 (510)
T PRK09700 414 NQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTN 493 (510)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEecC
Confidence 9999999999999999999999999999999999999998753 48899999999998865 899999999999998877
Q ss_pred hH
Q 000497 1441 QT 1442 (1460)
Q Consensus 1441 ~e 1442 (1460)
.+
T Consensus 494 ~~ 495 (510)
T PRK09700 494 RD 495 (510)
T ss_pred cc
Confidence 33
No 62
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.5e-62 Score=620.56 Aligned_cols=510 Identities=16% Similarity=0.155 Sum_probs=380.9
Q ss_pred HHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 000497 908 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 987 (1460)
Q Consensus 908 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p 987 (1460)
+.++...+....++.++.+.+.... ... ..+..++++.++..++.++..+.....+.+...+++.++++++++.|
T Consensus 26 ~~~~~~~~~~~~~~~i~~~i~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~ 100 (555)
T TIGR01194 26 LGLAGGLAIIALLASINNAIHEENF--LGQ---GSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGAP 100 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCc--ccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3444445555566666666543110 001 11222334445556667777788888899999999999999999999
Q ss_pred cccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 988 VLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSREL 1067 (1460)
Q Consensus 988 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~l 1067 (1460)
+.||++.++|++++|+++|++.+++.+.. +..++..++.+++.++++++.+|.+.++++..+.+...+..+..+..++.
T Consensus 101 ~~~~~~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~ 179 (555)
T TIGR01194 101 IEEIDRRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKF 179 (555)
T ss_pred HHHHHhcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987653 55566666666666777777777665554433333222222222222222
Q ss_pred HHHHHhhcchhHhHHHHhhcChHHHHhcCcHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1068 RRLDSVSRSPIYASFTETLNGSSTIRAFKSED--YFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1145 (1460)
Q Consensus 1068 ~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~--~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 1145 (1460)
.+......+.+.+.+.|.+.|+++||+|+.++ ...+++.+..++..+................+++..+.+ ++..
T Consensus 180 ~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 256 (555)
T TIGR01194 180 FHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLI---GCAL 256 (555)
T ss_pred HHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH
Confidence 33333445678899999999999999999954 556677776666665554332222211111122111111 1111
Q ss_pred HHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc-cc---cC-CCC--CCCC
Q 000497 1146 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE-LC---GY-QSL--SPDW 1218 (1460)
Q Consensus 1146 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~-~~---~~-~~~--~~~w 1218 (1460)
+++. . .+..+.|.+...+.|+..+..++..+...+.++++...|.+|+.++.+.+.++ .. .. ... .+..
T Consensus 257 ~~~~--~--~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 332 (555)
T TIGR01194 257 FAAA--M--FASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHD 332 (555)
T ss_pred HHHH--H--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccC
Confidence 1111 0 12346778888888888899999999999999999999999999997632221 10 00 000 0111
Q ss_pred CCCccEEEEEEEEEecCC---CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChH
Q 000497 1219 PFQGLIEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1295 (1460)
Q Consensus 1219 p~~g~I~f~nvs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~ 1295 (1460)
+..+.|+|+||+|+|++. .+++|+|+||+|++||++|||||||||||||+++|.|+++|++|+|.+||+|+.+++.+
T Consensus 333 ~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~ 412 (555)
T TIGR01194 333 KSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRD 412 (555)
T ss_pred CCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHH
Confidence 234789999999999753 23699999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAL 1373 (1460)
++|+++++|||||++|++|+|+|+.+ ..+++++++++++++++++++.+ |+||. .+||||||||++||||+
T Consensus 413 ~~~~~i~~v~q~~~lf~~ti~~n~~~--~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRal 485 (555)
T TIGR01194 413 DYRDLFSAIFADFHLFDDLIGPDEGE--HASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAW 485 (555)
T ss_pred HHHhhCcEEccChhhhhhhhhccccc--chhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999743 46788999999999999999988 99984 58999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHH-h-cCCcEEEEeccChhhHhhcCEEEEEeCCeEEEE
Q 000497 1374 LKSSKVLCLDECTANVDAQTASILQNAISS-E-CKGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1437 (1460)
Q Consensus 1374 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~-~-~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~ 1437 (1460)
+++|+|||||||||+||++|++.+++.+.+ . .+++|+|+||||++++..||+|+||++|+++|.
T Consensus 486 l~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 486 LEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999887643 2 368999999999999999999999999999975
No 63
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=6e-62 Score=618.83 Aligned_cols=528 Identities=23% Similarity=0.283 Sum_probs=417.9
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 278 YGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMT 357 (1460)
Q Consensus 278 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~ 357 (1460)
++ .++...++.++..++....|.++..+++.+.. .......+...+++++++..++.....+...+.+.++...+..
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~ 89 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA--DLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRR 89 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 77778888888999999999999999988762 1222233333444444456666666667777777999999999
Q ss_pred HHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHH
Q 000497 358 IIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWS-LPFQIGVALYLL---YTQVKFAFVSGLAITILLI 433 (1460)
Q Consensus 358 ~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~-~pl~i~i~~~lL---~~~lg~a~l~g~~v~~~~~ 433 (1460)
.+|+|.++++...+++...|++++.++.|++.+............ +++.++..+.++ .+.+++..+.+ .+++.
T Consensus 90 ~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~ 166 (567)
T COG1132 90 DLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLI---LPLLA 166 (567)
T ss_pred HHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH---HHHHH
Confidence 999999999999998888999999999999999987766422222 333333322222 22333333322 22333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH
Q 000497 434 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW--AT 511 (1460)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~--~~ 511 (1460)
....++.++.++..++..+..++..+.+.|.++|+++||.++.|+...++..+..++..+...+............ ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (567)
T COG1132 167 LVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLS 246 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556566788888888899999999999999999999999997766665554433343323222222222111 12
Q ss_pred HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCC
Q 000497 512 TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 591 (1460)
Q Consensus 512 ~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~ 591 (1460)
.-....++.++.+.+..+.+++|.+.+++.++..+..|+..+...+..+..+..+.+|+.++++.++...+... +
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~----~- 321 (567)
T COG1132 247 SLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPD----P- 321 (567)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC----C-
Confidence 22233455667777778889999999999999999999999999999999999999999999987442111000 0
Q ss_pred cccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEE
Q 000497 592 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 671 (1460)
Q Consensus 592 ~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~ 671 (1460)
....+..|+++|++|+|+++ +++|+|+||++++||.++||||+||||||++++|+|+++|++|+|.+
T Consensus 322 --------~~~~~~~I~f~~vsf~y~~~-----~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~i 388 (567)
T COG1132 322 --------LKDTIGSIEFENVSFSYPGK-----KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILI 388 (567)
T ss_pred --------CCCCCCeEEEEEEEEEcCCC-----CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEE
Confidence 01234569999999999752 34599999999999999999999999999999999999999999999
Q ss_pred eC-------------cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000497 672 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 737 (1460)
Q Consensus 672 ~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSG 737 (1460)
+| +||||||+|+||++||+|||.+|++ .++++..++++.+++++.++.+|+|++|.|||+|.+|||
T Consensus 389 dg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSg 468 (567)
T COG1132 389 DGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSG 468 (567)
T ss_pred CCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCH
Confidence 87 5999999999999999999999987 688999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecC
Q 000497 738 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 817 (1460)
Q Consensus 738 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 817 (1460)
|||||++||||++++|+|++||||||+||+++++.|.+.. .. +.++||+|+|+||++.+..||+|++|++|+|++.|+
T Consensus 469 GQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l-~~-l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~ 546 (567)
T COG1132 469 GQRQRLAIARALLRNPPILILDEATSALDTETEALIQDAL-KK-LLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGT 546 (567)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHH-HH-HhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecC
Confidence 9999999999999999999999999999999999998874 32 457789999999999999999999999999999999
Q ss_pred HHHHHhccccCccc
Q 000497 818 SADLAVSLYSGFWS 831 (1460)
Q Consensus 818 ~~~l~~~~~~~~~~ 831 (1460)
|+||+++.+.+.++
T Consensus 547 h~eLl~~~g~y~~l 560 (567)
T COG1132 547 HEELLAKGGLYARL 560 (567)
T ss_pred HHHHHHcCCHHHHH
Confidence 99999876655443
No 64
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=6.5e-63 Score=565.88 Aligned_cols=530 Identities=20% Similarity=0.271 Sum_probs=448.0
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 268 PSLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKL 347 (1460)
Q Consensus 268 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (1460)
.....+.+..++..++..+++..+.+++.+..|+++-++.|.+-.+.+.....++.+....+|+++.+++..+.+...|+
T Consensus 11 ~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Ri 90 (580)
T COG4618 11 KNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRI 90 (580)
T ss_pred CchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667778888888999999999999999999999999999998877777788888888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000497 348 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-----NSFHDAWSLPFQIGVALYLLYTQVKFAF 422 (1460)
Q Consensus 348 ~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-----~~~~~~~~~pl~i~i~~~lL~~~lg~a~ 422 (1460)
+.++...|...||.-+++.+..........+.+ .|.+.+..+. ..+.++.+.|+.+++ +|+++..+|+.+
T Consensus 91 g~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v-~fl~Hp~lG~~a 165 (580)
T COG4618 91 GERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAV-IFLFHPWLGLIA 165 (580)
T ss_pred HHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHH-HHHHHHHHHHHH
Confidence 999999999999999976655433221122222 3556665544 357788888998877 789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 423 VSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLD 502 (1460)
Q Consensus 423 l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~ 502 (1460)
++|.++++.+..+|-.+++ +..++..+..-+|....+..++|..+|+.+|+.+...+++.+.....++...+.....
T Consensus 166 ~~ga~iLv~la~ln~~~t~---~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~ 242 (580)
T COG4618 166 LAGAIILVVLALLNERATR---KPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRN 242 (580)
T ss_pred HHHHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999888888777766665 5567778888899999999999999999999999999999888777676655544433
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 000497 503 AWCVFFWATTPTL--FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYK 580 (1460)
Q Consensus 503 ~~~~~~~~~~~~~--~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~ 580 (1460)
.....+.-..-.+ ..++..|+|++.++++|+|.++++-.+......|+......+.++..|+.|++|++++|......
T Consensus 243 ~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~ 322 (580)
T COG4618 243 GAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAA 322 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 3332222222222 34567888999999999999999999999999999999999999999999999999999653222
Q ss_pred hhhhhhcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhc
Q 000497 581 HELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILG 660 (1460)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g 660 (1460)
.+.. ..+.++..+.++++++.-|.. .+++++|+||++++|+.++||||||||||||.++|.|
T Consensus 323 ~~~m--------------~LP~P~g~L~Ve~l~~~PPg~----~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG 384 (580)
T COG4618 323 AERM--------------PLPAPQGALSVERLTAAPPGQ----KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVG 384 (580)
T ss_pred cCCC--------------CCCCCCceeeEeeeeecCCCC----CCcceecceeEecCCceEEEECCCCccHHHHHHHHHc
Confidence 1111 112456778899999965432 2456999999999999999999999999999999999
Q ss_pred CccCCCeEEEEeC-------------cEEEEcCCCCCCCccHHHHHc-cCCCCChHHHHHHHHHhcchHHHhhccCCCcc
Q 000497 661 EMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNIL-FGKNYDPQSYSETLKACTLDVDISLMVGGDMA 726 (1460)
Q Consensus 661 ~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~-~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t 726 (1460)
..+|.+|.|++|| +|||.||+..||.|||+|||. |+.+.|+++.-++.++.+.++-|..+|+||+|
T Consensus 385 ~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT 464 (580)
T COG4618 385 IWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDT 464 (580)
T ss_pred ccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccC
Confidence 9999999999987 699999999999999999996 88899999999999999999999999999999
Q ss_pred cccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEE
Q 000497 727 YIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVV 806 (1460)
Q Consensus 727 ~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~ 806 (1460)
.||+.|.+|||||||||+||||+|.+|.+++||||.|+||.+-+..+.+. +.....+|.|+|+||||++.+..+|+|.+
T Consensus 465 ~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~A-i~~~k~rG~~vvviaHRPs~L~~~Dkilv 543 (580)
T COG4618 465 RIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAA-ILAAKARGGTVVVIAHRPSALASVDKILV 543 (580)
T ss_pred ccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHH-HHHHHHcCCEEEEEecCHHHHhhcceeee
Confidence 99999999999999999999999999999999999999999988877766 55546778899999999999999999999
Q ss_pred EeCCeEEEecCHHHHHhc
Q 000497 807 MDKGQVKWIGSSADLAVS 824 (1460)
Q Consensus 807 l~~G~i~~~g~~~~l~~~ 824 (1460)
|++|++...|+.+|+.++
T Consensus 544 l~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 544 LQDGRIAAFGPREEVLAK 561 (580)
T ss_pred ecCChHHhcCCHHHHHHH
Confidence 999999999999998765
No 65
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.1e-64 Score=630.87 Aligned_cols=436 Identities=21% Similarity=0.309 Sum_probs=335.5
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|.. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~i~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~ 77 (501)
T PRK10762 4 LLQLKGIDKAFPG------VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQ 77 (501)
T ss_pred eEEEeeeEEEeCC------eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHH
Confidence 4789999998852 2359999999999999999999999999999999999999999999875
Q ss_pred --cEEEEcCCCCCCCc-cHHHHHccCCC-------CChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000497 674 --SIAYVPQVPWILSG-TIRDNILFGKN-------YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 739 (1460)
Q Consensus 674 --~i~y~~Q~p~l~~~-ti~~nI~~g~~-------~~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQ 739 (1460)
.++|++|+|.++.. |++||+.++.. ++.+ +..++++.+++.. .......+|||||
T Consensus 78 ~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~ 146 (501)
T PRK10762 78 EAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRF-----------SSDKLVGELSIGE 146 (501)
T ss_pred hCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCC-----------CccCchhhCCHHH
Confidence 38999999977754 99999998642 1222 2333444444322 1234456899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCH
Q 000497 740 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 818 (1460)
Q Consensus 740 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~ 818 (1460)
|||++||||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|+++..|+.
T Consensus 147 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~ 225 (501)
T PRK10762 147 QQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRV-IRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREV 225 (501)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCc
Confidence 9999999999999999999999999999999988765 32212347899999999999864 999999999999876543
Q ss_pred HHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHHHHHhhhhh
Q 000497 819 ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG 898 (1460)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g 898 (1460)
+++.. ++.
T Consensus 226 ~~~~~-----------------------------------------------------~~~------------------- 233 (501)
T PRK10762 226 ADLTE-----------------------------------------------------DSL------------------- 233 (501)
T ss_pred CcCCH-----------------------------------------------------HHH-------------------
Confidence 22100 000
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 899 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 978 (1460)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ 978 (1460)
...+...
T Consensus 234 ------------------------~~~~~~~------------------------------------------------- 240 (501)
T PRK10762 234 ------------------------IEMMVGR------------------------------------------------- 240 (501)
T ss_pred ------------------------HHHhcCC-------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 979 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1058 (1460)
Q Consensus 979 ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~ 1058 (1460)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1059 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII 1138 (1460)
Q Consensus 1059 ~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~ 1138 (1460)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCC
Q 000497 1139 SFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDW 1218 (1460)
Q Consensus 1139 ~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~w 1218 (1460)
.. . ..++.. ..+
T Consensus 241 -------------~~-~----------------------------------------------~~~~~~-----~~~--- 252 (501)
T PRK10762 241 -------------KL-E----------------------------------------------DQYPRL-----DKA--- 252 (501)
T ss_pred -------------Cc-c----------------------------------------------cccccc-----ccC---
Confidence 00 0 000000 000
Q ss_pred CCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh-HHH
Q 000497 1219 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDL 1297 (1460)
Q Consensus 1219 p~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~l 1297 (1460)
|..-.|+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+
T Consensus 253 ~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~ 325 (501)
T PRK10762 253 PGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGL 325 (501)
T ss_pred CCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHH
Confidence 0112588999974 37999999999999999999999999999999999999999999999999987664 456
Q ss_pred hcccEEEeCCC---ccCC-ccHHHhcCcCCC---------CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhH
Q 000497 1298 RGRFAVVPQSP---FLFE-GSLRDNLDPFHM---------NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQ 1363 (1460)
Q Consensus 1298 R~~i~iVpQdp---~lf~-gTIR~NLdp~~~---------~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQ 1363 (1460)
|++++|+||+| .+|. -|+++|+..... .+..+ .+....+.++.+|++ ...+.....|||||
T Consensus 326 ~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~~LSgGe 400 (501)
T PRK10762 326 ANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHAD-----EQQAVSDFIRLFNIKTPSMEQAIGLLSGGN 400 (501)
T ss_pred HCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHH-----HHHHHHHHHHhcCCCCCCccCchhhCCHHH
Confidence 78899999997 3555 599999964210 11111 111234455555774 34566677899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChh
Q 000497 1364 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQ 1441 (1460)
Q Consensus 1364 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~ 1441 (1460)
|||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+++
T Consensus 401 kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~ 480 (501)
T PRK10762 401 QQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEFTRE 480 (501)
T ss_pred HHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEeccc
Confidence 999999999999999999999999999999999999998864 47899999999999875 7999999999999999988
Q ss_pred HHh
Q 000497 1442 TLL 1444 (1460)
Q Consensus 1442 eLl 1444 (1460)
++.
T Consensus 481 ~~~ 483 (501)
T PRK10762 481 QAT 483 (501)
T ss_pred cCC
Confidence 764
No 66
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.2e-62 Score=670.71 Aligned_cols=548 Identities=19% Similarity=0.204 Sum_probs=391.9
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 887 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 966 (1460)
Q Consensus 887 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 966 (1460)
.+..+..++..++..+... +..++..++....++.++...+.....+.......|+.++++..++..++.....+....
T Consensus 289 ~~l~~~l~~~~~~~~~~~~-~~~i~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 367 (1495)
T PLN03232 289 PWLLRALNNSLGGRFWLGG-IFKIGHDLSQFVGPVILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGR 367 (1495)
T ss_pred chHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556665555444333 334555666666677776655533211111111112222222222222222212223356
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHH
Q 000497 967 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1046 (1460)
Q Consensus 967 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ 1046 (1460)
.+.+....+...+++++++.|..++++.++|+++||+++|++.+++... .+..+....+.++..++++.....+..++.
T Consensus 368 ~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~~-~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~ 446 (1495)
T PLN03232 368 VGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIAE-QLHGLWSAPFRIIVSMVLLYQQLGVASLFG 446 (1495)
T ss_pred HHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 6777778888899999999999999999999999999999999998753 333333333333332222222111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1047 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1126 (1460)
Q Consensus 1047 ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1126 (1460)
+++++++..+..++.+..+..++.....+....+.+.|.++|+++||+|+||+.+.+++.+..+...+..........+.
T Consensus 447 ~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~ 526 (1495)
T PLN03232 447 SLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFN 526 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112222222223333333333334445557788999999999999999999999999887766655544433333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Q 000497 1127 SLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQE 1206 (1460)
Q Consensus 1127 ~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E 1206 (1460)
........ .++.++.+.+.... .+..++|.+..++++...+..++..+...+..+..+..|.+|+.++++.+++
T Consensus 527 ~~~~~~~~-~~~~~~~fg~~~v~-----~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~ 600 (1495)
T PLN03232 527 SFILNSIP-VVVTLVSFGVFVLL-----GGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEER 600 (1495)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 22111111 11111111111111 2345688888888899999999999999999999999999999999976654
Q ss_pred ccccCCCCCCCCCCCccEEEEEEEEEecCC-CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEEC
Q 000497 1207 ELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD 1285 (1460)
Q Consensus 1207 ~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ID 1285 (1460)
.... .+ +..+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++|.+.
T Consensus 601 ~~~~--~~-~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~-- 675 (1495)
T PLN03232 601 ILAQ--NP-PLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV-- 675 (1495)
T ss_pred cccc--cC-CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE--
Confidence 2111 11 111234679999999999753 46799999999999999999999999999999999999999999773
Q ss_pred CEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhH
Q 000497 1286 GLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1363 (1460)
Q Consensus 1286 G~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQ 1363 (1460)
.+|++++||||+|++|+|||||||.++.++++++++++++.|++.+.++.+ |+||.|||+|.+|||||
T Consensus 676 ----------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQ 745 (1495)
T PLN03232 676 ----------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQ 745 (1495)
T ss_pred ----------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHH
Confidence 368899999999999999999999998888999999999999999999988 99999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHH-HHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhH
Q 000497 1364 RQLICLARALLKSSKVLCLDECTANVDAQTASIL-QNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQT 1442 (1460)
Q Consensus 1364 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I-q~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~e 1442 (1460)
||||+||||++++|+|+|||||||+||++|++.| ++.++...+++|+|+||||++++..||+|++|++|+|+|.|+|+|
T Consensus 746 kQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~e 825 (1495)
T PLN03232 746 KQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAE 825 (1495)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHH
Confidence 9999999999999999999999999999999976 556777778999999999999999999999999999999999999
Q ss_pred HhccCCcHHHHHHHhh
Q 000497 1443 LLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1443 Ll~~~~~~f~~l~~~~ 1458 (1460)
|+++ ++.|+++++..
T Consensus 826 L~~~-~~~~~~l~~~~ 840 (1495)
T PLN03232 826 LSKS-GSLFKKLMENA 840 (1495)
T ss_pred HHhc-chhHHHHHHhc
Confidence 9985 46899988754
No 67
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.4e-61 Score=611.44 Aligned_cols=507 Identities=21% Similarity=0.211 Sum_probs=400.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 279 GYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMT 357 (1460)
Q Consensus 279 ~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~ 357 (1460)
++.++..+++.++..++..+.|++++.++|.+. ++........+++.++++.++..++.....+...+++.++...+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 2 RRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677788889999999999999999999874 3222223334455555666777788888888889999999999999
Q ss_pred HHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHHHHHHH
Q 000497 358 IIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYL---LYTQVKFAFVSGLAITILLI 433 (1460)
Q Consensus 358 ~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~l---L~~~lg~a~l~g~~v~~~~~ 433 (1460)
.+|+|.++++...+.+.++|++++.++.|++.+.+... .+..+....+.+++++.+ +.+.+++..++++ ++..
T Consensus 82 ~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~---~l~~ 158 (529)
T TIGR02857 82 RLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTA---PLIP 158 (529)
T ss_pred HHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH---HHHH
Confidence 99999999999988899999999999999999987554 345555444444333322 2233333333222 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 434 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP 513 (1460)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~ 513 (1460)
.+..++.++..+..++.++..+++.+.+.|.++|+++||.|++|+.+.+++++.-++..+...+..........+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02857 159 IFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFA 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23345677777888888899999999999999999999999999998888876654444433333333333222222222
Q ss_pred HHH--HHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCC
Q 000497 514 TLF--SLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 591 (1460)
Q Consensus 514 ~~~--~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~ 591 (1460)
.+. .++.++.+.+.++.+|++.+++++.+...+..|+..+...+..+.++.++++|+.++++.++...... ..+
T Consensus 239 ~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~- 314 (529)
T TIGR02857 239 TLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVT- 314 (529)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCC-
Confidence 121 12234445555778999999999999999999999999999999999999999999997442111000 000
Q ss_pred cccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEE
Q 000497 592 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 671 (1460)
Q Consensus 592 ~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~ 671 (1460)
......|+++|++|+|+..+ +++|+|+||++++|+.++|+||+|||||||+++|+|+++|++|+|.+
T Consensus 315 ---------~~~~~~i~~~~v~f~y~~~~----~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~ 381 (529)
T TIGR02857 315 ---------AAPAPSLEFSGLSVAYPGRR----APALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAV 381 (529)
T ss_pred ---------CCCCCeEEEEEEEEECCCCC----cccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 01224699999999997431 24599999999999999999999999999999999999999999999
Q ss_pred eC-------------cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000497 672 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 737 (1460)
Q Consensus 672 ~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSG 737 (1460)
+| .++||+|+|++|++||||||.++.+ .++++..++++.++++++++.+|+|++|.+||+|.+|||
T Consensus 382 ~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSg 461 (529)
T TIGR02857 382 NGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSG 461 (529)
T ss_pred CCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCH
Confidence 87 4999999999999999999999864 678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEE
Q 000497 738 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVM 807 (1460)
Q Consensus 738 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l 807 (1460)
|||||++||||++++|++++||||||+||+++++.+.+. +.. ..+++|+|+||||++.++.||+|++|
T Consensus 462 Gq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~-l~~-~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 462 GQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEA-LRA-LAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999999999999887 444 45789999999999999999999875
No 68
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.1e-61 Score=653.38 Aligned_cols=220 Identities=22% Similarity=0.322 Sum_probs=187.5
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcc
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1300 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1300 (1460)
...|+++|++++|+....++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++.+ +....|++
T Consensus 1935 ~~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 34699999999997533579999999999999999999999999999999999999999999999999965 45677899
Q ss_pred cEEEeCCCccCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1301 FAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1301 i~iVpQdp~lf~g-TIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
|||+||++.+++. |+||||..+. ..+++++.+. ..+.++.+||+...+.....||||||||+++||||+.+
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~-----v~~lLe~lgL~~~~dk~~~~LSGGqKqRLslA~ALi~~ 2088 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKV-----ANWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGC 2088 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcCCHHHhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999998875 9999996532 1222222211 22344445666555666678999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
|+||+|||||++||+.+.+.+++.|++.. +|+|||++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 2089 P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2089 PPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 99999999999999999999999998753 58999999999999976 899999999999999999999654
No 69
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=8.6e-62 Score=666.58 Aligned_cols=546 Identities=18% Similarity=0.196 Sum_probs=387.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 888 TVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFG 967 (1460)
Q Consensus 888 ~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~ 967 (1460)
+..+..++..++..+.. ++..++..++....++.++..++.............++.++++..++..++..-..+.....
T Consensus 290 ~l~~~l~~~~~~~~~~~-~~~~i~~~~~~~~~P~ll~~li~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (1622)
T PLN03130 290 WLLRALNNSLGGRFWLG-GFFKIGNDLSQFVGPLLLNLLLESMQNGEPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRV 368 (1622)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555443332 23444555566666666665554322111111111111111111111111111111223456
Q ss_pred HHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHH
Q 000497 968 SLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLV 1047 (1460)
Q Consensus 968 ~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~i 1047 (1460)
+.+....+...+++++++.|..++++.++|+++|++++|++.+++.... +..++...+.++..++++.....+..++.+
T Consensus 369 ~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~~-l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~ 447 (1622)
T PLN03130 369 GFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQQ-LHTLWSAPFRIIIAMVLLYQQLGVASLIGS 447 (1622)
T ss_pred HHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777778888999999999999999999999999999999999987643 333333333333333332222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1048 PFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLS 1127 (1460)
Q Consensus 1048 p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~ 1127 (1460)
+++++...++.++.+..+..++.....+....+.+.|.++|+++||+|+||+.|.+++.+..+...+..........+..
T Consensus 448 ~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~ 527 (1622)
T PLN03130 448 LMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNS 527 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222333333333334444444556667889999999999999999999999998776664443333222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q 000497 1128 LRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1207 (1460)
Q Consensus 1128 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~ 1207 (1460)
....... +++.++.+...... .+..++|.+..++++...+..++..+...+..+..+.+|.+|+.++++.+++.
T Consensus 528 ~~~~~~~-~~v~~~~fg~~~~~-----~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~ 601 (1622)
T PLN03130 528 FILNSIP-VLVTVVSFGVFTLL-----GGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERV 601 (1622)
T ss_pred HHHHHHH-HHHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 1111111 11111111111111 23457888888888888888889999999999999999999999999765432
Q ss_pred cccCCCCCCCCCCCccEEEEEEEEEecCC-CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCC-ceEEEC
Q 000497 1208 LCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG-GQILVD 1285 (1460)
Q Consensus 1208 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~-G~I~ID 1285 (1460)
... . ++ .-+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++ |+|.+
T Consensus 602 ~~~-~-~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l- 677 (1622)
T PLN03130 602 LLP-N-PP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI- 677 (1622)
T ss_pred ccc-C-Cc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE-
Confidence 111 1 11 11224579999999999753 3579999999999999999999999999999999999999999 99974
Q ss_pred CEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhH
Q 000497 1286 GLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1363 (1460)
Q Consensus 1286 G~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQ 1363 (1460)
|++++||||+|++|+|||||||.++.++++++++++++.|+|.++++.+ |++|.+||+|.+|||||
T Consensus 678 ------------~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQ 745 (1622)
T PLN03130 678 ------------RGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQ 745 (1622)
T ss_pred ------------cCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHH
Confidence 7799999999999999999999999889999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHH-HHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhH
Q 000497 1364 RQLICLARALLKSSKVLCLDECTANVDAQTASIL-QNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQT 1442 (1460)
Q Consensus 1364 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I-q~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~e 1442 (1460)
||||+||||++++|+|+|||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|++|++|+|+|.|+|+|
T Consensus 746 KQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~e 825 (1622)
T PLN03130 746 KQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEE 825 (1622)
T ss_pred HHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHH
Confidence 9999999999999999999999999999999866 677877778999999999999999999999999999999999999
Q ss_pred HhccCCcHHHHHHHhh
Q 000497 1443 LLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1443 Ll~~~~~~f~~l~~~~ 1458 (1460)
|+++ ++.|+++++..
T Consensus 826 L~~~-~~~~~~l~~~~ 840 (1622)
T PLN03130 826 LSNN-GPLFQKLMENA 840 (1622)
T ss_pred HHhc-chhHHHHHHhc
Confidence 9975 46899988754
No 70
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=6.8e-64 Score=626.60 Aligned_cols=451 Identities=22% Similarity=0.362 Sum_probs=344.2
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|+++.|.. +.+|+|+||++++|++++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 10 ~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 83 (510)
T PRK15439 10 PLLCARSISKQYSG------VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKA 83 (510)
T ss_pred ceEEEEeEEEEeCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHH
Confidence 35899999999852 2359999999999999999999999999999999999999999999876
Q ss_pred ---cEEEEcCCCCCCCc-cHHHHHccCCCCC---hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000497 674 ---SIAYVPQVPWILSG-TIRDNILFGKNYD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 746 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~~---~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 746 (1460)
.+||++|++.++.. |++||+.++.... +++..++++..++... ......+|||||||||+||
T Consensus 84 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la 152 (510)
T PRK15439 84 HQLGIYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLD-----------LDSSAGSLEVADRQIVEIL 152 (510)
T ss_pred HhCCEEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCcc-----------ccCChhhCCHHHHHHHHHH
Confidence 38999999987765 9999999875322 2345556666655422 2344568999999999999
Q ss_pred HHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHhcc
Q 000497 747 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVSL 825 (1460)
Q Consensus 747 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~~~ 825 (1460)
||++.+|+++||||||++||+...+++.+. +.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 153 ~aL~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (510)
T PRK15439 153 RGLMRDSRILILDEPTASLTPAETERLFSR-IRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD 231 (510)
T ss_pred HHHHcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH
Confidence 999999999999999999999999988876 33212347899999999998864 9999999999999888765532100
Q ss_pred ccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHHHHHhhhhhHHHHHHH
Q 000497 826 YSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITLVI 905 (1460)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~ 905 (1460)
.. .. +.
T Consensus 232 ------------------------------------------------~~---~~------------~~----------- 237 (510)
T PRK15439 232 ------------------------------------------------II---QA------------IT----------- 237 (510)
T ss_pred ------------------------------------------------HH---HH------------Hh-----------
Confidence 00 00 00
Q ss_pred HHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000497 906 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 985 (1460)
Q Consensus 906 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 985 (1460)
.. . ..
T Consensus 238 ----------------------~~---~-~~------------------------------------------------- 242 (510)
T PRK15439 238 ----------------------PA---A-RE------------------------------------------------- 242 (510)
T ss_pred ----------------------Cc---c-cc-------------------------------------------------
Confidence 00 0 00
Q ss_pred CccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 986 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1065 (1460)
Q Consensus 986 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr 1065 (1460)
.
T Consensus 243 -------------------------------------------------------------------------------~ 243 (510)
T PRK15439 243 -------------------------------------------------------------------------------K 243 (510)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred HHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1066 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1145 (1460)
Q Consensus 1066 ~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 1145 (1460)
+.+.. .
T Consensus 244 ~~~~~------------------------------------------~-------------------------------- 249 (510)
T PRK15439 244 SLSAS------------------------------------------Q-------------------------------- 249 (510)
T ss_pred ccccc------------------------------------------c--------------------------------
Confidence 00000 0
Q ss_pred HHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEE
Q 000497 1146 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIE 1225 (1460)
Q Consensus 1146 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~ 1225 (1460)
+. .+ ..|..+. ..+ +.+-.++
T Consensus 250 --------------------------------------------------~~-~~-~~~~~~~----~~~---~~~~~l~ 270 (510)
T PRK15439 250 --------------------------------------------------KL-WL-ELPGNRR----QQA---AGAPVLT 270 (510)
T ss_pred --------------------------------------------------cc-cc-ccccccc----ccC---CCCceEE
Confidence 00 00 0000000 000 0112589
Q ss_pred EEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHH-HhcccEEE
Q 000497 1226 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRFAVV 1304 (1460)
Q Consensus 1226 f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i~iV 1304 (1460)
++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|++++|+
T Consensus 271 ~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v 343 (510)
T PRK15439 271 VEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVYL 343 (510)
T ss_pred EeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEEC
Confidence 999983 2699999999999999999999999999999999999999999999999998776654 46789999
Q ss_pred eCCC---ccCCc-cHHHhcCcC--C---CC-ChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHH
Q 000497 1305 PQSP---FLFEG-SLRDNLDPF--H---MN-DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1305 pQdp---~lf~g-TIR~NLdp~--~---~~-sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARAL 1373 (1460)
||++ -+|+. |+++|+... . .. ...+ ++..+.+.++.+|++ .........||||||||++||||+
T Consensus 344 ~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqrl~la~al 418 (510)
T PRK15439 344 PEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPAR-----ENAVLERYRRALNIKFNHAEQAARTLSGGNQQKVLIAKCL 418 (510)
T ss_pred CCChhhCCccCCCcHHHHHHhhhhhhhccccChHH-----HHHHHHHHHHHcCCCCCCccCccccCCcHHHHHHHHHHHH
Confidence 9996 36654 999998432 1 00 1111 112234555666775 456666778999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1374 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1374 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+.+|+||||||||++||..+.+.+.+.|++.. +++|||+|||+++.+.+ ||||++|++|++++.|+++++..+
T Consensus 419 ~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~~ 493 (510)
T PRK15439 419 EASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAINVD 493 (510)
T ss_pred hhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccCCHH
Confidence 99999999999999999999999999998764 48999999999999976 899999999999999999887643
No 71
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.1e-61 Score=569.38 Aligned_cols=523 Identities=22% Similarity=0.267 Sum_probs=415.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000497 286 GLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLY 365 (1460)
Q Consensus 286 ~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~ 365 (1460)
.++..+..+....|-.++-..++.+-..+.....+.++++++++.++++++.....+..++.+.++|..|+..+++|..+
T Consensus 6 ~ll~~l~~i~~i~qa~llA~~l~~l~~~~~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~ 85 (559)
T COG4988 6 ALLAVLSGIAIIAQAALLADILTKLIEGQLFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAK 85 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555555566666666666666554433344455667778888889999999999999999999999999999999999
Q ss_pred CCccccCCCChhHHHHHHHhhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 366 VRLAERSEFSDGEIQTFMSVDTDRTVNLAN----SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIAN 441 (1460)
Q Consensus 366 l~~~~~~~~~~g~i~nlms~D~~~i~~~~~----~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~ 441 (1460)
++....+..++|++.+++..-++.+..... .....-..|+-+.++++++.+.-|+..++.+..+.++ ...+++
T Consensus 86 ~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlf---Milvg~ 162 (559)
T COG4988 86 LGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLF---MILVGL 162 (559)
T ss_pred CChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH---HHHHHH
Confidence 998888888999999999999998877432 2333445677777777777776665555444433333 344556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 442 LIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWL----MKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFS 517 (1460)
Q Consensus 442 ~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i----~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (1460)
..++..+++++....-.+..-+-|+|+.++|.|+..+...++| ++.|+.-|+.++-.-.-.+..-++.... +...
T Consensus 163 ~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~ls-iAlv 241 (559)
T COG4988 163 AAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLS-IALV 241 (559)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 6667777888888888888999999999999999876555555 4556666666554332223333332222 2222
Q ss_pred HHHHHHHHHhC-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCC
Q 000497 518 LFTFGLFALMG-HQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNG 596 (1460)
Q Consensus 518 ~~~f~~~~~~~-~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~ 596 (1460)
.+.+ .+.+.+ ++++....+.++.+.--+-.|+..+...+..-.++.++.+++..|++.|........ ...
T Consensus 242 Av~~-g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~---~~~----- 312 (559)
T COG4988 242 AVYI-GFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGE---KAE----- 312 (559)
T ss_pred HHHH-HHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcc---ccc-----
Confidence 2233 334455 689999999999999999999999999999999999999999999987754331110 000
Q ss_pred CccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC---
Q 000497 597 LSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--- 673 (1460)
Q Consensus 597 ~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--- 673 (1460)
....+...+..+|.+|.|+..+ ++++|+||++++|++++|||+||||||||+++|+|+++|++|+|.++|
T Consensus 313 --~~~~~~~ei~~~~l~~~y~~g~-----~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l 385 (559)
T COG4988 313 --VANEPPIEISLENLSFRYPDGK-----PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDL 385 (559)
T ss_pred --cccCCCceeeecceEEecCCCC-----cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccc
Confidence 0012234455669999997531 459999999999999999999999999999999999999999999987
Q ss_pred ----------cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 ----------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
+++||||+|.||+|||||||+++++ .+++...++++..+|.+.++. |+|.+|.+||+|.+|||||+||
T Consensus 386 ~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QR 464 (559)
T COG4988 386 RDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQR 464 (559)
T ss_pred cccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHH
Confidence 5999999999999999999999987 668899999999999999998 9999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHH
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 822 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~ 822 (1460)
|+||||+++++++||||||||+||+++++.|.+. +.. +.+++|+|+||||++.+..+|+|++|++|+++++|+|+++.
T Consensus 465 laLARAll~~~~l~llDEpTA~LD~etE~~i~~~-l~~-l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~ 542 (559)
T COG4988 465 LALARALLSPASLLLLDEPTAHLDAETEQIILQA-LQE-LAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELS 542 (559)
T ss_pred HHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHH-HHH-HHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHh
Confidence 9999999999999999999999999999988887 433 67889999999999999999999999999999999999998
Q ss_pred hccccCccc
Q 000497 823 VSLYSGFWS 831 (1460)
Q Consensus 823 ~~~~~~~~~ 831 (1460)
++.+.+.++
T Consensus 543 ~~~~~y~~l 551 (559)
T COG4988 543 EKQGLYANL 551 (559)
T ss_pred hcCcHHHHH
Confidence 877666544
No 72
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.1e-63 Score=625.38 Aligned_cols=447 Identities=22% Similarity=0.300 Sum_probs=333.3
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC--CCeEEEEeC-----------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML--THGSIHASG----------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~--~~G~i~~~~----------- 673 (1460)
++++|+++.|.. +++|+|+||++++|++++|+||||||||||+++|+|+++| ++|+|.++|
T Consensus 2 l~i~~l~~~~~~------~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~ 75 (500)
T TIGR02633 2 LEMKGIVKTFGG------VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDT 75 (500)
T ss_pred EEEEeEEEEeCC------eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHH
Confidence 578899998852 2359999999999999999999999999999999999987 799999875
Q ss_pred ---cEEEEcCCCCCCCc-cHHHHHccCCCC-------ChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccH
Q 000497 674 ---SIAYVPQVPWILSG-TIRDNILFGKNY-------DPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 738 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~-------~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGG 738 (1460)
.++||+|+|.++.. |++||+.++... +.+ +..++++.+++.... + .....+||||
T Consensus 76 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~----~~~~~~LSgG 145 (500)
T TIGR02633 76 ERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN------V----TRPVGDYGGG 145 (500)
T ss_pred HhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc------c----cCchhhCCHH
Confidence 38999999987765 999999886421 211 233344444332110 1 1234589999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecC
Q 000497 739 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 817 (1460)
Q Consensus 739 QkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 817 (1460)
|||||+||||++.+|+++||||||++||+...+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+
T Consensus 146 ~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~ 224 (500)
T TIGR02633 146 QQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDI-IRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKD 224 (500)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecC
Confidence 99999999999999999999999999999999988876 32212357899999999999875 99999999999876543
Q ss_pred HHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHHHHHhhhh
Q 000497 818 SADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFS 897 (1460)
Q Consensus 818 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~ 897 (1460)
.+++. . . . ..
T Consensus 225 ~~~~~------------------------------------------------~-----~--------~--~~------- 234 (500)
T TIGR02633 225 MSTMS------------------------------------------------E-----D--------D--II------- 234 (500)
T ss_pred cccCC------------------------------------------------H-----H--------H--HH-------
Confidence 11000 0 0 0 00
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 898 GWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 977 (1460)
Q Consensus 898 g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~ 977 (1460)
.....
T Consensus 235 --------------------------~~~~~------------------------------------------------- 239 (500)
T TIGR02633 235 --------------------------TMMVG------------------------------------------------- 239 (500)
T ss_pred --------------------------HHHhC-------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 978 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQ 1057 (1460)
Q Consensus 978 ~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~ 1057 (1460)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T TIGR02633 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1058 FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFI 1137 (1460)
Q Consensus 1058 ~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~ 1137 (1460)
+
T Consensus 240 -----------------~-------------------------------------------------------------- 240 (500)
T TIGR02633 240 -----------------R-------------------------------------------------------------- 240 (500)
T ss_pred -----------------c--------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCC
Q 000497 1138 ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPD 1217 (1460)
Q Consensus 1138 ~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~ 1217 (1460)
. .. . ..+.+. .+
T Consensus 241 --------------~--~~---~-----------------------------------------~~~~~~-----~~--- 252 (500)
T TIGR02633 241 --------------E--IT---S-----------------------------------------LYPHEP-----HE--- 252 (500)
T ss_pred --------------c--cc---c-----------------------------------------cccccc-----cC---
Confidence 0 00 0 000000 00
Q ss_pred CCCCccEEEEEEEEEecCC-CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-CCceEEECCEeCCCCC-h
Q 000497 1218 WPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-CGGQILVDGLNIINTP-V 1294 (1460)
Q Consensus 1218 wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-~~G~I~IDG~di~~i~-~ 1294 (1460)
+.+-.++++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+ .
T Consensus 253 -~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~ 331 (500)
T TIGR02633 253 -IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPA 331 (500)
T ss_pred -CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHH
Confidence 011258999999999432 24699999999999999999999999999999999999995 8999999999986544 3
Q ss_pred HHHhcccEEEeCCC---ccCC-ccHHHhcCcCCC--CCh-HHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHH
Q 000497 1295 RDLRGRFAVVPQSP---FLFE-GSLRDNLDPFHM--NDD-LKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQL 1366 (1460)
Q Consensus 1295 ~~lR~~i~iVpQdp---~lf~-gTIR~NLdp~~~--~sd-~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQr 1366 (1460)
..+|++++++||++ .+|+ .|+++|+..... ... ..+...-.+....+.++.+|+.. ........||||||||
T Consensus 332 ~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGqkqr 411 (500)
T TIGR02633 332 QAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIGRLSGGNQQK 411 (500)
T ss_pred HHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCccccCCHHHHHH
Confidence 56788999999996 3666 499999975310 100 00000111122344555556642 3455556899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHH
Q 000497 1367 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1443 (1460)
Q Consensus 1367 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eL 1443 (1460)
++||||++++|++|||||||++||..+.+.+.+.|++.. ++.|||+|||+++.+.. ||||++|++|+++..++..++
T Consensus 412 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 412 AVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred HHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 999999999999999999999999999999999987753 47899999999999976 799999999999988766554
No 73
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.2e-60 Score=606.45 Aligned_cols=533 Identities=18% Similarity=0.214 Sum_probs=413.2
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 274 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRS 353 (1460)
Q Consensus 274 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~ 353 (1460)
.++.+++.++...++.++..++..+.|++++.++|.+...... ..+++.+++..++..+......+...++..+++.
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSDV---LPTLALWAGFGVFNTIAYVLVAREADRLAHGRRA 89 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566788888888899999999999999999999977542211 1111122222333444444445566778888899
Q ss_pred HHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH-H--HHHHhHHHHHHHHHHH
Q 000497 354 SIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY-L--LYTQVKFAFVSGLAIT 429 (1460)
Q Consensus 354 ~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~-l--L~~~lg~a~l~g~~v~ 429 (1460)
.+...+|+|.++++...+++.++|++++.++.|++.+..... .+..+...++.++++++ + +.+.+++.++ +++
T Consensus 90 ~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l---~~~ 166 (585)
T TIGR01192 90 TLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLM---VLG 166 (585)
T ss_pred HHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 999999999999999999889999999999999999876543 33333444444433222 2 2223333222 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 430 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 509 (1460)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 509 (1460)
++...+..++.+++.+..++..+..++..+.+.|.++|+++||.++.|+.+.+++++..++-.+...+..........+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (585)
T TIGR01192 167 ILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLN 246 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344456677777788888888889999999999999999999999998887777655433333333222222222221
Q ss_pred HHH--HHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhc
Q 000497 510 ATT--PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 587 (1460)
Q Consensus 510 ~~~--~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~ 587 (1460)
... -..+.++.+|.|.+.++.++++.+++++.++..+..|+..+...+..+.++..+.+|+.++++.++..+....
T Consensus 247 ~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-- 324 (585)
T TIGR01192 247 RMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD-- 324 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc--
Confidence 111 1223456678888888899999999999999999999999999999999999999999999975432111000
Q ss_pred CCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCe
Q 000497 588 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 667 (1460)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G 667 (1460)
.+. .+.....++++|++|+|+.+ +++|+|+||++++|+.++|+||||||||||+++|+|+++|++|
T Consensus 325 -~~~--------~~~~~~~i~~~~v~~~y~~~-----~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G 390 (585)
T TIGR01192 325 -APE--------LPNVKGAVEFRHITFEFANS-----SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVG 390 (585)
T ss_pred -CCC--------CCCCCCeEEEEEEEEECCCC-----CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCC
Confidence 000 01123469999999999642 2359999999999999999999999999999999999999999
Q ss_pred EEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000497 668 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 733 (1460)
Q Consensus 668 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~ 733 (1460)
+|.++| .++||+|+|++|++|++|||.++.+ .++++..++++.+++++.+..+|+|++|.+|++|.
T Consensus 391 ~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~ 470 (585)
T TIGR01192 391 QILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGN 470 (585)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCC
Confidence 999876 5899999999999999999999864 57778888999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000497 734 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 813 (1460)
Q Consensus 734 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 813 (1460)
+||||||||++||||++++|+++|||||||+||+++++.+.+. +.. ..+++|+|+|||+++.++.||+|++|++|+++
T Consensus 471 ~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~-l~~-~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~ 548 (585)
T TIGR01192 471 RLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNA-IDA-LRKNRTTFIIAHRLSTVRNADLVLFLDQGRLI 548 (585)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHH-HHH-HhCCCEEEEEEcChHHHHcCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999998876 433 45689999999999999999999999999999
Q ss_pred EecCHHHHHhccccCcc
Q 000497 814 WIGSSADLAVSLYSGFW 830 (1460)
Q Consensus 814 ~~g~~~~l~~~~~~~~~ 830 (1460)
+.|+++++.++.+.+.+
T Consensus 549 ~~g~~~~l~~~~~~y~~ 565 (585)
T TIGR01192 549 EKGSFQELIQKDGRFYK 565 (585)
T ss_pred EECCHHHHHHCCChHHH
Confidence 99999999876655443
No 74
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-62 Score=618.22 Aligned_cols=202 Identities=19% Similarity=0.300 Sum_probs=170.8
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
..|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++| ++++
T Consensus 318 ~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 384 (530)
T PRK15064 318 NALEVENLTKGFDN--GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANI 384 (530)
T ss_pred ceEEEEeeEEeeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEE
Confidence 36999999999964 3599999999999999999999999999999999999999999999987 3579
Q ss_pred EEEeCCCc--cCC-ccHHHhcCcCCC--CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1302 AVVPQSPF--LFE-GSLRDNLDPFHM--NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1302 ~iVpQdp~--lf~-gTIR~NLdp~~~--~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
+|+||++. +++ .|+++|+..+.. ..++++.+.|+.. |+. ........+||||||||++||||+++
T Consensus 385 ~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~~LSgGq~qrv~la~al~~ 455 (530)
T PRK15064 385 GYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRL---------LFSQDDIKKSVKVLSGGEKGRMLFGKLMMQ 455 (530)
T ss_pred EEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHc---------CCChhHhcCcccccCHHHHHHHHHHHHHhc
Confidence 99999984 443 599999864321 1223344444443 553 33455667899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEE-EEcChhHHhccC
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLV-EQGNPQTLLQDE 1447 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~Iv-E~G~p~eLl~~~ 1447 (1460)
+|+||||||||++||+.+.+.+.+.|++. +.|||+|||+++.+.. ||||++|++|+++ +.|+++++++.+
T Consensus 456 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~~ 527 (530)
T PRK15064 456 KPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRSQ 527 (530)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHHh
Confidence 99999999999999999999999999875 4699999999999876 8999999999998 789999987653
No 75
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-63 Score=621.15 Aligned_cols=443 Identities=20% Similarity=0.276 Sum_probs=334.1
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|.. +.+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~ 77 (501)
T PRK11288 4 YLSFDGIGKTFPG------VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAAL 77 (501)
T ss_pred eEEEeeeEEEECC------EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHH
Confidence 4789999998853 2359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCCc-cHHHHHccCCC------CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000497 674 --SIAYVPQVPWILSG-TIRDNILFGKN------YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 740 (1460)
Q Consensus 674 --~i~y~~Q~p~l~~~-ti~~nI~~g~~------~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQk 740 (1460)
.++|++|+|.++.. |++||+.++.. .+. ++..++++.+++... ......+||||||
T Consensus 78 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGq~ 146 (501)
T PRK11288 78 AAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDID-----------PDTPLKYLSIGQR 146 (501)
T ss_pred hCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCC-----------cCCchhhCCHHHH
Confidence 48999999988765 99999998631 122 233444555444311 2345568999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHH
Q 000497 741 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 819 (1460)
Q Consensus 741 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~ 819 (1460)
||++||||+..+|+++||||||++||+.+.+.+.+.+ .....+|+|+|++||+++.+.. ||+|++|++|+++..++..
T Consensus 147 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l-~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 225 (501)
T PRK11288 147 QMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVI-RELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDM 225 (501)
T ss_pred HHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHH-HHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCcc
Confidence 9999999999999999999999999999999888763 2212347899999999998865 9999999999987533200
Q ss_pred HHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHHHHHhhhhhH
Q 000497 820 DLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGW 899 (1460)
Q Consensus 820 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~ 899 (1460)
+ . . . .+. +.
T Consensus 226 ~-------------~---------------------------~-------~------~~~-------------~~----- 234 (501)
T PRK11288 226 A-------------Q---------------------------V-------D------RDQ-------------LV----- 234 (501)
T ss_pred c-------------c---------------------------C-------C------HHH-------------HH-----
Confidence 0 0 0 0 000 00
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 900 FITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTL 979 (1460)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~l 979 (1460)
..+...
T Consensus 235 ------------------------~~~~~~-------------------------------------------------- 240 (501)
T PRK11288 235 ------------------------QAMVGR-------------------------------------------------- 240 (501)
T ss_pred ------------------------HHhcCC--------------------------------------------------
Confidence 000000
Q ss_pred HHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 980 LTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFF 1059 (1460)
Q Consensus 980 l~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~ 1059 (1460)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK11288 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1060 YRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIIS 1139 (1460)
Q Consensus 1060 y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~ 1139 (1460)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK11288 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCC
Q 000497 1140 FIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWP 1219 (1460)
Q Consensus 1140 ~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp 1219 (1460)
. .. +. ...++. + +
T Consensus 241 ------------~--~~---------------------------------------~~---~~~~~~--------~---~ 253 (501)
T PRK11288 241 ------------E--IG---------------------------------------DI---YGYRPR--------P---L 253 (501)
T ss_pred ------------C--cc---------------------------------------cc---cccccc--------C---C
Confidence 0 00 00 000000 0 0
Q ss_pred CCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCC-hHHHh
Q 000497 1220 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDLR 1298 (1460)
Q Consensus 1220 ~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~~lR 1298 (1460)
....++++|++++ .+++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .+..|
T Consensus 254 ~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 327 (501)
T PRK11288 254 GEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIR 327 (501)
T ss_pred CCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHh
Confidence 1125889999742 4899999999999999999999999999999999999999999999999987543 34567
Q ss_pred cccEEEeCCCc---cCC-ccHHHhcCcCCC-C-ChHHH--HHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHH
Q 000497 1299 GRFAVVPQSPF---LFE-GSLRDNLDPFHM-N-DDLKI--WSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICL 1369 (1460)
Q Consensus 1299 ~~i~iVpQdp~---lf~-gTIR~NLdp~~~-~-sd~ei--~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~L 1369 (1460)
++++|+||+|. +|+ .|+.+|+..... . ..... ...-++....+.++.+|++ ........+||||||||++|
T Consensus 328 ~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrl~l 407 (501)
T PRK11288 328 AGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLIMNLSGGNQQKAIL 407 (501)
T ss_pred CCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCccccCCHHHHHHHHH
Confidence 89999999973 554 699999864311 0 00000 0000111233455555773 34555667899999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHh
Q 000497 1370 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1370 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
|||++.+|++|||||||++||..+.+.+.+.|++.. .+.|||+|||+++.+.. ||||++|++|++++.|++++..
T Consensus 408 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 408 GRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred HHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 999999999999999999999999999999997764 48899999999999865 7999999999999999998765
No 76
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-62 Score=614.64 Aligned_cols=435 Identities=22% Similarity=0.312 Sum_probs=328.2
Q ss_pred EcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--------------cE
Q 000497 610 QDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------------SI 675 (1460)
Q Consensus 610 ~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------------~i 675 (1460)
+|+++.|.. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 2 ~nl~~~~~~------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 75 (491)
T PRK10982 2 SNISKSFPG------VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGI 75 (491)
T ss_pred CceEEEeCC------EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 466777642 2359999999999999999999999999999999999999999999876 38
Q ss_pred EEEcCCCCCCC-ccHHHHHccCCC------CChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHH
Q 000497 676 AYVPQVPWILS-GTIRDNILFGKN------YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 744 (1460)
Q Consensus 676 ~y~~Q~p~l~~-~ti~~nI~~g~~------~~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~ 744 (1460)
+|++|++.++. .|++||+.++.. .+.+ +..++++.+++. ........+|||||||||+
T Consensus 76 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgGq~qrv~ 144 (491)
T PRK10982 76 SMVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDID-----------IDPRAKVATLSVSQMQMIE 144 (491)
T ss_pred EEEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCC-----------CCccCchhhCCHHHHHHHH
Confidence 99999998765 599999987631 1222 222333333332 1234456789999999999
Q ss_pred HHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHh
Q 000497 745 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 745 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
||||+..+|+++||||||++||+.+.+++.+. +.....+++|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 145 lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 223 (491)
T PRK10982 145 IAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTI-IRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTM 223 (491)
T ss_pred HHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCH
Confidence 99999999999999999999999999988776 32212357899999999998864 99999999999987665322100
Q ss_pred ccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHHHHHhhhhhHHHHH
Q 000497 824 SLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITL 903 (1460)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~ 903 (1460)
.+. .
T Consensus 224 -----------------------------------------------------~~~-------~---------------- 227 (491)
T PRK10982 224 -----------------------------------------------------DKI-------I---------------- 227 (491)
T ss_pred -----------------------------------------------------HHH-------H----------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 904 VICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 983 (1460)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~v 983 (1460)
..+..
T Consensus 228 --------------------~~~~~------------------------------------------------------- 232 (491)
T PRK10982 228 --------------------AMMVG------------------------------------------------------- 232 (491)
T ss_pred --------------------HHHhC-------------------------------------------------------
Confidence 00000
Q ss_pred hcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 984 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1063 (1460)
Q Consensus 984 l~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~ 1063 (1460)
T Consensus 233 -------------------------------------------------------------------------------- 232 (491)
T PRK10982 233 -------------------------------------------------------------------------------- 232 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1064 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIAT 1143 (1460)
Q Consensus 1064 sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 1143 (1460)
T Consensus 233 -------------------------------------------------------------------------------- 232 (491)
T PRK10982 233 -------------------------------------------------------------------------------- 232 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCcc
Q 000497 1144 MAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGL 1223 (1460)
Q Consensus 1144 ~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~ 1223 (1460)
.. . .+ ..+.+. .+ +.+..
T Consensus 233 -----------~~---~----------------------------------~~-----~~~~~~-----~~----~~~~~ 250 (491)
T PRK10982 233 -----------RS---L----------------------------------TQ-----RFPDKE-----NK----PGEVI 250 (491)
T ss_pred -----------CC---c----------------------------------cc-----cccccc-----CC----CCCcE
Confidence 00 0 00 000000 00 11125
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChH-HHhcccE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR-DLRGRFA 1302 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~-~lR~~i~ 1302 (1460)
|+++|++++| +++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+.. .+|+.++
T Consensus 251 i~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~ 326 (491)
T PRK10982 251 LEVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFA 326 (491)
T ss_pred EEEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCE
Confidence 8999999875 2499999999999999999999999999999999999999999999999999876654 4577899
Q ss_pred EEeCCCc---cCC-ccHHHh-----cCcCCC----CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHH
Q 000497 1303 VVPQSPF---LFE-GSLRDN-----LDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLIC 1368 (1460)
Q Consensus 1303 iVpQdp~---lf~-gTIR~N-----Ldp~~~----~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~ 1368 (1460)
|+||++. +|+ .|+++| +..... .+..+.. ....+.++.+|+. ........+||||||||++
T Consensus 327 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~ 401 (491)
T PRK10982 327 LVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMK-----SDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVI 401 (491)
T ss_pred EcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHH-----HHHHHHHHhcCccCCCcccccccCCcHHHHHHH
Confidence 9999963 565 477766 321111 1111111 1223445555663 2345666789999999999
Q ss_pred HHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHh
Q 000497 1369 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1369 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
||||++++|+||||||||++||..+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|+++..++++++.
T Consensus 402 la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 479 (491)
T PRK10982 402 IGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVDTKTTT 479 (491)
T ss_pred HHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 9999999999999999999999999999999997653 48999999999999875 7999999999999888776544
No 77
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.8e-61 Score=608.51 Aligned_cols=203 Identities=23% Similarity=0.281 Sum_probs=167.7
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcc
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1300 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1300 (1460)
+..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ + .+
T Consensus 322 ~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~----------~~ 388 (556)
T PRK11819 322 DKVIEAENLSKSFGD--RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-T----------VK 388 (556)
T ss_pred CeEEEEEeEEEEECC--eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-c----------eE
Confidence 346999999999964 3699999999999999999999999999999999999999999999954 2 16
Q ss_pred cEEEeCCC-ccCCc-cHHHhcCcCCCC---C--hHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHH
Q 000497 1301 FAVVPQSP-FLFEG-SLRDNLDPFHMN---D--DLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARA 1372 (1460)
Q Consensus 1301 i~iVpQdp-~lf~g-TIR~NLdp~~~~---s--d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARA 1372 (1460)
++|+||++ .+++. |+++|+...... . +.+.. +.++.+|+.. ........||||||||++||||
T Consensus 389 i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~---------~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~a 459 (556)
T PRK11819 389 LAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSR---------AYVGRFNFKGGDQQKKVGVLSGGERNRLHLAKT 459 (556)
T ss_pred EEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHH---------HHHHhCCCChhHhcCchhhCCHHHHHHHHHHHH
Confidence 99999997 56654 999998643211 1 11112 2344456643 3455566899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeC-CeEEE-EcChhHHhccC
Q 000497 1373 LLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-GHLVE-QGNPQTLLQDE 1447 (1460)
Q Consensus 1373 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~-G~IvE-~G~p~eLl~~~ 1447 (1460)
++.+|++|||||||++||+.+.+.+.+.|++. + .|||+|||+++.+.. ||||++|++ |++.+ .|+++++++++
T Consensus 460 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~~ 535 (556)
T PRK11819 460 LKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEEDK 535 (556)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHHH
Confidence 99999999999999999999999999999875 4 499999999998876 899999986 88874 78898887654
No 78
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=5e-60 Score=597.74 Aligned_cols=467 Identities=19% Similarity=0.237 Sum_probs=347.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhh
Q 000497 954 SFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAV 1033 (1460)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~ 1033 (1460)
.++.++..+.....+.+...+++.++++++++.|+++|++.++|++++|+++|++.+...+. .+..++..++.+++.++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~ 140 (547)
T PRK10522 62 MAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAA 140 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 44556677778888999999999999999999999999999999999999999999887544 34555666666777777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcH---HHHHHHHHHHHH
Q 000497 1034 VLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSE---DYFMAKFKEHVV 1110 (1460)
Q Consensus 1034 ~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e---~~~~~~~~~~~d 1110 (1460)
++.+.+|.++++++..+.+...+..+..+..+...+......+.+.+++.|.++|+.+++ ++.+ +.+.+++.+..+
T Consensus 141 ~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~ 219 (547)
T PRK10522 141 YLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQ 219 (547)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHH
Confidence 777777777665544444333333333333333333334556778899999999999995 5443 456777777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1111 LYQRTSYSELTASLWLSLRLQLLAAFI-ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEK 1189 (1460)
Q Consensus 1111 ~~~~~~~~~~~~~~wl~~~l~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~ 1189 (1460)
...+..+...... .....+..++ ...+++..+... .. .....+.++....+...+..++..+...+.++..
T Consensus 220 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~ 291 (547)
T PRK10522 220 EYRHHIIRADTFH----LSAVNWSNIMMLGAIGLVFYMAN--SL--GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLS 291 (547)
T ss_pred HHHhhhHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH--Hh--hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655444322111 1111111111 111111111111 00 0112233333333444456788889999999999
Q ss_pred HHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHH
Q 000497 1190 EMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILN 1269 (1460)
Q Consensus 1190 ~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~ 1269 (1460)
...+.+|+.++.+.++|+......+ -|..+.|+|+||+|+|++ .+++|+|+||+|+|||++||+||||||||||++
T Consensus 292 ~~~a~~ri~~l~~~~~~~~~~~~~~---~~~~~~i~~~~v~f~y~~-~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ 367 (547)
T PRK10522 292 AQVAFNKLNKLALAPYKAEFPRPQA---FPDWQTLELRNVTFAYQD-NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAM 367 (547)
T ss_pred HHHHHHHHHHHhccccccccccccc---cCcCceEEEEEEEEEeCC-CCeEEecceEEEcCCCEEEEECCCCCCHHHHHH
Confidence 9999999999876554321111111 122367999999999974 356999999999999999999999999999999
Q ss_pred HHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCc
Q 000497 1270 ALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLE 1349 (1460)
Q Consensus 1270 ~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLd 1349 (1460)
+|+|+++|++|+|.+||+|+++++.+++|+++++|||||.+|+||+++| ....+|++++++++++++.+.+.
T Consensus 368 ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~----- 439 (547)
T PRK10522 368 LLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLE----- 439 (547)
T ss_pred HHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhh-----
Confidence 9999999999999999999999999999999999999999999999999 23456778888887776654432
Q ss_pred hhhhc---CCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcC
Q 000497 1350 TFVKE---SGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMD 1424 (1460)
Q Consensus 1350 t~v~e---~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~D 1424 (1460)
.++ +|.+||||||||++||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||++++..||
T Consensus 440 --~~~~~~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d 517 (547)
T PRK10522 440 --LEDGRISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHAD 517 (547)
T ss_pred --ccccCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCC
Confidence 222 378999999999999999999999999999999999999999999987654 4899999999999999999
Q ss_pred EEEEEeCCeEEEE-cChhHHh
Q 000497 1425 EILILDHGHLVEQ-GNPQTLL 1444 (1460)
Q Consensus 1425 rIlVl~~G~IvE~-G~p~eLl 1444 (1460)
+|++|++|+++|. |+..+-.
T Consensus 518 ~i~~l~~G~i~e~~~~~~~~~ 538 (547)
T PRK10522 518 RLLEMRNGQLSELTGEERDAA 538 (547)
T ss_pred EEEEEECCEEEEecCCchhhh
Confidence 9999999999987 5554443
No 79
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.8e-62 Score=609.91 Aligned_cols=442 Identities=19% Similarity=0.241 Sum_probs=330.8
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|+++.|.. +.+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 4 l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~ 77 (490)
T PRK10938 4 LQISQGTFRLSD------TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQK 77 (490)
T ss_pred EEEEeEEEEcCC------eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHH
Confidence 788999999853 1259999999999999999999999999999999999999999998754
Q ss_pred cEEEEcCCCCC---------CCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHH
Q 000497 674 SIAYVPQVPWI---------LSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 744 (1460)
Q Consensus 674 ~i~y~~Q~p~l---------~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~ 744 (1460)
.++|++|+|.+ +..|++||+.++.. ++++..++++..++.... ......||||||||++
T Consensus 78 ~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~ 145 (490)
T PRK10938 78 LVSDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITALL-----------DRRFKYLSTGETRKTL 145 (490)
T ss_pred HhceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhhh-----------hCCcccCCHHHHHHHH
Confidence 27999998743 14599999876532 345666777777765432 3345689999999999
Q ss_pred HHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHh
Q 000497 745 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 745 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
||||+..+|++|||||||++||+...+++.+.+ .....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 146 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l-~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 224 (490)
T PRK10938 146 LCQALMSEPDLLILDEPFDGLDVASRQQLAELL-ASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQ 224 (490)
T ss_pred HHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHH-HHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999888763 2212347899999999998865 99999999999998876554321
Q ss_pred ccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHHHHHhhhhhHHHHH
Q 000497 824 SLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITL 903 (1460)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~ 903 (1460)
... . .+..+.
T Consensus 225 ~~~--------------------------------------------~-------~~~~~~------------------- 234 (490)
T PRK10938 225 QAL--------------------------------------------V-------AQLAHS------------------- 234 (490)
T ss_pred chh--------------------------------------------h-------hhhhhh-------------------
Confidence 000 0 000000
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 904 VICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 983 (1460)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~v 983 (1460)
..+ ..
T Consensus 235 --------------------~~~-~~------------------------------------------------------ 239 (490)
T PRK10938 235 --------------------EQL-EG------------------------------------------------------ 239 (490)
T ss_pred --------------------hcc-Cc------------------------------------------------------
Confidence 000 00
Q ss_pred hcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 984 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1063 (1460)
Q Consensus 984 l~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~ 1063 (1460)
.
T Consensus 240 --------------------------~----------------------------------------------------- 240 (490)
T PRK10938 240 --------------------------V----------------------------------------------------- 240 (490)
T ss_pred --------------------------c-----------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1064 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIAT 1143 (1460)
Q Consensus 1064 sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 1143 (1460)
T Consensus 241 -------------------------------------------------------------------------------- 240 (490)
T PRK10938 241 -------------------------------------------------------------------------------- 240 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCcc
Q 000497 1144 MAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGL 1223 (1460)
Q Consensus 1144 ~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~ 1223 (1460)
.... ..+... ....+ +....
T Consensus 241 --------~~~~------------------------------------------------~~~~~~-~~~~~---~~~~~ 260 (490)
T PRK10938 241 --------QLPE------------------------------------------------PDEPSA-RHALP---ANEPR 260 (490)
T ss_pred --------ccCc------------------------------------------------cccccc-ccccC---CCCce
Confidence 0000 000000 00000 01225
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-CCceEEECCEeCCC-CChHHHhccc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-CGGQILVDGLNIIN-TPVRDLRGRF 1301 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-~~G~I~IDG~di~~-i~~~~lR~~i 1301 (1460)
|+++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+.++ ++|+|.+||.++.. .+....|+++
T Consensus 261 l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 338 (490)
T PRK10938 261 IVLNNGVVSYND--RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHI 338 (490)
T ss_pred EEEeceEEEECC--eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhhc
Confidence 999999999964 3599999999999999999999999999999999998876 69999999987632 2334568899
Q ss_pred EEEeCCCccCC---ccHHHhcCcC--C---CC--ChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000497 1302 AVVPQSPFLFE---GSLRDNLDPF--H---MN--DDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1370 (1460)
Q Consensus 1302 ~iVpQdp~lf~---gTIR~NLdp~--~---~~--sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LA 1370 (1460)
+++||++.++. -|+++++.+. . .. .+.+. +....+.++.+|++. ........||||||||++||
T Consensus 339 ~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la 413 (490)
T PRK10938 339 GYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQ-----QKLAQQWLDILGIDKRTADAPFHSLSWGQQRLALIV 413 (490)
T ss_pred eEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHH-----HHHHHHHHHHcCCchhhccCchhhCCHHHHHHHHHH
Confidence 99999986542 3677776421 1 01 01111 111233444456665 45556678999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC-C-cEEEEeccChhhHhh--cCEEEEEeCCeEEEEc
Q 000497 1371 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK-G-MTVITIAHRISTVLN--MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1371 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~-~-~TvI~IaHrl~ti~~--~DrIlVl~~G~IvE~G 1438 (1460)
||++++|++|||||||++||+++.+.+.+.|++..+ + .|||+|||+++.+.. ||+|++|++|++++.-
T Consensus 414 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 414 RALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred HHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEee
Confidence 999999999999999999999999999999987643 3 479999999999975 6999999999998754
No 80
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.5e-60 Score=602.14 Aligned_cols=480 Identities=22% Similarity=0.285 Sum_probs=332.6
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--cEEEEcCCCC
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPW 683 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~p~ 683 (1460)
.++++|++++|+.+ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ .||||+|+|+
T Consensus 4 ~i~~~nls~~~~~~-----~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~ 78 (552)
T TIGR03719 4 IYTMNRVSKVVPPK-----KEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQ 78 (552)
T ss_pred EEEEeeEEEecCCC-----CeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCC
Confidence 47899999998521 2359999999999999999999999999999999999999999999874 6999999999
Q ss_pred CCC-ccHHHHHccCCC-------------------CC--------hHHHHHHHHHhcch---HH----HhhccCCCcccc
Q 000497 684 ILS-GTIRDNILFGKN-------------------YD--------PQSYSETLKACTLD---VD----ISLMVGGDMAYI 728 (1460)
Q Consensus 684 l~~-~ti~~nI~~g~~-------------------~~--------~~~~~~v~~~~~l~---~d----i~~~~~gd~t~v 728 (1460)
+++ .|++|||.++.. .+ .+++.++++.++.. .. ++.+ |.. ..
T Consensus 79 ~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~-~~ 155 (552)
T TIGR03719 79 LDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL--RCP-PW 155 (552)
T ss_pred CCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC--CCC-cc
Confidence 875 499999987521 01 01234444455432 11 1111 111 12
Q ss_pred cCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEE
Q 000497 729 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVM 807 (1460)
Q Consensus 729 g~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l 807 (1460)
.....+|||||||||+||||++.+|+++||||||++||+.+.+++.+. +.. . +.|+|+|||+++++.. ||+|++|
T Consensus 156 ~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~-L~~-~--~~tvIiisHd~~~~~~~~d~v~~l 231 (552)
T TIGR03719 156 DADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQH-LQE-Y--PGTVVAVTHDRYFLDNVAGWILEL 231 (552)
T ss_pred cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHH-HHh-C--CCeEEEEeCCHHHHHhhcCeEEEE
Confidence 456779999999999999999999999999999999999999988876 332 2 3599999999999875 9999999
Q ss_pred eCCeEE-EecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccch
Q 000497 808 DKGQVK-WIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVE 886 (1460)
Q Consensus 808 ~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~ 886 (1460)
++|+++ ..|+++++..... ... + ....+.+..+
T Consensus 232 ~~g~i~~~~g~~~~~~~~~~------------~~~--------------~---------------~~~~~~~~~~----- 265 (552)
T TIGR03719 232 DRGRGIPWEGNYSSWLEQKE------------KRL--------------E---------------QEEKEESARQ----- 265 (552)
T ss_pred ECCEEEEecCCHHHHHHHHH------------HHH--------------H---------------HHHHHHHHHH-----
Confidence 999975 6788877643100 000 0 0000000000
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 887 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 966 (1460)
Q Consensus 887 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 966 (1460)
..+.. ...|...
T Consensus 266 -----~~~~~--------------------------~~~~~~~------------------------------------- 277 (552)
T TIGR03719 266 -----KALKR--------------------------ELEWVRS------------------------------------- 277 (552)
T ss_pred -----HHHHH--------------------------HHHHHHh-------------------------------------
Confidence 00000 0000000
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHH
Q 000497 967 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1046 (1460)
Q Consensus 967 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ 1046 (1460)
.+
T Consensus 278 -------------------~~----------------------------------------------------------- 279 (552)
T TIGR03719 278 -------------------SP----------------------------------------------------------- 279 (552)
T ss_pred -------------------hh-----------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1047 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1126 (1460)
Q Consensus 1047 ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1126 (1460)
.. ++. +. +
T Consensus 280 ---------------~~-~~~------------------------------------~~--------~------------ 287 (552)
T TIGR03719 280 ---------------KA-RQA------------------------------------KS--------K------------ 287 (552)
T ss_pred ---------------hh-HHH------------------------------------HH--------H------------
Confidence 00 000 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCcc
Q 000497 1127 SLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY-MDVPQ 1205 (1460)
Q Consensus 1127 ~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~-~~~~~ 1205 (1460)
......++..+. ...++
T Consensus 288 --------------------------------------------------------------~~~~~~~~~~~~~~~~~~ 305 (552)
T TIGR03719 288 --------------------------------------------------------------ARLARYEELLSQEFQKRN 305 (552)
T ss_pred --------------------------------------------------------------HHHHHHHhhhhhcccccC
Confidence 000000000000 00000
Q ss_pred cccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEEC
Q 000497 1206 EELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD 1285 (1460)
Q Consensus 1206 E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ID 1285 (1460)
+... ...+...-+.+..++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++
T Consensus 306 ~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~ 382 (552)
T TIGR03719 306 ETAE-IYIPPGPRLGDKVIEAENLSKGFGD--KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIG 382 (552)
T ss_pred CCce-eecCCCCCCCCeEEEEeeEEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEEC
Confidence 0000 0000000011236999999999964 369999999999999999999999999999999999999999999995
Q ss_pred CEeCCCCChHHHhcccEEEeCCCc-cCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCC
Q 000497 1286 GLNIINTPVRDLRGRFAVVPQSPF-LFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISF 1359 (1460)
Q Consensus 1286 G~di~~i~~~~lR~~i~iVpQdp~-lf~-gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~L 1359 (1460)
+ + .+++|+||++. +++ -|+++|+..... ....+. ...+.++.+|++. ........|
T Consensus 383 ~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~-------~~~~~l~~~~l~~~~~~~~~~~L 444 (552)
T TIGR03719 383 E-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREV-------PSRAYVGRFNFKGSDQQKKVGQL 444 (552)
T ss_pred C-c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchH-------HHHHHHHhCCCChhHhcCchhhC
Confidence 4 2 16999999973 665 499999965321 111110 0123444456653 345556789
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeC-CeEEE-
Q 000497 1360 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-GHLVE- 1436 (1460)
Q Consensus 1360 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~-G~IvE- 1436 (1460)
|||||||++||||++.+|++|||||||++||..+.+.+.+.|++. . .|||+|||+++.+.. ||+|++|++ |++.+
T Consensus 445 SgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~ 522 (552)
T TIGR03719 445 SGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIATHILAFEGDSHVEWF 522 (552)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhCCEEEEEECCCeEEEe
Confidence 999999999999999999999999999999999999999999876 3 499999999999876 899999987 68874
Q ss_pred EcChhHHhcc
Q 000497 1437 QGNPQTLLQD 1446 (1460)
Q Consensus 1437 ~G~p~eLl~~ 1446 (1460)
.|+++++.+.
T Consensus 523 ~g~~~~~~~~ 532 (552)
T TIGR03719 523 EGNYSEYEED 532 (552)
T ss_pred CCCHHHHHHH
Confidence 5888777643
No 81
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.5e-59 Score=541.14 Aligned_cols=514 Identities=23% Similarity=0.280 Sum_probs=409.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--CCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000497 289 KVVNDSIGFAGPLLLNKLIKFLQQ--GSG--HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCL 364 (1460)
Q Consensus 289 ~l~~~~~~~~~P~ll~~li~~~~~--~~~--~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L 364 (1460)
.+..-.+....|++++.+++.+.. ..+ .......+.+++++.++.+++.-........+..++-......+|++.+
T Consensus 39 l~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~ 118 (591)
T KOG0057|consen 39 LLGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLM 118 (591)
T ss_pred HHhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333356677899999999999864 222 2233455666777778888888888888888888888889999999999
Q ss_pred cCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHHHHHH
Q 000497 365 YVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILL-IPVNKWIANL 442 (1460)
Q Consensus 365 ~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~-~~~~~~~~~~ 442 (1460)
.++.+.+.+..+|++.+.|..-...|..... .+..+....+++.++...+++..|.+..+...+.+.. ......++.+
T Consensus 119 ~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~ 198 (591)
T KOG0057|consen 119 SLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRW 198 (591)
T ss_pred hhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhH
Confidence 9999999889999999999888888887654 4566777888999989999999998765544433332 3334455666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 000497 443 IANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTL-FSLFTF 521 (1460)
Q Consensus 443 ~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~-~~~~~f 521 (1460)
-.+.+++.+++.++..+..-+.|.|-.+||.|+-|+...++....-.+--+...+.....++.++. ...+ ....++
T Consensus 199 Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfg---Q~~iFsv~~~~ 275 (591)
T KOG0057|consen 199 RNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFG---QKAIFSVALTF 275 (591)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHH---HHHHHHHHHHH
Confidence 678899999999999999999999999999999999888887654322222222222122222222 2211 122233
Q ss_pred HHHH----HhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCC
Q 000497 522 GLFA----LMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGL 597 (1460)
Q Consensus 522 ~~~~----~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~ 597 (1460)
..|. +.++.+|.+...-..+++.+|..|+..|...+..+.++..-++-.....+.++ + . +....|.
T Consensus 276 im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~--~-i-~~~~~~i------ 345 (591)
T KOG0057|consen 276 IMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDE--D-I-QEAALPI------ 345 (591)
T ss_pred HHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhh--h-h-hhccCCc------
Confidence 3333 45568999999999999999999999999999998888877765543332111 1 1 1100111
Q ss_pred ccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC----
Q 000497 598 SNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---- 673 (1460)
Q Consensus 598 ~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---- 673 (1460)
...+..|+|+|++|+|.++ +++|+++||+|++||.+||||+|||||||++++|+++++ .+|+|.++|
T Consensus 346 ---~~~~~~I~F~dV~f~y~~k-----~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik 416 (591)
T KOG0057|consen 346 ---ELFGGSIEFDDVHFSYGPK-----RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIK 416 (591)
T ss_pred ---ccCCCcEEEEeeEEEeCCC-----CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHh
Confidence 1234569999999999742 446999999999999999999999999999999999999 999999998
Q ss_pred ---------cEEEEcCCCCCCCccHHHHHccCCCC-ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000497 674 ---------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 743 (1460)
Q Consensus 674 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv 743 (1460)
.||||||+..|||+||.+||.+|++. .+++..++++..++++-+..+|+|++|.|||+|..|||||||||
T Consensus 417 ~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrv 496 (591)
T KOG0057|consen 417 EVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRV 496 (591)
T ss_pred hhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHH
Confidence 49999999999999999999999864 66778888888899999999999999999999999999999999
Q ss_pred HHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHh
Q 000497 744 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 744 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
|||||+.+||+|+++|||||+||.+|++.+++. +.+ ...+||+|+|.||++.++.+|+|++++||++.+.|+++|++.
T Consensus 497 slaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~-i~~-~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 497 SLARAFLKDAPILLLDEATSALDSETEREILDM-IMD-VMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred HHHHHHhcCCCeEEecCcccccchhhHHHHHHH-HHH-hcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 999999999999999999999999999999998 455 678999999999999999999999999999999999999987
Q ss_pred ccc
Q 000497 824 SLY 826 (1460)
Q Consensus 824 ~~~ 826 (1460)
..+
T Consensus 575 ~s~ 577 (591)
T KOG0057|consen 575 PSE 577 (591)
T ss_pred hhh
Confidence 433
No 82
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=5.9e-59 Score=640.46 Aligned_cols=545 Identities=19% Similarity=0.182 Sum_probs=399.5
Q ss_pred cHHHHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 269 SLVRAICCAYGYPYIC-LGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSK 346 (1460)
Q Consensus 269 ~l~~~l~~~~~~~~~~-~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~ 346 (1460)
+.++..+++.++.... .+++.++..++....|+.++...+.-. +.......+. .+.++++.++..++.....+....
T Consensus 953 ~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~-~~iy~~l~i~~~~~~~~~~~~~~~ 1031 (1522)
T TIGR00957 953 SVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLR-LSVYGALGILQGFAVFGYSMAVSI 1031 (1522)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566665543332 233444555667778888876665321 1111111221 122333333344444344455566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000497 347 LKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSG 425 (1460)
Q Consensus 347 ~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g 425 (1460)
.+.+.-..+...+|+|.++.+...++..+.|+++|.++.|++.+..... .+..+...++.++.++.++.....+.+++.
T Consensus 1032 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~ 1111 (1522)
T TIGR00957 1032 GGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVII 1111 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888889999999999999999999999999999999999987544 345555566665554444433322322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 426 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 505 (1460)
Q Consensus 426 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 505 (1460)
++++++...+..+..+..+..++...+.++...+..+|.++|+++||.||+|+.|.++..+..+...+..........+.
T Consensus 1112 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1191 (1522)
T TIGR00957 1112 PPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWL 1191 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222333334444444455555556666777899999999999999999999988887766554444433322233332
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhh
Q 000497 506 VFFWATTPTLFSLFTFGLFAL-MGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 584 (1460)
Q Consensus 506 ~~~~~~~~~~~~~~~f~~~~~-~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~ 584 (1460)
.........+ .++..+.+.+ ..+.+++|.+..++.+...+..|+..+...+..+..+.+|.+||.+|++.++..+...
T Consensus 1192 ~~~~~~~~~~-~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~ 1270 (1522)
T TIGR00957 1192 AVRLECVGNC-IVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQI 1270 (1522)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 2221111111 1222233333 3567999999999999999999999999999999999999999999997654321100
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC
Q 000497 585 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 664 (1460)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~ 664 (1460)
. ...++. . -+.++.|+++|++|+|+++. +++|+|+||+|++||.++|||++|||||||+++|+|.++|
T Consensus 1271 ~-~~~~~~------~-wp~~g~I~f~nVsf~Y~~~~----~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~ 1338 (1522)
T TIGR00957 1271 Q-ETAPPS------G-WPPRGRVEFRNYCLRYREDL----DLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES 1338 (1522)
T ss_pred c-CCCCCC------C-CCCCCcEEEEEEEEEeCCCC----cccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC
Confidence 0 000100 0 02346799999999997542 2469999999999999999999999999999999999999
Q ss_pred CCeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000497 665 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 731 (1460)
Q Consensus 665 ~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~ 731 (1460)
++|+|.++| +|+||||+|.||+|||||||....++++++..++++.|++++.++.+|+|.+|.|||+
T Consensus 1339 ~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1339 AEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred CCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 999999987 5999999999999999999983347888899999999999999999999999999999
Q ss_pred CCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000497 732 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 811 (1460)
Q Consensus 732 g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 811 (1460)
|.+||||||||++||||++++|+|+|||||||+||+++++.|.+. +.. ..+++|+|+||||++.+..+|+|++|++|+
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~-l~~-~~~~~TvI~IAHRl~ti~~~DrIlVld~G~ 1496 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQST-IRT-QFEDCTVLTIAHRLNTIMDYTRVIVLDKGE 1496 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999887766 443 567899999999999999999999999999
Q ss_pred EEEecCHHHHHhccccCc
Q 000497 812 VKWIGSSADLAVSLYSGF 829 (1460)
Q Consensus 812 i~~~g~~~~l~~~~~~~~ 829 (1460)
|++.|+|+|++++.+.+.
T Consensus 1497 IvE~G~~~eLl~~~~~f~ 1514 (1522)
T TIGR00957 1497 VAEFGAPSNLLQQRGIFY 1514 (1522)
T ss_pred EEEECCHHHHHhCCCHHH
Confidence 999999999987654443
No 83
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.7e-60 Score=529.42 Aligned_cols=460 Identities=25% Similarity=0.355 Sum_probs=345.7
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEeC------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------ 673 (1460)
..+.++|.+.++.... ....++++|||++++||.+++||.||||||-..++++|.++. -+|+|..+|
T Consensus 5 ~lL~v~nLsV~f~~~~--~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~ 82 (534)
T COG4172 5 PLLSIRNLSVAFHQEG--GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAA 82 (534)
T ss_pred cceeeeccEEEEecCC--cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcC
Confidence 3567788887776543 234579999999999999999999999999999999999875 467888776
Q ss_pred -----------cEEEEcCCCCC-CCc--cHHHH----HccCCCCC----hHHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000497 674 -----------SIAYVPQVPWI-LSG--TIRDN----ILFGKNYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEK 731 (1460)
Q Consensus 674 -----------~i~y~~Q~p~l-~~~--ti~~n----I~~g~~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~ 731 (1460)
+|+.++|+|-- .|- ||..- |...+..+ +++..+.++..++.+- ...+..-
T Consensus 83 se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p--------~~rl~~y 154 (534)
T COG4172 83 SERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEP--------EKRLDAY 154 (534)
T ss_pred CHHHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCch--------hhhhhhC
Confidence 69999999952 232 55544 44444333 3344555555555321 1123344
Q ss_pred CCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCC
Q 000497 732 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKG 810 (1460)
Q Consensus 732 g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G 810 (1460)
...|||||||||-||.||..+||+||-||||.|||..+..+|++-+-.-....|..++++||++..++. ||+|+||.+|
T Consensus 155 PHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G 234 (534)
T COG4172 155 PHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHG 234 (534)
T ss_pred CcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEecc
Confidence 569999999999999999999999999999999999999999986322113347799999999999986 9999999999
Q ss_pred eEEEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHH
Q 000497 811 QVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVY 890 (1460)
Q Consensus 811 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 890 (1460)
+++|.|+.+++.+.... .|
T Consensus 235 ~ivE~~~t~~lF~~PqH-------------------------------------------------------------pY 253 (534)
T COG4172 235 EIVETGTTETLFAAPQH-------------------------------------------------------------PY 253 (534)
T ss_pred EEeecCcHHHHhhCCCC-------------------------------------------------------------hH
Confidence 99998876554321000 00
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 891 KNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLR 970 (1460)
Q Consensus 891 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 970 (1460)
T Consensus 254 -------------------------------------------------------------------------------- 253 (534)
T COG4172 254 -------------------------------------------------------------------------------- 253 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHH
Q 000497 971 AAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFW 1050 (1460)
Q Consensus 971 ~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~ 1050 (1460)
T Consensus 254 -------------------------------------------------------------------------------- 253 (534)
T COG4172 254 -------------------------------------------------------------------------------- 253 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1051 FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRL 1130 (1460)
Q Consensus 1051 ~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l 1130 (1460)
.+ +
T Consensus 254 ----------Tr---~---------------------------------------------------------------- 256 (534)
T COG4172 254 ----------TR---K---------------------------------------------------------------- 256 (534)
T ss_pred ----------HH---H----------------------------------------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccc
Q 000497 1131 QLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCG 1210 (1460)
Q Consensus 1131 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~ 1210 (1460)
+++ .|+. +
T Consensus 257 ---------------------------------------------------------------------Ll~--aeP~-g 264 (534)
T COG4172 257 ---------------------------------------------------------------------LLA--AEPS-G 264 (534)
T ss_pred ---------------------------------------------------------------------HHh--cCCC-C
Confidence 000 0100 0
Q ss_pred CCCCCCCCCCCccEEEEEEEEEecCC---------CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCce
Q 000497 1211 YQSLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQ 1281 (1460)
Q Consensus 1211 ~~~~~~~wp~~g~I~f~nvs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~ 1281 (1460)
..+|..-...-.++.+||.+.|+-. .-.+.++|||+.++||.+||||+||||||||-.+|+|+++++ |+
T Consensus 265 -~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~ 342 (534)
T COG4172 265 -DPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GE 342 (534)
T ss_pred -CCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ce
Confidence 0111111122357778888877421 124799999999999999999999999999999999999976 99
Q ss_pred EEECCEeCCCCChHH---HhcccEEEeCCCcc-CC--ccHHHhcC----cCC-CCC----hHHHHHHHHHhcHHHHHHhC
Q 000497 1282 ILVDGLNIINTPVRD---LRGRFAVVPQSPFL-FE--GSLRDNLD----PFH-MND----DLKIWSVLEKCHVKEEVEAV 1346 (1460)
Q Consensus 1282 I~IDG~di~~i~~~~---lR~~i~iVpQdp~l-f~--gTIR~NLd----p~~-~~s----d~ei~~aL~~~~l~~~i~~l 1346 (1460)
|..+|.||...+.++ +|+++-+|.|||+= ++ .||-+=+. -.. ..+ |+++.+||+.+||+...
T Consensus 343 I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~--- 419 (534)
T COG4172 343 IRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPAT--- 419 (534)
T ss_pred EEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhH---
Confidence 999999999888765 57999999999971 22 25544432 111 112 34566666666544322
Q ss_pred CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-c
Q 000497 1347 GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-M 1423 (1460)
Q Consensus 1347 gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~ 1423 (1460)
...-...|||||||||+||||++-+|++++||||||+||..-...|.+.+++.- .+-+-++|+|+|..++. |
T Consensus 420 -----r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~ 494 (534)
T COG4172 420 -----RNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALC 494 (534)
T ss_pred -----hhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhh
Confidence 234455799999999999999999999999999999999999999999998763 47799999999999986 8
Q ss_pred CEEEEEeCCeEEEEcChhHHhccCCcHHHHH
Q 000497 1424 DEILILDHGHLVEQGNPQTLLQDECSVFSSF 1454 (1460)
Q Consensus 1424 DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l 1454 (1460)
|+|+||.+|+|||+|+-+++.+++...|.+-
T Consensus 495 ~~viVm~~GkiVE~G~~~~if~~P~~~YT~~ 525 (534)
T COG4172 495 HRVIVMRDGKIVEQGPTEAVFANPQHEYTRA 525 (534)
T ss_pred ceEEEEeCCEEeeeCCHHHHhcCCCcHHHHH
Confidence 9999999999999999999999998877653
No 84
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-59 Score=596.51 Aligned_cols=200 Identities=22% Similarity=0.343 Sum_probs=164.5
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
..|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+++. .++
T Consensus 311 ~~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 311 PLLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred ceEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 36999999999963 46999999999999999999999999999999999999999999999741 269
Q ss_pred EEEeCCC--ccCC-ccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1302 AVVPQSP--FLFE-GSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1302 ~iVpQdp--~lf~-gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
+|+||++ .+.. .|+.+++.... ...++++. +.+..+|+.. ........||||||||++||||++++
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---------~~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~~ 448 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLR---------DYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQR 448 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHH---------HHHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 9999985 3443 37887763211 11122333 3344445542 34555668999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEE-EEcChhHHhc
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLV-EQGNPQTLLQ 1445 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~Iv-E~G~p~eLl~ 1445 (1460)
|++|||||||++||..+.+.+.+.|++. . .|||+|||+++.+.. ||||++|++|+++ ..|++++..+
T Consensus 449 p~lLlLDEPt~~LD~~~~~~l~~~L~~~-~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 449 PNLLLLDEPTNHLDLDMRQALTEALIDF-E-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 9999999999999999999999999875 4 599999999999876 8999999999997 6799988843
No 85
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.2e-58 Score=595.80 Aligned_cols=542 Identities=23% Similarity=0.285 Sum_probs=402.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCC-CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 888 TVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSS-QTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 966 (1460)
Q Consensus 888 ~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~-~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 966 (1460)
++.+.-++..||..+...++..+. .......+..+....+..... .+......|+...++..++.+++.....+....
T Consensus 190 sl~~al~~~f~~~~~~~~~~~~~~-~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~ 268 (1381)
T KOG0054|consen 190 SLLRALLRTFGRTFLLSGIFLFLR-DLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFR 268 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 444445555555544444333333 333666677776665543322 222333455555666666677766666777788
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHH------H
Q 000497 967 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQ------V 1040 (1460)
Q Consensus 967 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~------~ 1040 (1460)
.+.|....+-..+++|.++.+-..-..++.|+|+|-++.|.+.+++..++....+...+..+++...+.-... .
T Consensus 269 ~g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~ 348 (1381)
T KOG0054|consen 269 VGMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGV 348 (1381)
T ss_pred hhhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 8889888999999999999998888889999999999999999999888877777666554444333322222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1041 FFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSEL 1120 (1460)
Q Consensus 1041 ~~~~~~ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~ 1120 (1460)
.++++++|+-.......+.|++ .....+..-....+|.++|+++||.|+||+.|.++..+.-+.-.+......
T Consensus 349 ~~~il~~p~n~~~a~~~~~~q~-------~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~ 421 (1381)
T KOG0054|consen 349 AVMVLLIPLNSFLAKKIAKFQK-------RLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSA 421 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------HHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333444444443333333332 223333333456899999999999999999999998776554333332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000497 1121 TASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY 1200 (1460)
Q Consensus 1121 ~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~ 1200 (1460)
..+...... .....+++.++.+.+... ...+..++..+..++++.-.+..++..+......+-+..+|++|+++|
T Consensus 422 ~~~~~~~~~-~~~~p~lv~~~tF~~~v~----~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~f 496 (1381)
T KOG0054|consen 422 YLSALNSFL-NFFSPVLVSVVTFVVFVL----LLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEF 496 (1381)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHhh----ccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222111 112222222222222210 112344566777777777777788888888888888899999999999
Q ss_pred hcCcccccccCCCCCCCCCCCccEEEEEEEEEecCC-CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCC
Q 000497 1201 MDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG 1279 (1460)
Q Consensus 1201 ~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~ 1279 (1460)
+..++.+...... .+.-+.+-.|+++|.+|+++++ .++.|+||||+|++||.+||||++|||||||+++|+|.++..+
T Consensus 497 l~~~e~~~~~~~~-~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~s 575 (1381)
T KOG0054|consen 497 LLSEELDPDSVER-SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLS 575 (1381)
T ss_pred hcCcccCcccccc-CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCccccc
Confidence 9765432211111 1222345579999999999864 4459999999999999999999999999999999999999999
Q ss_pred ceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCC
Q 000497 1280 GQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1357 (1460)
Q Consensus 1280 G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~ 1357 (1460)
|++.++|. ++||||.|++|+|||||||.++.++++++..++++.|+|++.++.+ |-.|+|||+|.
T Consensus 576 G~v~v~gs-------------iaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGi 642 (1381)
T KOG0054|consen 576 GSVAVNGS-------------VAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGI 642 (1381)
T ss_pred ceEEEcCe-------------EEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCcc
Confidence 99999884 9999999999999999999999999999999999999999999999 99999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHH-HHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEE
Q 000497 1358 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASI-LQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVE 1436 (1460)
Q Consensus 1358 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~-Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE 1436 (1460)
|||||||||++||||++++++|++||+|-|+||+++.+. +++.|+...++||+|.|||+++.+..||+|+||++|+|+|
T Consensus 643 nLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~ 722 (1381)
T KOG0054|consen 643 NLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVE 722 (1381)
T ss_pred CCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEec
Confidence 999999999999999999999999999999999999875 5778888889999999999999999999999999999999
Q ss_pred EcChhHHhccCCcHHHHHHHh
Q 000497 1437 QGNPQTLLQDECSVFSSFVRA 1457 (1460)
Q Consensus 1437 ~G~p~eLl~~~~~~f~~l~~~ 1457 (1460)
.|+|+||++. ++.|.++.++
T Consensus 723 ~Gty~el~~~-~~~~~~l~~~ 742 (1381)
T KOG0054|consen 723 SGTYEELLKS-GGDFAELAHE 742 (1381)
T ss_pred ccCHHHHHhc-chhHHHHhhc
Confidence 9999999974 5688887544
No 86
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=6e-58 Score=619.34 Aligned_cols=211 Identities=20% Similarity=0.299 Sum_probs=172.7
Q ss_pred cEEEEEEEEEecC-----------CCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC--CCceEEECCEeC
Q 000497 1223 LIEFQNVTMRYKP-----------SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNI 1289 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~-----------~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~--~~G~I~IDG~di 1289 (1460)
.+.|+||++.++. +...+|+|||++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6999999988742 123699999999999999999999999999999999999863 689999999886
Q ss_pred CCCChHHHhcccEEEeCCCccCCc-cHHHhcCcCC------CCChHH----HHHHHHHhcHHHHHHhCCCchhhhcCC-C
Q 000497 1290 INTPVRDLRGRFAVVPQSPFLFEG-SLRDNLDPFH------MNDDLK----IWSVLEKCHVKEEVEAVGLETFVKESG-I 1357 (1460)
Q Consensus 1290 ~~i~~~~lR~~i~iVpQdp~lf~g-TIR~NLdp~~------~~sd~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G-~ 1357 (1460)
. ....|+.++||+|++.+++. |+||||.+.. ..++++ +.++++..+|.+. .|+.+|..+ .
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-----~~~~vg~~~~~ 1018 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-----KDAIVGLPGVT 1018 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-----hCCccCCCCCC
Confidence 4 34567889999999988765 9999996421 122222 3445555554432 255555433 5
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-H-hhcCEEEEEeC-Ce
Q 000497 1358 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST-V-LNMDEILILDH-GH 1433 (1460)
Q Consensus 1358 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~t-i-~~~DrIlVl~~-G~ 1433 (1460)
.||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. +++|||+++|+++. + ..||++++|++ |+
T Consensus 1019 ~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~ 1098 (1470)
T PLN03140 1019 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1098 (1470)
T ss_pred CcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCE
Confidence 799999999999999999999999999999999999999999998864 48999999999984 3 56899999996 89
Q ss_pred EEEEcChh
Q 000497 1434 LVEQGNPQ 1441 (1460)
Q Consensus 1434 IvE~G~p~ 1441 (1460)
++++|++.
T Consensus 1099 ~v~~G~~~ 1106 (1470)
T PLN03140 1099 VIYSGPLG 1106 (1470)
T ss_pred EEEECCcc
Confidence 99999974
No 87
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-56 Score=520.13 Aligned_cols=539 Identities=20% Similarity=0.233 Sum_probs=389.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 271 VRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSG--HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 348 (1460)
Q Consensus 271 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~--~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (1460)
++...+ .++.++.++++.++..+....-=++-..+|..-.-... ....++-+++.=+..++.++..+.-........
T Consensus 8 i~l~~~-~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~At 86 (573)
T COG4987 8 LRLYKR-HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHDAT 86 (573)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 444444 66667666665555444333333333333322111111 112233344444566777777766666777888
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhHHHHHHHH
Q 000497 349 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAW--SLPFQIGVALYLLYTQVKFAFVSGL 426 (1460)
Q Consensus 349 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~--~~pl~i~i~~~lL~~~lg~a~l~g~ 426 (1460)
.++-+.++-.+|+|....+......+..|++.|.+..|++.+++...-+..-| +..+.+++.+.+-+..++.+.+.++
T Consensus 87 frvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~ 166 (573)
T COG4987 87 FRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGL 166 (573)
T ss_pred HHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999999998888888999999999999999998654433322 2222233334444667777777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 427 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 506 (1460)
Q Consensus 427 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 506 (1460)
...++.+.+...+.+.-++..++..+.+..--+.+.+.+.|....+++|.++.+.+.+++.-..=.+.-++...+..+..
T Consensus 167 ~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~ 246 (573)
T COG4987 167 ILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSD 246 (573)
T ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555555555555655566666666666666788899999999999999998888776543333333333333333333
Q ss_pred HHHHHHHHHH---HHHHHHHHHHhCCCCC-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchh
Q 000497 507 FFWATTPTLF---SLFTFGLFALMGHQLD-AAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 582 (1460)
Q Consensus 507 ~~~~~~~~~~---~~~~f~~~~~~~~~Lt-~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~ 582 (1460)
++..+...+. .+++++.-. -.+..+ +..+...+..|..+..-....|..+..+.+...|.+|+.+.++.++....
T Consensus 247 a~~~l~~g~~v~~~l~w~a~~~-~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~ 325 (573)
T COG4987 247 AILLLIAGLLVIGLLLWMAAQV-GAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTF 325 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-cCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCC
Confidence 3322221111 122222211 123344 33333333334433322222236778888999999999999876543221
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCc
Q 000497 583 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 662 (1460)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~ 662 (1460)
. . ... ...+..++++|++|+|+..+ .++|+|+||++++||.++|+|++|||||||++.|.|-+
T Consensus 326 ~-~-~~~-----------~~~~~~l~~~~vsF~y~~~~----~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~ 388 (573)
T COG4987 326 P-D-EQT-----------ATTGQALELRNVSFTYPGQQ----TKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAW 388 (573)
T ss_pred C-c-ccc-----------CCccceeeeccceeecCCCc----cchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhcc
Confidence 1 0 000 11223799999999998642 34699999999999999999999999999999999999
Q ss_pred cCCCeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccc
Q 000497 663 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYI 728 (1460)
Q Consensus 663 ~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~v 728 (1460)
+|++|+|..+| .+++++|.+.+|++|+|||+.++++ .++|...+++++.+|++-++..|+|.+|.+
T Consensus 389 ~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~l 468 (573)
T COG4987 389 DPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWL 468 (573)
T ss_pred CCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchh
Confidence 99999999987 5899999999999999999999986 467889999999999999999999999999
Q ss_pred cCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEe
Q 000497 729 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMD 808 (1460)
Q Consensus 729 g~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~ 808 (1460)
||+|..||||||||+||||++.+|++++||||||.+||+.|++++++. +.. ..+|||+|+||||+..++.+|+|++|+
T Consensus 469 ge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~l-l~~-~~~~kTll~vTHrL~~le~~drIivl~ 546 (573)
T COG4987 469 GEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLAL-LFE-HAEGKTLLMVTHRLRGLERMDRIIVLD 546 (573)
T ss_pred ccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHH-HHH-HhcCCeEEEEecccccHhhcCEEEEEE
Confidence 999999999999999999999999999999999999999999999987 343 678999999999999999999999999
Q ss_pred CCeEEEecCHHHHHhccccCcc
Q 000497 809 KGQVKWIGSSADLAVSLYSGFW 830 (1460)
Q Consensus 809 ~G~i~~~g~~~~l~~~~~~~~~ 830 (1460)
+|+++++|+|.+++.+++.+.+
T Consensus 547 ~Gkiie~G~~~~Ll~~~g~~~~ 568 (573)
T COG4987 547 NGKIIEEGTHAELLANNGRYKR 568 (573)
T ss_pred CCeeeecCCHHhhhccccHHHH
Confidence 9999999999999986665543
No 88
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1e-57 Score=583.60 Aligned_cols=203 Identities=24% Similarity=0.299 Sum_probs=164.9
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +++
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 5899999999964 46999999999999999999999999999999999999999999999 4332 699
Q ss_pred EEeCCC-ccCCc-cHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1303 VVPQSP-FLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1303 iVpQdp-~lf~g-TIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
|++|++ .+++. |+++|+..... ....... ..+.+.+..+|+.. ........||||||||++||||++++|+
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~~~p~ 460 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRP-----RHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLFLKPSN 460 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchH-----HHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCC
Confidence 999986 46655 99999964321 1100000 11223344445542 3445556899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe-CCeEEEE-cChhHHhc
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD-HGHLVEQ-GNPQTLLQ 1445 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~-~G~IvE~-G~p~eLl~ 1445 (1460)
+|||||||++||..+.+.+.+.|++. +.|||+|||+++.+.. ||+|++|+ +|++.++ |++++.++
T Consensus 461 lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 461 LLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred EEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999875 5699999999999865 89999998 8999874 78888754
No 89
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.6e-56 Score=612.09 Aligned_cols=476 Identities=18% Similarity=0.197 Sum_probs=356.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000497 348 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGL 426 (1460)
Q Consensus 348 ~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~ 426 (1460)
+.+....+...+|++.++.+...+++.+.|+++|.++.|++.+..... .+..+....+.++.++.++.....+.+++.+
T Consensus 1026 ~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i 1105 (1560)
T PTZ00243 1026 MRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALV 1105 (1560)
T ss_pred HHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445677899999999999999999999999999999999988544 3444555555555444433332223222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 427 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 506 (1460)
Q Consensus 427 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 506 (1460)
.++++...+..++.+..+..++......+.-.+.++|.++|+++||.|++|+.+.++..+.-+...+...+......+..
T Consensus 1106 ~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~ 1185 (1560)
T PTZ00243 1106 PCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLG 1185 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222333344445555566666667777788999999999999999999998888876654444443332222222222
Q ss_pred HHHHHH--HHHHHHHHHHHH--HHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCch-
Q 000497 507 FFWATT--PTLFSLFTFGLF--ALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH- 581 (1460)
Q Consensus 507 ~~~~~~--~~~~~~~~f~~~--~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~- 581 (1460)
...... ...+.++.++++ ....+.++++.+..++.+...+..|+..+...+..+..+.+|++||.+|++..+.++
T Consensus 1186 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~ 1265 (1560)
T PTZ00243 1186 VRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDM 1265 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 211111 111112222222 223345789988888888899999999999999999999999999999996432111
Q ss_pred -hhhh-------hcCCCCc------ccCCC----ccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEE
Q 000497 582 -ELEQ-------AANSPSY------ISNGL----SNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAV 643 (1460)
Q Consensus 582 -~~~~-------~~~~~~~------~~~~~----~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~i 643 (1460)
.... ....+.+ ..... .+.....+.|+|+|++|+|+++. +++|+|+||+|++||.++|
T Consensus 1266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~----~~vL~~vsf~I~~GekVaI 1341 (1560)
T PTZ00243 1266 PELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGL----PLVLRGVSFRIAPREKVGI 1341 (1560)
T ss_pred ccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCC----CceeecceEEECCCCEEEE
Confidence 0000 0000000 00000 00011235799999999997531 2369999999999999999
Q ss_pred EcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHH
Q 000497 644 IGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKA 710 (1460)
Q Consensus 644 vG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~ 710 (1460)
||++|||||||+++|+|.++|++|+|.++| .|+||||+|.||+|||||||..+.++++++..++++.
T Consensus 1342 VGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~ 1421 (1560)
T PTZ00243 1342 VGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALEL 1421 (1560)
T ss_pred ECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHH
Confidence 999999999999999999999999999987 5999999999999999999988778899999999999
Q ss_pred hcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccC-CCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEE
Q 000497 711 CTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG-SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRI 789 (1460)
Q Consensus 711 ~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~-~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i 789 (1460)
|++++.++.+|+|.+|.+||+|.+||||||||++||||++++ |+|||||||||+||+++++.|.+. +.. ..+++|+|
T Consensus 1422 a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~-L~~-~~~~~TvI 1499 (1560)
T PTZ00243 1422 VGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQAT-VMS-AFSAYTVI 1499 (1560)
T ss_pred CCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HCCCCEEE
Confidence 999999999999999999999999999999999999999996 899999999999999999988776 443 55789999
Q ss_pred EEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhc-cccCc
Q 000497 790 LCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS-LYSGF 829 (1460)
Q Consensus 790 lvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~-~~~~~ 829 (1460)
+|+||++.+..||+|++|++|+|++.|+|+|++++ .+.+.
T Consensus 1500 ~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~ 1540 (1560)
T PTZ00243 1500 TIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFH 1540 (1560)
T ss_pred EEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHH
Confidence 99999999999999999999999999999999864 44443
No 90
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-58 Score=519.44 Aligned_cols=521 Identities=22% Similarity=0.287 Sum_probs=385.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCC-chhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 287 LLKVVNDSIGFAGPLLLNKLIKFLQQGSG-HLDGYVLAIALGLTSI---LKSFFDTQYSFHLSKLKLKLRSSIMTIIYQK 362 (1460)
Q Consensus 287 ~~~l~~~~~~~~~P~ll~~li~~~~~~~~-~~~g~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K 362 (1460)
++.++.-++...-|.+.+.+++.+..+.. .+......+.+.+.+- +..++.+...+...++..-....+...+|+|
T Consensus 222 ~ll~i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrH 301 (790)
T KOG0056|consen 222 FLLIIGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRH 301 (790)
T ss_pred HHHHHHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHH
Confidence 34444556677789999999988874221 1111122222322221 2355666666666666666667788899999
Q ss_pred HhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH---HHHHHHH
Q 000497 363 CLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILL---IPVNKWI 439 (1460)
Q Consensus 363 ~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~---~~~~~~~ 439 (1460)
...++....-.+.+|++...|..-+..+...-..+..+-...+.+++++. |..+..-...|+++++.+ ..+...+
T Consensus 302 lh~LSlrwHL~rrtGeVLrvmdrGtssvtll~yvVF~i~PtllDl~va~v--YF~~~Fn~wFgLIVfl~m~lY~~~Ti~i 379 (790)
T KOG0056|consen 302 LHNLSLRWHLNRRTGEVLRVMDRGTSSVTLLEYVVFQIGPTLLDLGVAMV--YFFIKFNIWFGLIVFLMMLLYCYVTIKI 379 (790)
T ss_pred HHhhceeeeecccccceeehhccCcchhhHHHHHHhhcccHHHHhhhhhh--hhhhhHhHHHHHHHHHHHHHHhheeeee
Confidence 99999877666788999999977766665333333344344445555443 333333334444433322 2223333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 440 ANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSW----LMKTRSSEVKHLSTRKYLDAWCVFFWATTPTL 515 (1460)
Q Consensus 440 ~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~----i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~ 515 (1460)
...-.++++++...-.+--..-.+.|-|-.+||.|+.|+...++ |.+..++|-+.+.....+....+.+.... +
T Consensus 380 TeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lg--l 457 (790)
T KOG0056|consen 380 TEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLG--L 457 (790)
T ss_pred ehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhH--H
Confidence 34445566665555555556667888899999999999765554 44444555554444333333322221111 1
Q ss_pred HHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccC
Q 000497 516 FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISN 595 (1460)
Q Consensus 516 ~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~ 595 (1460)
.....+.+|.+..+.++.|...-+..++-.+.+|++.+......++.+.+-++|+.+.++.++...+.+ ..++
T Consensus 458 l~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P---~a~p---- 530 (790)
T KOG0056|consen 458 LAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP---GAPP---- 530 (790)
T ss_pred hhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC---CCCC----
Confidence 222234567777889999998888899999999999999999999999999999999997543221111 1111
Q ss_pred CCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--
Q 000497 596 GLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-- 673 (1460)
Q Consensus 596 ~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-- 673 (1460)
.....+.|+++|++|+|+++ +++|+||||+++||+.+++|||+|+||||+++.|.++++..+|+|.++|
T Consensus 531 ----l~~~~G~i~fsnvtF~Y~p~-----k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqd 601 (790)
T KOG0056|consen 531 ----LKVTQGKIEFSNVTFAYDPG-----KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQD 601 (790)
T ss_pred ----ccccCCeEEEEEeEEecCCC-----CceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCch
Confidence 12356789999999999754 4459999999999999999999999999999999999999999999998
Q ss_pred -----------cEEEEcCCCCCCCccHHHHHccCCCC-ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHH
Q 000497 674 -----------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 741 (1460)
Q Consensus 674 -----------~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkq 741 (1460)
+||.||||..|||+||..||.++++- ..|...++.+|++.++.|..+|+|++|.|||+|..||||+||
T Consensus 602 Irnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQ 681 (790)
T KOG0056|consen 602 IRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQ 681 (790)
T ss_pred HHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchh
Confidence 59999999999999999999999863 456667788999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHH
Q 000497 742 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 821 (1460)
Q Consensus 742 Rv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l 821 (1460)
|||+||++.++|.|++|||+|||||.++++.|-.. +.. +..++|.|+|.||++.+-+||.|++++||+|+|.|+|+|+
T Consensus 682 RVAiARtiLK~P~iIlLDEATSALDT~tER~IQaa-L~r-lca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeL 759 (790)
T KOG0056|consen 682 RVAIARTILKAPSIILLDEATSALDTNTERAIQAA-LAR-LCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEEL 759 (790)
T ss_pred hHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHH-HHH-HhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHH
Confidence 99999999999999999999999999999987654 433 7789999999999999999999999999999999999999
Q ss_pred Hhc-cccCc
Q 000497 822 AVS-LYSGF 829 (1460)
Q Consensus 822 ~~~-~~~~~ 829 (1460)
... ++.+.
T Consensus 760 l~rdgG~Ya 768 (790)
T KOG0056|consen 760 LKRDGGAYA 768 (790)
T ss_pred HhccCCcHH
Confidence 876 44433
No 91
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.7e-55 Score=556.39 Aligned_cols=521 Identities=16% Similarity=0.123 Sum_probs=376.2
Q ss_pred HHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 274 ICC-AYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 352 (1460)
Q Consensus 274 l~~-~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r 352 (1460)
+++ .+++.++..+++.++..++....|.+++.+++..... .....+. +++..++..++.....+...+.+.++.
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (555)
T TIGR01194 11 LLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFL-GQGSLFS----FGGLCLLALLFRIGADIFPAYAGMHII 85 (555)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cchHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566 7788888888899999999999999999887632111 1111111 112233444555566677788899999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHHHH
Q 000497 353 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVAL-YLLYTQVKFAFVSGLAITIL 431 (1460)
Q Consensus 353 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~-~lL~~~lg~a~l~g~~v~~~ 431 (1460)
..++..+|+|.++++...+.+.++|++++.++.|++.+......+..+....+.+++++ ++++....++.+ .++++++
T Consensus 86 ~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li-~l~~~~~ 164 (555)
T TIGR01194 86 ANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAI-TISAIII 164 (555)
T ss_pred HHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHH
Confidence 99999999999999999888889999999999999999987655545544444443333 333333322222 2222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 432 LIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQ--IFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 509 (1460)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~--~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 509 (1460)
.+.+..+..++..+..++..+..++..+.+.|.+.|+++||.++.++ ...+++++..++..+...+..........+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (555)
T TIGR01194 165 GTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFG 244 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455566677777888888899999999999999999999854 3333333322221122111111111111111
Q ss_pred HHHHHHHHHHHHHHHHH---hCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhh
Q 000497 510 ATTPTLFSLFTFGLFAL---MGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQA 586 (1460)
Q Consensus 510 ~~~~~~~~~~~f~~~~~---~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~ 586 (1460)
... ..+.++.+.+ ..+.++.+.+++++.+...+..|+..+...++.+.++.+|.+||.++++.++.++.....
T Consensus 245 ~~~----~~~~~~~~~~~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~ 320 (555)
T TIGR01194 245 QLL----FFLLIGCALFAAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELEL 320 (555)
T ss_pred HHH----HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Confidence 111 1111111111 125799999999999999999999999999999999999999999998642211100000
Q ss_pred cCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC
Q 000497 587 ANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH 666 (1460)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~ 666 (1460)
..... ............++++|++|+|+..+. ..+++|+|+||++++|++++|+||||||||||+++|+|+++|++
T Consensus 321 ~~~~~---~~~~~~~~~~~~i~~~~v~f~y~~~~~-~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~ 396 (555)
T TIGR01194 321 SDADN---VLLLAHDKSVDSIELKDVHMNPKAPEG-SEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQE 396 (555)
T ss_pred ccccc---ccccccCCCCceEEEEEEEEEeCCCCC-CcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCC
Confidence 00000 000000112356999999999974311 11346999999999999999999999999999999999999999
Q ss_pred eEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000497 667 GSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 733 (1460)
Q Consensus 667 G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~ 733 (1460)
|+|.++| .++||+|+|++|++|+++|+ ..+.++++..++++.++++++++.+|+|++|. .
T Consensus 397 G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~ 469 (555)
T TIGR01194 397 GEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----T 469 (555)
T ss_pred cEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc-----c
Confidence 9999986 48999999999999999996 33456778889999999999999999999984 7
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000497 734 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 813 (1460)
Q Consensus 734 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 813 (1460)
+||||||||++||||++++|+|+|||||||+||+++++.+.+.++.....+++|+|+||||++.+..||+|++|++|+++
T Consensus 470 ~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~ 549 (555)
T TIGR01194 470 ALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIV 549 (555)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999988764322123589999999999999999999999999998
Q ss_pred Ee
Q 000497 814 WI 815 (1460)
Q Consensus 814 ~~ 815 (1460)
+.
T Consensus 550 ~~ 551 (555)
T TIGR01194 550 KD 551 (555)
T ss_pred Ee
Confidence 64
No 92
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.1e-56 Score=512.43 Aligned_cols=486 Identities=21% Similarity=0.258 Sum_probs=352.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHH-HHHHHHHH
Q 000497 947 CIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFI-LNILLANF 1025 (1460)
Q Consensus 947 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~-l~~~~~~~ 1025 (1460)
..+.++..++..+|.+.+.+.+.+.-.+++..++...+++|..--...+..+.++ |++.+...+... ..-++..=
T Consensus 70 l~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~Lr----DL~qvR~Fltg~g~~A~fDaP 145 (580)
T COG4618 70 LGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPLR----DLDQVRQFLTGTGLTAFFDAP 145 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccchh----hHHHHHHHHcCCCcchhcCCc
Confidence 3445567778889999999999999999999999999888876554444444444 444444333210 00000000
Q ss_pred HhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHH
Q 000497 1026 VGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKF 1105 (1460)
Q Consensus 1026 ~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~ 1105 (1460)
...+ .+.+++...||+.++.+...++...+...-...+++--+..++....-..+..-+..+.++|+|.|......+++
T Consensus 146 W~P~-yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW 224 (580)
T COG4618 146 WMPL-YLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRW 224 (580)
T ss_pred hHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHH
Confidence 0111 122333445666554443333322222222222222222223333444567778899999999999988777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1106 KEHVVLYQRTSYSELTASLWLSLRLQLLAAFII-SFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSF 1184 (1460)
Q Consensus 1106 ~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~ 1184 (1460)
.+....+....-...-.+.-++.....+-.++- .+..+.+.+.. .+..++|.+...--.+.....++...+..|
T Consensus 225 ~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi-----~ge~t~G~mIA~SIl~gRaLaPid~aI~~W 299 (580)
T COG4618 225 GRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVI-----KGEITPGMMIAGSILSGRALAPIDLAIANW 299 (580)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEE-----cCcCCcchhhHHHHHhhhhhccHHHHHHHH
Confidence 655444433322211111111111111111100 01111111111 234567766554444555566788899999
Q ss_pred HHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChH
Q 000497 1185 TETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGK 1264 (1460)
Q Consensus 1185 ~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGK 1264 (1460)
.++-.+..|..|+.++++..++.... ...| ..+|.+.++++++.=++..+|+|+||||+++|||-+||+|||||||
T Consensus 300 kq~~~Ar~s~~Rl~~lL~~~p~~~~~-m~LP---~P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGK 375 (580)
T COG4618 300 KQFVAARQSYKRLNELLAELPAAAER-MPLP---APQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGK 375 (580)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCC-CCCC---CCCceeeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccH
Confidence 99999999999999999765543221 1111 1379999999999666666799999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHH
Q 000497 1265 SSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEV 1343 (1460)
Q Consensus 1265 STLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i 1343 (1460)
|||.++|.|..+|.+|+|.+||-|+.+-+.+++-++|||.|||-.||+|||.|||.-|+ +.+++.|.+|.+.++.+|.|
T Consensus 376 STLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelI 455 (580)
T COG4618 376 STLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELI 455 (580)
T ss_pred HHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHH
Confidence 99999999999999999999999999999999999999999999999999999997666 66777899999999999999
Q ss_pred HhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhH
Q 000497 1344 EAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTV 1420 (1460)
Q Consensus 1344 ~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti 1420 (1460)
-.+ ||||.|||+|..|||||||||+||||++.+|++++||||.||||.+-|+.+.++|.+.. +|+|+|+||||.+.+
T Consensus 456 l~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L 535 (580)
T COG4618 456 LRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSAL 535 (580)
T ss_pred HhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHH
Confidence 999 99999999999999999999999999999999999999999999999999999987664 699999999999999
Q ss_pred hhcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1421 LNMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1421 ~~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
..+|+|+||++|++..+|+-+|.+++
T Consensus 536 ~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 536 ASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred hhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999999999999999875
No 93
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.7e-56 Score=570.57 Aligned_cols=200 Identities=22% Similarity=0.330 Sum_probs=162.0
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcc
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1300 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1300 (1460)
...++++|++++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ +.+
T Consensus 506 ~~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~ 573 (718)
T PLN03073 506 PPIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVR 573 (718)
T ss_pred CceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------cee
Confidence 3469999999999533 4699999999999999999999999999999999999999999999875 357
Q ss_pred cEEEeCCCccCCccHHHhcC-c----CCCCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHc
Q 000497 1301 FAVVPQSPFLFEGSLRDNLD-P----FHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1374 (1460)
Q Consensus 1301 i~iVpQdp~lf~gTIR~NLd-p----~~~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL 1374 (1460)
++|+||++. ...++.+|.. . +...+++++.++|+.. |++. ........||||||||++||||++
T Consensus 574 igyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~---------gl~~~~~~~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 574 MAVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSF---------GVTGNLALQPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHC---------CCChHHhcCCccccCHHHHHHHHHHHHHh
Confidence 999999973 2224444421 1 1122344454444444 5542 344556789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEE-EEcChhHHh
Q 000497 1375 KSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLV-EQGNPQTLL 1444 (1460)
Q Consensus 1375 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~Iv-E~G~p~eLl 1444 (1460)
++|++|||||||++||..+.+.+.+.+++. + .|||+|||+++.+.. ||||++|++|+++ ..|++++..
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999999999999999998888764 4 499999999999976 8999999999998 568887753
No 94
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.6e-55 Score=537.02 Aligned_cols=484 Identities=23% Similarity=0.301 Sum_probs=336.5
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--cEEEEcCCCC
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPW 683 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~p~ 683 (1460)
.+.++|++.++.. +++++|+||++.+|+.+++||+|||||||||++|.|+..|++|+|...+ ++||++|+|.
T Consensus 3 ~i~~~~ls~~~g~------~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~ 76 (530)
T COG0488 3 MITLENLSLAYGD------RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPP 76 (530)
T ss_pred eEEEeeeEEeeCC------ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCC
Confidence 4678899998842 3459999999999999999999999999999999999999999999986 7999999999
Q ss_pred CCCc-cHHHHHccCCCC-C--hHHHHHHH---------------------HHhcchHHHhhccCC--CcccccCCCCccc
Q 000497 684 ILSG-TIRDNILFGKNY-D--PQSYSETL---------------------KACTLDVDISLMVGG--DMAYIGEKGVNLS 736 (1460)
Q Consensus 684 l~~~-ti~~nI~~g~~~-~--~~~~~~v~---------------------~~~~l~~di~~~~~g--d~t~vg~~g~~LS 736 (1460)
.... ||+|.+.-+... . ..+|+++. +...++.+++..-.| .... .....+||
T Consensus 77 ~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~LS 155 (530)
T COG0488 77 LDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSSLS 155 (530)
T ss_pred cCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhhcC
Confidence 9865 999999876421 0 01111111 111222232222222 1111 34556899
Q ss_pred cHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEE-E
Q 000497 737 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK-W 814 (1460)
Q Consensus 737 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~-~ 814 (1460)
||||.||+|||||..+||+|||||||++||..+.+|+-+.+ . ..+| |+|+|||+.++|.. |++|+.++.|++. +
T Consensus 156 GG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L-~--~~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y 231 (530)
T COG0488 156 GGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYL-K--RYPG-TVIVVSHDRYFLDNVATHILELDRGKLTPY 231 (530)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHH-H--hCCC-cEEEEeCCHHHHHHHhhheEEecCCceeEe
Confidence 99999999999999999999999999999999999998873 2 2345 99999999999987 9999999999865 5
Q ss_pred ecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHHHHHh
Q 000497 815 IGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYA 894 (1460)
Q Consensus 815 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~ 894 (1460)
.|.|+...+..... .. .+ .. ..+..+++.++
T Consensus 232 ~Gny~~~~~~r~~~-------------~~-----------~~----~~--------~~~~~~~~~~~------------- 262 (530)
T COG0488 232 KGNYSSYLEQKAER-------------LR-----------QE----AA--------AYEKQQKELAK------------- 262 (530)
T ss_pred cCCHHHHHHHHHHH-------------HH-----------HH----HH--------HHHHHHHHHHH-------------
Confidence 67777664321000 00 00 00 00000000000
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 895 KFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVK 974 (1460)
Q Consensus 895 ~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1460)
+..|+..
T Consensus 263 ----------------------------~~~~i~r--------------------------------------------- 269 (530)
T COG0488 263 ----------------------------EQEWIRR--------------------------------------------- 269 (530)
T ss_pred ----------------------------HHHHHHH---------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHH
Q 000497 975 VHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYS 1054 (1460)
Q Consensus 975 lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~ 1054 (1460)
+.
T Consensus 270 ----------------------------~~-------------------------------------------------- 271 (530)
T COG0488 270 ----------------------------GK-------------------------------------------------- 271 (530)
T ss_pred ----------------------------HH--------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1055 KLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLA 1134 (1460)
Q Consensus 1055 ~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~ 1134 (1460)
...+++++.
T Consensus 272 ----~~~~~~k~a------------------------------------------------------------------- 280 (530)
T COG0488 272 ----AAASKAKKA------------------------------------------------------------------- 280 (530)
T ss_pred ----hccchHHHH-------------------------------------------------------------------
Confidence 000000000
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCcccccc-c-
Q 000497 1135 AFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM--DVPQEELC-G- 1210 (1460)
Q Consensus 1135 ~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~--~~~~E~~~-~- 1210 (1460)
+......+|+.+-. ..|.+... .
T Consensus 281 -----------------------------------------------------~sr~k~l~k~~~~~~~~~~~~~~~~~~ 307 (530)
T COG0488 281 -----------------------------------------------------KSRIKRLEKLEARLAEERPVEEGKPLA 307 (530)
T ss_pred -----------------------------------------------------HHHHHHHHHHHhhhhhcccccccccce
Confidence 00001111111100 00000000 0
Q ss_pred -CCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeC
Q 000497 1211 -YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNI 1289 (1460)
Q Consensus 1211 -~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di 1289 (1460)
...+++.-..+-.++++|+++.|.++ .++++++||.|.+|++|||+||||+|||||+++|.|-..|.+|+|.+.-
T Consensus 308 ~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~--- 383 (530)
T COG0488 308 FRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGE--- 383 (530)
T ss_pred eeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCC---
Confidence 00011111224479999999999655 6799999999999999999999999999999999999999999998753
Q ss_pred CCCChHHHhcccEEEeCCC-ccCC-ccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000497 1290 INTPVRDLRGRFAVVPQSP-FLFE-GSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1366 (1460)
Q Consensus 1290 ~~i~~~~lR~~i~iVpQdp-~lf~-gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1366 (1460)
.-++||.+|+- .+++ .|+-+++..... ..+.++...|.+.++... .+......||||||-|
T Consensus 384 --------~v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~--------~~~~~v~~LSGGEk~R 447 (530)
T COG0488 384 --------TVKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGE--------DQEKPVGVLSGGEKAR 447 (530)
T ss_pred --------ceEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChH--------HHhCchhhcCHhHHHH
Confidence 12699999997 3443 388888865432 235666666666554321 1223344799999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEE-cChhHHh
Q 000497 1367 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQ-GNPQTLL 1444 (1460)
Q Consensus 1367 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~-G~p~eLl 1444 (1460)
+.||+.++.+|++|||||||.+||.+|.+.+.++|.++ .-|||+|+|+...+.. |++|+++++ ++.++ |.+++..
T Consensus 448 l~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~ 524 (530)
T COG0488 448 LLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYL 524 (530)
T ss_pred HHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHH
Confidence 99999999999999999999999999999999999764 4499999999999987 799999999 88887 8999887
Q ss_pred ccC
Q 000497 1445 QDE 1447 (1460)
Q Consensus 1445 ~~~ 1447 (1460)
+..
T Consensus 525 ~~~ 527 (530)
T COG0488 525 EQK 527 (530)
T ss_pred Hhh
Confidence 653
No 95
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.1e-53 Score=586.46 Aligned_cols=483 Identities=18% Similarity=0.213 Sum_probs=359.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Q 000497 340 YSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQV 418 (1460)
Q Consensus 340 ~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~l 418 (1460)
..+...+.+.+....+...+|++.++.+...++..+.|+++|.++.|++.+..... .+..+....+.+++.+.++....
T Consensus 945 ~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~ 1024 (1490)
T TIGR01271 945 RGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQ 1024 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455667778888888999999999999999999999999999999999987543 34455555555554444444333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Q 000497 419 KFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTR 498 (1460)
Q Consensus 419 g~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~ 498 (1460)
++.+++.++++++++.+..+..+..+..++.....++...+...|.++|+.+||.||+|+.+.++..+.-+...+.....
T Consensus 1025 p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1490)
T TIGR01271 1025 PYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLY 1104 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 33333222233333334444555555566667777788889999999999999999999999888776644322221111
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 000497 499 KYLDAWCVFFWAT-TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCS 577 (1460)
Q Consensus 499 ~~~~~~~~~~~~~-~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~ 577 (1460)
.....+....... ...++..+.+ ..+.....+++.+-.++++...+..++..+...+..+..+.+|.+||.+|++.+
T Consensus 1105 ~~~~~wl~~~~~~i~~~~~~~~~~--l~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~ 1182 (1490)
T TIGR01271 1105 LSTLRWFQMRIDIIFVFFFIAVTF--IAIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLP 1182 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1111121111111 1011111111 111112345666666777777888899998889999999999999999999765
Q ss_pred CCchhhhhhcCCCC-----cccCCCcc-CCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcH
Q 000497 578 EYKHELEQAANSPS-----YISNGLSN-FNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGK 651 (1460)
Q Consensus 578 e~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGK 651 (1460)
+..+.......... .......+ .-+..+.|+++|++|+|+++. +++|+|+||+|++||.++|||++||||
T Consensus 1183 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~----~~vL~~is~~I~~GekvaIvGrSGsGK 1258 (1490)
T TIGR01271 1183 QEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAG----RAVLQDLSFSVEGGQRVGLLGRTGSGK 1258 (1490)
T ss_pred CccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCC----cceeeccEEEEcCCCEEEEECCCCCCH
Confidence 43221000000000 00000000 002346799999999997532 346999999999999999999999999
Q ss_pred HHHHHHHhcCccCCCeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHh
Q 000497 652 SSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDIS 718 (1460)
Q Consensus 652 Stll~~l~g~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~ 718 (1460)
|||+++|+|.++ .+|+|.++| +++||||+|.||+|||||||....++++++..++++.|+|.+.+.
T Consensus 1259 STLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~ 1337 (1490)
T TIGR01271 1259 STLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIE 1337 (1490)
T ss_pred HHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHH
Confidence 999999999997 799999987 599999999999999999998767788999999999999999999
Q ss_pred hccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchh
Q 000497 719 LMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI 798 (1460)
Q Consensus 719 ~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l 798 (1460)
.+|+|.+|.|||+|.+||||||||++||||++++|+|+|||||||+||+++.+.|.+. +.. ..+++|+|+||||++.+
T Consensus 1338 ~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~-L~~-~~~~~TvI~IaHRl~ti 1415 (1490)
T TIGR01271 1338 QFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKT-LKQ-SFSNCTVILSEHRVEAL 1415 (1490)
T ss_pred hCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHH
Confidence 9999999999999999999999999999999999999999999999999999988876 443 55789999999999999
Q ss_pred hcCCEEEEEeCCeEEEecCHHHHHhccccCccc
Q 000497 799 SAADMVVVMDKGQVKWIGSSADLAVSLYSGFWS 831 (1460)
Q Consensus 799 ~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 831 (1460)
..+|+|++|++|+|++.|+|+++.+..+.+.++
T Consensus 1416 ~~~DrIlvL~~G~ivE~g~p~~Ll~~~~~f~~l 1448 (1490)
T TIGR01271 1416 LECQQFLVIEGSSVKQYDSIQKLLNETSLFKQA 1448 (1490)
T ss_pred HhCCEEEEEECCEEEEeCCHHHHHcCCcHHHHH
Confidence 999999999999999999999998755555444
No 96
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=5.1e-56 Score=557.39 Aligned_cols=192 Identities=21% Similarity=0.320 Sum_probs=161.3
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.++++|++++|+. ..|+++||+|++||++||+|+||||||||+++|.|+++|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 5899999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred EEeCCCcc-CCccHHHhcCcCC-CCC-hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1303 VVPQSPFL-FEGSLRDNLDPFH-MND-DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1303 iVpQdp~l-f~gTIR~NLdp~~-~~s-d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
|+||++.+ ++.|+++|+.... ... +... .+.++.+|++........+||||||||++|||||+++|+|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~---------~~~L~~l~l~~~~~~~~~~LSGGe~QRvaiAraL~~~p~l 474 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYK---------SEIIKPLQLERLLDKNVKDLSGGELQRVAIAACLSRDADL 474 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHH---------HHHHHHCCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999875 4569999986431 111 1122 3344445666555666778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcCh
Q 000497 1380 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1440 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1440 (1460)
|||||||++||.++...+.+.|++.. .++|+|+|||+++.+.. ||||++|+ |++...|+.
T Consensus 475 lLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~-~~~~~~g~~ 537 (590)
T PRK13409 475 YLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFE-GEPGKHGHA 537 (590)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEc-Ccceeeeec
Confidence 99999999999999999999998864 37899999999999875 89999996 488777663
No 97
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3.5e-54 Score=551.12 Aligned_cols=513 Identities=15% Similarity=0.128 Sum_probs=384.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 901 ITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYST----SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVH 976 (1460)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~----~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh 976 (1460)
.+++.+++.++...+....+++.+...+.....+ .... ..++++++++.++..+..++...+......+....+|
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~-~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~ 175 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRS-PRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLY 175 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555566666666777766655321111 1111 1223333344444555555555566667777788888
Q ss_pred HHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHH-HHHHHHHHHHHHHHHHHH
Q 000497 977 NTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSY-VQVFFLLLLVPFWFIYSK 1055 (1460)
Q Consensus 977 ~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~-~~~~~~~~~ip~~~~~~~ 1055 (1460)
++.+++....++.|||. ++|++.+|+++|++.+.+.+...+..++..++.+++..+.+.. ..|.+.++++...++...
T Consensus 176 ~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~ 254 (659)
T TIGR00954 176 SKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGV 254 (659)
T ss_pred HHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 88888888888899997 7899999999999999999988888888888888776666554 556555544444444555
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1056 LQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAA 1135 (1460)
Q Consensus 1056 i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~ 1135 (1460)
+.+++.+..+++.+......+.+.+.+.|.++|+++||+|+.|+.+.+++.+..++..+..........++....+++..
T Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 334 (659)
T TIGR00954 255 VLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAK 334 (659)
T ss_pred HHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 55556666666666666677788899999999999999999999999999999998888888777777777666665543
Q ss_pred HH---HHHHHH-HHHHhhcCCCCCCcchHHH-HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q 000497 1136 FI---ISFIAT-MAVIGSRGNLPATFSTPGL-VGLALSY---AAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1207 (1460)
Q Consensus 1136 ~~---~~~~~~-~~v~~~~~~~~~~~~~~g~-vgl~l~~---~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~ 1207 (1460)
.. +..+.. ..++...+ ...+..+.|. ++..++| +..+..++..+...+.++.+..++.+|+.++.+.++|.
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~-~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~ 413 (659)
T TIGR00954 335 YTWSAVGLVAVSIPIFDKTH-PAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDV 413 (659)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 111111 11211110 0012234443 3333333 55667888999999999999999999999998764432
Q ss_pred ccc------CCC----------C------CCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHH
Q 000497 1208 LCG------YQS----------L------SPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKS 1265 (1460)
Q Consensus 1208 ~~~------~~~----------~------~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKS 1265 (1460)
... ... + .......+.|+++||+++|+++ +++|+|+||+|++||++||+||||||||
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGKS 492 (659)
T TIGR00954 414 KSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGKS 492 (659)
T ss_pred hcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCCHH
Confidence 100 000 0 0001134679999999999643 4699999999999999999999999999
Q ss_pred HHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcC--------CCCChHHHHHHHHHh
Q 000497 1266 SILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF--------HMNDDLKIWSVLEKC 1337 (1460)
Q Consensus 1266 TLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~--------~~~sd~ei~~aL~~~ 1337 (1460)
||+++|.|+++|++|+|.+|+ |+++++|||+|.+|++|+|||+... ...++++++++++.+
T Consensus 493 TLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~ 561 (659)
T TIGR00954 493 SLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNV 561 (659)
T ss_pred HHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHc
Confidence 999999999999999999874 6789999999999999999999753 234678899999999
Q ss_pred cHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccC
Q 000497 1338 HVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHR 1416 (1460)
Q Consensus 1338 ~l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHr 1416 (1460)
++.++++.- |+|+..++ +.+||||||||++||||++++|+++|||||||+||+++++.+++.+++. ++|+|+||||
T Consensus 562 ~l~~~~~~~~g~~~~~~~-~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~ 638 (659)
T TIGR00954 562 QLTHILEREGGWSAVQDW-MDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHR 638 (659)
T ss_pred CCHHHHhhcCCccccccc-ccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCc
Confidence 999988766 99998764 5699999999999999999999999999999999999999999999874 8999999999
Q ss_pred hhhHhhcCEEEEEeC
Q 000497 1417 ISTVLNMDEILILDH 1431 (1460)
Q Consensus 1417 l~ti~~~DrIlVl~~ 1431 (1460)
++++..||+|++|+.
T Consensus 639 ~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 639 KSLWKYHEYLLYMDG 653 (659)
T ss_pred hHHHHhCCEEEEEeC
Confidence 999999999999973
No 98
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=5.2e-53 Score=533.86 Aligned_cols=508 Identities=17% Similarity=0.155 Sum_probs=362.4
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 270 LVRAICCAYGYPYICLGLLKVVNDSIGFAG-PLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 348 (1460)
Q Consensus 270 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~-P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (1460)
+++.+++.+++.++...++.++..++.++. |++.+.++|.+... ......+++.+++. .++.....+...+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 76 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTS--LLVLPEFLGLLLLL----MAVTLGSQLALTTLG 76 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--chHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 566778888888888888889988888874 77888888865321 11111111111111 223344556667788
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000497 349 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 428 (1460)
Q Consensus 349 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v 428 (1460)
.++...+...+|+|.++++...+++.++|++++.++.|++.+......+..++...+.+++++++++..-...+++.+++
T Consensus 77 ~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~ 156 (547)
T PRK10522 77 HHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAIW 156 (547)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 88888899999999999999988889999999999999999987655566677777766665554444333333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 429 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYG--WEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 506 (1460)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g--~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 506 (1460)
+++.+.+..++.++..+..++.++..++..+.+.|.++|++++++.+ .++.+.++..+..++-.+...+.........
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (547)
T PRK10522 157 MAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSAV 236 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 44444566777888888888999999999999999999999997433 2234444444432222222112221111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC---CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhh
Q 000497 507 FFWATTPTLFSLFTFGLFALMGH---QLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHEL 583 (1460)
Q Consensus 507 ~~~~~~~~~~~~~~f~~~~~~~~---~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~ 583 (1460)
.+.. +...+.++.+.+.++ ..+.+.+.+...+...+..|+..+...++.+.++..+++|+.+++..++..+..
T Consensus 237 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~ 312 (547)
T PRK10522 237 NWSN----IMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEFP 312 (547)
T ss_pred HHHH----HHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 1111 111112222222221 122222222222333467899999999999999999999999998644321100
Q ss_pred hhhcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc
Q 000497 584 EQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM 663 (1460)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~ 663 (1460)
. ..+ .+....++++|++|+|+.+ +++|+|+||++++|+.++|+||||||||||+++|+|+++
T Consensus 313 -~--~~~----------~~~~~~i~~~~v~f~y~~~-----~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~ 374 (547)
T PRK10522 313 -R--PQA----------FPDWQTLELRNVTFAYQDN-----GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQ 374 (547)
T ss_pred -c--ccc----------cCcCceEEEEEEEEEeCCC-----CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 0 000 0112469999999999732 235999999999999999999999999999999999999
Q ss_pred CCCeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccC
Q 000497 664 LTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGE 730 (1460)
Q Consensus 664 ~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~ 730 (1460)
|++|+|.++| .++||+|+|++|++|++|| +.+.+++...++++.+++..++.. ++|. .
T Consensus 375 ~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~ 445 (547)
T PRK10522 375 PQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----I 445 (547)
T ss_pred CCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----C
Confidence 9999999876 5999999999999999999 456677788888888888776652 3321 2
Q ss_pred CCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhcCCEEEEEeC
Q 000497 731 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDK 809 (1460)
Q Consensus 731 ~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~ 809 (1460)
+|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+ .... .+++|+|+|||+++.+..||+|++|++
T Consensus 446 ~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l-~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 524 (547)
T PRK10522 446 SNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVL-LPLLQEMGKTIFAISHDDHYFIHADRLLEMRN 524 (547)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHH-HHHHHhCCCEEEEEEechHHHHhCCEEEEEEC
Confidence 48899999999999999999999999999999999999999888763 2212 147899999999999999999999999
Q ss_pred CeEEEe
Q 000497 810 GQVKWI 815 (1460)
Q Consensus 810 G~i~~~ 815 (1460)
|++++.
T Consensus 525 G~i~e~ 530 (547)
T PRK10522 525 GQLSEL 530 (547)
T ss_pred CEEEEe
Confidence 999875
No 99
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.5e-53 Score=499.11 Aligned_cols=442 Identities=25% Similarity=0.345 Sum_probs=333.4
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|.+=+|+. .++|+|+||++.+||+++++|.||+|||||+|.|.|.++|++|+|.++|
T Consensus 7 ~ll~~~~i~K~Fgg------V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A 80 (500)
T COG1129 7 PLLELRGISKSFGG------VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDA 80 (500)
T ss_pred ceeeeecceEEcCC------ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHH
Confidence 45778888887763 2459999999999999999999999999999999999999999999987
Q ss_pred ---cEEEEcCCCCCCC-ccHHHHHccCCCC-------ChHHHH----HHHHHhcchHHHhhccCCCcccccCCCCccccH
Q 000497 674 ---SIAYVPQVPWILS-GTIRDNILFGKNY-------DPQSYS----ETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 738 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~~-------~~~~~~----~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGG 738 (1460)
.|+.|.|++-|+. -||.|||-+|++. |..+.+ ++++..++..| ......+||+|
T Consensus 81 ~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~-----------~~~~v~~Lsia 149 (500)
T COG1129 81 LAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDID-----------PDTLVGDLSIA 149 (500)
T ss_pred HhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCC-----------hhhhhhhCCHH
Confidence 4999999998775 5999999888753 323222 23333222211 23344589999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecC
Q 000497 739 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 817 (1460)
Q Consensus 739 QkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 817 (1460)
|||-|+||||++.+++|+|||||||+|+.+..+++|+. +.....+|.++|+|||+++++.. ||+|.||+||+.+..++
T Consensus 150 qrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~-ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~ 228 (500)
T COG1129 150 QRQMVEIARALSFDARVLILDEPTAALTVKETERLFDL-IRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRP 228 (500)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecc
Confidence 99999999999999999999999999999999999986 44435578899999999998765 99999999999875432
Q ss_pred H-HHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHHHHHhhh
Q 000497 818 S-ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKF 896 (1460)
Q Consensus 818 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~ 896 (1460)
. .++ +.++.. .
T Consensus 229 ~~~~~------------------------------------------------~~~~lv----------~---------- 240 (500)
T COG1129 229 TAAET------------------------------------------------SEDELV----------R---------- 240 (500)
T ss_pred cccCC------------------------------------------------CHHHHH----------H----------
Confidence 1 100 000000 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 897 SGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVH 976 (1460)
Q Consensus 897 ~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh 976 (1460)
++
T Consensus 241 -----------------------------~M------------------------------------------------- 242 (500)
T COG1129 241 -----------------------------LM------------------------------------------------- 242 (500)
T ss_pred -----------------------------Hh-------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000497 977 NTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKL 1056 (1460)
Q Consensus 977 ~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i 1056 (1460)
+|+
T Consensus 243 -------------------vGr---------------------------------------------------------- 245 (500)
T COG1129 243 -------------------VGR---------------------------------------------------------- 245 (500)
T ss_pred -------------------hCc----------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1057 QFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAF 1136 (1460)
Q Consensus 1057 ~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~ 1136 (1460)
+
T Consensus 246 ---------~---------------------------------------------------------------------- 246 (500)
T COG1129 246 ---------E---------------------------------------------------------------------- 246 (500)
T ss_pred ---------c----------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCC
Q 000497 1137 IISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSP 1216 (1460)
Q Consensus 1137 ~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~ 1216 (1460)
..+..++. +.
T Consensus 247 ---------------------------------------------------------------~~~~~~~~-------~~ 256 (500)
T COG1129 247 ---------------------------------------------------------------LEDLFPEP-------PE 256 (500)
T ss_pred ---------------------------------------------------------------hhhhcccc-------cc
Confidence 00000000 00
Q ss_pred CCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCC-hH
Q 000497 1217 DWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VR 1295 (1460)
Q Consensus 1217 ~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~ 1295 (1460)
.-+..-.++++|++.. ..++|+||++++||.+||.|=-|||+|-++.+|+|.-++.+|+|.+||.++.--+ .+
T Consensus 257 ~~~~~~~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~ 330 (500)
T COG1129 257 EGIGEPVLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRD 330 (500)
T ss_pred cCCCCcEEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHH
Confidence 0001124667777642 2588999999999999999999999999999999999999999999999887665 56
Q ss_pred HHhcccEEEeCCCc---cC-CccHHHhcCcCC--CCChH-HHHHHHHHhcHHHHHHhCCCchh-hhcCCCCCChhHHHHH
Q 000497 1296 DLRGRFAVVPQSPF---LF-EGSLRDNLDPFH--MNDDL-KIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~---lf-~gTIR~NLdp~~--~~sd~-ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQrl 1367 (1460)
..+..|+|||-|-- +| ..+|++|+.... .++.. -+...-++.-..++++.++..+. ....-.+||||.+|++
T Consensus 331 Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v~~LSGGNQQKV 410 (500)
T COG1129 331 AIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPIGTLSGGNQQKV 410 (500)
T ss_pred HHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchhhcCCchhhhhH
Confidence 88889999999864 44 559999986431 11100 13333444455666776633322 1122347999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhH
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQT 1442 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~e 1442 (1460)
+|||.|..+|+||||||||.++|..+.+.|.+.|++.. +|.+||+|+-.+.++. -||||+||.+|+++..=+.++
T Consensus 411 vlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e~~~~~ 487 (500)
T COG1129 411 VLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGELDREE 487 (500)
T ss_pred HHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEEecccc
Confidence 99999999999999999999999999999999999875 5899999999999987 699999999999987544443
No 100
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3e-50 Score=514.94 Aligned_cols=516 Identities=16% Similarity=0.171 Sum_probs=374.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 281 PYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIY 360 (1460)
Q Consensus 281 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy 360 (1460)
.++...++.++.+++....|++.+.+++.+.+.+.... ..+.+.++++.++.+++.....|...++..++|..+...++
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f-~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~ 175 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNF-AWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLY 175 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566778888889999999999999998765322111 00111122223333344444444455556666666666666
Q ss_pred HHHhcC----CccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHH
Q 000497 361 QKCLYV----RLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAF-VSGLAITILLIP 434 (1460)
Q Consensus 361 ~K~L~l----~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~-l~g~~v~~~~~~ 434 (1460)
++.++. +...+++ ..|++.+.+++|++.+.+... .+..+...++.++.+++.++..+++.. ++.++.+++...
T Consensus 176 ~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~ 254 (659)
T TIGR00954 176 SKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGV 254 (659)
T ss_pred HHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 555543 3333333 579999999999999988554 456666777777777777776566643 333344455556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000497 435 VNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP- 513 (1460)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~- 513 (1460)
+..++.+++.+..++..+..++-.+..+|.++|+++||+|+.|+...+++++.-++-.+...+.....+....+.....
T Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 334 (659)
T TIGR00954 255 VLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAK 334 (659)
T ss_pred HHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 6777888888999999999999999999999999999999999988888877666556666665555554444432222
Q ss_pred ---HHHHHHHHHHHHHh-C----CCCCHhHHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCch
Q 000497 514 ---TLFSLFTFGLFALM-G----HQLDAAMVFT-C---LALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH 581 (1460)
Q Consensus 514 ---~~~~~~~f~~~~~~-~----~~Lt~~~~ft-~---l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~ 581 (1460)
..+..+..+...+. . +.+|.+..+. + ..++..+..|+..+...+..+.++.++.+||.++++.++..+
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~ 414 (659)
T TIGR00954 335 YTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVK 414 (659)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12222223332222 2 5788887554 2 334677799999999999999999999999999996432110
Q ss_pred hhh-hhcCCCC-----------cccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCC
Q 000497 582 ELE-QAANSPS-----------YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGS 649 (1460)
Q Consensus 582 ~~~-~~~~~~~-----------~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~Gs 649 (1460)
... .....+. ....+..........++++|++|.|+.+ +++|+|+||++++||.++|+|||||
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-----~~il~~isl~i~~Ge~~~IvG~nGs 489 (659)
T TIGR00954 415 SGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-----DVLIESLSFEVPSGNHLLICGPNGC 489 (659)
T ss_pred cccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-----CeeeecceEEECCCCEEEEECCCCC
Confidence 000 0000000 0000000011123469999999988632 2359999999999999999999999
Q ss_pred cHHHHHHHHhcCccCCCeEEEEeC--cEEEEcCCCCCCCccHHHHHccCC--------CCChHHHHHHHHHhcchHHHhh
Q 000497 650 GKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPWILSGTIRDNILFGK--------NYDPQSYSETLKACTLDVDISL 719 (1460)
Q Consensus 650 GKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~p~l~~~ti~~nI~~g~--------~~~~~~~~~v~~~~~l~~di~~ 719 (1460)
|||||+++|+|+++|++|+|.+++ .++||+|+|+++++|++|||.++. ..++++..++++.+++++.++.
T Consensus 490 GKSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~ 569 (659)
T TIGR00954 490 GKSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER 569 (659)
T ss_pred CHHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh
Confidence 999999999999999999998864 699999999999999999999874 2456677889999999887777
Q ss_pred ccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh
Q 000497 720 MVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS 799 (1460)
Q Consensus 720 ~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~ 799 (1460)
|.|++|..+ .+.+||||||||++||||++++|+++|||||||+||+++++.+.+.+ .. .++|+|++||+++.++
T Consensus 570 -~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l-~~---~~~tvI~isH~~~~~~ 643 (659)
T TIGR00954 570 -EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLC-RE---FGITLFSVSHRKSLWK 643 (659)
T ss_pred -cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHH-HH---cCCEEEEEeCchHHHH
Confidence 999999876 56799999999999999999999999999999999999999888763 22 3789999999999999
Q ss_pred cCCEEEEEeC
Q 000497 800 AADMVVVMDK 809 (1460)
Q Consensus 800 ~ad~i~~l~~ 809 (1460)
.||+|++|+.
T Consensus 644 ~~d~il~l~~ 653 (659)
T TIGR00954 644 YHEYLLYMDG 653 (659)
T ss_pred hCCEEEEEeC
Confidence 9999999973
No 101
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-51 Score=461.40 Aligned_cols=466 Identities=20% Similarity=0.257 Sum_probs=356.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000497 348 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYLLYTQVKFAFVSGL 426 (1460)
Q Consensus 348 ~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~ 426 (1460)
+......+.-..|.|++.|+.....+..+|.+..-+.--..-|....++ +..+....+++++++.++++..||......
T Consensus 10 ~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~t 89 (497)
T COG5265 10 GQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALTT 89 (497)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHHH
Confidence 3334445666788899988887766666776655554444445554443 344556678899999999999998776655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 427 AITILLIPVNKWIANLIANATEKMMKQKD-ERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 505 (1460)
Q Consensus 427 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d-~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 505 (1460)
++.+++..+-.+...--+...++.|...| +......+.|-+-.++|.||-|+.+..+..+..+..-+...|...-..+.
T Consensus 90 ~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~L 169 (497)
T COG5265 90 LVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVL 169 (497)
T ss_pred HHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHH
Confidence 55555543333333222333344444444 45566779999999999999999888777665443333322222222222
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhh
Q 000497 506 VFFWAT--TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHEL 583 (1460)
Q Consensus 506 ~~~~~~--~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~ 583 (1460)
++.... ...+....+.+...+..+.+|.+...-.-++...+..|++.+......+-+++.-++++.+.+..+-.....
T Consensus 170 n~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~ 249 (497)
T COG5265 170 NFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDA 249 (497)
T ss_pred HHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccC
Confidence 211110 011122233344445678999999999999999999999999999999999999999998888654211111
Q ss_pred hhhcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc
Q 000497 584 EQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM 663 (1460)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~ 663 (1460)
.. .+.. .+.....+.|++++|.|.++ +++|+|+||++++|+.++|||++|+||||++++|.++|+
T Consensus 250 pd---a~~L-------~~~~~g~v~F~~V~F~y~~~-----r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD 314 (497)
T COG5265 250 PD---APPL-------WPVRLGAVAFINVSFAYDPR-----RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYD 314 (497)
T ss_pred CC---Cccc-------cccccceEEEEEEEeecccc-----chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhC
Confidence 00 1100 00234679999999999754 456999999999999999999999999999999999999
Q ss_pred CCCeEEEEeC-------------cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCccccc
Q 000497 664 LTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIG 729 (1460)
Q Consensus 664 ~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg 729 (1460)
+.+|.|.++| .||.|||+..|||+|+..||.+|++ ..++...++.++.++...|+.+|+|++|.||
T Consensus 315 ~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vg 394 (497)
T COG5265 315 VNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVG 394 (497)
T ss_pred CcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccc
Confidence 9999999997 4999999999999999999999986 4667888999999999999999999999999
Q ss_pred CCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeC
Q 000497 730 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 809 (1460)
Q Consensus 730 ~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~ 809 (1460)
|+|-.||||+|||||+||++.++|+|++|||+|||||.+|++.|... +.. ..+|+|.+++.||++.+-.||+|++|++
T Consensus 395 erglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~-l~~-~~~~rttlviahrlsti~~adeiivl~~ 472 (497)
T COG5265 395 ERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAA-LRE-VSAGRTTLVIAHRLSTIIDADEIIVLDN 472 (497)
T ss_pred hheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHH-HHH-HhCCCeEEEEeehhhhccCCceEEEeeC
Confidence 99999999999999999999999999999999999999999998776 433 5689999999999999999999999999
Q ss_pred CeEEEecCHHHHHhccccCcc
Q 000497 810 GQVKWIGSSADLAVSLYSGFW 830 (1460)
Q Consensus 810 G~i~~~g~~~~l~~~~~~~~~ 830 (1460)
|+|+|.|+|+||++.++.+.+
T Consensus 473 g~i~erg~h~~ll~~~g~ya~ 493 (497)
T COG5265 473 GRIVERGTHEELLAAGGLYAE 493 (497)
T ss_pred CEEEecCcHHHHHHcCChHHH
Confidence 999999999999988766543
No 102
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.1e-52 Score=478.17 Aligned_cols=236 Identities=34% Similarity=0.623 Sum_probs=225.9
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
|.|+|+|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|.+||.|+..++...+|+++
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999997656679999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1302 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1302 ~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+||||+|.+|++|+++|+++++..++++++++++.+++.++++.+ ++++.++++|.+||+|||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999988777889999999999999999987 999999999999999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHhhC
Q 000497 1380 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1459 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1459 (1460)
|||||||++||+++++.+++.|++.+++||||+||||++++..||||++|++|+++|.|+|++|++++ +.|++++++++
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~-~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEK-SHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCc-HHHHHHHhhcc
Confidence 99999999999999999999999888899999999999999999999999999999999999999965 79999998765
No 103
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.5e-50 Score=466.90 Aligned_cols=446 Identities=26% Similarity=0.382 Sum_probs=342.0
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..+++++.+=.|+. -.+++||||++++||+.++.|.||+|||||++.|.|.|+|++|+|.++|
T Consensus 3 ~~l~~~~itK~f~~------~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA 76 (501)
T COG3845 3 PALEMRGITKRFPG------VVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDA 76 (501)
T ss_pred ceEEEeccEEEcCC------EEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHH
Confidence 46788888877762 2459999999999999999999999999999999999999999999998
Q ss_pred ---cEEEEcCCCCCCCc-cHHHHHccCCCC------C----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000497 674 ---SIAYVPQVPWILSG-TIRDNILFGKNY------D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 739 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~------~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQ 739 (1460)
.||.|.|++-|++. ||.|||..|.+- | .++.++..+.++|+-|.+ ++...||=||
T Consensus 77 ~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~-----------~~V~dLsVG~ 145 (501)
T COG3845 77 IRLGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPD-----------AKVADLSVGE 145 (501)
T ss_pred HHcCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCcc-----------ceeecCCcch
Confidence 49999999998876 999999998753 2 345666777777766543 3445899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCH
Q 000497 740 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 818 (1460)
Q Consensus 740 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~ 818 (1460)
||||.|-+|||++|++||||||||.|-|...+++|+. +......|+|||+|||+++++.. ||++-||++|+++.. .
T Consensus 146 qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~-l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt--~ 222 (501)
T COG3845 146 QQRVEILKALYRGARLLILDEPTAVLTPQEADELFEI-LRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGT--V 222 (501)
T ss_pred hHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEee--e
Confidence 9999999999999999999999999999999999987 33325568999999999998776 999999999997532 1
Q ss_pred HHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcccchhHHHHHHhhhhh
Q 000497 819 ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG 898 (1460)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g 898 (1460)
+... +. +. +|-
T Consensus 223 ~~~~--------------------------------------~~-------t~-----~el------------------- 233 (501)
T COG3845 223 DPVA--------------------------------------ET-------TE-----EEL------------------- 233 (501)
T ss_pred cCCC--------------------------------------CC-------CH-----HHH-------------------
Confidence 1000 00 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 899 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 978 (1460)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ 978 (1460)
.- ++
T Consensus 234 ---------a~-lM------------------------------------------------------------------ 237 (501)
T COG3845 234 ---------AE-LM------------------------------------------------------------------ 237 (501)
T ss_pred ---------HH-Hh------------------------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 979 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1058 (1460)
Q Consensus 979 ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~ 1058 (1460)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1059 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII 1138 (1460)
Q Consensus 1059 ~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~ 1138 (1460)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCC
Q 000497 1139 SFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDW 1218 (1460)
Q Consensus 1139 ~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~w 1218 (1460)
+ +. .. . .+.+ .++.-
T Consensus 238 -------v-G~--~v--~----------------------------------------------~~~~-------~~~~~ 252 (501)
T COG3845 238 -------V-GR--EV--V----------------------------------------------LRVV-------KPPST 252 (501)
T ss_pred -------c-CC--cc--c----------------------------------------------cccc-------cCCCC
Confidence 0 00 00 0 0000 01111
Q ss_pred CCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeC-CCCChHHH
Q 000497 1219 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNI-INTPVRDL 1297 (1460)
Q Consensus 1219 p~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di-~~i~~~~l 1297 (1460)
|..-.++++|++..-+.+ -+.+++|||+|++||.+||.|-.|.|-+-|+.+|.|+..|.+|+|.++|.|+ ...+....
T Consensus 253 pg~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~ 331 (501)
T COG3845 253 PGEVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRER 331 (501)
T ss_pred CCCeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHH
Confidence 334468999999865433 3689999999999999999999999999999999999999999999999997 66677766
Q ss_pred hc-ccEEEeCCCc----cCCccHHHhcCcCCCCCh-----H-HHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHH
Q 000497 1298 RG-RFAVVPQSPF----LFEGSLRDNLDPFHMNDD-----L-KIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQ 1365 (1460)
Q Consensus 1298 R~-~i~iVpQdp~----lf~gTIR~NLdp~~~~sd-----~-ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQ 1365 (1460)
|+ .+++||.|.. ..+-|+.||+-+.....+ - -=|+++++ ...+.++.++..+ .-.....+||||+.|
T Consensus 332 r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~-~a~~li~~fdVr~~~~~~~a~~LSGGNqQ 410 (501)
T COG3845 332 RRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRK-FARELIEEFDVRAPSPDAPARSLSGGNQQ 410 (501)
T ss_pred HhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHH-HHHHHHHHcCccCCCCCcchhhcCCccee
Confidence 65 5999999984 456799999854322111 0 00122221 1234455442211 111123479999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhH
Q 000497 1366 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1442 (1460)
Q Consensus 1366 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~e 1442 (1460)
++-+||-|.++|++||..+||-+||..+.+.|++.|.+.. +|+.|++|+-.|+.+.. ||||.||.+|+++...+|++
T Consensus 411 K~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 411 KLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred hhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceeccccccc
Confidence 9999999999999999999999999999999998887664 69999999999999875 89999999999998888776
No 104
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-49 Score=460.85 Aligned_cols=230 Identities=27% Similarity=0.389 Sum_probs=205.0
Q ss_pred CCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-----CCCceEEECCEeC
Q 000497 1215 SPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNI 1289 (1460)
Q Consensus 1215 ~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di 1289 (1460)
+.+||..|.|+|+|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.|||+|+
T Consensus 72 ~~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i 151 (329)
T PRK14257 72 KEDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNT 151 (329)
T ss_pred cCCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEc
Confidence 34699999999999999997555679999999999999999999999999999999999997 5799999999999
Q ss_pred C--CCChHHHhcccEEEeCCCccCCccHHHhcCcC---CCCChHHH-----HHHHHHhcHHHHHHhCCCchhhhcCCCCC
Q 000497 1290 I--NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF---HMNDDLKI-----WSVLEKCHVKEEVEAVGLETFVKESGISF 1359 (1460)
Q Consensus 1290 ~--~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~---~~~sd~ei-----~~aL~~~~l~~~i~~lgLdt~v~e~G~~L 1359 (1460)
. .++...+|++++||||+|.+|++|+++|+++. ...++++. .++++.+++++ ++++.+++.|.+|
T Consensus 152 ~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----~l~~~~~~~~~~L 226 (329)
T PRK14257 152 RSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWD-----EVKDDLDKAGNAL 226 (329)
T ss_pred cccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcc-----hhhhhhhCCcccC
Confidence 7 45667899999999999999999999999843 23445544 34455555433 4567889999999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEc
Q 000497 1360 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1360 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1438 (1460)
|||||||+|||||++++|+|||||||||+||+++.+.+++.|++.++++|+|+|||+++++.+ ||||+||++|+|+|.|
T Consensus 227 SgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g 306 (329)
T PRK14257 227 SGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAG 306 (329)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999998889999999999999998 9999999999999999
Q ss_pred ChhHHhccCCc
Q 000497 1439 NPQTLLQDECS 1449 (1460)
Q Consensus 1439 ~p~eLl~~~~~ 1449 (1460)
+|+++..++..
T Consensus 307 ~~~~l~~~~~~ 317 (329)
T PRK14257 307 ETKTIFIHPKN 317 (329)
T ss_pred CHHHHhcCCCc
Confidence 99999887653
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-45 Score=384.74 Aligned_cols=220 Identities=28% Similarity=0.434 Sum_probs=190.1
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCC-CCChHHHhccc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII-NTPVRDLRGRF 1301 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~-~i~~~~lR~~i 1301 (1460)
.|+++|++.+|+.. .||||||++|++||++.||||||||||||+++|.++-+|++|+|.|||.++. ..+...+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 48999999999753 6999999999999999999999999999999999999999999999998774 33789999999
Q ss_pred EEEeCCCccCCc-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
|+|+|+..||+- |+-||+.... ..+.+|-.+ + ..+.++..||......-...|||||+||++|||||.-+
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~---~--A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~ 154 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEARE---K--ALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMD 154 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHH---H--HHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCC
Confidence 999999999987 9999986431 122222111 1 12233444666666777789999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCc
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1449 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~ 1449 (1460)
|+|+++|||||+||+|.-..+.+++++.. .|-|+|+|||.+...++ +|||+.||+|+|+|.|+|+++..++.+
T Consensus 155 P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~~ 229 (240)
T COG1126 155 PKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPKS 229 (240)
T ss_pred CCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCCC
Confidence 99999999999999999999999998875 58899999999999988 599999999999999999999998764
No 106
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-45 Score=399.61 Aligned_cols=220 Identities=29% Similarity=0.440 Sum_probs=190.9
Q ss_pred EEEEEEEEEecCC---CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCC---hHHH
Q 000497 1224 IEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDL 1297 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---~~~l 1297 (1460)
|+++||++.|+.. ...+|+||||+|++||..||+|+||||||||++++.++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999763 346899999999999999999999999999999999999999999999999988776 5667
Q ss_pred hcccEEEeCCCccCC-ccHHHhcCcC---CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000497 1298 RGRFAVVPQSPFLFE-GSLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1298 R~~i~iVpQdp~lf~-gTIR~NLdp~---~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1373 (1460)
|++|++|+|++-|++ -|+.+|+.+- ...+.+|+.+- ..+.++-.||....+.-..+||||||||++|||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~R-----V~elLelVgL~dk~~~yP~qLSGGQKQRVaIARAL 156 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQR-----VAELLELVGLSDKADRYPAQLSGGQKQRVAIARAL 156 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHH-----HHHHHHHcCChhhhccCchhcCcchhhHHHHHHHH
Confidence 889999999999998 5999999642 12344444321 12233333777777888889999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCC
Q 000497 1374 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1448 (1460)
Q Consensus 1374 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1448 (1460)
..+|+||+.|||||+||++|.+.|.+.|++.- -|-|+++|||.++.+++ ||||.||++|+|+|.|+..++..+|.
T Consensus 157 a~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~Pk 234 (339)
T COG1135 157 ANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANPK 234 (339)
T ss_pred hcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCcc
Confidence 99999999999999999999999999987653 38899999999999987 99999999999999999999998874
No 107
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-44 Score=374.76 Aligned_cols=220 Identities=30% Similarity=0.430 Sum_probs=199.6
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCC-----ceEEECCEeCCC--CCh
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG-----GQILVDGLNIIN--TPV 1294 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~-----G~I~IDG~di~~--i~~ 1294 (1460)
..++++|+++.|.. ..+|+|||++|++++.+|++|||||||||++++|.|+.+... |+|.+||.||-+ ++.
T Consensus 6 ~~~~~~~l~~yYg~--~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGD--KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECc--hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 46899999999974 469999999999999999999999999999999999999876 999999999965 679
Q ss_pred HHHhcccEEEeCCCccCCccHHHhcCcCCC----C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1295 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1295 ~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~----~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
..||+++|+|.|.|--|+.||+||+.++-. . -|+.+.++|+++.||+.++. .+.+.+..|||||+|||
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-----rL~~sa~~LSGGQQQRL 158 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-----RLHKSALGLSGGQQQRL 158 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-----HhhCCccCCChhHHHHH
Confidence 999999999999999999999999976521 1 24557889999999998864 45566778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
||||||.-+|+||+||||||+||+.+...|.+.|.+..++.|||+|||.+.-... +|+...+-.|+++|+|+-+++..+
T Consensus 159 cIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~~ 238 (253)
T COG1117 159 CIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFTN 238 (253)
T ss_pred HHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhcC
Confidence 9999999999999999999999999999999999998899999999999997655 699999999999999999999887
Q ss_pred CC
Q 000497 1447 EC 1448 (1460)
Q Consensus 1447 ~~ 1448 (1460)
+.
T Consensus 239 P~ 240 (253)
T COG1117 239 PK 240 (253)
T ss_pred cc
Confidence 74
No 108
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1e-43 Score=406.40 Aligned_cols=238 Identities=44% Similarity=0.744 Sum_probs=221.4
Q ss_pred CCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhc
Q 000497 1220 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRG 1299 (1460)
Q Consensus 1220 ~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~ 1299 (1460)
..|.|+++|++++|+....++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 46789999999999754356999999999999999999999999999999999999999999999999999999889999
Q ss_pred ccEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1300 RFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1300 ~i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
+++++||+|.+|++|+++|+++.....+++++++++..++.+.++.+ |+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876544566788899999999988888 9999999999999999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHh
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1457 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~ 1457 (1460)
++|||||||++||+++.+.+.+.+++..+++|+|++||+++.+..||||++|++|++++.|+++++.+.+++.|+.++..
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 255 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVRT 255 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHhc
Confidence 99999999999999999999999988767899999999999999999999999999999999999998877889988764
No 109
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=2.5e-43 Score=407.08 Aligned_cols=197 Identities=24% Similarity=0.352 Sum_probs=157.2
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|.|+||+|+|.++ +..+++++|-|.++++|++|||||+|||||++++.+.+.|..|.|.-.- .-+++
T Consensus 389 vi~~~nv~F~y~~~-~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~-----------H~~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDN-PMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHS-----------HNKLP 456 (614)
T ss_pred eEEEeccccCCCCc-chhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccc-----------cccch
Confidence 59999999999765 4799999999999999999999999999999999999999999885432 12333
Q ss_pred EEeCC---CccCCccHHHhcCc-CC-CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1303 VVPQS---PFLFEGSLRDNLDP-FH-MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1303 iVpQd---p~lf~gTIR~NLdp-~~-~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
+--|. -.-++-|.-+|+.| +. ....+++...|.++||.... .+.++ ++||+|||.|+++||.+++.|
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~----q~~p~----~~LS~Gqr~rVlFa~l~~kqP 528 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDA----QVVPM----SQLSDGQRRRVLFARLAVKQP 528 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccc----cccch----hhcccccchhHHHHHHHhcCC
Confidence 33443 23456666677644 22 24456777788888765321 12222 379999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEE-cChh
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQ-GNPQ 1441 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~-G~p~ 1441 (1460)
.||+|||||++||.+|-....++|.+. ..+||+|+|+...|.. +++|++.++|.+... |.+.
T Consensus 529 ~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~ 592 (614)
T KOG0927|consen 529 HLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIE 592 (614)
T ss_pred cEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeecCccHH
Confidence 999999999999999999999999754 4589999999999987 699999999998754 4443
No 110
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-43 Score=375.04 Aligned_cols=222 Identities=31% Similarity=0.464 Sum_probs=193.5
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+|+|||++|.+ ..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++|||
T Consensus 2 I~~~nvsk~y~~--~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGN--KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCC--ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 799999999973 469999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCccCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCch--hhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1304 VPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET--FVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt--~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
|-|.--||+- ||.+|+..-. ..+.+++.+- ..+.++..|||. ....-...|||||+||+.+||||..+|
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r-----~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP 154 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKR-----ADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADP 154 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHH-----HHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCC
Confidence 9999999986 9999985321 2344444332 233333347775 345557789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHhccCCcHHH
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQDECSVFS 1452 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1452 (1460)
+|++||||.++||+-|...+|+-+.+.- -++|+|+|||++++.. -+|||.||++|+|+.+|+|+++++++...|-
T Consensus 155 ~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~FV 232 (309)
T COG1125 155 PILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDFV 232 (309)
T ss_pred CeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHHHH
Confidence 9999999999999999999999886653 2899999999999764 5899999999999999999999999876664
No 111
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-43 Score=415.60 Aligned_cols=262 Identities=22% Similarity=0.301 Sum_probs=217.3
Q ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEE
Q 000497 529 HQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVI 608 (1460)
Q Consensus 529 ~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 608 (1460)
+.++++++|+++++++.+..|+..+|..... .+|+++|+..++.+..... .. .+....++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~--~~-----------~~~~~~i~ 82 (329)
T PRK14257 23 NELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLK--ED-----------FNHANVFE 82 (329)
T ss_pred chhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhccccccccccccc--CC-----------CCcCceEE
Confidence 4789999999999999999999887765433 5699999876653221000 00 12345799
Q ss_pred EEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEeC----------
Q 000497 609 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---------- 673 (1460)
Q Consensus 609 ~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~---------- 673 (1460)
++|+++.|... . +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|
T Consensus 83 ~~nls~~y~~~-~---~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~ 158 (329)
T PRK14257 83 IRNFNFWYMNR-T---KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISS 158 (329)
T ss_pred EEeeEEEecCC-C---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 99999999642 1 235999999999999999999999999999999999996 5799987643
Q ss_pred -----cEEEEcCCCCCCCccHHHHHccCCCCC----hH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000497 674 -----SIAYVPQVPWILSGTIRDNILFGKNYD----PQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 740 (1460)
Q Consensus 674 -----~i~y~~Q~p~l~~~ti~~nI~~g~~~~----~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQk 740 (1460)
.++||||+||+|++||+|||.|+..++ ++ .|.++++.|+|..+++ +.++++|.+||||||
T Consensus 159 ~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~-------~~~~~~~~~LSgGqk 231 (329)
T PRK14257 159 LELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVK-------DDLDKAGNALSGGQQ 231 (329)
T ss_pred HhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhh-------hhhhCCcccCCHHHH
Confidence 599999999999999999999875322 22 3677888888866553 678999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHH
Q 000497 741 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 819 (1460)
Q Consensus 741 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~ 819 (1460)
|||+||||++++|+|+|||||||+||+++.+++.+. +.. +.+++|+|+|||+++++.. ||+|++|++|+|++.|+++
T Consensus 232 qRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~-i~~-l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~ 309 (329)
T PRK14257 232 QRLCIARAIALEPEVLLMDEPTSALDPIATAKIEEL-ILE-LKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETK 309 (329)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999986554 554 5567899999999999887 9999999999999999999
Q ss_pred HHHh
Q 000497 820 DLAV 823 (1460)
Q Consensus 820 ~l~~ 823 (1460)
++..
T Consensus 310 ~l~~ 313 (329)
T PRK14257 310 TIFI 313 (329)
T ss_pred HHhc
Confidence 9864
No 112
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1e-42 Score=394.03 Aligned_cols=232 Identities=35% Similarity=0.573 Sum_probs=211.9
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999996544579999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EeCCCccCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000497 1304 VPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1380 (1460)
Q Consensus 1304 VpQdp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1380 (1460)
+||++.+|+.|+++|+..... .+.+++.++++..++.+.++.+ |+++..+..+.+||||||||++||||++++|+++
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 999999999999999976432 3455677778888888888887 8888888888999999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHH
Q 000497 1381 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVR 1456 (1460)
Q Consensus 1381 lLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~ 1456 (1460)
||||||++||..+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++++++++. +.|+.+++
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~-~~~~~~~~ 235 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAEN-GLYAYLYQ 235 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhcc-ChHHHHHh
Confidence 9999999999999999999999877789999999999999889999999999999999999999864 57877765
No 113
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.3e-42 Score=386.96 Aligned_cols=219 Identities=53% Similarity=0.912 Sum_probs=205.6
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
|.++++|++++|+....++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 56899999999975445799999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1302 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1302 ~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+|+||+|.+|++|+++|++++....++++.++++..++.+.+..+ |+++..++.+.+||+|||||++||||++++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999987666777889999999999998876 999999888999999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcCh
Q 000497 1380 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNP 1440 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p 1440 (1460)
+||||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999987778999999999999999999999999999998864
No 114
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.1e-41 Score=377.19 Aligned_cols=207 Identities=46% Similarity=0.864 Sum_probs=187.5
Q ss_pred CCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH
Q 000497 1218 WPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL 1297 (1460)
Q Consensus 1218 wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l 1297 (1460)
||..+.++++|++++|+....++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 89999999999999997543469999999999999999999999999999999999999999999999999998888888
Q ss_pred hcccEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1298 RGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1298 R~~i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
|++++|+||+|.+|++|+++|+..+...+++++.++++ +++....||+||+||++||||++++|
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~----------------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR----------------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh----------------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999998665444444433332 24556789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcCh
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNP 1440 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p 1440 (1460)
+|+||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+|
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999987778999999999999988999999999999998875
No 115
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-41 Score=398.49 Aligned_cols=223 Identities=24% Similarity=0.382 Sum_probs=190.4
Q ss_pred CCccEEEEEEEEEecCC---CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCC----
Q 000497 1220 FQGLIEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT---- 1292 (1460)
Q Consensus 1220 ~~g~I~f~nvs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i---- 1292 (1460)
....|+++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 34469999999999643 23699999999999999999999999999999999999999999999999998653
Q ss_pred ------------ChHHHhcccEEEeCCC--ccCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCc-hhhhc
Q 000497 1293 ------------PVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKE 1354 (1460)
Q Consensus 1293 ------------~~~~lR~~i~iVpQdp--~lf~gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e 1354 (1460)
+...+|+++++|+|+| .+|++|+++|+.+... .++++. .++ ..+.++.+|++ ...++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~---~~~--~~~~l~~~gL~~~~~~~ 172 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEA---KKL--AKFYLNKMGLDDSYLER 172 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHH---HHH--HHHHHHHcCCChhHhcC
Confidence 3567899999999998 6899999999965421 223322 222 23455666886 56788
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEEeCC
Q 000497 1355 SGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHG 1432 (1460)
Q Consensus 1355 ~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlVl~~G 1432 (1460)
.+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 888999999999999999999999999999999999999999999998653 5899999999999875 59999999999
Q ss_pred eEEEEcChhHHhccC
Q 000497 1433 HLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1433 ~IvE~G~p~eLl~~~ 1447 (1460)
++++.|+|+++.+++
T Consensus 253 ~i~~~g~~~~~~~~~ 267 (320)
T PRK13631 253 KILKTGTPYEIFTDQ 267 (320)
T ss_pred EEEEeCCHHHHhcCH
Confidence 999999999887643
No 116
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.5e-41 Score=398.92 Aligned_cols=223 Identities=25% Similarity=0.388 Sum_probs=188.4
Q ss_pred EEEEEEEEEecCC--CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHH---Hh
Q 000497 1224 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1298 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1298 (1460)
|+++||+++|+.+ ..++|+||||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cccEEEeCCCccCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000497 1299 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1374 (1460)
Q Consensus 1299 ~~i~iVpQdp~lf~-gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1374 (1460)
++|++|||++.+|+ .|+++|+.... ..+++++.+ ...+.++.+|++.........||||||||++|||||+
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~v~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IARAL~ 156 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR-----KVTELLALVGLGDKHDSYPSNLSGGQKQRVAIARALA 156 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHH
Confidence 89999999999996 69999996421 122222221 1123333346655556667789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHH
Q 000497 1375 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1451 (1460)
Q Consensus 1375 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1451 (1460)
.+|+||+||||||+||+++.+.+.+.|++..+ +.|||+|||+++.+.. ||||++|++|+|+|.|++++++.++...+
T Consensus 157 ~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~~~~ 236 (343)
T TIGR02314 157 SNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPKTPL 236 (343)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCcHH
Confidence 99999999999999999999999999988653 7999999999999976 89999999999999999999987664433
No 117
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-41 Score=382.11 Aligned_cols=229 Identities=34% Similarity=0.582 Sum_probs=207.9
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++|++++|+....++++|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999996543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EeCCCccCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000497 1304 VPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1380 (1460)
Q Consensus 1304 VpQdp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1380 (1460)
+||+|.+|+.|++||+..+.. ...+++.+.++..++.+.++.+ |+++..+....+||+|||||++||||++++|+++
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999976533 3445667777888888888887 8888888888899999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHH
Q 000497 1381 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSS 1453 (1460)
Q Consensus 1381 lLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~ 1453 (1460)
||||||++||..+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|+++++.++. +.|+.
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~-~~~~~ 232 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQG-GVYAK 232 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcC-cchhh
Confidence 9999999999999999999999887889999999999999899999999999999999999998754 45544
No 118
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.6e-41 Score=421.76 Aligned_cols=199 Identities=25% Similarity=0.338 Sum_probs=163.4
Q ss_pred CCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC--CCCceEEECCEeCCCCChHHHhcccEEEeCCCccC-C
Q 000497 1236 SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--ICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF-E 1312 (1460)
Q Consensus 1236 ~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf-~ 1312 (1460)
+....|+|||=-++||-..|++|.||||||||++.|.+-.. ..+|+|+|||.+..+ +..++++|||.|++.-. .
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 34568999999999999999999999999999999997653 247999999998765 78899999999988644 4
Q ss_pred ccHHHhcCcC------CCCChHH----HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC-CEEE
Q 000497 1313 GSLRDNLDPF------HMNDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS-KVLC 1381 (1460)
Q Consensus 1313 gTIR~NLdp~------~~~sd~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~-~ILl 1381 (1460)
-||||-|.+. .+.+++| +.++++-.+|.+.- |..||.-|..||..||.||.||=-|..|| .||.
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-----daiVG~~G~GLs~eQRKrLTIgVELvA~P~~ilF 953 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-----DALVGLPGSGLSTEQRKRLTIGVELVANPSSILF 953 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-----hhhccCCCCCCCHHHhceeeEEEEEecCCceeEE
Confidence 5999998542 2334443 33444444444332 45678778889999999999999999999 8999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh--HhhcCEEEEEe-CCeEEEEcChhH
Q 000497 1382 LDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST--VLNMDEILILD-HGHLVEQGNPQT 1442 (1460)
Q Consensus 1382 LDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~t--i~~~DrIlVl~-~G~IvE~G~p~e 1442 (1460)
||||||+||+++...|.+.+|+.. .|+||++.-|+++. .+.+|+++.|+ .|+.|.+|++.+
T Consensus 954 LDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 954 LDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred ecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 999999999999999999999875 69999999999985 35689999996 489999988654
No 119
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-41 Score=378.71 Aligned_cols=225 Identities=40% Similarity=0.652 Sum_probs=206.8
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
|.|+++|++++|+. ..++++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDE-KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCC-CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 46899999999963 23699999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEeCCCccCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1302 AVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1302 ~iVpQdp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
+|+||+|.+|++|+++|+..+.. ..++++.++++.+++.+.++.+ |+++.++....+||+|||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999976543 3456778888889999888887 89999988888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
++||||||++||..+.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|+++++.++.
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~~ 228 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAKK 228 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhhC
Confidence 999999999999999999999998876789999999999999889999999999999999999887653
No 120
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.3e-42 Score=355.52 Aligned_cols=199 Identities=28% Similarity=0.369 Sum_probs=172.3
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
|+++|++-+|.. ..+|+|||+++++||.++|+|||||||||||++|.|+-+|++|+|.++|
T Consensus 3 i~i~~l~K~fg~------~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R 76 (240)
T COG1126 3 IEIKNLSKSFGD------KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLR 76 (240)
T ss_pred EEEEeeeEEeCC------eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHH
Confidence 678888776653 2359999999999999999999999999999999999999999999998
Q ss_pred -cEEEEcCCCCCCCc-cHHHHHccCC----CCC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000497 674 -SIAYVPQVPWILSG-TIRDNILFGK----NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 743 (1460)
Q Consensus 674 -~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv 743 (1460)
.+|+|+|+..||.- ||.|||..+. ..+ +++-.+.++..+|.+..+..|. .|||||||||
T Consensus 77 ~~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQRV 145 (240)
T COG1126 77 RKVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPA-----------QLSGGQQQRV 145 (240)
T ss_pred HhcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----------ccCcHHHHHH
Confidence 47899999999976 9999999863 122 2455567778888877777765 8999999999
Q ss_pred HHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHH
Q 000497 744 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 822 (1460)
Q Consensus 744 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~ 822 (1460)
||||||.-+|+++|+|||||||||+....+++- +......|.|.|+|||.+.+.+. ||||+.|++|+|+++|+++++-
T Consensus 146 AIARALaM~P~vmLFDEPTSALDPElv~EVL~v-m~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f 224 (240)
T COG1126 146 AIARALAMDPKVMLFDEPTSALDPELVGEVLDV-MKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFF 224 (240)
T ss_pred HHHHHHcCCCCEEeecCCcccCCHHHHHHHHHH-HHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHh
Confidence 999999999999999999999999999888875 33324467899999999999986 9999999999999999999875
Q ss_pred h
Q 000497 823 V 823 (1460)
Q Consensus 823 ~ 823 (1460)
.
T Consensus 225 ~ 225 (240)
T COG1126 225 D 225 (240)
T ss_pred c
Confidence 4
No 121
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.4e-41 Score=387.55 Aligned_cols=192 Identities=21% Similarity=0.297 Sum_probs=161.0
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcc
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1300 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1300 (1460)
...+++.+|+|.|.++.++.+++++++++.-+++++||++|+||||+++++.+-.+|..|.+-+.+ |.+
T Consensus 360 ~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 346999999999999877899999999999999999999999999999999999999999988765 789
Q ss_pred cEEEeCCCccC-CccHH-----HhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCC-CCCChhHHHHHHHHHHH
Q 000497 1301 FAVVPQSPFLF-EGSLR-----DNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESG-ISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1301 i~iVpQdp~lf-~gTIR-----~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G-~~LSgGQrQrl~LARAL 1373 (1460)
|++-.|.-+=| +-.+- +-..|+ .+++|+++.|... |++..+...+ ..||||||-|+++|-..
T Consensus 429 i~~f~Qhhvd~l~~~v~~vd~~~~~~pG--~~~ee~r~hl~~~---------Gl~g~la~~si~~LSGGQKsrvafA~~~ 497 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNAVDFMEKSFPG--KTEEEIRRHLGSF---------GLSGELALQSIASLSGGQKSRVAFAACT 497 (582)
T ss_pred ecchhHhhhhHHHHHhHHHHHHHHhCCC--CCHHHHHHHHHhc---------CCCchhhhccccccCCcchhHHHHHHHh
Confidence 99999976532 21111 111222 2778887766554 6666665544 46999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEE
Q 000497 1374 LKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVE 1436 (1460)
Q Consensus 1374 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE 1436 (1460)
..+|.+|||||||..||.++-..+-++|+. |+| -||+|+|+.+.+.. |+.++|.++|+|.-
T Consensus 498 ~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~-F~G-GVv~VSHd~~fi~~~c~E~Wvve~g~vt~ 559 (582)
T KOG0062|consen 498 WNNPHLLVLDEPTNHLDRDSLGALAKALKN-FNG-GVVLVSHDEEFISSLCKELWVVEDGKVTP 559 (582)
T ss_pred cCCCcEEEecCCCccccHHHHHHHHHHHHh-cCC-cEEEEECcHHHHhhcCceeEEEcCCcEEe
Confidence 999999999999999999999999999975 443 69999999999986 89999999999975
No 122
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.3e-41 Score=377.89 Aligned_cols=232 Identities=37% Similarity=0.639 Sum_probs=211.2
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999633 469999999999999999999999999999999999999999999999999999888889999999
Q ss_pred EeCCCccCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000497 1304 VPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1380 (1460)
Q Consensus 1304 VpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1380 (1460)
+||+|.+|++|+++|+.... ..+++++.++++.+++.+.+..+ |+++.+.....+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999997643 34566778888888998888887 8999998888899999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHHh
Q 000497 1381 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1457 (1460)
Q Consensus 1381 lLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~ 1457 (1460)
||||||++||+++.+.+.+.|++..++.|+|+++|+++.+..||++++|++|++++.|+++++.++ .+.|+.++..
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~~ 235 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWKA 235 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHhc
Confidence 999999999999999999999877668899999999999999999999999999999999999875 4577776653
No 123
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.8e-41 Score=373.87 Aligned_cols=213 Identities=29% Similarity=0.449 Sum_probs=186.7
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.++++|++++|+ ..++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.+||.|+.+++..++-++++
T Consensus 2 ~L~~~~ls~~y~--~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYG--GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEEC--CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 478999999997 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCcc-CCccHHHhcCcCC--------CCC--hH-HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000497 1303 VVPQSPFL-FEGSLRDNLDPFH--------MND--DL-KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1370 (1460)
Q Consensus 1303 iVpQdp~l-f~gTIR~NLdp~~--------~~s--d~-ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1370 (1460)
||||++.. |.-||+|-+..++ ..+ |+ .+.++|+.+++.++.+ ..-..||||||||+.||
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~---------r~~~~LSGGerQrv~iA 150 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLAD---------RPVDELSGGERQRVLIA 150 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhc---------CcccccChhHHHHHHHH
Confidence 99999754 5559998774331 112 33 4667788887766543 23346999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhH-hhcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1371 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTV-LNMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1371 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti-~~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
|||.++|+||+||||||+||....-.+.+.+++.. ++.|+|+|.|+++.. +.||++++|++|+++..|+|+|.+..
T Consensus 151 rALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT~ 229 (258)
T COG1120 151 RALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLTE 229 (258)
T ss_pred HHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcCH
Confidence 99999999999999999999999999999998875 479999999999876 55899999999999999999999874
No 124
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-41 Score=369.71 Aligned_cols=210 Identities=29% Similarity=0.457 Sum_probs=183.8
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++|++++|... +||+||||+|++||.+||+||||||||||+++++|+++|++|+|.++|.+++.... +.+||
T Consensus 4 ~i~v~nl~v~y~~~--~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR--PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE--eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 59999999999755 49999999999999999999999999999999999999999999999998766443 57999
Q ss_pred EEeCCC---ccCCccHHHhcCcCCC-----------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000497 1303 VVPQSP---FLFEGSLRDNLDPFHM-----------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1368 (1460)
Q Consensus 1303 iVpQdp---~lf~gTIR~NLdp~~~-----------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1368 (1460)
||||.. .-|+-||+|-+..+.. .+.+++.+||++++++++. +-.++ .|||||+||+.
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-----~r~i~----~LSGGQ~QRV~ 149 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-----DRQIG----ELSGGQKQRVL 149 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-----CCccc----ccCcHHHHHHH
Confidence 999965 3588999999865421 1247889999999988764 33344 59999999999
Q ss_pred HHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC-CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1369 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1369 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~-~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
|||||+++|++|+|||||+++|+.++..|.+.|++..+ ||||++|+|+++.+.+ +|+|+.|. +++...|+|++.+..
T Consensus 150 lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~~~ 228 (254)
T COG1121 150 LARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVLTE 228 (254)
T ss_pred HHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhccCH
Confidence 99999999999999999999999999999999988764 9999999999999976 79999985 678899999999875
Q ss_pred C
Q 000497 1447 E 1447 (1460)
Q Consensus 1447 ~ 1447 (1460)
+
T Consensus 229 ~ 229 (254)
T COG1121 229 E 229 (254)
T ss_pred H
Confidence 4
No 125
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-41 Score=357.67 Aligned_cols=226 Identities=29% Similarity=0.458 Sum_probs=185.7
Q ss_pred cEEEEEEEEEecCCC--CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCC-hHHHhc
Q 000497 1223 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDLRG 1299 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~~lR~ 1299 (1460)
.++++|+++.|+... .++|+||||+|.+||.+||||+||||||||.++|.|+.+|++|+|.+||.++.... ....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999997542 25999999999999999999999999999999999999999999999998775543 346788
Q ss_pred ccEEEeCCCc--cCC-ccHHHhcC-cCCC----CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000497 1300 RFAVVPQSPF--LFE-GSLRDNLD-PFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1371 (1460)
Q Consensus 1300 ~i~iVpQdp~--lf~-gTIR~NLd-p~~~----~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1371 (1460)
.+.+|+|||. |=+ -||++-|. |... ....+++++|+.+||.+. ........||||||||+||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~--------~l~R~P~eLSGGQ~QRiaIAR 154 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPS--------FLDRRPHELSGGQRQRIAIAR 154 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHH--------HHhcCchhcChhHHHHHHHHH
Confidence 8999999996 222 26665552 2221 123456777777665443 234556679999999999999
Q ss_pred HHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCC
Q 000497 1372 ALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1448 (1460)
Q Consensus 1372 ALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1448 (1460)
||.-+|++||+|||||+||.-..+.|.+.+.+..+ +-|.|+|||+++.+.. ||||+||++|+++|.++-+++...+.
T Consensus 155 AL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~~~ 234 (252)
T COG1124 155 ALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSHPS 234 (252)
T ss_pred HhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcCCc
Confidence 99999999999999999999999999999987765 4499999999999986 89999999999999999999998755
Q ss_pred cHHHHHHH
Q 000497 1449 SVFSSFVR 1456 (1460)
Q Consensus 1449 ~~f~~l~~ 1456 (1460)
..|.+.+.
T Consensus 235 h~ytr~Ll 242 (252)
T COG1124 235 HPYTRELL 242 (252)
T ss_pred cHHHHHHH
Confidence 55655443
No 126
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.6e-41 Score=355.11 Aligned_cols=229 Identities=27% Similarity=0.444 Sum_probs=196.4
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HH
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DL 1297 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~l 1297 (1460)
+-.|++++|+++|.. ..|++||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.||.+++.+ .+
T Consensus 6 ~~~I~vr~v~~~fG~--~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 6 EPLIEVRGVTKSFGD--RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred cceEEEeeeeeecCC--EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 347999999999964 4699999999999999999999999999999999999999999999999999998864 56
Q ss_pred hcccEEEeCCCccCCc-cHHHhcCc-CCCC---ChHHHHHHHHHhcHHHHHHhCCCchh-hhcCCCCCChhHHHHHHHHH
Q 000497 1298 RGRFAVVPQSPFLFEG-SLRDNLDP-FHMN---DDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLICLAR 1371 (1460)
Q Consensus 1298 R~~i~iVpQdp~lf~g-TIR~NLdp-~~~~---sd~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQrl~LAR 1371 (1460)
|+++|++.|+.-||+. ||+||+.+ ..++ +++++.+. .. ..++..||... ...-.+.||||.+.|.+|||
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~l-v~----~KL~~VGL~~~~~~~~PsELSGGM~KRvaLAR 158 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIREL-VL----MKLELVGLRGAAADLYPSELSGGMRKRVALAR 158 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHH-HH----HHHHhcCCChhhhhhCchhhcchHHHHHHHHH
Confidence 9999999999999987 99999964 3333 34444331 11 12233377776 44456789999999999999
Q ss_pred HHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCC
Q 000497 1372 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1448 (1460)
Q Consensus 1372 ALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1448 (1460)
|+.-+|+|+++|||||+||+-+...+-+.|++.. -+.|+|+|||+++++.. ||||+++.+|+|+-.|+|+|+.+.++
T Consensus 159 AialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~sd~ 238 (263)
T COG1127 159 AIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLASDD 238 (263)
T ss_pred HHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhCCC
Confidence 9999999999999999999999999888887654 38999999999999987 69999999999999999999999888
Q ss_pred cHHHHHHH
Q 000497 1449 SVFSSFVR 1456 (1460)
Q Consensus 1449 ~~f~~l~~ 1456 (1460)
-..++.++
T Consensus 239 P~v~qf~~ 246 (263)
T COG1127 239 PWVRQFFN 246 (263)
T ss_pred HHHHHHhc
Confidence 77777664
No 127
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.3e-41 Score=382.78 Aligned_cols=221 Identities=29% Similarity=0.456 Sum_probs=192.9
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++||+.+|++.. +++|+||+|+.||.++++|||||||||++++|.|+.+|++|+|.|||.|++++++++ +.|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 589999999997543 999999999999999999999999999999999999999999999999999999975 7899
Q ss_pred EEeCCCccCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1303 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1303 iVpQdp~lf~g-TIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
+|+|+..||+. ||++|+.+.-. ...+|+.+..+ +..+.++++..+......||||||||++|||||.++|+
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~-----eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~ 153 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVK-----EVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPK 153 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHH-----HHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCC
Confidence 99999999987 99999986532 23344433222 23334477777788888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHHH
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1452 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1452 (1460)
+++||||.|+||++....+..-|++..+ +.|+|.|||+....+. +|||+||++|+|.+.|+|.|+.+++...|-
T Consensus 154 v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n~fV 230 (338)
T COG3839 154 VFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPANLFV 230 (338)
T ss_pred EEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccchhh
Confidence 9999999999999999988888876543 6899999999988775 799999999999999999999998876663
No 128
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.5e-40 Score=376.58 Aligned_cols=231 Identities=37% Similarity=0.611 Sum_probs=206.9
Q ss_pred EEEEEEEEEecCC-CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1224 IEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
++++|++++|+.. ..++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4789999999643 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEeCCCccCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1303 VVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1303 iVpQdp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
|+||+|.+|+.|+++|+..... ...+++.+.++..++.+.+..+ |+++..+....+||+|||||++||||++++|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999976432 3445677778888888888877 888888888889999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHH
Q 000497 1380 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1455 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~ 1455 (1460)
+||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+.. +..+.++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~-~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQK-GVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcC-hhHHHHh
Confidence 99999999999999999999998776789999999999999889999999999999999999998754 4555554
No 129
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=375.23 Aligned_cols=226 Identities=31% Similarity=0.450 Sum_probs=192.3
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+...+|++++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999953 46999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000497 1303 VVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLC 1381 (1460)
Q Consensus 1303 iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1381 (1460)
++||+|.+|+.|+++|+.......+.+ ...+.+.++.+|++ ........+||+|||||++||||++++|++||
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~lll 154 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEK------NVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLL 154 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcH------HHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999999999999997532211111 01123344445665 34556677899999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHHHHHHH
Q 000497 1382 LDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFVR 1456 (1460)
Q Consensus 1382 LDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~ 1456 (1460)
|||||++||.++.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++..++...+.+.+.
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~~~ 232 (241)
T PRK14250 155 LDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTKLFI 232 (241)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHHHHH
Confidence 999999999999999999998764 37999999999999875 8999999999999999999998766545655443
No 130
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-40 Score=368.13 Aligned_cols=215 Identities=31% Similarity=0.510 Sum_probs=192.0
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCC-CCChHHHhccc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII-NTPVRDLRGRF 1301 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~-~i~~~~lR~~i 1301 (1460)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 58999999999876 78999999999999999999999999999999999999999999999999998 48899999999
Q ss_pred EEEeCCC--ccCCccHHHhcCcCCC---CChHH----HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000497 1302 AVVPQSP--FLFEGSLRDNLDPFHM---NDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1372 (1460)
Q Consensus 1302 ~iVpQdp--~lf~gTIR~NLdp~~~---~sd~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1372 (1460)
++|.|+| .+|..||.+.+.++.. .+.+| +.++|+.+ |+.........+||||||||+|||.+
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~v---------gl~~~~~r~p~~LSGGqkqRvaIA~v 152 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELV---------GLEELLDRPPFNLSGGQKQRVAIAGV 152 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHc---------CchhhccCCccccCCcceeeHHhhHH
Confidence 9999999 7999999999987642 24434 34444444 44444556677899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1373 LLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1373 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
|..+|+|||||||||+||+...+.+.+.+++..+ ++|+|+|||+++.+.. |||++||++|+++.+|+|+++.++.
T Consensus 153 La~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~~ 230 (235)
T COG1122 153 LAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFNDA 230 (235)
T ss_pred HHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhhh
Confidence 9999999999999999999999999999988754 5799999999999988 8999999999999999999998864
No 131
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.9e-40 Score=369.77 Aligned_cols=217 Identities=37% Similarity=0.540 Sum_probs=196.8
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
|.++++|++++|+....++++|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999964334699999999999999999999999999999999999999999999999999888877788999
Q ss_pred EEEeCCCccCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1302 AVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1302 ~iVpQdp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
+++||+|.+|..|+++|+..... .+.+++.+.++..++.+.++.. |+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998999999976432 3445677888999998888776 89998888888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEc
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G 1438 (1460)
+|||||||++||.++.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999876668999999999988889999999999998764
No 132
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-40 Score=373.95 Aligned_cols=217 Identities=29% Similarity=0.450 Sum_probs=184.6
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh---HHHhcc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1300 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1300 (1460)
|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 478999999963 469999999999999999999999999999999999999999999999999987764 567889
Q ss_pred cEEEeCCCccCCc-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1301 FAVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1301 i~iVpQdp~lf~g-TIR~NLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
++++||++.+|++ |+++|+.... ..+.++..+. ..+.++.+|++........+||||||||++||||+++
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~ 153 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREI-----VLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALAL 153 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHH-----HHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 9999999999986 9999996431 1222222211 2233444466555556666899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
+|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||||++|++|++++.|+++++.+..
T Consensus 154 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 228 (235)
T cd03261 154 DPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRASD 228 (235)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCCC
Confidence 9999999999999999999999999987643 7899999999999876 8999999999999999999997643
No 133
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-40 Score=389.94 Aligned_cols=224 Identities=27% Similarity=0.428 Sum_probs=190.7
Q ss_pred EEEEEEEEEecC--CCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHH---Hh
Q 000497 1224 IEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1298 (1460)
Q Consensus 1224 I~f~nvs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1298 (1460)
|+++|++++|+. ...++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999962 2346999999999999999999999999999999999999999999999999999887654 47
Q ss_pred cccEEEeCCCccCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000497 1299 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1374 (1460)
Q Consensus 1299 ~~i~iVpQdp~lf~-gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1374 (1460)
++++||||++.+|+ .|+++|+.... ..++++..+ .+.+.++.+|++........+||||||||++|||||+
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~ 156 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALA 156 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHH
Confidence 89999999999886 69999996431 122222211 2334555557776667777789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHH
Q 000497 1375 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1451 (1460)
Q Consensus 1375 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1451 (1460)
++|+||+|||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+++++..++...+
T Consensus 157 ~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~ 236 (343)
T PRK11153 157 SNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPKHPL 236 (343)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCcHH
Confidence 99999999999999999999999999987643 7899999999999876 89999999999999999999987654434
Q ss_pred H
Q 000497 1452 S 1452 (1460)
Q Consensus 1452 ~ 1452 (1460)
.
T Consensus 237 ~ 237 (343)
T PRK11153 237 T 237 (343)
T ss_pred H
Confidence 3
No 134
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.6e-40 Score=371.89 Aligned_cols=213 Identities=32% Similarity=0.458 Sum_probs=180.1
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccC-----CCCCceEEECCEeCCCCC--hHH
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT-----PICGGQILVDGLNIINTP--VRD 1296 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~-----~~~~G~I~IDG~di~~i~--~~~ 1296 (1460)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++...+ ...
T Consensus 1 i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGD--KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 578999999964 36999999999999999999999999999999999999 999999999999998776 567
Q ss_pred HhcccEEEeCCCccCCccHHHhcCcCCC---C-ChHHHHHHHHHhcHHHHHHhCCCchhhhcC--CCCCChhHHHHHHHH
Q 000497 1297 LRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-DDLKIWSVLEKCHVKEEVEAVGLETFVKES--GISFSVGQRQLICLA 1370 (1460)
Q Consensus 1297 lR~~i~iVpQdp~lf~gTIR~NLdp~~~---~-sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~--G~~LSgGQrQrl~LA 1370 (1460)
+|++++|+||++.+|..|+++|+.+... . .+++.. ..+.+.++.+|++...... +.+||||||||++||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la 153 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELD-----ERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLA 153 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHH-----HHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHH
Confidence 8889999999999998899999965321 1 111111 1122333444565444444 478999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHH
Q 000497 1371 RALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1443 (1460)
Q Consensus 1371 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eL 1443 (1460)
||++++|++|||||||++||+++.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 154 RALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 9999999999999999999999999999999987655899999999999875 899999999999999998764
No 135
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-40 Score=348.79 Aligned_cols=220 Identities=28% Similarity=0.433 Sum_probs=188.9
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCC---hHHHhc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDLRG 1299 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---~~~lR~ 1299 (1460)
.|+++||+.+|+ +...+|+||||+|++||.|||+|+||||||||+++|.|+.+|++|+|.++|.++..++ ++.+|+
T Consensus 3 ~i~~~nl~k~yp-~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYP-GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecC-CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 589999999996 4567999999999999999999999999999999999999999999999999999887 677889
Q ss_pred ccEEEeCCCccCCc-cHHHhcCc------------CCCCChH---HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhH
Q 000497 1300 RFAVVPQSPFLFEG-SLRDNLDP------------FHMNDDL---KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1363 (1460)
Q Consensus 1300 ~i~iVpQdp~lf~g-TIR~NLdp------------~~~~sd~---ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQ 1363 (1460)
++|+|.|++-|-+- |+.+|+.. ++-++.+ ...++|+++|+.+. .-.+..+|||||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~---------A~qra~~LSGGQ 152 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDK---------AYQRASTLSGGQ 152 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHH---------HHHHhccCCcch
Confidence 99999999998875 99999743 2334433 34455566655443 334456899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcCh
Q 000497 1364 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1440 (1460)
Q Consensus 1364 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1440 (1460)
+||++|||||.++|+|++=|||+|+||+++.+.+++.|++.. .|.|||+.-|.++..++ ||||+-|++|||+..|++
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 999999999999999999999999999999999999998764 58999999999999876 699999999999999999
Q ss_pred hHHhccCCcHHHHHH
Q 000497 1441 QTLLQDECSVFSSFV 1455 (1460)
Q Consensus 1441 ~eLl~~~~~~f~~l~ 1455 (1460)
+||-+ ..+...|
T Consensus 233 ~el~~---~~~~~iY 244 (258)
T COG3638 233 SELTD---EALDEIY 244 (258)
T ss_pred hhhhH---HHHHHHh
Confidence 99643 2454444
No 136
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.6e-40 Score=355.77 Aligned_cols=208 Identities=30% Similarity=0.421 Sum_probs=173.5
Q ss_pred EEEEEEEEEecCCC--CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh---HHHh
Q 000497 1224 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLR 1298 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR 1298 (1460)
++++||+..|..+. ..+|+++||+|++||.|+|+||||||||||+++|-++..|++|.|.++|.|+..++- ..+|
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67899999997543 368999999999999999999999999999999999999999999999999999984 3444
Q ss_pred -cccEEEeCCCccCCc-cHHHhcCc---CCCCChHHHHHHHHHhcHHHHHHhCCCchhhh-cCCCCCChhHHHHHHHHHH
Q 000497 1299 -GRFAVVPQSPFLFEG-SLRDNLDP---FHMNDDLKIWSVLEKCHVKEEVEAVGLETFVK-ESGISFSVGQRQLICLARA 1372 (1460)
Q Consensus 1299 -~~i~iVpQdp~lf~g-TIR~NLdp---~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~-e~G~~LSgGQrQrl~LARA 1372 (1460)
++||+|+|+..|++. |++||+.. +......+..++ ..+..+.+||..... .....||||||||+|||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~-----~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARA 156 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRA-----AEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARA 156 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHH-----HHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHH
Confidence 569999999999876 99999862 222221111111 122333346665544 5577899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCeEEE
Q 000497 1373 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVE 1436 (1460)
Q Consensus 1373 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE 1436 (1460)
|+.+|+|++.||||++||.+|.+.|.+.+++.. .++|+|+|||+.+....|||++.|.+|++.+
T Consensus 157 L~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 157 LINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999998874 3789999999999999999999999999543
No 137
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3e-40 Score=378.06 Aligned_cols=219 Identities=25% Similarity=0.340 Sum_probs=196.0
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.|+++|+++.|+... .++|+|+||+|++||+++|+|++|||||||+++|.|+++ .+|+|.++|
T Consensus 2 ~i~~~nls~~~~~~~----~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr 76 (275)
T cd03289 2 QMTVKDLTAKYTEGG----NAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWR 76 (275)
T ss_pred eEEEEEEEEEeCCCC----CcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHh
Confidence 478999999996421 236999999999999999999999999999999999998 799999987
Q ss_pred -cEEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccC
Q 000497 674 -SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 752 (1460)
Q Consensus 674 -~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~ 752 (1460)
.++||||+|++|++|++||+....++++++..++++.++|...+..+|++++|.++++|.+||||||||++||||++++
T Consensus 77 ~~i~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~ 156 (275)
T cd03289 77 KAFGVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSK 156 (275)
T ss_pred hhEEEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999974445677888999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhccccCccc
Q 000497 753 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWS 831 (1460)
Q Consensus 753 ~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 831 (1460)
|+|+||||||++||+.+.+.+.+. +.. ..+++|+|+|||+++.+..||+|++|++|++++.|+++++.+....+..+
T Consensus 157 p~illlDEpts~LD~~~~~~l~~~-l~~-~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~ 233 (275)
T cd03289 157 AKILLLDEPSAHLDPITYQVIRKT-LKQ-AFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQA 233 (275)
T ss_pred CCEEEEECccccCCHHHHHHHHHH-HHH-hcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHH
Confidence 999999999999999998877766 433 34578999999999999899999999999999999999998765444433
No 138
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-40 Score=380.24 Aligned_cols=218 Identities=30% Similarity=0.499 Sum_probs=184.9
Q ss_pred EEEEEEEEEecCCC---CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCC--hHHHh
Q 000497 1224 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--VRDLR 1298 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~--~~~lR 1298 (1460)
|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999996432 36999999999999999999999999999999999999999999999999998753 45788
Q ss_pred cccEEEeCCC--ccCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCc--hhhhcCCCCCChhHHHHHHHHH
Q 000497 1299 GRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLE--TFVKESGISFSVGQRQLICLAR 1371 (1460)
Q Consensus 1299 ~~i~iVpQdp--~lf~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLd--t~v~e~G~~LSgGQrQrl~LAR 1371 (1460)
++++||||+| .+|+.|+++|+.+.. ..++++..+. ..+.++.+|++ ...+.....||||||||++|||
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAr 157 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAG 157 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHH
Confidence 9999999998 578899999997532 1233332221 12233344665 4456667789999999999999
Q ss_pred HHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1372 ALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1372 ALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
||+.+|+||||||||++||+.+.+.+.+.|++..+ +.|||+|||+++.+. .||||++|++|++++.|++++++++
T Consensus 158 aL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13637 158 VVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFKE 235 (287)
T ss_pred HHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 99999999999999999999999999999987643 789999999999986 4899999999999999999998763
No 139
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-40 Score=371.59 Aligned_cols=219 Identities=26% Similarity=0.430 Sum_probs=187.3
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC---CCCceEEECCEeCCCCChHHHhc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLRG 1299 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR~ 1299 (1460)
.|+++|++++|+. +++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.|+...+...+|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 4789999999963 469999999999999999999999999999999999985 68999999999999888888899
Q ss_pred ccEEEeCCCccCCccHHHhcCcCCCC---------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000497 1300 RFAVVPQSPFLFEGSLRDNLDPFHMN---------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1370 (1460)
Q Consensus 1300 ~i~iVpQdp~lf~gTIR~NLdp~~~~---------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1370 (1460)
+++|+||+|.+|+.|+++|+.+.... .++++.++++.+++.+.+ .....+.+.+||+|||||++||
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv~la 154 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEV-----KDKLKQNALALSGGQQQRLCIA 154 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhh-----hHHhcCCcccCCHHHHHHHHHH
Confidence 99999999999999999999653211 111233444444432221 1234566778999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCC
Q 000497 1371 RALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1448 (1460)
Q Consensus 1371 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1448 (1460)
||++++|++++|||||++||.++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+.
T Consensus 155 ral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 233 (246)
T PRK14269 155 RALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENPK 233 (246)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCCC
Confidence 9999999999999999999999999999999887678999999999998865 89999999999999999999987543
No 140
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-40 Score=378.27 Aligned_cols=220 Identities=28% Similarity=0.440 Sum_probs=187.3
Q ss_pred cEEEEEEEEEecCC-CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1223 LIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
.++++||+++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999643 24699999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEeCCCc--cCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1302 AVVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1302 ~iVpQdp~--lf~gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
+++||+|. ++..|+++|+.+... .+.++..+ ...+.++.+|++........+||||||||++|||||+++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral~~~ 158 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKE-----RVNEALELVGMQDFKEREPARLSGGQKQRVAIAGAVAMR 158 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 99999983 566799999975321 22222111 112233334565555666678999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||||++|++|++++.|+++++.++.
T Consensus 159 p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13650 159 PKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSRG 231 (279)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcCh
Confidence 999999999999999999999999987643 89999999999999889999999999999999999987653
No 141
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.5e-40 Score=372.30 Aligned_cols=222 Identities=26% Similarity=0.442 Sum_probs=187.3
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hcccE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1302 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1302 (1460)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999963 469999999999999999999999999999999999999999999999999988876554 57899
Q ss_pred EEeCCCccCCc-cHHHhcCcCCCC-ChHHH-------HHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000497 1303 VVPQSPFLFEG-SLRDNLDPFHMN-DDLKI-------WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1303 iVpQdp~lf~g-TIR~NLdp~~~~-sd~ei-------~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1373 (1460)
|+||+|.+|++ |+++|+...... ....+ ...-......+.++.+|++...+.....||||||||++||||+
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 158 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEIARAL 158 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHHHHHH
Confidence 99999999987 999998643211 00000 0000111234555666887777777789999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1374 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1374 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
+++|+++||||||++||..+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 159 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 234 (236)
T cd03219 159 ATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNNP 234 (236)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccCC
Confidence 99999999999999999999999999998764 68999999999999876 8999999999999999999987643
No 142
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-40 Score=386.01 Aligned_cols=223 Identities=29% Similarity=0.434 Sum_probs=189.4
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcc
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1300 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1300 (1460)
+..|+++|++++|.. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+.+ |++
T Consensus 4 ~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ 79 (351)
T PRK11432 4 KNFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRD 79 (351)
T ss_pred CcEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCC
Confidence 346999999999963 4699999999999999999999999999999999999999999999999999887754 678
Q ss_pred cEEEeCCCccCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1301 FAVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1301 i~iVpQdp~lf~g-TIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
+++|+|++.+|+. |+++|+.+... .+++++.+. +.+.++.+|++.........||||||||++|||||+++
T Consensus 80 ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~-----v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~ 154 (351)
T PRK11432 80 ICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQR-----VKEALELVDLAGFEDRYVDQISGGQQQRVALARALILK 154 (351)
T ss_pred EEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHH-----HHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcC
Confidence 9999999999986 99999975321 222322221 12233333555555566678999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHHH
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1452 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1452 (1460)
|+||+||||||+||..+.+.+++.|++..+ ++|+|+|||+++.+.. ||||+||++|+|++.|+|+++.+++...|.
T Consensus 155 P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~~~~~ 233 (351)
T PRK11432 155 PKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPASRFM 233 (351)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCchHH
Confidence 999999999999999999999999987654 7999999999999865 899999999999999999999988876553
No 143
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.5e-40 Score=368.21 Aligned_cols=214 Identities=27% Similarity=0.394 Sum_probs=181.2
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++||+++|+.+..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEE
Confidence 5789999999643256999999999999999999999999999999999999999999999999987643 667889999
Q ss_pred EeCCCccC-CccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1304 VPQSPFLF-EGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1304 VpQdp~lf-~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+||+|.+| ..|+++|+.... ....++..+ ...+.++.+|++........+||+|||||++||||++++|++
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 154 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKE-----EVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSV 154 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999988 569999986421 112111111 123344444665555555668999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHH
Q 000497 1380 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1443 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eL 1443 (1460)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 155 LLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999987777999999999999875 899999999999999999875
No 144
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=374.02 Aligned_cols=221 Identities=28% Similarity=0.405 Sum_probs=187.9
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-----CCCceEEECCEeCCC--CC
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TP 1293 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~ 1293 (1460)
++.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 567999999999964 369999999999999999999999999999999999986 589999999999863 45
Q ss_pred hHHHhcccEEEeCCCccCCccHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000497 1294 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1365 (1460)
Q Consensus 1294 ~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~----~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1365 (1460)
...+|++++|+||+|.+|+.|+++|+.... ..+. ++++++++.+++.+. ++...++...+||+||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~Gq~q 163 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNE-----VKDKLHQSGYSLSGGQQQ 163 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChh-----hHHHHhcCCCCCCHHHHH
Confidence 667899999999999999999999997531 1222 234444444443221 124456677789999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHh
Q 000497 1366 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1366 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
|++||||++++|+||||||||++||.++.+.+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 164 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 164 RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred HHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999865 8999999999999999999998
Q ss_pred ccCC
Q 000497 1445 QDEC 1448 (1460)
Q Consensus 1445 ~~~~ 1448 (1460)
+.+.
T Consensus 244 ~~~~ 247 (260)
T PRK10744 244 TKPA 247 (260)
T ss_pred hCCC
Confidence 7543
No 145
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-40 Score=386.99 Aligned_cols=222 Identities=23% Similarity=0.349 Sum_probs=188.7
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++|++++|+. ..++|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ +++++
T Consensus 3 ~l~i~~l~~~~~~-~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDG-KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCC-CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999942 24699999999999999999999999999999999999999999999999999988764 47899
Q ss_pred EEeCCCccCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1303 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1303 iVpQdp~lf~g-TIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
||||++.+|+. |+++|+.+... .+..+..+ ...+.++.+|++...+....+||||||||++|||||+++|+
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~ 154 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEE-----RVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIVREPA 154 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999975 99999975422 22222211 12233444466665666677899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHHH
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1452 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1452 (1460)
+|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++...|.
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~~~~ 231 (356)
T PRK11650 155 VFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPASTFV 231 (356)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCccHHH
Confidence 9999999999999999999999987653 7899999999998765 899999999999999999999988765553
No 146
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.2e-39 Score=385.86 Aligned_cols=221 Identities=28% Similarity=0.421 Sum_probs=191.8
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++|++++|+. ..+|+|+||+|++||+++|+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ +++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999964 4689999999999999999999999999999999999999999999999999887764 67899
Q ss_pred EEeCCCccCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1303 VVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1303 iVpQdp~lf~-gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
||||++.+|+ .|+++|+.+... .+..+.. ....+.++.+||+........+||||||||++|||||+++|+
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~-----~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~ 154 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVA-----ERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPG 154 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999997 499999975321 2222221 123445555678777777888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHHH
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1452 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1452 (1460)
+|+||||||+||..+.+.+++.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++...|.
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~~~~ 231 (353)
T TIGR03265 155 LLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPATPFV 231 (353)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCCHHH
Confidence 9999999999999999999999987643 7899999999998765 899999999999999999999998876663
No 147
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.8e-40 Score=370.98 Aligned_cols=222 Identities=29% Similarity=0.450 Sum_probs=189.0
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999753 469999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EeCCCccCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCch--hhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1304 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLET--FVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1304 VpQdp~lf~-gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt--~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
+||+|.+|+ .|+++|+..... .+.++. .....+.++.+|++. .....+.+||+|||||++||||++++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p 154 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADP 154 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999986 599999964321 111111 112344555567764 566777899999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHH
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1451 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1451 (1460)
++|+|||||++||.++.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++.+++...+
T Consensus 155 ~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 231 (242)
T cd03295 155 PLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPANDF 231 (242)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCCChH
Confidence 9999999999999999999999998764 37999999999998765 89999999999999999999976544333
No 148
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-39 Score=369.40 Aligned_cols=216 Identities=28% Similarity=0.393 Sum_probs=183.4
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 78 (239)
T cd03296 3 IEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGF 78 (239)
T ss_pred EEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999876653 3678999
Q ss_pred EeCCCccCC-ccHHHhcCcCCCC-------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1304 VPQSPFLFE-GSLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1304 VpQdp~lf~-gTIR~NLdp~~~~-------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
+||+|.+|+ .|+++|+.+.... +..+.. ..+.+.++.+|++........+||+|||||++|||||++
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~ 153 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIR-----AKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAV 153 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHH-----HHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 999999886 5999999753211 111111 112344455577666666677899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCC
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1448 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1448 (1460)
+|++|||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 154 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 229 (239)
T cd03296 154 EPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDHPA 229 (239)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcCCC
Confidence 9999999999999999999999999987643 7899999999998765 89999999999999999999986543
No 149
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=378.08 Aligned_cols=219 Identities=27% Similarity=0.428 Sum_probs=187.1
Q ss_pred cEEEEEEEEEecCCC---CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCC----ChH
Q 000497 1223 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~ 1295 (1460)
.|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 379999999996432 3699999999999999999999999999999999999999999999999999754 346
Q ss_pred HHhcccEEEeCCC--ccCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHH
Q 000497 1296 DLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICL 1369 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp--~lf~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~L 1369 (1460)
.+|++++||||+| .+|+.|+++|+.+.. ..+.++..+. ..+.++.+||++ ..+..+.+||||||||++|
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~l 156 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAI 156 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHcCCChhhhhCCcccCCHHHHHHHHH
Confidence 7899999999998 588899999996532 1232232221 234455568874 4566788999999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1370 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1370 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+. .||||++|++|++++.|+++++.++
T Consensus 157 araL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 236 (286)
T PRK13646 157 VSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFKD 236 (286)
T ss_pred HHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999999998763 4899999999999986 4799999999999999999998764
No 150
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.4e-39 Score=370.49 Aligned_cols=221 Identities=29% Similarity=0.437 Sum_probs=186.5
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCC-----CceEEECCEeCCCC--ChHH
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIINT--PVRD 1296 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~i--~~~~ 1296 (1460)
++++||+++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGE--KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECC--eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 789999999964 35999999999999999999999999999999999999998 99999999999763 4567
Q ss_pred HhcccEEEeCCCccCCccHHHhcCcCC---C-CChHHHHHHHHHhcHHHHHHhCCCc----hhhhcCCCCCChhHHHHHH
Q 000497 1297 LRGRFAVVPQSPFLFEGSLRDNLDPFH---M-NDDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQLIC 1368 (1460)
Q Consensus 1297 lR~~i~iVpQdp~lf~gTIR~NLdp~~---~-~sd~ei~~aL~~~~l~~~i~~lgLd----t~v~e~G~~LSgGQrQrl~ 1368 (1460)
.|++++|+||++.+|+.|+++|+.... . .+.++..+ ...+.++.+|++ ...+....+||||||||++
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~ 154 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDE-----IVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLC 154 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHH
Confidence 788999999999999999999996421 1 11111111 122333444555 4456667789999999999
Q ss_pred HHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1369 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1369 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
||||++++|+++||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++
T Consensus 155 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 234 (247)
T TIGR00972 155 IARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFTNP 234 (247)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCC
Confidence 999999999999999999999999999999999887667899999999998865 8999999999999999999998765
Q ss_pred CcHH
Q 000497 1448 CSVF 1451 (1460)
Q Consensus 1448 ~~~f 1451 (1460)
...+
T Consensus 235 ~~~~ 238 (247)
T TIGR00972 235 KEKR 238 (247)
T ss_pred CChH
Confidence 4444
No 151
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=8.6e-40 Score=366.53 Aligned_cols=215 Identities=26% Similarity=0.423 Sum_probs=182.0
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hcccE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1302 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1302 (1460)
|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK--SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC--eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 578999999964 369999999999999999999999999999999999999999999999999988876654 67899
Q ss_pred EEeCCCccCCc-cHHHhcCcCCCCC-hHHHHHHHHHhcHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1303 VVPQSPFLFEG-SLRDNLDPFHMND-DLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1303 iVpQdp~lf~g-TIR~NLdp~~~~s-d~ei~~aL~~~~l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
|+||++.+|++ |+++|+.+..... +.+..+ .+.+.++.+ +++...+....+||+|||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~-----~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 153 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKA-----RLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKL 153 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHH-----HHHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999987 9999996542211 111111 112233333 455555666778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1380 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
|+|||||++||.++.+.+.+.|++.. +++|+|++||+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 154 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 154 LLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 99999999999999999999998764 57999999999998866 89999999999999999988764
No 152
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=372.25 Aligned_cols=223 Identities=26% Similarity=0.390 Sum_probs=187.7
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCC--CCh
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1294 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1294 (1460)
..++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 6 AIIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred ceEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 36999999999964 4699999999999999999999999999999999999997 48999999999863 345
Q ss_pred HHHhcccEEEeCCCccCCccHHHhcCcCCC----CC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000497 1295 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1366 (1460)
Q Consensus 1295 ~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~----~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1366 (1460)
..+|++++|+||+|.+|+.|+++|+.+... .+ ++++.++++.+++.+.+ +........+||||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LSgG~~qr 158 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV-----KDKLNTNALSLSGGQQQR 158 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh-----HHHHhCCcccCCHHHHHH
Confidence 677899999999999999999999964321 11 23344555555543222 223344567899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1367 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1367 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
++|||||+++|++|||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 159 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 238 (254)
T PRK14273 159 LCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELFF 238 (254)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999988678999999999999865 89999999999999999999987
Q ss_pred cCCcHH
Q 000497 1446 DECSVF 1451 (1460)
Q Consensus 1446 ~~~~~f 1451 (1460)
++.-.|
T Consensus 239 ~~~~~~ 244 (254)
T PRK14273 239 NPKNTK 244 (254)
T ss_pred CCCChH
Confidence 654333
No 153
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-40 Score=361.07 Aligned_cols=205 Identities=28% Similarity=0.370 Sum_probs=172.1
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
|++++++..|... ......+|+|+||+|++||+.+|+|+||+|||||++++.++-.|++|+|.++|
T Consensus 2 I~l~~vsK~~~~~-~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 2 IELENVSKTFGQT-GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred eEEEeeeeeeccC-CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 6788998888753 22234579999999999999999999999999999999999999999999988
Q ss_pred ---cEEEEcCCCCCCC-ccHHHHHccCCCC----ChHH---HHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 ---SIAYVPQVPWILS-GTIRDNILFGKNY----DPQS---YSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~~----~~~~---~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
+||+++|++.|++ .||.|||.|..+. .++. ..+.++..+|.+.. +....+||||||||
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~-----------~~yP~qLSGGQKQR 149 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKA-----------DRYPAQLSGGQKQR 149 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhh-----------ccCchhcCcchhhH
Confidence 5999999999998 5999999997542 2333 34444445555333 34456999999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHH
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 821 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 821 (1460)
|+|||||..+|+|||.|||||||||+|.+.|++.+..-....|-|+++|||.++.++. ||||.+|++|+++++|+..++
T Consensus 150 VaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~v 229 (339)
T COG1135 150 VAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEV 229 (339)
T ss_pred HHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHh
Confidence 9999999999999999999999999999999986332223347799999999999987 999999999999999999887
Q ss_pred Hh
Q 000497 822 AV 823 (1460)
Q Consensus 822 ~~ 823 (1460)
-.
T Consensus 230 F~ 231 (339)
T COG1135 230 FA 231 (339)
T ss_pred hc
Confidence 54
No 154
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=376.38 Aligned_cols=218 Identities=29% Similarity=0.454 Sum_probs=184.4
Q ss_pred EEEEEEEEEecCCC---CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCC----CChHH
Q 000497 1224 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----TPVRD 1296 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~----i~~~~ 1296 (1460)
|+++||+++|+++. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997432 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcccEEEeCCC--ccCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHH
Q 000497 1297 LRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLA 1370 (1460)
Q Consensus 1297 lR~~i~iVpQdp--~lf~gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LA 1370 (1460)
+|++++||+|+| .+|+.|+++|+.+... .+.+++.+ ...+.++.+|++ ........+||||||||++||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA 156 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIA 156 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCCChhhccCCcccCCHHHHHHHHHH
Confidence 899999999998 7899999999964321 22222211 122334444664 345666778999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1371 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1371 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
|||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||++|++|++++.|+|+++..+
T Consensus 157 ~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 234 (288)
T PRK13643 157 GILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQE 234 (288)
T ss_pred HHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 99999999999999999999999999999998754 4899999999999885 4899999999999999999998764
No 155
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.3e-40 Score=368.88 Aligned_cols=219 Identities=28% Similarity=0.434 Sum_probs=185.3
Q ss_pred EEEEEEEEEecCC--CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HHh
Q 000497 1224 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1298 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR 1298 (1460)
|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 7899999999643 12699999999999999999999999999999999999999999999999999877654 347
Q ss_pred cccEEEeCCCccCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000497 1299 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1374 (1460)
Q Consensus 1299 ~~i~iVpQdp~lf~-gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1374 (1460)
++++|+||+|.+|+ .|+++|+.... ..+..+. .....+.++.+|++........+||+|||||++||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~ 156 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEI-----EERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALA 156 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHh
Confidence 89999999999997 59999986421 1111111 112234455557766666677789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1375 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1375 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
++|+++||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++.+++
T Consensus 157 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 232 (233)
T cd03258 157 NNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFANP 232 (233)
T ss_pred cCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCC
Confidence 9999999999999999999999999998764 27899999999999876 8999999999999999999987643
No 156
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.4e-39 Score=365.70 Aligned_cols=215 Identities=35% Similarity=0.525 Sum_probs=194.0
Q ss_pred CCccEEEEEEEEEecCC-CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHh
Q 000497 1220 FQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLR 1298 (1460)
Q Consensus 1220 ~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR 1298 (1460)
..|.++++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+....|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45789999999999643 24699999999999999999999999999999999999999999999999999888878888
Q ss_pred cccEEEeCCCccCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1299 GRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1299 ~~i~iVpQdp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
++++|+||+|.+|++|+++|+++... ....++++..++.++.+.++.+ |+++.+++...+||||||||++||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999985432 2334555666667788888888 89988899899999999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeE
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHL 1434 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~I 1434 (1460)
+|+++||||||++||+++.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999987778999999999999988999999999975
No 157
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-39 Score=373.55 Aligned_cols=220 Identities=25% Similarity=0.468 Sum_probs=189.8
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++|++++|+.+.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 58999999999644457999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEeCCC--ccCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1303 VVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1303 iVpQdp--~lf~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
|+||+| .++..|+++|+.+.. ..++++..+ .+.+.++.+|++........+||+|||||++|||||+++|
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASVLALNP 161 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998 455679999996531 123332221 1233445557776677777899999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
++|||||||++||..+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+++
T Consensus 162 ~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 233 (271)
T PRK13632 162 EIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNNK 233 (271)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcCH
Confidence 99999999999999999999999987643 48999999999998889999999999999999999987643
No 158
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.3e-39 Score=384.55 Aligned_cols=209 Identities=26% Similarity=0.386 Sum_probs=180.0
Q ss_pred CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH----hcccEEEeCCCccCCc
Q 000497 1238 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGRFAVVPQSPFLFEG 1313 (1460)
Q Consensus 1238 ~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~i~iVpQdp~lf~g 1313 (1460)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.|+...+...+ |++++||||++.+|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 469999999999999999999999999999999999999999999999999999998887 7899999999999985
Q ss_pred -cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCC
Q 000497 1314 -SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANV 1389 (1460)
Q Consensus 1314 -TIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~l 1389 (1460)
|+++|+.+... .+.++..+ ...+.++.+||+...+....+||||||||++|||||+++|+|||||||||+|
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saL 160 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKE-----KALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSAL 160 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 99999964321 22222211 1223344447777777788899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHH
Q 000497 1390 DAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1451 (1460)
Q Consensus 1390 D~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1451 (1460)
|+.+.+.+++.+++.. .++|+|+|||+++.+.. ||||++|++|++++.|+|+++++++...|
T Consensus 161 D~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 161 DPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 9999999999998763 38999999999998754 89999999999999999999998765444
No 159
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=371.49 Aligned_cols=219 Identities=28% Similarity=0.422 Sum_probs=185.3
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-----CCCceEEECCEeCCC--CChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1295 (1460)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999963 369999999999999999999999999999999999975 589999999999875 3455
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcCC----CCC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~~----~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
.+|++++|+||++.+|++|+++|+.+.. ... ++++.++++.+++.+.+ +...+....+||||||||+
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq~qrv 158 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-----KDRLHESALGLSGGQQQRL 158 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-----hHHhhCCcccCCHHHHHHH
Confidence 7789999999999999999999996421 111 22344444444443221 2234566778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||++++|+||||||||++||..+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 238 (253)
T PRK14242 159 CIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIFTR 238 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHHcC
Confidence 9999999999999999999999999999999999987667899999999999865 899999999999999999999876
Q ss_pred CC
Q 000497 1447 EC 1448 (1460)
Q Consensus 1447 ~~ 1448 (1460)
+.
T Consensus 239 ~~ 240 (253)
T PRK14242 239 PR 240 (253)
T ss_pred CC
Confidence 54
No 160
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2e-39 Score=366.63 Aligned_cols=215 Identities=27% Similarity=0.432 Sum_probs=185.7
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.+. +++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998776544 458999
Q ss_pred EeCCCcc-CCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1304 VPQSPFL-FEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1304 VpQdp~l-f~gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+||++.+ +..|+++|+..... .+..+.. ....+.++.+|++...+....+||||||||++||||++++|+|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~l 153 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPAL 153 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999987 45799999965321 1111111 1234455556787777777789999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1380 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||||++||+++.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 154 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 154 LLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred EEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999998765 37999999999999988999999999999999999999875
No 161
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=371.91 Aligned_cols=223 Identities=25% Similarity=0.390 Sum_probs=188.6
Q ss_pred CCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-----CCCceEEECCEeCCC--
Q 000497 1219 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN-- 1291 (1460)
Q Consensus 1219 p~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~-- 1291 (1460)
|....|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++..
T Consensus 9 ~~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~ 86 (269)
T PRK14259 9 SKNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPR 86 (269)
T ss_pred CCCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 34457999999999964 369999999999999999999999999999999999987 589999999999863
Q ss_pred CChHHHhcccEEEeCCCccCCccHHHhcCcCCC---CC---hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000497 1292 TPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1365 (1460)
Q Consensus 1292 i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~---~s---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1365 (1460)
.+...+|++++|+||+|.+|+.|+++|+.+... .. ++++.++++.++++. +++........+||+||||
T Consensus 87 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 87 VDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWD-----ECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred CCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcc-----hhhhhhCCCcccCCHHHHH
Confidence 566778899999999999999999999975422 11 233444555554432 2233455566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeC-----------Ce
Q 000497 1366 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-----------GH 1433 (1460)
Q Consensus 1366 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~-----------G~ 1433 (1460)
|++||||++++|++|||||||++||+++.+.+.+.|++..+++|||+|||+++.+.+ ||||++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999887668999999999998865 899999996 67
Q ss_pred EEEEcChhHHhccCC
Q 000497 1434 LVEQGNPQTLLQDEC 1448 (1460)
Q Consensus 1434 IvE~G~p~eLl~~~~ 1448 (1460)
++|.|+++++.+++.
T Consensus 242 ~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 242 LVEFNETKKIFNSPK 256 (269)
T ss_pred EEEeCCHHHHHhCcC
Confidence 999999999987553
No 162
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=373.31 Aligned_cols=212 Identities=25% Similarity=0.405 Sum_probs=182.7
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999632 46999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEeCCC--ccCCccHHHhcCcCCC---CCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000497 1303 VVPQSP--FLFEGSLRDNLDPFHM---NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1303 iVpQdp--~lf~gTIR~NLdp~~~---~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1373 (1460)
|+||+| .++..|+++|+.+... .+. +++.++++. +|+..........||||||||++|||||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~---------~~L~~~~~~~~~~LSgG~~qrv~laraL 153 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKA---------VRMWDFRDKPPYHLSYGQKKRVAIAGVL 153 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHH---------CCCHHHhcCChhhCCHHHHHHHHHHHHH
Confidence 999998 5788999999975321 121 223333333 3554444555568999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHh
Q 000497 1374 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1374 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
+++|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|+++++.
T Consensus 154 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 154 AMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 99999999999999999999999999998764 48999999999999854 8999999999999999997653
No 163
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-39 Score=369.74 Aligned_cols=215 Identities=29% Similarity=0.420 Sum_probs=183.6
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCC---hHHHhcc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDLRGR 1300 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---~~~lR~~ 1300 (1460)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999642 46999999999999999999999999999999999999999999999999998876 4567889
Q ss_pred cEEEeCCCccCC-ccHHHhcCcCCC------------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1301 FAVVPQSPFLFE-GSLRDNLDPFHM------------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1301 i~iVpQdp~lf~-gTIR~NLdp~~~------------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
++++||++.+|+ .|+++|+..... .+++. .....+.++.+|++...+..+.+||||||||+
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv 153 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEE------KQRALAALERVGLLDKAYQRADQLSGGQQQRV 153 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHH------HHHHHHHHHHcCChhhhCCCcccCCHHHHHHH
Confidence 999999998887 599999964211 11110 11123344455776666777789999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHh
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
+||||++++|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 154 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 154 AIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 99999999999999999999999999999999998864 3799999999999998 48999999999999999999974
Q ss_pred c
Q 000497 1445 Q 1445 (1460)
Q Consensus 1445 ~ 1445 (1460)
+
T Consensus 234 ~ 234 (241)
T cd03256 234 D 234 (241)
T ss_pred H
Confidence 3
No 164
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-39 Score=373.32 Aligned_cols=219 Identities=25% Similarity=0.459 Sum_probs=188.2
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.++++||+++|+...+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999654456999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEeCCC--ccCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1303 VVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1303 iVpQdp--~lf~gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
|+||+| .+++.|+++|+..... .+.++..+ ...+.++.+||+..+......||+|||||++|||||+.+|
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVE-----RVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQP 159 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHH-----HHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998 4667899999975321 12222211 1223333346665566666789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+..||||++|++|++++.|+++++.+.
T Consensus 160 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 160 DIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999987653 7899999999999988999999999999999999998764
No 165
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.6e-39 Score=379.28 Aligned_cols=217 Identities=28% Similarity=0.415 Sum_probs=184.7
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
..|+++|++++|+. ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.++|.|+...+ ...|+++
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999964 46999999999999999999999999999999999999999999999999997755 4578999
Q ss_pred EEEeCCCccCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1302 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1302 ~iVpQdp~lf~-gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
+|+||+|.+|. .|++||+.++.. .++.+..+. ..+.++.+|++........+||+|||||++|||||+++|
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P 157 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARAL-----VPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDP 157 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCC
Confidence 99999999886 599999975332 122222211 123334445554444455589999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
++|+|||||++||+.+.+.+++.|++.. +++|||++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 158 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 158 DVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999998864 47899999999999976 899999999999999999999764
No 166
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-39 Score=373.75 Aligned_cols=218 Identities=28% Similarity=0.437 Sum_probs=186.3
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCC--CCChHHHhcc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII--NTPVRDLRGR 1300 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~--~i~~~~lR~~ 1300 (1460)
.|+++|++++|+. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+. ..+...+|++
T Consensus 5 ~l~~~~l~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSD-GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 5899999999963 346999999999999999999999999999999999999999999999999984 3445678999
Q ss_pred cEEEeCCC--ccCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1301 FAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1301 i~iVpQdp--~lf~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
++|+||+| .+|+.|+++|+.... ..+.++.++. ..+.++.+|++........+||+|||||++|||||+.
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~ 158 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVM 158 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999998 578899999996521 1232222221 2233444566666667778999999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 159 ~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 159 EPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999987753 799999999999987 5899999999999999999999864
No 167
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-39 Score=363.59 Aligned_cols=212 Identities=26% Similarity=0.403 Sum_probs=180.7
Q ss_pred cEEEEEEEEEecCCC--CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHH---H
Q 000497 1223 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---L 1297 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---l 1297 (1460)
.++++||+++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999996432 46999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cccEEEeCCCccCCc-cHHHhcCcC---CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000497 1298 R-GRFAVVPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1372 (1460)
Q Consensus 1298 R-~~i~iVpQdp~lf~g-TIR~NLdp~---~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1372 (1460)
| ++++|+||+|.+|++ |+++|+... .....++..+ .+.+.++.+|++........+||||||||++||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~a 159 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS-----RALEMLAAVGLEHRANHRPSELSGGERQRVAIARA 159 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHH
Confidence 3 679999999998876 999998642 1122222111 22344555577766677777899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcC
Q 000497 1373 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQGN 1439 (1460)
Q Consensus 1373 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~ 1439 (1460)
++++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+..+|++++|++|++++.|+
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 160 LVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999998763 4799999999999999999999999999998775
No 168
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=4.2e-39 Score=381.25 Aligned_cols=220 Identities=24% Similarity=0.375 Sum_probs=187.3
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+. .|++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 3889999999964 469999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEeCCCccCCc-cHHHhcCcCCC-------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000497 1303 VVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1374 (1460)
Q Consensus 1303 iVpQdp~lf~g-TIR~NLdp~~~-------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1374 (1460)
||||++.+|+. |+++|+.+... .+.++..+ ...+.++.+|++.........||||||||++|||||+
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~ 152 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKA-----KVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALA 152 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHh
Confidence 99999999985 99999975321 12222211 1223344446665566667789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHH
Q 000497 1375 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1451 (1460)
Q Consensus 1375 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1451 (1460)
++|++|+||||||+||..+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++...|
T Consensus 153 ~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p~~~~ 232 (353)
T PRK10851 153 VEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREPATRF 232 (353)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccchH
Confidence 99999999999999999999999999987653 7899999999999766 89999999999999999999998776544
No 169
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.4e-39 Score=367.97 Aligned_cols=220 Identities=30% Similarity=0.397 Sum_probs=182.3
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh---HHHhcc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1300 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1300 (1460)
|+++|++++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 2 l~~~~l~~~~~~-~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPN-GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCC-CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 689999999962 2469999999999999999999999999999999999999999999999999987654 446889
Q ss_pred cEEEeCCCccCC-ccHHHhcCcCCCCChH---HHH---HHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000497 1301 FAVVPQSPFLFE-GSLRDNLDPFHMNDDL---KIW---SVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1301 i~iVpQdp~lf~-gTIR~NLdp~~~~sd~---ei~---~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1373 (1460)
++++||++.+|+ .|+++|+......... .+. ..-++....+.++.+|++........+||||||||++|||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 160 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRADQLSGGQQQRVAIARAL 160 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHH
Confidence 999999998886 5999999642110000 000 000111223344455776666777789999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHh
Q 000497 1374 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1374 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 161 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (243)
T TIGR02315 161 AQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSELD 234 (243)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHhC
Confidence 99999999999999999999999999998764 37899999999999865 8999999999999999999973
No 170
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.4e-39 Score=331.21 Aligned_cols=207 Identities=29% Similarity=0.389 Sum_probs=180.8
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HHhcc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1300 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~ 1300 (1460)
|+|+||+.+|+.+ +++|+||||+|++||.+-++|||||||||++++|++...|++|+|.++|.|+++++.+ -||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 8999999999876 7899999999999999999999999999999999999999999999999999988754 58999
Q ss_pred cEEEeCCCccCCc-cHHHhcCcCC---CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000497 1301 FAVVPQSPFLFEG-SLRDNLDPFH---MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1372 (1460)
Q Consensus 1301 i~iVpQdp~lf~g-TIR~NLdp~~---~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1372 (1460)
||+|.||--|... |+.||+.+-- ..+. +++.++|+.+||.+. ...-...|||||+||+|||||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k---------~~~lP~~LSGGEQQRvaIARA 151 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHK---------ARALPSQLSGGEQQRVAIARA 151 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchh---------hhcCccccCchHHHHHHHHHH
Confidence 9999999988765 9999986421 1222 345566666665544 444566899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhc-CEEEEEeCCeEEEEcCh
Q 000497 1373 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNM-DEILILDHGHLVEQGNP 1440 (1460)
Q Consensus 1373 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~-DrIlVl~~G~IvE~G~p 1440 (1460)
+..+|++||=||||.+||+++...|.+.+.+.- .|.||++.||+.+.+.++ -|++.+++|+++....+
T Consensus 152 iV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 152 IVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999997764 599999999999999987 88999999999987654
No 171
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=370.23 Aligned_cols=223 Identities=24% Similarity=0.338 Sum_probs=185.6
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCC--CCChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII--NTPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~--~i~~~ 1295 (1460)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 4899999999964 4699999999999999999999999999999999999987 4999999999997 45566
Q ss_pred HHhcccEEEeCCCccCCc-cHHHhcCcCC---CC--Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---MN--DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1365 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~g-TIR~NLdp~~---~~--sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1365 (1460)
.+|++++++||+|.+|++ |+++|+.... .. .. +++.++++..++.+.+ .........+||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~q 156 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEV-----KDRLNDYPSNLSGGQRQ 156 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccch-----hhhhccChhhCCHHHHH
Confidence 788999999999999976 9999996421 10 11 2233344433332111 12345566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHh
Q 000497 1366 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1366 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
|++||||++++|+++||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 157 RLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999875 8999999999999999999998
Q ss_pred ccCCcHHH
Q 000497 1445 QDECSVFS 1452 (1460)
Q Consensus 1445 ~~~~~~f~ 1452 (1460)
+++...+.
T Consensus 237 ~~~~~~~~ 244 (253)
T PRK14267 237 ENPEHELT 244 (253)
T ss_pred hCCCcHHH
Confidence 76543343
No 172
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.5e-39 Score=383.45 Aligned_cols=222 Identities=25% Similarity=0.413 Sum_probs=191.3
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCC--ceEEECCEeCCCCChHHHh
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG--GQILVDGLNIINTPVRDLR 1298 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~--G~I~IDG~di~~i~~~~lR 1298 (1460)
.|.|+++|++++|+. ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++...+.. +
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~--~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH--K 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH--H
Confidence 578999999999964 369999999999999999999999999999999999999999 9999999999877653 6
Q ss_pred cccEEEeCCCccCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000497 1299 GRFAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1374 (1460)
Q Consensus 1299 ~~i~iVpQdp~lf~g-TIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1374 (1460)
+++++|+|++.+|+. |+++|+.+.- ..++.++.+ ...+.++.+||+........+||||||||++|||||+
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~ 153 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIA 153 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHh
Confidence 789999999999987 9999997431 123333222 1233444457777677777899999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcC---CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcH
Q 000497 1375 KSSKVLCLDECTANVDAQTASILQNAISSECK---GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSV 1450 (1460)
Q Consensus 1375 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~---~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~ 1450 (1460)
++|++|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||+||++|++++.|+|+++.+++...
T Consensus 154 ~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p~~~ 233 (362)
T TIGR03258 154 IEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAPADG 233 (362)
T ss_pred cCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcCcH
Confidence 99999999999999999999999999987643 6899999999999765 8999999999999999999999887655
Q ss_pred H
Q 000497 1451 F 1451 (1460)
Q Consensus 1451 f 1451 (1460)
|
T Consensus 234 ~ 234 (362)
T TIGR03258 234 F 234 (362)
T ss_pred H
Confidence 5
No 173
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-39 Score=375.13 Aligned_cols=218 Identities=29% Similarity=0.436 Sum_probs=184.8
Q ss_pred EEEEEEEEEecCCC---CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCC----CChHH
Q 000497 1224 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----TPVRD 1296 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~----i~~~~ 1296 (1460)
++++|++++|+... .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996432 469999999999999999999999999999999999999999999999999863 34667
Q ss_pred HhcccEEEeCCC--ccCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000497 1297 LRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1370 (1460)
Q Consensus 1297 lR~~i~iVpQdp--~lf~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LA 1370 (1460)
.|++++|+||+| .+|+.|+++|+.+.. ..+.++..+ ...+.++.+||+. ........||+|||||++||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lA 157 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQ-----KAREMIELVGLPEELLARSPFELSGGQMRRVAIA 157 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHH
Confidence 888999999998 688889999996431 123333222 1233444557753 34666778999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1371 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1371 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
|||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 158 raL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 236 (290)
T PRK13634 158 GVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFAD 236 (290)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999987643 7899999999999865 899999999999999999998764
No 174
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=2e-36 Score=365.29 Aligned_cols=493 Identities=19% Similarity=0.198 Sum_probs=341.2
Q ss_pred HHhhhhhhhhhhccccCCC---CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc
Q 000497 915 SRNGNDLWLSYWVDTTGSS---QTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFF 991 (1460)
Q Consensus 915 ~~~~~~~wl~~w~~~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff 991 (1460)
.....++|+..|.....+. .........+.+|.+++.+..++...+.++......+.-..+-+.++++.+...-.|+
T Consensus 58 ~~v~~~v~~~~w~~~~~~aL~~~d~~~f~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~ 137 (604)
T COG4178 58 LSVRGQVLLNDWNGPFYNALARRDLAAFWQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYR 137 (604)
T ss_pred HHhheeeeeHhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence 3344566777775432110 0011122345677777777777777888888888888888899999999988774443
Q ss_pred cccCh-----hhHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHhhhhHHH--------------HHH----HHHHHHHH
Q 000497 992 DQTPG-----GRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSY--------------VQV----FFLLLLVP 1048 (1460)
Q Consensus 992 ~~~~~-----G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~i~~--------------~~~----~~~~~~ip 1048 (1460)
..... -+.=+|+.+|+...-+..-.....++.++++++...+++.- ..| |++++.++
T Consensus 138 l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~ 217 (604)
T COG4178 138 LAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAI 217 (604)
T ss_pred HHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHH
Confidence 33222 23446899998877665544455555555555444333321 111 11122222
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 1049 FW-FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLS 1127 (1460)
Q Consensus 1049 ~~-~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~ 1127 (1460)
+. .+..++.+...+..-+..++|..-|. ...-.-+....|-.|+-|+...++..+..+...+.+......+.+++
T Consensus 218 ~~s~~~~~iGr~Li~LN~~~~~~EA~fR~----~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~ 293 (604)
T COG4178 218 SASLLTHLIGRPLIRLNFERQKLEADFRY----SLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLT 293 (604)
T ss_pred HHHHHHHHHccccccccHHHHHHHHHHHH----HHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 21 12234455555555555555555443 33445567778889999988887777766666666555555555554
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----
Q 000497 1128 LRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV---- 1203 (1460)
Q Consensus 1128 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~---- 1203 (1460)
..-...+-+.+.+-.+.+. ...-.+..+-|.+..+.....++...++|++..+.++.+-...+.|+.+|.+.
T Consensus 294 ~~~~gy~~~s~v~P~li~a----p~~f~g~i~~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~ 369 (604)
T COG4178 294 WFQLGYGWLSVVLPILIAA----PRYFSGQITFGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAA 369 (604)
T ss_pred HhhhhhhHHHHHHHHHhcc----HhhhcCcChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4433333222211111100 01113445677788888888889999999999999999999999999998632
Q ss_pred --cccccccCC-CCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCc
Q 000497 1204 --PQEELCGYQ-SLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1280 (1460)
Q Consensus 1204 --~~E~~~~~~-~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G 1280 (1460)
+++...... .....-..+..|+|+|++..-+++. ..++++||+|+|||.+-|.|+||||||||+++|.|+.+--+|
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G 448 (604)
T COG4178 370 QMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSG 448 (604)
T ss_pred cCcccccCcccccccccccccceeEEeeeeEECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCC
Confidence 222111100 0000000157899999999986554 789999999999999999999999999999999999999999
Q ss_pred eEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcC-cCCC--CChHHHHHHHHHhcHHHHHHhC-CCchhhhcCC
Q 000497 1281 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLD-PFHM--NDDLKIWSVLEKCHVKEEVEAV-GLETFVKESG 1356 (1460)
Q Consensus 1281 ~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLd-p~~~--~sd~ei~~aL~~~~l~~~i~~l-gLdt~v~e~G 1356 (1460)
+|..-. -+++-++||.|.+-.||+||-|. |... ++|+|+.++|.+|+|.+.++++ +.+. - .
T Consensus 449 ~I~~P~-----------~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~~-W---~ 513 (604)
T COG4178 449 RISMPA-----------DSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEEDR-W---D 513 (604)
T ss_pred ceecCC-----------CCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccCc-H---h
Confidence 986631 23589999999999999999985 4333 7899999999999999999987 4433 2 2
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeC
Q 000497 1357 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDH 1431 (1460)
Q Consensus 1357 ~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~ 1431 (1460)
.-||+||||||++||.+|++||+++||||||+||.+++..+.+.++++..++|||.|+||.....-.++.+-+++
T Consensus 514 ~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 514 RVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred hhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 359999999999999999999999999999999999999999999999999999999999877776777766643
No 175
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=351.54 Aligned_cols=191 Identities=31% Similarity=0.390 Sum_probs=162.5
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--------cEEE
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAY 677 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~y 677 (1460)
.+.+++++..|.. ..+|+|+||+|++||+++|+|||||||||||++|+|...|++|+|.++| .+||
T Consensus 3 ~l~i~~v~~~f~~------~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~ 76 (248)
T COG1116 3 LLEIEGVSKSFGG------VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGY 76 (248)
T ss_pred eEEEEeeEEEeCc------eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEE
Confidence 4678888888764 3459999999999999999999999999999999999999999999987 5899
Q ss_pred EcCCCCCCC-ccHHHHHccCCCCC-------hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHH
Q 000497 678 VPQVPWILS-GTIRDNILFGKNYD-------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 749 (1460)
Q Consensus 678 ~~Q~p~l~~-~ti~~nI~~g~~~~-------~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARal 749 (1460)
|+|++-|+. -||+|||.||.+.. +++..+.++..+|...-+..|. .||||||||||||||+
T Consensus 77 vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiARAL 145 (248)
T COG1116 77 VFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIARAL 145 (248)
T ss_pred EeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHHHH
Confidence 999998776 59999999986541 3467788888888766655554 8999999999999999
Q ss_pred ccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeC--CeEE
Q 000497 750 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDK--GQVK 813 (1460)
Q Consensus 750 y~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~--G~i~ 813 (1460)
..+|++|||||||+|||+.|+.++-+.++.-....++|+++|||++++.- -+|||++|.+ |+|.
T Consensus 146 ~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 146 ATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred hcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 99999999999999999999998877643222334689999999999855 5999999998 4453
No 176
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=375.15 Aligned_cols=218 Identities=26% Similarity=0.413 Sum_probs=191.3
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
..|+++||+.+|+ ...+++|+||+|++||.+.+.|||||||||++++|.||..|++|+|.+||.|+..+|++ ++.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 4699999999997 35799999999999999999999999999999999999999999999999999999987 6799
Q ss_pred EEEeCCCccCCc-cHHHhcCcCCC----CChH----HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFHM----NDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1372 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~~----~sd~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1372 (1460)
++|+|+.-||+- ||++|+.++-. ..++ ++.++|+.++|. ..-......|||||+||++||||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~---------~~~~R~p~qLSGGQqQRVALARA 150 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLE---------GFADRKPHQLSGGQQQRVALARA 150 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCch---------hhhhhChhhhChHHHHHHHHHHH
Confidence 999999999986 99999976533 2333 445555555544 44455667899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCc
Q 000497 1373 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1449 (1460)
Q Consensus 1373 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~ 1449 (1460)
|..+|++|+||||-|+||.+-...+|.-+++.. .|.|.|+|||+-++... +|||+||++|+|...|+|+|+..++.+
T Consensus 151 L~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P~~ 230 (352)
T COG3842 151 LVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPAT 230 (352)
T ss_pred hhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCcch
Confidence 999999999999999999999999988887653 38999999999987654 799999999999999999999999887
Q ss_pred HHH
Q 000497 1450 VFS 1452 (1460)
Q Consensus 1450 ~f~ 1452 (1460)
.|-
T Consensus 231 ~fV 233 (352)
T COG3842 231 RFV 233 (352)
T ss_pred HHH
Confidence 664
No 177
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-39 Score=366.75 Aligned_cols=226 Identities=26% Similarity=0.373 Sum_probs=188.5
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCCCChHHH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTPVRDL 1297 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i~~~~l 1297 (1460)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999964 4699999999999999999999999999999999999974 69999999999998888889
Q ss_pred hcccEEEeCCCccC-CccHHHhcCcCCC---C--C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1298 RGRFAVVPQSPFLF-EGSLRDNLDPFHM---N--D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1298 R~~i~iVpQdp~lf-~gTIR~NLdp~~~---~--s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
|++++|+||+|.+| +.|+++|+.+... . . ++++.++++.+++.+.+ +........+||||||||+
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgG~~qrv 155 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEV-----KDRLDAPAGKLSGGQQQRL 155 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcch-----hhhhcCCcccCCHHHHHHH
Confidence 99999999999755 5799999964211 0 1 12334444444432211 1234455668999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||++++|+|++|||||++||+.+.+.+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++.++
T Consensus 156 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (250)
T PRK14247 156 CIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVFTN 235 (250)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHHcC
Confidence 999999999999999999999999999999999988767899999999999986 4899999999999999999999876
Q ss_pred CCcHHHHHH
Q 000497 1447 ECSVFSSFV 1455 (1460)
Q Consensus 1447 ~~~~f~~l~ 1455 (1460)
+...+.+.+
T Consensus 236 ~~~~~~~~~ 244 (250)
T PRK14247 236 PRHELTEKY 244 (250)
T ss_pred CccHHHHHH
Confidence 554454433
No 178
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.8e-39 Score=362.13 Aligned_cols=202 Identities=29% Similarity=0.394 Sum_probs=171.4
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HHhcc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1300 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~ 1300 (1460)
++++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999964334699999999999999999999999999999999999999999999999999876543 47889
Q ss_pred cEEEeCCCccCC-ccHHHhcCcCC---CCC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000497 1301 FAVVPQSPFLFE-GSLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1372 (1460)
Q Consensus 1301 i~iVpQdp~lf~-gTIR~NLdp~~---~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1372 (1460)
++|+||+|.+|. .|+++|+.... ... ++++.+++ +.+|++........+||||||||++||||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l---------~~~~l~~~~~~~~~~LSgG~~qrv~lara 152 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAAL---------EKVGLEGKAHALPMQLSGGEQQRVAIARA 152 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHH---------HHcCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 999999999887 49999996421 111 12333334 44455555555566899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeE
Q 000497 1373 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1434 (1460)
Q Consensus 1373 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~I 1434 (1460)
|+++|+||||||||++||.++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++
T Consensus 153 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 153 IVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999998764 47899999999999875 799999999985
No 179
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-39 Score=361.17 Aligned_cols=206 Identities=29% Similarity=0.447 Sum_probs=174.3
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. .+++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEEE
Confidence 478999999964 469999999999999999999999999999999999999999999999999986543 4778999
Q ss_pred EeCCCccCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1304 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1304 VpQdp~lf~-gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+||+|.+|. .|+++|+..... .+.++..+ .+.+.++.+|++........+||||||||++|||||+++|++
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~ 151 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRA-----RVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSL 151 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998886 599999964311 11111111 123444555776666666778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEc
Q 000497 1380 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1438 (1460)
|||||||++||.++.+.+.+.|++.. .++|||++||+++.+.+ ||+|++|++|++++.|
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 152 LLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999998764 37899999999998865 8999999999998865
No 180
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.7e-39 Score=362.99 Aligned_cols=206 Identities=29% Similarity=0.390 Sum_probs=175.4
Q ss_pred EEEEEEEEEecCCC--CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHH----H
Q 000497 1224 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD----L 1297 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~----l 1297 (1460)
|+++|++++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996421 46999999999999999999999999999999999999999999999999998876432 4
Q ss_pred hcccEEEeCCCccCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000497 1298 RGRFAVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1298 R~~i~iVpQdp~lf~g-TIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1373 (1460)
|++++|+||+|.+|.+ |+++|+..... ....+. ...+.+.++.+|++........+||||||||++||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al 155 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARAL 155 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHH
Confidence 6789999999999987 99999965321 111111 11234455556777777777789999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeE
Q 000497 1374 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHL 1434 (1460)
Q Consensus 1374 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~I 1434 (1460)
+++|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|++
T Consensus 156 ~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 156 ANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred ccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999988754 7999999999999888999999999974
No 181
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-39 Score=371.19 Aligned_cols=220 Identities=23% Similarity=0.379 Sum_probs=187.6
Q ss_pred cEEEEEEEEEecCC-CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1223 LIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
.|+++||+++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743 24699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEeCCC--ccCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1302 AVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1302 ~iVpQdp--~lf~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
+|+||+| .++..|+.+|+.+.. ..+++++++. ..+.++.+|++.........||||||||++|||||+++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lAraL~~~ 158 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKR-----VDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALR 158 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 9999998 467789999996431 1233332211 12223333555455556678999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
|+||||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|++++++++.
T Consensus 159 p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (277)
T PRK13642 159 PEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFATS 231 (277)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcCH
Confidence 999999999999999999999999987653 79999999999999889999999999999999999998643
No 182
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.5e-39 Score=366.30 Aligned_cols=219 Identities=22% Similarity=0.368 Sum_probs=187.2
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hcccE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1302 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1302 (1460)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 3 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 3 LYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred EEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 789999999964 469999999999999999999999999999999999999999999999999988776643 56799
Q ss_pred EEeCCCccCCc-cHHHhcCcCCCCChHHH-------HHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000497 1303 VVPQSPFLFEG-SLRDNLDPFHMNDDLKI-------WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1374 (1460)
Q Consensus 1303 iVpQdp~lf~g-TIR~NLdp~~~~sd~ei-------~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1374 (1460)
++||++.+|++ |+++|+....... ..+ .....+..+.+.++.+|++........+||+|||||++||||++
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~laral~ 159 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRD-KSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIGMLLM 159 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcc-cccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHh
Confidence 99999999987 9999997532110 000 00011122344555557777777777899999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1375 KSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1375 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
++|++|+|||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 160 ~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 160 QDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred cCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 999999999999999999999999999987668999999999999975 89999999999999999999875
No 183
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.2e-39 Score=378.36 Aligned_cols=226 Identities=23% Similarity=0.386 Sum_probs=189.0
Q ss_pred cEEEEEEEEEecCC-----------CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCC
Q 000497 1223 LIEFQNVTMRYKPS-----------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN 1291 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~-----------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~ 1291 (1460)
.++++|++++|+.. ...+++||||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 58999999999631 2468999999999999999999999999999999999999999999999999998
Q ss_pred CChH---HHhcccEEEeCCC--ccCC-ccHHHhcCc----CC-CCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCC
Q 000497 1292 TPVR---DLRGRFAVVPQSP--FLFE-GSLRDNLDP----FH-MNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISF 1359 (1460)
Q Consensus 1292 i~~~---~lR~~i~iVpQdp--~lf~-gTIR~NLdp----~~-~~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~L 1359 (1460)
++.+ .+|++++||+|+| .+++ .||++|+.. +. ..+.++..+. ..+.++.+|++ .........|
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~-----~~~~l~~vgl~~~~~~~~p~~L 162 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDR-----VKAMMLKVGLLPNLINRYPHEF 162 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHcCCChHHhcCCcccC
Confidence 8754 3678999999999 4774 699999852 11 1233333221 12334445663 3456667789
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEE
Q 000497 1360 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVE 1436 (1460)
Q Consensus 1360 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE 1436 (1460)
|||||||++|||||+.+|++||+||||++||..+...+.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|
T Consensus 163 SgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive 242 (331)
T PRK15079 163 SGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVE 242 (331)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999987643 7899999999999976 89999999999999
Q ss_pred EcChhHHhccCCcHHHH
Q 000497 1437 QGNPQTLLQDECSVFSS 1453 (1460)
Q Consensus 1437 ~G~p~eLl~~~~~~f~~ 1453 (1460)
.|+++++++++...|.+
T Consensus 243 ~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 243 LGTYDEVYHNPLHPYTK 259 (331)
T ss_pred EcCHHHHHcCCCCHHHH
Confidence 99999999876555544
No 184
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-39 Score=373.00 Aligned_cols=219 Identities=25% Similarity=0.370 Sum_probs=183.9
Q ss_pred cEEEEEEEEEecCCC---CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCC--------
Q 000497 1223 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN-------- 1291 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~-------- 1291 (1460)
.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 389999999996432 269999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CChHHHhcccEEEeCCC--ccCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCc-
Q 000497 1292 ----------------TPVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLE- 1349 (1460)
Q Consensus 1292 ----------------i~~~~lR~~i~iVpQdp--~lf~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLd- 1349 (1460)
.+...+|++++||||+| .+|..|+++|+.+.. ..+.+++.+. ..+.++.+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~ 156 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKR-----AAKYIELVGLDE 156 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHcCCCh
Confidence 13457889999999987 678889999997532 1233333221 22334445775
Q ss_pred hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEE
Q 000497 1350 TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEIL 1427 (1460)
Q Consensus 1350 t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIl 1427 (1460)
...+....+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||+
T Consensus 157 ~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~ 236 (305)
T PRK13651 157 SYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTI 236 (305)
T ss_pred hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEE
Confidence 45667778999999999999999999999999999999999999999999998763 48999999999998754 89999
Q ss_pred EEeCCeEEEEcChhHHhcc
Q 000497 1428 ILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1428 Vl~~G~IvE~G~p~eLl~~ 1446 (1460)
+|++|++++.|+++++.++
T Consensus 237 vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 237 FFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEECCEEEEECCHHHHhcC
Confidence 9999999999999998865
No 185
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-36 Score=336.22 Aligned_cols=472 Identities=19% Similarity=0.250 Sum_probs=322.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhccchHHHHHHHH
Q 000497 943 LVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILL 1022 (1460)
Q Consensus 943 l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~ 1022 (1460)
+.-|+++..+..+...+........+.+...+++.++.++++.+|+.-+++-..++++.++++|+..|.-.. ..+..+.
T Consensus 51 l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~-s~lp~~~ 129 (546)
T COG4615 51 LPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAF-SRLPELV 129 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehH-hhhHHHH
Confidence 333333333444444555666778889999999999999999999999999999999999999999998322 2333455
Q ss_pred HHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcChHHHHhcCcHHH--
Q 000497 1023 ANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDY-- 1100 (1460)
Q Consensus 1023 ~~~~~~l~~~~~i~~~~~~~~~~~ip~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIraf~~e~~-- 1100 (1460)
+.....++..+.+++.+|.+..+.+..+++..+.+...++..-+--+...++...++.+++-.++|-+..+..+--.+
T Consensus 130 qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~ 209 (546)
T COG4615 130 QAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYV 209 (546)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHH
Confidence 666667778888888888766655544443333222111111111111123334678899999999998887654332
Q ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHH
Q 000497 1101 FMAKFKEHVVLYQR----TSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSL 1176 (1460)
Q Consensus 1101 ~~~~~~~~~d~~~~----~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~ 1176 (1460)
+.+.+...-....+ ..........|-++.+-. ++..+..++.. . ... +...........+-+-++
T Consensus 210 h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~----lIGlvf~lal~--~-~w~----st~~a~tivlvlLflr~p 278 (546)
T COG4615 210 HNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLG----LIGLVFWLALS--L-GWA----STNVAATIVLVLLFLRTP 278 (546)
T ss_pred HhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHH----HHHHHHHHHHh--h-ccc----hhhHHHHHHHHHHHHhhH
Confidence 23333221111111 111111233443332211 11111111111 0 110 011111111122334567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEE
Q 000497 1177 LGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGI 1256 (1460)
Q Consensus 1177 l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgI 1256 (1460)
+.+++..++.+-++.+|..|+.++...|+.+.-....+.|+| ..||++||.|.|.+.. --+..||++|+.||.|-|
T Consensus 279 L~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~~~q~~p~~---~~lelrnvrfay~~~~-FhvgPiNl~ikrGelvFl 354 (546)
T COG4615 279 LLSAVGILPTLLTAQVAFNKIAKLELAPYKADFPRPQAFPDW---KTLELRNVRFAYQDNA-FHVGPINLTIKRGELVFL 354 (546)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHhhcCCccccCCCCCcCCcc---cceeeeeeeeccCccc-ceecceeeEEecCcEEEE
Confidence 888888899999999999999998764432221122233345 3699999999997653 457889999999999999
Q ss_pred ECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHH
Q 000497 1257 VGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEK 1336 (1460)
Q Consensus 1257 vGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~ 1336 (1460)
+|.|||||||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|.-|-+||+.++ -|.+..+.+.+..-|++
T Consensus 355 iG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll----~~e~~as~q~i~~~Lqr 430 (546)
T COG4615 355 IGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL----GPEGKASPQLIEKWLQR 430 (546)
T ss_pred ECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh----CCccCCChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998754 33344566666666666
Q ss_pred hcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHh--cCCcEEEEec
Q 000497 1337 CHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSE--CKGMTVITIA 1414 (1460)
Q Consensus 1337 ~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~--~~~~TvI~Ia 1414 (1460)
..+.....-. |-... ...||-|||.|+++--|++-+.+|+++||=-+.-|+.=.+...+.+-.. -+||||+.||
T Consensus 431 Lel~~ktsl~--d~~fs--~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIs 506 (546)
T COG4615 431 LELAHKTSLN--DGRFS--NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAIS 506 (546)
T ss_pred HHHhhhhccc--CCccc--ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEe
Confidence 5554332211 11111 1259999999999999999999999999999999999999887766433 2599999999
Q ss_pred cChhhHhhcCEEEEEeCCeEEEEc
Q 000497 1415 HRISTVLNMDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1415 Hrl~ti~~~DrIlVl~~G~IvE~G 1438 (1460)
|+-.....+||++.|++|+++|.-
T Consensus 507 HDd~YF~~ADrll~~~~G~~~e~t 530 (546)
T COG4615 507 HDDHYFIHADRLLEMRNGQLSELT 530 (546)
T ss_pred cCchhhhhHHHHHHHhcCceeecc
Confidence 999999999999999999999863
No 186
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.8e-38 Score=364.71 Aligned_cols=217 Identities=27% Similarity=0.379 Sum_probs=189.9
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcc
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1300 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1300 (1460)
.+.|+++|++++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~~----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLVG----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEec----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 4579999999852 4699999999999999999999999999999999999999999999998 3
Q ss_pred cEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1301 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1301 i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
++|+||++.+|++|+++|+.+.....+.++.++++.+++.+.+..+ +.++.+++.+.+||+|||||++||||++++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999865434445667778888888877766 67788888888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHH-HHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccCCcHHHHHH
Q 000497 1379 VLCLDECTANVDAQTASILQNA-ISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1455 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~-I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~ 1455 (1460)
||||||||++||+++.+.+.+. +++..+++|||+|||+++.+..||+|++|++|++++.|+++++.+.. +.|.+.+
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~-~~~~~~~ 256 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLR-PDFSSKL 256 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcc-hHHHHHH
Confidence 9999999999999999888764 45555689999999999999889999999999999999999998643 3454433
No 187
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8.5e-39 Score=362.62 Aligned_cols=217 Identities=29% Similarity=0.472 Sum_probs=186.3
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCC--ChHHHhccc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT--PVRDLRGRF 1301 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i--~~~~lR~~i 1301 (1460)
++++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999963 4699999999999999999999999999999999999999999999999999764 345678899
Q ss_pred EEEeCCCccCC-ccHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1302 AVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1302 ~iVpQdp~lf~-gTIR~NLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
+|+||++.+|. .|+++|+.+.. ..+..+..+ ...+.++.+|++.........||+|||||++||||++++
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 154 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVK 154 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcC
Confidence 99999999886 59999996431 111222111 223455556787777777789999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
|++++|||||++||.++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 155 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 155 PKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 99999999999999999999999998764 47999999999999865 8999999999999999999998654
No 188
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=367.38 Aligned_cols=223 Identities=27% Similarity=0.389 Sum_probs=184.9
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-----CCCceEEECCEeCCC--CChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1295 (1460)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999964 469999999999999999999999999999999999997 479999999999864 3455
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcCCC---CCh-----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---NDD-----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~~~---~sd-----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
.+|+.++++||+|.+|++|+++|+.+... ..+ +++.++++.++++.. .....+....+||+|||||+
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~Gq~qr~ 156 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKE-----TKDNLDRNAQAFSGGQQQRI 156 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcc-----hHHHhccChhhCCHHHHHHH
Confidence 67889999999999999999999975311 111 122333333333210 01234556678999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||++++|+++||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++..+
T Consensus 157 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 236 (251)
T PRK14251 157 CIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMFIA 236 (251)
T ss_pred HHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999987678999999999999876 899999999999999999999876
Q ss_pred CCcHHH
Q 000497 1447 ECSVFS 1452 (1460)
Q Consensus 1447 ~~~~f~ 1452 (1460)
+.-.|.
T Consensus 237 ~~~~~~ 242 (251)
T PRK14251 237 PKKQIT 242 (251)
T ss_pred CCCHHH
Confidence 543343
No 189
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.3e-38 Score=363.51 Aligned_cols=227 Identities=26% Similarity=0.383 Sum_probs=189.1
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCC--------h
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--------V 1294 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~--------~ 1294 (1460)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 3899999999963 36999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhcccEEEeCCCccCC-ccHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000497 1295 RDLRGRFAVVPQSPFLFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1369 (1460)
Q Consensus 1295 ~~lR~~i~iVpQdp~lf~-gTIR~NLdp~----~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1369 (1460)
..+|++++++||+|.+|+ .|+++|+... .....++..+ ...+.++.+|++........+||+|||||++|
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~l 155 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA-----RARELLAKVGLAGKETSYPRRLSGGQQQRVAI 155 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCcchhhCChhhCChHHHHHHHH
Confidence 567889999999999886 5999999642 1112211111 12344555677766677778999999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1370 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1370 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
|||++.+|++|||||||++||.++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 156 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 235 (250)
T PRK11264 156 ARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFADP 235 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcCC
Confidence 999999999999999999999999999999998764 47899999999999876 8999999999999999999997654
Q ss_pred Cc-HHHHHHH
Q 000497 1448 CS-VFSSFVR 1456 (1460)
Q Consensus 1448 ~~-~f~~l~~ 1456 (1460)
.- ..+.++.
T Consensus 236 ~~~~~~~~~~ 245 (250)
T PRK11264 236 QQPRTRQFLE 245 (250)
T ss_pred CCHHHHHHHH
Confidence 32 3344443
No 190
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=5.2e-39 Score=369.84 Aligned_cols=227 Identities=26% Similarity=0.343 Sum_probs=188.9
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HHhc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRG 1299 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~ 1299 (1460)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5899999999953 4699999999999999999999999999999999999999999999999999876643 4578
Q ss_pred ccEEEeCCCccCCc-cHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000497 1300 RFAVVPQSPFLFEG-SLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1374 (1460)
Q Consensus 1300 ~i~iVpQdp~lf~g-TIR~NLdp~----~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1374 (1460)
+++|+||++.+|++ |+++|+... ...+.++.. ....+.++.+|++........+||||||||++||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~ 159 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLH-----STVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA 159 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHh
Confidence 89999999999987 999998642 111211111 11223344456665556666789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHH
Q 000497 1375 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1451 (1460)
Q Consensus 1375 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1451 (1460)
++|++|||||||++||.++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++.+++....
T Consensus 160 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~ 239 (269)
T PRK11831 160 LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQANPDPRV 239 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcCCcHHH
Confidence 99999999999999999999999999987643 7899999999999876 89999999999999999999987654344
Q ss_pred HHHHH
Q 000497 1452 SSFVR 1456 (1460)
Q Consensus 1452 ~~l~~ 1456 (1460)
..++.
T Consensus 240 ~~~~~ 244 (269)
T PRK11831 240 RQFLD 244 (269)
T ss_pred HHHHH
Confidence 44443
No 191
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.2e-39 Score=364.38 Aligned_cols=216 Identities=25% Similarity=0.413 Sum_probs=185.3
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hcccE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1302 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1302 (1460)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 578999999963 469999999999999999999999999999999999999999999999999988776554 56899
Q ss_pred EEeCCCccCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1303 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1303 iVpQdp~lf~g-TIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
++||++.+|++ |+++|+..... ...++.. ..+.+.++.+|++........+||+|||||++||||++++|+
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 153 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPK 153 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999987 99999964321 1111111 123445555678777777778999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+|||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 154 llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 223 (232)
T cd03218 154 FLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAAN 223 (232)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhcC
Confidence 999999999999999999999998764 47899999999987765 899999999999999999998753
No 192
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=7.6e-39 Score=366.51 Aligned_cols=221 Identities=23% Similarity=0.367 Sum_probs=186.9
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCC--------
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT-------- 1292 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i-------- 1292 (1460)
.+.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999964 4699999999999999999999999999999999999999999999999998642
Q ss_pred -----ChHHHhcccEEEeCCCccCCc-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhh-hcCCCCCCh
Q 000497 1293 -----PVRDLRGRFAVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFV-KESGISFSV 1361 (1460)
Q Consensus 1293 -----~~~~lR~~i~iVpQdp~lf~g-TIR~NLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v-~e~G~~LSg 1361 (1460)
....+|++++|+||+|.+|++ |+++|+.... ...+.+. +..+.+.++.+|++... +.....||+
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~gl~~~~~~~~~~~LS~ 155 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEA-----RERAVKYLAKVGIDERAQGKYPVHLSG 155 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHH-----HHHHHHHHHHcCCChhhhhCCcccCCH
Confidence 135678899999999999985 9999996421 1111111 11123445555776554 566778999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcC
Q 000497 1362 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1439 (1460)
Q Consensus 1362 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~ 1439 (1460)
|||||++|||||+++|+++||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|++++.|+
T Consensus 156 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 235 (257)
T PRK10619 156 GQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGA 235 (257)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998764 48999999999999986 89999999999999999
Q ss_pred hhHHhccCC
Q 000497 1440 PQTLLQDEC 1448 (1460)
Q Consensus 1440 p~eLl~~~~ 1448 (1460)
++++.+.+.
T Consensus 236 ~~~~~~~~~ 244 (257)
T PRK10619 236 PEQLFGNPQ 244 (257)
T ss_pred HHHhhhCcc
Confidence 999986543
No 193
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.6e-39 Score=360.41 Aligned_cols=209 Identities=28% Similarity=0.442 Sum_probs=176.5
Q ss_pred EEEEEEEEEecCCC--CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1224 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 68999999996431 269999999999999999999999999999999999999999999999999976 346778999
Q ss_pred EEEeCCCccCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
+++||+|.+|++ |+++|+.... ....++..+ .+.+.++.+|++........+||||||||++||||++++|
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA-----RLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDP 155 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999985321 112222111 1233444456666666677789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEc
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1438 (1460)
++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++++.|
T Consensus 156 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 156 PVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999998764 47999999999998875 7999999999998865
No 194
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-39 Score=382.77 Aligned_cols=220 Identities=28% Similarity=0.393 Sum_probs=186.9
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++|++++|+. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999964 3699999999999999999999999999999999999999999999999999877653 57899
Q ss_pred EEeCCCccCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1303 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1303 iVpQdp~lf~g-TIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
||||++.+|+. |+++|+.+... .+..+..+ ...+.++.+|++........+||||||||++|||||+++|+
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~ 153 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ-----RVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPS 153 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999976 99999975321 22222111 12334444566665666667899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHH
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1451 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1451 (1460)
+||||||||+||.++.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++..++...|
T Consensus 154 lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~~~ 229 (369)
T PRK11000 154 VFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPANRF 229 (369)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 9999999999999999999999987643 7899999999998865 89999999999999999999988766544
No 195
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=4.2e-39 Score=347.67 Aligned_cols=178 Identities=33% Similarity=0.566 Sum_probs=166.2
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++|++++|+...+++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999975434699999999999999999999999999999999999999999999999998766 6678899999
Q ss_pred EeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000497 1304 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1383 (1460)
Q Consensus 1304 VpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1383 (1460)
+||+|.+|+.|+++|+ ..+||+|||||++||||++++|++||||
T Consensus 80 ~~q~~~~~~~tv~~~i------------------------------------~~~LS~G~~qrv~laral~~~p~~lllD 123 (178)
T cd03247 80 LNQRPYLFDTTLRNNL------------------------------------GRRFSGGERQRLALARILLQDAPIVLLD 123 (178)
T ss_pred EccCCeeecccHHHhh------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999997 3479999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEEc
Q 000497 1384 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1384 EaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G 1438 (1460)
|||++||.++.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 124 EP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 124 EPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999998877789999999999999889999999999999865
No 196
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-39 Score=367.22 Aligned_cols=222 Identities=27% Similarity=0.402 Sum_probs=186.6
Q ss_pred CCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCC--C
Q 000497 1220 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--T 1292 (1460)
Q Consensus 1220 ~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i 1292 (1460)
+.+.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3568999999999963 4699999999999999999999999999999999999975 89999999999975 3
Q ss_pred ChHHHhcccEEEeCCCccCCccHHHhcCcCCC---C--C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhH
Q 000497 1293 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N--D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1363 (1460)
Q Consensus 1293 ~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~---~--s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQ 1363 (1460)
+...+|++++++||+|.+|++|+++|+..... . + ++++.++++.+++.+.+ ....+..+.+||+||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq 168 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-----KDRLHEPGTGLSGGQ 168 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-----hHHhhCCcccCCHHH
Confidence 45678899999999999999999999964211 1 1 12233444444432211 123456677899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhH
Q 000497 1364 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1442 (1460)
Q Consensus 1364 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~e 1442 (1460)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 248 (267)
T PRK14235 169 QQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEK 248 (267)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999887667899999999999865 79999999999999999999
Q ss_pred HhccCC
Q 000497 1443 LLQDEC 1448 (1460)
Q Consensus 1443 Ll~~~~ 1448 (1460)
+..++.
T Consensus 249 ~~~~~~ 254 (267)
T PRK14235 249 MFTNPD 254 (267)
T ss_pred HHhCCC
Confidence 986544
No 197
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.3e-38 Score=363.75 Aligned_cols=218 Identities=30% Similarity=0.483 Sum_probs=186.0
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCC----------
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---------- 1293 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---------- 1293 (1460)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 579999999963 46999999999999999999999999999999999999999999999999997653
Q ss_pred ---hHHHhcccEEEeCCCccCC-ccHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000497 1294 ---VRDLRGRFAVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1365 (1460)
Q Consensus 1294 ---~~~lR~~i~iVpQdp~lf~-gTIR~NLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1365 (1460)
...+|++++++||++.+|+ .|+++|+.... ....++.. ..+.+.++.+|++...+.....||+||||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~q 153 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAE-----KRAMELLDMVGLADKADHMPAQLSGGQQQ 153 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCChhHhhcChhhcCHHHHH
Confidence 2467889999999999886 69999996421 11211111 12344555557776677777899999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhH
Q 000497 1366 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1442 (1460)
Q Consensus 1366 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~e 1442 (1460)
|++||||++++|+++||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.+ |||+++|++|++++.|++++
T Consensus 154 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T TIGR03005 154 RVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDE 233 (252)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999987653 7899999999999865 89999999999999999999
Q ss_pred HhccCC
Q 000497 1443 LLQDEC 1448 (1460)
Q Consensus 1443 Ll~~~~ 1448 (1460)
+.+++.
T Consensus 234 ~~~~~~ 239 (252)
T TIGR03005 234 IFRQPK 239 (252)
T ss_pred HhcCCC
Confidence 987654
No 198
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4.9e-39 Score=360.12 Aligned_cols=207 Identities=25% Similarity=0.384 Sum_probs=175.6
Q ss_pred EEEEEEEEEecCCC--CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHH---Hh
Q 000497 1224 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1298 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1298 (1460)
++++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996422 46999999999999999999999999999999999999999999999999998877654 34
Q ss_pred -cccEEEeCCCccCC-ccHHHhcCcC---CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000497 1299 -GRFAVVPQSPFLFE-GSLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1299 -~~i~iVpQdp~lf~-gTIR~NLdp~---~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1373 (1460)
++++|+||+|.+|+ .|+++|+... ......+.. + .+.+.++.+|++.........||||||||++||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~---~--~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral 156 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAK---E--RAYEMLEKVGLEHRINHRPSELSGGERQRVAIARAL 156 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHH---H--HHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 68999999999986 5999999652 112211111 1 123455555777767777778999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCeEE
Q 000497 1374 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLV 1435 (1460)
Q Consensus 1374 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G~Iv 1435 (1460)
+++|+||||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+..+|+|++|++|+++
T Consensus 157 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 157 VNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred hCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999998764 378999999999999889999999999986
No 199
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-39 Score=367.35 Aligned_cols=220 Identities=23% Similarity=0.377 Sum_probs=186.8
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-----CCCceEEECCEeCCC--CCh
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPV 1294 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~ 1294 (1460)
..|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 46999999999953 469999999999999999999999999999999999997 579999999999864 346
Q ss_pred HHHhcccEEEeCCCccCCccHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000497 1295 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1366 (1460)
Q Consensus 1295 ~~lR~~i~iVpQdp~lf~gTIR~NLdp~~----~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1366 (1460)
..+|+.++|+||+|.+|++|+++|+.... ..++ +++.++++.+++.+.+ +...+.....||+|||||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-----~~~~~~~~~~LS~G~~qr 171 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-----KDDLHKSALTLSGGQQQR 171 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-----hhhhcCCcccCCHHHHHH
Confidence 67889999999999999999999996531 1111 2233444444443222 234566777899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1367 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1367 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
++||||++++|++|||||||++||..+.+.+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 172 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 251 (267)
T PRK14237 172 LCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIFT 251 (267)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999988778999999999999865 89999999999999999999987
Q ss_pred cCC
Q 000497 1446 DEC 1448 (1460)
Q Consensus 1446 ~~~ 1448 (1460)
.+.
T Consensus 252 ~~~ 254 (267)
T PRK14237 252 NPK 254 (267)
T ss_pred CCC
Confidence 543
No 200
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4.5e-39 Score=324.13 Aligned_cols=211 Identities=26% Similarity=0.424 Sum_probs=182.2
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|.+++|.++|.. .+ =..+++|++||+|||+||||||||||++++.||..|.+|+|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~-~~---~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGH-LP---MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCc-ce---EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 567899999963 23 257899999999999999999999999999999999999999999999888774 567999
Q ss_pred EeCCCccCCc-cHHHhcCcCC----CC---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1304 VPQSPFLFEG-SLRDNLDPFH----MN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~~----~~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
+.||.-||.- ||++|+..+- +. ..+.+..++.++|+..+.+. -...||||||||++|||+++|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~R---------LP~~LSGGqRQRvALARclvR 146 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKR---------LPGELSGGQRQRVALARCLVR 146 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhh---------CccccCchHHHHHHHHHHHhc
Confidence 9999999987 9999986542 22 23457777777777665543 344799999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCc
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1449 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~ 1449 (1460)
+.+||+||||.|+||+.-...+...+.+.. ++.|+++|||.++.+.. +||++++++|||++.|+-+++++.++.
T Consensus 147 ~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~~ 223 (231)
T COG3840 147 EQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKAS 223 (231)
T ss_pred cCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCCh
Confidence 999999999999999999999988887664 47899999999998865 799999999999999999999987653
No 201
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=8.4e-39 Score=380.21 Aligned_cols=221 Identities=25% Similarity=0.444 Sum_probs=189.3
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
..++++|++++|.. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 35999999999963 4699999999999999999999999999999999999999999999999999887764 5789
Q ss_pred EEEeCCCccCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
++|+|++.+|+. |+++|+.+.-. .++.++.+ .+.+.++.+|++........+||||||||++|||||+++|
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P 163 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP-----RVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKP 163 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999976 99999975321 22222211 1223344446666666677789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHH
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1451 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1451 (1460)
++|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. +|||++|++|+|++.|+|+++.+++...|
T Consensus 164 ~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~~~~ 240 (375)
T PRK09452 164 KVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLF 240 (375)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 99999999999999999999999987653 7999999999998765 89999999999999999999998876555
No 202
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-39 Score=366.18 Aligned_cols=220 Identities=28% Similarity=0.413 Sum_probs=183.5
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhcc---CCC--CCceEEECCEeCCCC--ChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL---TPI--CGGQILVDGLNIINT--PVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl---~~~--~~G~I~IDG~di~~i--~~~ 1295 (1460)
.++++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 5899999999964 4699999999999999999999999999999999997 454 589999999999754 346
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcCC---CCCh-----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDD-----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~~---~~sd-----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
.+|++++|+||+|.+|++|+++|+.... ...+ ++++++++.+++.+.+ +...+..+.+||+|||||+
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv 155 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEV-----KDKLKESAFALSGGQQQRL 155 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcch-----hhhhhCCcccCCHHHHHHH
Confidence 7788999999999999999999996421 1111 1233333333332111 2345666778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||++++|+|+||||||++||+++.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 156 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~~ 235 (250)
T PRK14245 156 CIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFTN 235 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999999999987778999999999999865 899999999999999999999876
Q ss_pred CCc
Q 000497 1447 ECS 1449 (1460)
Q Consensus 1447 ~~~ 1449 (1460)
+..
T Consensus 236 ~~~ 238 (250)
T PRK14245 236 PEK 238 (250)
T ss_pred CCC
Confidence 543
No 203
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-39 Score=345.52 Aligned_cols=196 Identities=29% Similarity=0.396 Sum_probs=167.4
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.+++++|+.+|.. ..||+||||+|++||.|+|+||||||||||++++.|+..|++|+|.+||.++..- ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 5899999999975 5799999999999999999999999999999999999999999999999988433 45799
Q ss_pred EEeCCCccCCc-cHHHhcCcCCCC---Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000497 1303 VVPQSPFLFEG-SLRDNLDPFHMN---DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1374 (1460)
Q Consensus 1303 iVpQdp~lf~g-TIR~NLdp~~~~---sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1374 (1460)
||+|++.||+- ||++|+...-+. +. +...+.|+.+ ||...-+.-...||||||||++|||||+
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~V---------gL~~~~~~~P~qLSGGMrQRVaiARAL~ 146 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELV---------GLAGFEDKYPHQLSGGMRQRVAIARALA 146 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHc---------CCcchhhcCccccChHHHHHHHHHHHHh
Confidence 99999999997 999998654322 21 2233444444 5555556667789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hcCEEEEEeC--CeE
Q 000497 1375 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDH--GHL 1434 (1460)
Q Consensus 1375 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlVl~~--G~I 1434 (1460)
.+|+||+||||.++||+.|...+|+-+.+.. .++||++|||++++.. -+|||+||.+ |+|
T Consensus 147 ~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 147 TRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred cCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999887764 3699999999999865 4799999999 555
No 204
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-39 Score=369.62 Aligned_cols=220 Identities=28% Similarity=0.460 Sum_probs=188.5
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCC---ceEEECCEeCCCCChHHHh
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG---GQILVDGLNIINTPVRDLR 1298 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~---G~I~IDG~di~~i~~~~lR 1298 (1460)
+.|+++|++++|++...++|+|+||+|++||.+||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999996543469999999999999999999999999999999999999987 8999999999888777889
Q ss_pred cccEEEeCCC--ccCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000497 1299 GRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1299 ~~i~iVpQdp--~lf~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1373 (1460)
++++|+||+| .+++.|+++|+.+.. ..++++..+ ...+.++.+|++...+....+||+|||||++|||||
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LS~G~~qrv~laral 158 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIK-----IVRDVLADVGMLDYIDSEPANLSGGQKQRVAIAGIL 158 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHH
Confidence 9999999998 466889999997431 123322211 122334444666666667779999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1374 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1374 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+++|++|||||||++||..+.+.+.+.|++..+ ++|||++||+++.+..||||++|++|++++.|+++++..+
T Consensus 159 ~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 159 AVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999987653 7899999999999988999999999999999999998764
No 205
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=367.52 Aligned_cols=220 Identities=23% Similarity=0.405 Sum_probs=187.2
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.++++|++++|+....++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 58999999999754446999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEeCCCc--cCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1303 VVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1303 iVpQdp~--lf~gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
|+||+|. ++..|+++|+..... ...++..+ .+.+.++.+|++........+||+|||||++||||++++|
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR-----RVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNP 161 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 9999994 445589999864311 12222211 1223344446655556667789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||||++|++|++++.|+++++.++.
T Consensus 162 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 233 (269)
T PRK13648 162 SVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDHA 233 (269)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcCH
Confidence 99999999999999999999999987643 78999999999999889999999999999999999997653
No 206
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-39 Score=370.84 Aligned_cols=218 Identities=30% Similarity=0.463 Sum_probs=185.0
Q ss_pred EEEEEEEEEecCCC---CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCC----ChHH
Q 000497 1224 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRD 1296 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~~ 1296 (1460)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999996432 3699999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhcccEEEeCCC--ccCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000497 1297 LRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1370 (1460)
Q Consensus 1297 lR~~i~iVpQdp--~lf~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LA 1370 (1460)
+|++++|+||+| .+|+.|+++|+.+.. ..++++..+. ..+.++.+|++. .......+||||||||++||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la 157 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALVGISESLFEKNPFELSGGQMRRVAIA 157 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCChhhhhCCcccCCHHHHHHHHHH
Confidence 888999999998 578899999996421 1223222211 233444557763 45666778999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1371 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1371 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
||++++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 158 GILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998764 37899999999999865 899999999999999999998764
No 207
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=374.96 Aligned_cols=226 Identities=25% Similarity=0.403 Sum_probs=186.9
Q ss_pred cEEEEEEEEEecCC--------CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh
Q 000497 1223 LIEFQNVTMRYKPS--------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV 1294 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~--------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~ 1294 (1460)
.|+++|++++|+.. ...+|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 58999999999631 2468999999999999999999999999999999999999999999999999988875
Q ss_pred H---HHhcccEEEeCCCc--cCCc-cHHHhcCc----CCCCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhH
Q 000497 1295 R---DLRGRFAVVPQSPF--LFEG-SLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQ 1363 (1460)
Q Consensus 1295 ~---~lR~~i~iVpQdp~--lf~g-TIR~NLdp----~~~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQ 1363 (1460)
. .+|+++++|||||. +++. |+.+|+.. .......+. +....+.++.+|++. ........|||||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~gL~~~~~~~~p~~LSgGq 159 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAER-----REKALAMMAKVGLRPEHYDRYPHMFSGGQ 159 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHCCCChHHhcCCCccCCHHH
Confidence 3 56889999999994 5554 89888742 111122111 112234444456643 3455667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcCh
Q 000497 1364 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1440 (1460)
Q Consensus 1364 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1440 (1460)
|||++|||||+.+|++||+||||++||..+.+.|.+.|++.. .+.|+|+|||+++.+.. ||||+||++|+|+|.|++
T Consensus 160 ~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~ 239 (327)
T PRK11308 160 RQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTK 239 (327)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999998764 38999999999999975 899999999999999999
Q ss_pred hHHhccCCcHHHH
Q 000497 1441 QTLLQDECSVFSS 1453 (1460)
Q Consensus 1441 ~eLl~~~~~~f~~ 1453 (1460)
+++++++...|.+
T Consensus 240 ~~~~~~p~hpyt~ 252 (327)
T PRK11308 240 EQIFNNPRHPYTQ 252 (327)
T ss_pred HHHhcCCCCHHHH
Confidence 9999876555554
No 208
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=7.9e-39 Score=353.66 Aligned_cols=197 Identities=30% Similarity=0.473 Sum_probs=178.4
Q ss_pred EEEEEEEEEecCCC---CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcc
Q 000497 1224 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1300 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1300 (1460)
|+++||+++|++.. +++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57999999997542 3699999999999999999999999999999999999999999999999 6
Q ss_pred cEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1301 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1301 i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
++|+||+|.+|++|+++|+.+....++++.+++++.+++.+.+..+ |+++.+++.+.+||+|||||++||||++++|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999876555666778888888998888877 88998988889999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHH-HHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCe
Q 000497 1379 VLCLDECTANVDAQTASILQN-AISSEC-KGMTVITIAHRISTVLNMDEILILDHGH 1433 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~-~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl~~G~ 1433 (1460)
+++|||||++||.++.+.+.+ .+++.. ++.|||++||+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999887765 566553 4689999999999998899999999985
No 209
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-39 Score=372.23 Aligned_cols=221 Identities=24% Similarity=0.373 Sum_probs=185.0
Q ss_pred CccEEEEEEEEEecCCC---CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCC----C-
Q 000497 1221 QGLIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----T- 1292 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~----i- 1292 (1460)
.|.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 47899999999996432 259999999999999999999999999999999999999999999999999852 2
Q ss_pred ChHHHhcccEEEeCCC--ccCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHH
Q 000497 1293 PVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQL 1366 (1460)
Q Consensus 1293 ~~~~lR~~i~iVpQdp--~lf~gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQr 1366 (1460)
+...+|++++|+||+| .+|+.|+++|+.+... ...++..+. +.+.++.+|++ ...+....+||+|||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~ll~~~~L~~~~~~~~~~~LS~Gq~qr 158 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK-----VPELLKLVQLPEDYVKRSPFELSGGQKRR 158 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCChhHhcCChhhCCHHHHHH
Confidence 4567888999999998 4678899999964321 222222221 22334444773 44566677899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHH
Q 000497 1367 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1443 (1460)
Q Consensus 1367 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eL 1443 (1460)
++|||||+++|++|||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 159 v~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 238 (289)
T PRK13645 159 VALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEI 238 (289)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998764 37899999999998865 899999999999999999998
Q ss_pred hcc
Q 000497 1444 LQD 1446 (1460)
Q Consensus 1444 l~~ 1446 (1460)
.++
T Consensus 239 ~~~ 241 (289)
T PRK13645 239 FSN 241 (289)
T ss_pred hcC
Confidence 764
No 210
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-39 Score=365.35 Aligned_cols=225 Identities=24% Similarity=0.410 Sum_probs=187.4
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCCC--ChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1295 (1460)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999963 4699999999999999999999999999999999999984 899999999998753 345
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~~----~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
.+|++++++||+|.+|+.|+++|+.... ...+ +++.++++..++.+.+ +...+....+||+|||||+
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~qr~ 155 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-----KSELNKPGTRLSGGQQQRL 155 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-----HHHHhCChhhcCHHHHHHH
Confidence 6788999999999999999999997421 1111 1233344444332211 2335566778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||++++|+||+|||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 156 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (250)
T PRK14262 156 CIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIVER 235 (250)
T ss_pred HHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 9999999999999999999999999999999999987778999999999998765 899999999999999999999876
Q ss_pred CCcHHHHH
Q 000497 1447 ECSVFSSF 1454 (1460)
Q Consensus 1447 ~~~~f~~l 1454 (1460)
+...|.+.
T Consensus 236 ~~~~~~~~ 243 (250)
T PRK14262 236 PKNKLTEE 243 (250)
T ss_pred CCChHHHH
Confidence 54445543
No 211
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-39 Score=365.92 Aligned_cols=219 Identities=22% Similarity=0.379 Sum_probs=183.6
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC--C---CCceEEECCEeCCCC--ChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIINT--PVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~i--~~~ 1295 (1460)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ | ++|+|.+||.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 5899999999963 369999999999999999999999999999999999953 6 499999999999653 345
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcC----CCCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPF----HMNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~----~~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
.+|+.++++||+|.+|+.|+++|+... +...+ +++.++++.+++.+. +....+....+||+|||||+
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~G~~qrv 157 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDE-----VKDRLHDSALGLSGGQQQRV 157 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchh-----HHHHHhcCcccCCHHHHHHH
Confidence 678899999999999999999998642 11111 223334444443221 12345566778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||++++|++|||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 237 (252)
T PRK14239 158 CIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMFMN 237 (252)
T ss_pred HHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999887667999999999998865 899999999999999999999876
Q ss_pred CC
Q 000497 1447 EC 1448 (1460)
Q Consensus 1447 ~~ 1448 (1460)
+.
T Consensus 238 ~~ 239 (252)
T PRK14239 238 PK 239 (252)
T ss_pred CC
Confidence 54
No 212
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-39 Score=364.74 Aligned_cols=220 Identities=29% Similarity=0.439 Sum_probs=185.0
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCC--CCh
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1294 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1294 (1460)
|.|+++||+++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 57999999999964 3699999999999999999999999999999999999863 69999999999875 455
Q ss_pred HHHhcccEEEeCCCccCCccHHHhcCcCCC----CC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000497 1295 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1366 (1460)
Q Consensus 1295 ~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~----~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1366 (1460)
..+|++++|+||+|.+|+.|+++|+..... .+ ++++.++++.+++.+. +....+....+||+|||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDE-----VKDRLKKSALGLSGGQQQR 154 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchh-----hHHHHhcCCCCCCHHHHHH
Confidence 678999999999999999999999964311 11 1223333444433221 1233456677899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1367 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1367 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
++||||++.+|++|+|||||++||+.+.+.+.+.|++..+++|||+|||+++.+.+ ||||++|++|++++.|+++++..
T Consensus 155 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 234 (250)
T PRK14240 155 LCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDLFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999887668999999999998866 89999999999999999999987
Q ss_pred cCC
Q 000497 1446 DEC 1448 (1460)
Q Consensus 1446 ~~~ 1448 (1460)
++.
T Consensus 235 ~~~ 237 (250)
T PRK14240 235 NPK 237 (250)
T ss_pred CCC
Confidence 654
No 213
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-39 Score=366.01 Aligned_cols=223 Identities=23% Similarity=0.375 Sum_probs=185.6
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCCC--Ch
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PV 1294 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~ 1294 (1460)
..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 11 ~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 11 PQIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eeEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 36999999999963 4699999999999999999999999999999999999985 799999999998653 34
Q ss_pred HHHhcccEEEeCCCccCCccHHHhcCcCC---CCChH----HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1295 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1295 ~~lR~~i~iVpQdp~lf~gTIR~NLdp~~---~~sd~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
..+|+.++|+||++.+|+.|+++|+.... ..+.+ ++.++++.+++.+. ++........+||||||||+
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LSgG~~qrv 163 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDE-----TSDRLKSPALSLSGGQQQRL 163 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcc-----hhhhhcCChhhCCHHHHHHH
Confidence 56788999999999999999999996421 12222 23334444333211 12334556678999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+|||||+++|+|++|||||++||.++.+.+.+.|++..+++|+|+|||+++.+.+ ||||++|++|++++.|+++++.++
T Consensus 164 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 243 (258)
T PRK14268 164 CIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFHN 243 (258)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999887668999999999999866 899999999999999999999876
Q ss_pred CCcHH
Q 000497 1447 ECSVF 1451 (1460)
Q Consensus 1447 ~~~~f 1451 (1460)
+...+
T Consensus 244 ~~~~~ 248 (258)
T PRK14268 244 PREKS 248 (258)
T ss_pred CCCHH
Confidence 54433
No 214
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-39 Score=365.90 Aligned_cols=221 Identities=26% Similarity=0.399 Sum_probs=184.1
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-----CCCceEEECCEeCCCCC--hHH
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINTP--VRD 1296 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~i~--~~~ 1296 (1460)
-+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999963 469999999999999999999999999999999999986 47999999999987653 346
Q ss_pred HhcccEEEeCCCccCCccHHHhcCcCC---CC--C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1297 LRGRFAVVPQSPFLFEGSLRDNLDPFH---MN--D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1297 lR~~i~iVpQdp~lf~gTIR~NLdp~~---~~--s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
+|++++|+||+|.+|++|+++|+.... .. . ++++.++++..++.+. +.+.++..+.+||+|||||+
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~Gq~qrv 158 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEE-----LGDRLKDSAFELSGGQQQRL 158 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCch-----hhhHhhcChhhCCHHHHHHH
Confidence 788999999999999999999986421 11 1 1223333333332211 11245566778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||++++|+||||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 238 (251)
T PRK14244 159 CIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIFKN 238 (251)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999887678999999999999875 899999999999999999999887
Q ss_pred CCcHH
Q 000497 1447 ECSVF 1451 (1460)
Q Consensus 1447 ~~~~f 1451 (1460)
+...+
T Consensus 239 ~~~~~ 243 (251)
T PRK14244 239 PQSSK 243 (251)
T ss_pred CCChH
Confidence 65544
No 215
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-39 Score=343.72 Aligned_cols=203 Identities=25% Similarity=0.376 Sum_probs=171.7
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
|+++|++..|.. +.+++|+||+|++||+++++|||||||||+|++|.+.++|++|+|.++|
T Consensus 2 I~~~nvsk~y~~------~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr 75 (309)
T COG1125 2 IEFENVSKRYGN------KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRR 75 (309)
T ss_pred ceeeeeehhcCC------ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHH
Confidence 678999998862 3459999999999999999999999999999999999999999999987
Q ss_pred cEEEEcCCCCCCCc-cHHHHHccCC---CCChH----HHHHHHHHhcchH-HHhhccCCCcccccCCCCccccHHHHHHH
Q 000497 674 SIAYVPQVPWILSG-TIRDNILFGK---NYDPQ----SYSETLKACTLDV-DISLMVGGDMAYIGEKGVNLSGGQRARLA 744 (1460)
Q Consensus 674 ~i~y~~Q~p~l~~~-ti~~nI~~g~---~~~~~----~~~~v~~~~~l~~-di~~~~~gd~t~vg~~g~~LSGGQkqRv~ 744 (1460)
+||||-|+.-||.. ||.|||..-. .++++ +.++.++..+|+. +. .......|||||+|||.
T Consensus 76 ~IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~----------~~RyP~eLSGGQQQRVG 145 (309)
T COG1125 76 KIGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEY----------ADRYPHELSGGQQQRVG 145 (309)
T ss_pred hhhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHH----------hhcCchhcCcchhhHHH
Confidence 69999999998865 9999998743 35654 4556666677764 22 23345589999999999
Q ss_pred HHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcch-hhcCCEEEEEeCCeEEEecCHHHHHh
Q 000497 745 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 745 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~-l~~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
+||||..+|+|+|+||||+||||-+++.+-+....-...-++|+|+|||++++ ++-||||.+|++|+|+..++|+++..
T Consensus 146 v~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 146 VARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred HHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999887766432223347899999999987 55699999999999999999999986
Q ss_pred cc
Q 000497 824 SL 825 (1460)
Q Consensus 824 ~~ 825 (1460)
+.
T Consensus 226 ~P 227 (309)
T COG1125 226 NP 227 (309)
T ss_pred Cc
Confidence 53
No 216
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.1e-38 Score=381.07 Aligned_cols=220 Identities=26% Similarity=0.421 Sum_probs=189.2
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.++++|++++|+. .++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++.+++...+|++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999963 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCcc-CCccHHHhcCcCCC-----C------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000497 1303 VVPQSPFL-FEGSLRDNLDPFHM-----N------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1370 (1460)
Q Consensus 1303 iVpQdp~l-f~gTIR~NLdp~~~-----~------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1370 (1460)
++||++.+ |+.|+++|+..... . +++++.++++.++ +.........+||||||||++||
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vg---------l~~~~~~~~~~LSgGerQRv~IA 151 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTG---------VAQFADRPVTSLSGGERQRVLLA 151 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcC---------CchhhcCChhhCCHHHHHHHHHH
Confidence 99999987 57799999965321 1 1223445555544 44334445568999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHhccCC
Q 000497 1371 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQDEC 1448 (1460)
Q Consensus 1371 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~~~ 1448 (1460)
|||+++|+||+|||||++||..+...+.+.|++.. +++|||+++|+++.+. -||||++|++|++++.|+|++++..+
T Consensus 152 rAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~~- 230 (402)
T PRK09536 152 RALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTAD- 230 (402)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCcH-
Confidence 99999999999999999999999999999998765 4789999999999995 48999999999999999999998643
Q ss_pred cHHHHHH
Q 000497 1449 SVFSSFV 1455 (1460)
Q Consensus 1449 ~~f~~l~ 1455 (1460)
.+.+++
T Consensus 231 -~l~~~~ 236 (402)
T PRK09536 231 -TLRAAF 236 (402)
T ss_pred -HHHHHh
Confidence 344444
No 217
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=367.22 Aligned_cols=219 Identities=27% Similarity=0.440 Sum_probs=183.5
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-----CCCceEEECCEeCCC--CChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1295 (1460)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 6999999999963 469999999999999999999999999999999999865 689999999999965 3445
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcCCC-C---C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM-N---D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~~~-~---s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
.+|++++|+||+|.+|++|+++|+..... . . ++.+.++++..++.+. +....+....+||||||||+
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LSgGq~qrl 173 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDE-----VKDRLHSSALSLSGGQQQRL 173 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcc-----hHHHHhcCcccCCHHHHHHH
Confidence 67889999999999999999999864211 0 1 1223333333332211 12334566778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||++++|+||||||||++||..+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++..+
T Consensus 174 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 253 (268)
T PRK14248 174 CIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIFTS 253 (268)
T ss_pred HHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999987667899999999998865 899999999999999999999876
Q ss_pred CC
Q 000497 1447 EC 1448 (1460)
Q Consensus 1447 ~~ 1448 (1460)
+.
T Consensus 254 ~~ 255 (268)
T PRK14248 254 PK 255 (268)
T ss_pred CC
Confidence 43
No 218
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=364.98 Aligned_cols=221 Identities=24% Similarity=0.366 Sum_probs=184.6
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC--C---CCceEEECCEeCCC--CChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIIN--TPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~--i~~~ 1295 (1460)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 5899999999964 369999999999999999999999999999999999997 3 58999999999864 4456
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcCCC----CChHH----HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~~~----~sd~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
.+|++++|+||+|.+|++|+++|+.+... .++++ +.++++..++.+.+ .........+||+|||||+
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~l~~~~~~LS~Gq~qrv 164 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEV-----KDRLHTQALSLSGGQQQRL 164 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hhhhhCCcccCCHHHHHHH
Confidence 78899999999999999999999964311 12222 22233333322111 2334566778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||++++|+|++|||||++||.++...+.+.|++..+++|+|+|||+++.+.+ ||||++|++|++++.|+++++.++
T Consensus 165 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 244 (259)
T PRK14274 165 CIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMFSN 244 (259)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHhhC
Confidence 9999999999999999999999999999999999987678999999999999875 899999999999999999999876
Q ss_pred CCcH
Q 000497 1447 ECSV 1450 (1460)
Q Consensus 1447 ~~~~ 1450 (1460)
+...
T Consensus 245 ~~~~ 248 (259)
T PRK14274 245 PDDQ 248 (259)
T ss_pred CCCH
Confidence 5443
No 219
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=363.84 Aligned_cols=222 Identities=23% Similarity=0.367 Sum_probs=184.7
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC--C---CCceEEECCEeCCCC--C
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIINT--P 1293 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~i--~ 1293 (1460)
+|.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 467999999999963 469999999999999999999999999999999999986 3 689999999999754 3
Q ss_pred hHHHhcccEEEeCCCccCC-ccHHHhcCcC----CCCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHH
Q 000497 1294 VRDLRGRFAVVPQSPFLFE-GSLRDNLDPF----HMNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQR 1364 (1460)
Q Consensus 1294 ~~~lR~~i~iVpQdp~lf~-gTIR~NLdp~----~~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQr 1364 (1460)
...+|++++++||++.+|. .|+++|+... +..+. +++.++++.+++.+.+ +...+....+||+|||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~ 154 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEV-----KDRLKSNAMELSGGQQ 154 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hHHhhCCcCcCCHHHH
Confidence 4567899999999999988 5999999642 11121 1223333333332211 1234456778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHH
Q 000497 1365 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1443 (1460)
Q Consensus 1365 Qrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eL 1443 (1460)
||++||||++++|++|||||||++||..+.+.+.+.|++..++.|||++||+++.+.. ||||++|++|++++.|+++++
T Consensus 155 qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14256 155 QRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKI 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778899999999999865 899999999999999999999
Q ss_pred hccCCc
Q 000497 1444 LQDECS 1449 (1460)
Q Consensus 1444 l~~~~~ 1449 (1460)
..++..
T Consensus 235 ~~~~~~ 240 (252)
T PRK14256 235 FTTPEK 240 (252)
T ss_pred HhCCCc
Confidence 876543
No 220
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=365.13 Aligned_cols=221 Identities=24% Similarity=0.363 Sum_probs=186.4
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-----CCCceEEECCEeCCC--CC
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TP 1293 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~ 1293 (1460)
.-.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 22 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 22 KVVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred ceEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 346999999999964 369999999999999999999999999999999999997 699999999999853 35
Q ss_pred hHHHhcccEEEeCCCccCCccHHHhcCcCC---CCChH-----HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000497 1294 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDDL-----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1365 (1460)
Q Consensus 1294 ~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~---~~sd~-----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1365 (1460)
...+|++++|+||+|.+|..|+++|+.... ..+++ .+.++++..++.+ ++....+..+.+||+||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~l~~~~~~~~~~LSgGe~q 174 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-----ELKDRLHDNAYGLSGGQQQ 174 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-----hHHHHHhcCcccCCHHHHH
Confidence 567889999999999999999999996421 12221 1223333332211 2334456677789999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHh
Q 000497 1366 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1366 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
|++|||||+++|+||||||||++||..+.+.+.+.|++..+++|+|+|+|+++.+.. ||||++|++|++++.|+++++.
T Consensus 175 rv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 254 (271)
T PRK14238 175 RLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIF 254 (271)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999887778999999999999875 8999999999999999999998
Q ss_pred ccCC
Q 000497 1445 QDEC 1448 (1460)
Q Consensus 1445 ~~~~ 1448 (1460)
.++.
T Consensus 255 ~~~~ 258 (271)
T PRK14238 255 SNPS 258 (271)
T ss_pred cCCC
Confidence 7654
No 221
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-38 Score=366.92 Aligned_cols=221 Identities=25% Similarity=0.366 Sum_probs=183.0
Q ss_pred EEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH----hcc
Q 000497 1225 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGR 1300 (1460)
Q Consensus 1225 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~ 1300 (1460)
.++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 46688888854 468999999999999999999999999999999999999999999999999988765543 468
Q ss_pred cEEEeCCCccCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1301 FAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1301 i~iVpQdp~lf~-gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
++|+||+|.+|+ .|+++|+.... .....+..+ ...+.++.+|++........+||+|||||++||||++++
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lAral~~~ 178 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREE-----RAAEALELVGLEGWEHKYPDELSGGMQQRVGLARALAVD 178 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCHhHhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999885 59999996421 111111111 122334444666556666678999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHHH
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1452 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1452 (1460)
|+||||||||++||..+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++++++...|.
T Consensus 179 p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~~ 257 (269)
T cd03294 179 PDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPANDYV 257 (269)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCcCcHHH
Confidence 99999999999999999999999998764 37999999999998865 899999999999999999999876654443
No 222
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-39 Score=355.38 Aligned_cols=202 Identities=30% Similarity=0.463 Sum_probs=173.9
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++|++++|+. .++++|+||+|++| ++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 i~~~~~~~~~~~--~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK--KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC--EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 579999999964 36999999999999 99999999999999999999999999999999999998776 778999999
Q ss_pred EeCCCccCCc-cHHHhcCcCC---CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1304 VPQSPFLFEG-SLRDNLDPFH---MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~~---~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
+||+|.+|.+ |+++|+.... ..+. +++.++++.. |++........+||+|||||++||||+++
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~la~al~~ 147 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELV---------NLGDRAKKKIGSLSGGMRRRVGIAQALVG 147 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHC---------CCHHHHhCchhhCCHHHHHHHHHHHHHhc
Confidence 9999999986 9999986421 1121 2333444444 44433444556799999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEc
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1438 (1460)
+|+++||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 148 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 148 DPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999987767999999999999875 8999999999998865
No 223
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.1e-39 Score=356.13 Aligned_cols=204 Identities=31% Similarity=0.469 Sum_probs=173.8
Q ss_pred EEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000497 1225 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1304 (1460)
Q Consensus 1225 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iV 1304 (1460)
+++|++++|+.+..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 47899999965334699999999999999999999999999999999999999999999999999888888889999999
Q ss_pred eCCCc--cCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1305 PQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1305 pQdp~--lf~gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
||+|. ++..|+++|+..... .++.+..+ ...+.++.+|++.........||||||||++|||||+++|++
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~l 155 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELVGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDI 155 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99983 677899999965311 12221111 123344555776666677778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCe
Q 000497 1380 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGH 1433 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~ 1433 (1460)
|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|+
T Consensus 156 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 156 LLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999998764 47899999999999987 89999999985
No 224
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-38 Score=359.80 Aligned_cols=219 Identities=25% Similarity=0.386 Sum_probs=185.7
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCC------CChHH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN------TPVRD 1296 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~------i~~~~ 1296 (1460)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 2 SIQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 3789999999964 469999999999999999999999999999999999999999999999998741 23456
Q ss_pred HhcccEEEeCCCccCCc-cHHHhcCcC--C--CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000497 1297 LRGRFAVVPQSPFLFEG-SLRDNLDPF--H--MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1371 (1460)
Q Consensus 1297 lR~~i~iVpQdp~lf~g-TIR~NLdp~--~--~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1371 (1460)
+|++++|+||+|.+|++ |+++|+..+ . ....++.. ..+.+.++.+|++...+....+||||||||++|||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~lar 154 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIAR 154 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHH
Confidence 78899999999999976 999999631 1 11222211 12345555668877777777899999999999999
Q ss_pred HHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCC
Q 000497 1372 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1448 (1460)
Q Consensus 1372 ALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1448 (1460)
|++++|+|+||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.+ ||+|++|++|++++.|+++++.+...
T Consensus 155 al~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~~~ 233 (242)
T PRK11124 155 ALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQPQT 233 (242)
T ss_pred HHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcCccc
Confidence 9999999999999999999999999999998764 48999999999999875 89999999999999999999865433
No 225
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-39 Score=357.97 Aligned_cols=208 Identities=28% Similarity=0.441 Sum_probs=177.0
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREP-REVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcCh-HHHhhcEEE
Confidence 578999999964 46999999999999999999999999999999999999999999999999987633 567889999
Q ss_pred EeCCCccCCc-cHHHhcCcCC---CCC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1304 VPQSPFLFEG-SLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~~---~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
+||++.++++ |+++|+.... ..+ ++++.+++ +.+|++........+||||||||++||||++.
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l---------~~~~l~~~~~~~~~~LS~G~~qr~~la~al~~ 148 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELL---------DFVGLLEAADRLVKTYSGGMRRRLEIARSLVH 148 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHH---------HHcCCHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 9999998876 9999996421 111 12233333 33455544455556899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHH
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1443 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eL 1443 (1460)
+|+++||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 149 RPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999999987642 7899999999999876 899999999999999998875
No 226
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=366.19 Aligned_cols=217 Identities=28% Similarity=0.470 Sum_probs=185.3
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCC-hHHHhcccE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDLRGRFA 1302 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~~lR~~i~ 1302 (1460)
++++|++++|+++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999533 45999999999999999999999999999999999999999999999999998765 467788999
Q ss_pred EEeCCCc--cCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1303 VVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1303 iVpQdp~--lf~gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
++||+|. +++.|+++|+.+... .+..+..+ .+.+.++.+|++.........||+|||||++||||++++|
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRK-----RVDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEP 155 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCC
Confidence 9999985 567899999975321 12222211 1223344457766666677789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||||||++||+.+.+.+.+.|++.. +++|||++||+++.+..||||++|++|++++.|+++++...
T Consensus 156 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 156 ECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999998754 48999999999999988999999999999999999998764
No 227
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.2e-38 Score=366.35 Aligned_cols=221 Identities=25% Similarity=0.400 Sum_probs=184.1
Q ss_pred cEEEEEEEEEecCC-------CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChH
Q 000497 1223 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~ 1295 (1460)
.|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999632 35699999999999999999999999999999999999999999999999999887654
Q ss_pred H---HhcccEEEeCCCc--cCC-ccHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHH
Q 000497 1296 D---LRGRFAVVPQSPF--LFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQR 1364 (1460)
Q Consensus 1296 ~---lR~~i~iVpQdp~--lf~-gTIR~NLdp~----~~~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQr 1364 (1460)
. +|++++|+||+|. +++ .|+++|+... .....++ ....+.+.++.+|++ ...+.....||||||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~ 156 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESE-----QKARIAELLDMVGLRSEDADKLPRQLSGGQL 156 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHcCCChhhhhCChhhCCHHHH
Confidence 3 6788999999983 443 6999998531 1111111 111233445555775 345667778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChh
Q 000497 1365 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQ 1441 (1460)
Q Consensus 1365 Qrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~ 1441 (1460)
||++||||++++|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 157 qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (265)
T TIGR02769 157 QRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVA 236 (265)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHH
Confidence 999999999999999999999999999999999999987643 7899999999999975 8999999999999999999
Q ss_pred HHhccCC
Q 000497 1442 TLLQDEC 1448 (1460)
Q Consensus 1442 eLl~~~~ 1448 (1460)
++...++
T Consensus 237 ~~~~~~~ 243 (265)
T TIGR02769 237 QLLSFKH 243 (265)
T ss_pred HHcCCCC
Confidence 9987543
No 228
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=367.02 Aligned_cols=218 Identities=26% Similarity=0.415 Sum_probs=185.0
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 3 ~l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 3 LIETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred eEEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 37899999999533 35999999999999999999999999999999999999999999999999998878788899999
Q ss_pred EEeCCC--ccCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1303 VVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1303 iVpQdp--~lf~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
++||+| .+|+.|+++|+.... ..+.++..+ ...+.++.+|+..........||+|||||++|||||+.+|
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p 156 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAH-----RVSSALHMLGLEELRDRVPHHLSGGEKKRVAIAGVIAMEP 156 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998 477889999996422 122222111 1123333345555555566789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
++|||||||++||+.+.+.+.+.+++..+ ++|||++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 157 ~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 157 QVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999987653 789999999999985 5899999999999999999999764
No 229
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-38 Score=377.19 Aligned_cols=222 Identities=27% Similarity=0.426 Sum_probs=189.3
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
..++++|++++|+. .++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++...+. .|+++
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 46999999999963 469999999999999999999999999999999999999999999999999987765 47789
Q ss_pred EEEeCCCccCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
+|++|++.+|+. |++||+.+.. ..+..++.+ .+.+.++.+|++........+||||||||++|||||+++|
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P 168 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRP 168 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999997532 122222221 1234445557766666667789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHHH
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1452 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1452 (1460)
++|+||||||+||..+.+.+.+.|++.. .+.|+|+|||+++.+.. ||||++|++|++++.|+|+++..++...|-
T Consensus 169 ~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~~~~~ 246 (377)
T PRK11607 169 KLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRYS 246 (377)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCccHHH
Confidence 9999999999999999999988776653 37899999999998765 899999999999999999999988776553
No 230
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=365.57 Aligned_cols=222 Identities=28% Similarity=0.400 Sum_probs=187.3
Q ss_pred CCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCC--C
Q 000497 1220 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--T 1292 (1460)
Q Consensus 1220 ~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i 1292 (1460)
..+.++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.|+.. .
T Consensus 22 ~~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 22 EQTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CCcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 3557999999999953 3699999999999999999999999999999999999984 89999999999975 3
Q ss_pred ChHHHhcccEEEeCCCccCCccHHHhcCcCC---C-CC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHH
Q 000497 1293 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---M-ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQR 1364 (1460)
Q Consensus 1293 ~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~---~-~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQr 1364 (1460)
+...+|++++|+||++.+|++|+++|+.+.. . .. ++++.++++.+++.+.+ .+..+..+.+||+|||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~ 174 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEV-----KDRLHENAFGLSGGQQ 174 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhH-----HHHhhCCcccCCHHHH
Confidence 4567899999999999999999999996431 1 11 12234444444433221 1345566778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHH
Q 000497 1365 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1443 (1460)
Q Consensus 1365 Qrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eL 1443 (1460)
||++||||++++|+|+||||||++||.++.+.+.+.|++..+++|+|++||+++.+.. ||||++|++|++++.|+++++
T Consensus 175 qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 254 (272)
T PRK14236 175 QRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTL 254 (272)
T ss_pred HHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHH
Confidence 9999999999999999999999999999999999999987778999999999999865 899999999999999999999
Q ss_pred hccCC
Q 000497 1444 LQDEC 1448 (1460)
Q Consensus 1444 l~~~~ 1448 (1460)
.+++.
T Consensus 255 ~~~~~ 259 (272)
T PRK14236 255 FTSPA 259 (272)
T ss_pred hcCCC
Confidence 87543
No 231
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.2e-39 Score=360.90 Aligned_cols=211 Identities=26% Similarity=0.404 Sum_probs=179.4
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHH-HhcccE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRFA 1302 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i~ 1302 (1460)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ--SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC--eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 578999999964 36999999999999999999999999999999999999999999999999998877654 467899
Q ss_pred EEeCCCccCCc-cHHHhcCcCC-CC--ChHH-HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1303 VVPQSPFLFEG-SLRDNLDPFH-MN--DDLK-IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1303 iVpQdp~lf~g-TIR~NLdp~~-~~--sd~e-i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
|+||++.+|++ |+++|+.... .. .+++ ..++++..+ +++........+||||||||++||||++++|
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~--------~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP--------VLKEMLGRRGGDLSGGQQQQLAIARALVTRP 150 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH--------hHHHHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 9999996431 11 1111 122222221 2444455666789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHh
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
+++||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 151 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 151 KLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999987653 7899999999999986 8999999999999999999983
No 232
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=361.32 Aligned_cols=217 Identities=28% Similarity=0.444 Sum_probs=186.3
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHH-Hhccc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1301 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1301 (1460)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 3889999999963 46999999999999999999999999999999999999999999999999998877644 57889
Q ss_pred EEEeCCCccCCc-cHHHhcCcCCCC----ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFHMN----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~~~----sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
+++||++.+|++ |+++|+...... +.++. +....+.++.+|++.........||+|||||++||||++++
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAAN 155 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHcCCHHHhhcchhhCCHHHHHHHHHHHHHhcC
Confidence 999999998885 999999754211 11111 12234556666887777777789999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
|++|||||||++||+++.+.+.+.+++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 156 PKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999887754 48999999999987755 799999999999999999999764
No 233
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=362.42 Aligned_cols=218 Identities=28% Similarity=0.410 Sum_probs=184.7
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCCC--ChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1295 (1460)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999963 4699999999999999999999999999999999999975 799999999999653 345
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcCCC---C-Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~~~---~-sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
.+|++++|+||++.+|+.|+++|+.+... . +. +++.++++.+++.+.+ ....+.....||+|||||+
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv 156 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEV-----KDDLKKSALKLSGGQQQRL 156 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhh-----hhHhhCCcccCCHHHHHHH
Confidence 67889999999999999999999974321 1 11 2233444444432211 2234556678999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||++++|+|+||||||++||..+.+.+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|+++++..+
T Consensus 157 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 236 (251)
T PRK14270 157 CIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIFLE 236 (251)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999987767999999999999876 899999999999999999999865
Q ss_pred C
Q 000497 1447 E 1447 (1460)
Q Consensus 1447 ~ 1447 (1460)
+
T Consensus 237 ~ 237 (251)
T PRK14270 237 P 237 (251)
T ss_pred C
Confidence 4
No 234
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=360.23 Aligned_cols=217 Identities=24% Similarity=0.410 Sum_probs=182.0
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHH-Hhccc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1301 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1301 (1460)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999963 46999999999999999999999999999999999999999999999999998887654 67889
Q ss_pred EEEeCCCccCCc-cHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
+++||++.+|++ |+++|+..... .+..+..+. +.+.++.+ +++.........||+|||||++||||++++|+
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQER-----IKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPR 157 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHH-----HHHHHHHHHHHHHHHhCchhhCCHHHHHHHHHHHHHHhCCC
Confidence 999999999986 99999965321 122222211 12222223 24333444566899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
|+||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||||++|++|++++.|+++++..+
T Consensus 158 illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 158 LLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 999999999999999999999998764 48999999999997765 799999999999999999999753
No 235
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=368.26 Aligned_cols=219 Identities=28% Similarity=0.482 Sum_probs=184.3
Q ss_pred cEEEEEEEEEecCCC---CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCC----ChH
Q 000497 1223 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~ 1295 (1460)
.|+++|++++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997422 4699999999999999999999999999999999999999999999999998753 245
Q ss_pred HHhcccEEEeCCC--ccCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHH
Q 000497 1296 DLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICL 1369 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp--~lf~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~L 1369 (1460)
..|++++|+||+| .+|+.|+++|+.+.. ..+.++..+ ...+.++.+|++ ........+||+|||||++|
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~l 156 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKVGLSEDLISKSPFELSGGQMRRVAI 156 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCChhHhhCCcccCCHHHHHHHHH
Confidence 6788999999998 577889999996321 122222211 123445555776 34566677999999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1370 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1370 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
||||+++|++|||||||++||+++.+.+.+.|++.. ++.|||++||+++.+. -||+|++|++|++++.|+++++.++
T Consensus 157 aral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13641 157 AGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFSD 235 (287)
T ss_pred HHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998764 4789999999999986 4899999999999999999998764
No 236
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.4e-38 Score=370.94 Aligned_cols=226 Identities=25% Similarity=0.402 Sum_probs=185.0
Q ss_pred cEEEEEEEEEecC--CCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCC---CceEEECCEeCCCCChHHH
Q 000497 1223 LIEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC---GGQILVDGLNIINTPVRDL 1297 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~---~G~I~IDG~di~~i~~~~l 1297 (1460)
.++++|++++|+. +..++++||||+|++||++||+|+||||||||+++|.|+++|. +|+|.+||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 5899999999963 2246999999999999999999999999999999999999996 9999999999999887765
Q ss_pred h----cccEEEeCCC--ccCC-ccHHHhcC----cCCCCChHHHHHHHHHhcHHHHHHhCCCc---hhhhcCCCCCChhH
Q 000497 1298 R----GRFAVVPQSP--FLFE-GSLRDNLD----PFHMNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVGQ 1363 (1460)
Q Consensus 1298 R----~~i~iVpQdp--~lf~-gTIR~NLd----p~~~~sd~ei~~aL~~~~l~~~i~~lgLd---t~v~e~G~~LSgGQ 1363 (1460)
| ++|++||||| .+++ -|+.+|+. .+...+.++..+ ...+.++.+|++ ..++..+..|||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~-----~~~~~L~~vgL~~~~~~~~~~p~~LSgG~ 166 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFE-----ESVRMLDAVKMPEARKRMKMYPHEFSGGM 166 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCCChHHHhcCCcccCCHHH
Confidence 3 4799999999 4555 37777662 222222222111 112223333554 23466777899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcCh
Q 000497 1364 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1440 (1460)
Q Consensus 1364 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1440 (1460)
|||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|.|++
T Consensus 167 ~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~ 246 (330)
T PRK09473 167 RQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNA 246 (330)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999987643 7899999999999975 899999999999999999
Q ss_pred hHHhccCCcHHHH
Q 000497 1441 QTLLQDECSVFSS 1453 (1460)
Q Consensus 1441 ~eLl~~~~~~f~~ 1453 (1460)
+++.+++...|.+
T Consensus 247 ~~i~~~p~~pyt~ 259 (330)
T PRK09473 247 RDVFYQPSHPYSI 259 (330)
T ss_pred HHHHhCCCCHHHH
Confidence 9999877655554
No 237
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=364.59 Aligned_cols=221 Identities=24% Similarity=0.355 Sum_probs=186.1
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCC--CCh
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1294 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1294 (1460)
+.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 46999999999964 4699999999999999999999999999999999999985 48999999999864 445
Q ss_pred HHHhcccEEEeCCCccCCccHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000497 1295 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1366 (1460)
Q Consensus 1295 ~~lR~~i~iVpQdp~lf~gTIR~NLdp~~----~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1366 (1460)
..+|++++++||+|.+|+.|+++|+.+.. ...+ +.+.++++.+++.+.+ ....+..+..||+|||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LS~G~~qr 158 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEV-----KDKLNKSALGLSGGQQQR 158 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-----hhHhcCCcccCCHHHHHH
Confidence 67888999999999999999999996421 1121 2234555555543322 223445666899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe-----CCeEEEEcCh
Q 000497 1367 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD-----HGHLVEQGNP 1440 (1460)
Q Consensus 1367 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~-----~G~IvE~G~p 1440 (1460)
++||||++++|++|||||||++||..+.+.+.+.|++..+++|||+|||+++.+.+ ||++++|+ +|++++.|++
T Consensus 159 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 159 LCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFGVT 238 (259)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeCCH
Confidence 99999999999999999999999999999999999987677999999999999876 79999997 5999999999
Q ss_pred hHHhccCCc
Q 000497 1441 QTLLQDECS 1449 (1460)
Q Consensus 1441 ~eLl~~~~~ 1449 (1460)
+++.+++..
T Consensus 239 ~~~~~~~~~ 247 (259)
T PRK14260 239 TQIFSNPLD 247 (259)
T ss_pred HHHhcCCCC
Confidence 999876543
No 238
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.1e-38 Score=359.16 Aligned_cols=211 Identities=26% Similarity=0.415 Sum_probs=176.0
Q ss_pred EEEEEEEEEecCCC--CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh---HHHh
Q 000497 1224 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLR 1298 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR 1298 (1460)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 369999999999999999999999999999999999999999999999999988773 5778
Q ss_pred cccEEEeCCC--ccC-CccHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHH
Q 000497 1299 GRFAVVPQSP--FLF-EGSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLA 1370 (1460)
Q Consensus 1299 ~~i~iVpQdp--~lf-~gTIR~NLdp~----~~~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LA 1370 (1460)
++++|+||+| .++ ..|+++|+... ....+++.. +.+ ..+.++.+|++ ...+....+||+|||||++||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~---~~~-~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~la 157 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEAR---KEA-VLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIA 157 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHH---HHH-HHHHHHHCCCChhHhhCCchhcCHHHHHHHHHH
Confidence 8999999999 344 46999998532 111111111 110 12344555774 456777789999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHh-hcCEEEEEeCCeEEEEc
Q 000497 1371 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1371 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G 1438 (1460)
||++++|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+. .||+|++|++|++++.|
T Consensus 158 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 158 RALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999988754 789999999999988 48999999999998765
No 239
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=362.75 Aligned_cols=226 Identities=25% Similarity=0.389 Sum_probs=188.6
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCCC--ChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1295 (1460)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 5899999999963 4699999999999999999999999999999999999763 489999999999876 456
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcCCCC----C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMN----D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~~~~----s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
..|++++|+||+|.+|++|+++|+.+.... . ++++.++++.+++.+. +.+..+..+.+||+|||||+
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qrv 158 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDE-----VKDRLHDSALSLSGGQQQRL 158 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchh-----hHHHhhcChhhCCHHHHHHH
Confidence 778899999999999999999999753211 1 1123334444333221 23345667778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||++.+|+++||||||++||.++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 159 ~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 238 (253)
T PRK14261 159 CIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIFEN 238 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHHhC
Confidence 9999999999999999999999999999999999987777999999999999975 899999999999999999999876
Q ss_pred CCcHHHHHH
Q 000497 1447 ECSVFSSFV 1455 (1460)
Q Consensus 1447 ~~~~f~~l~ 1455 (1460)
+...+.+.+
T Consensus 239 ~~~~~~~~~ 247 (253)
T PRK14261 239 PHEELTENY 247 (253)
T ss_pred CCcHHHHHH
Confidence 544444433
No 240
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=362.25 Aligned_cols=222 Identities=23% Similarity=0.391 Sum_probs=188.1
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-----CCCceEEECCEeCCC--CChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1295 (1460)
.++++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+.+ |++|+|.+||.+++. .+..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 3789999999963 469999999999999999999999999999999999875 389999999999875 3466
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcCC---CCCh-----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDD-----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~~---~~sd-----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
.+|++++|+||+|.+|++|+++|+.... ...+ +++.++++.+++.+.+. ...+..+.+||+|||||+
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-----~~~~~~~~~LS~Gq~qrv 155 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-----DKLDKSALGLSGGQQQRL 155 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-----HHHhCCcccCCHHHHHHH
Confidence 7899999999999999999999996431 1111 23444555555544332 223556678999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||++++|+||+|||||++||..+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 156 ~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~~~ 235 (250)
T PRK14266 156 CIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIFIN 235 (250)
T ss_pred HHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999987778999999999998876 699999999999999999999877
Q ss_pred CCcHH
Q 000497 1447 ECSVF 1451 (1460)
Q Consensus 1447 ~~~~f 1451 (1460)
+.+.+
T Consensus 236 ~~~~~ 240 (250)
T PRK14266 236 PKDKR 240 (250)
T ss_pred CCChH
Confidence 65544
No 241
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=9.9e-39 Score=353.15 Aligned_cols=198 Identities=27% Similarity=0.414 Sum_probs=168.5
Q ss_pred EEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000497 1225 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1304 (1460)
Q Consensus 1225 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iV 1304 (1460)
+++|++++|+.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999642 469999999999999999999999999999999999999999999999999864 4567889999
Q ss_pred eCCC--ccCCccHHHhcCcCCC-C--ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1305 PQSP--FLFEGSLRDNLDPFHM-N--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1305 pQdp--~lf~gTIR~NLdp~~~-~--sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
||+| .+|+.|++||+..+.. . .++++.++++.+ |++.........||+|||||++||||++++|++
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 147 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDL---------DLYALKERHPLSLSGGQKQRLAIAAALLSGKDL 147 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHc---------CCchhcCCCchhCCHHHHHHHHHHHHHHhCCCE
Confidence 9998 4678899999975422 1 123444444444 444444455568999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhHhh-cCEEEEEeCCeEE
Q 000497 1380 LCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLN-MDEILILDHGHLV 1435 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~-~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~Iv 1435 (1460)
|+|||||++||+++.+.+.+.|++. .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 148 LIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999876 357899999999999875 8999999999975
No 242
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=361.80 Aligned_cols=220 Identities=27% Similarity=0.383 Sum_probs=185.9
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCC-----CceEEECCEeCCCC--Ch
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIINT--PV 1294 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~i--~~ 1294 (1460)
+.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +.
T Consensus 3 ~~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 3 PKIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred ceEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 36899999999963 46999999999999999999999999999999999999987 69999999998653 45
Q ss_pred HHHhcccEEEeCCCccCCccHHHhcCcCCC----CCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000497 1295 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1366 (1460)
Q Consensus 1295 ~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~----~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1366 (1460)
..+|++++|+||+|.+|+.|+++|+.+... ... +.+.++++..++++.+ ....+..+.+||+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LS~Gq~qr 155 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEV-----KDNLHKSGLALSGGQQQR 155 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhh-----hhHhhCCcccCCHHHHHH
Confidence 678899999999999999999999975321 111 2233334444443322 233556777899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1367 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1367 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
++||||++++|++|||||||++||.++.+.+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 235 (251)
T PRK14249 156 LCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIFS 235 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999887668999999999999887 69999999999999999999976
Q ss_pred cCC
Q 000497 1446 DEC 1448 (1460)
Q Consensus 1446 ~~~ 1448 (1460)
++.
T Consensus 236 ~~~ 238 (251)
T PRK14249 236 RPR 238 (251)
T ss_pred CCC
Confidence 543
No 243
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.5e-38 Score=371.98 Aligned_cols=216 Identities=28% Similarity=0.397 Sum_probs=183.3
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999964 4699999999999999999999999999999999999999999999999998754 356789999
Q ss_pred EEeCCCccCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1303 VVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1303 iVpQdp~lf~-gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
|+||++.+++ .|+++|+..+. ..++.+..+. +.+.++.+|++........+||||||||++|||||+++|+
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~ 155 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFARLESKADVRVALLSGGMKRRLTLARALINDPQ 155 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999886 59999996321 1222222221 1223334466555555666899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+|||||||++||+++.+.+.+.|++.. +++|||++||+++.+.+ ||||++|++|++++.|+++++.++
T Consensus 156 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 156 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999998764 47899999999999875 899999999999999999999754
No 244
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-38 Score=366.32 Aligned_cols=219 Identities=26% Similarity=0.439 Sum_probs=184.8
Q ss_pred cEEEEEEEEEecCC----CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCC-hHHH
Q 000497 1223 LIEFQNVTMRYKPS----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDL 1297 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~----~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~~l 1297 (1460)
.++++|++++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 58999999999642 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hcccEEEeCCCc--cCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000497 1298 RGRFAVVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1372 (1460)
Q Consensus 1298 R~~i~iVpQdp~--lf~gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1372 (1460)
|++++++||+|. +|..|+++|+.+... .+..+..+ .+.+.++.+|++........+||+|||||++||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~lara 158 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRE-----RVDESLKKVGMYEYRRHAPHLLSGGQKQRVAIAGI 158 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHH-----HHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHH
Confidence 899999999984 676799999965321 12222111 12233334456555566667899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1373 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1373 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
++++|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+..||||++|++|++++.|+++++..+
T Consensus 159 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 159 LAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999998764 38999999999999988999999999999999999999764
No 245
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-38 Score=371.05 Aligned_cols=226 Identities=19% Similarity=0.318 Sum_probs=182.5
Q ss_pred cEEEEEEEEEecCCC--CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC----CCCceEEECCEeCCCCChHH
Q 000497 1223 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP----ICGGQILVDGLNIINTPVRD 1296 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~----~~~G~I~IDG~di~~i~~~~ 1296 (1460)
.++++|++++|+... ..+|+||||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 379999999996532 359999999999999999999999999999999999997 48999999999999988776
Q ss_pred Hhc----ccEEEeCCCc--cCCc-cHHHhc----CcCCCCChHHHHHHHHHhcHHHHHHhCCCc---hhhhcCCCCCChh
Q 000497 1297 LRG----RFAVVPQSPF--LFEG-SLRDNL----DPFHMNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVG 1362 (1460)
Q Consensus 1297 lR~----~i~iVpQdp~--lf~g-TIR~NL----dp~~~~sd~ei~~aL~~~~l~~~i~~lgLd---t~v~e~G~~LSgG 1362 (1460)
+|+ ++++|||+|. +.+. |+.+|+ ........++.. ....+.++.+||+ ...+....+||||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~-----~~~~~~L~~~gL~~~~~~l~~~p~~LSgG 157 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRR-----QRAIDLLNQVGIPDPASRLDVYPHQLSGG 157 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHCCCCChHHHHhCCchhCCHH
Confidence 543 6999999995 4432 565554 322111211111 1122333444554 2356667789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcC
Q 000497 1363 QRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGN 1439 (1460)
Q Consensus 1363 QrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~ 1439 (1460)
||||++|||||+.+|++||+||||++||..+...+.+.|++.. .+.|+|+|||+++.+. .||||+||++|+|+|.|+
T Consensus 158 q~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~ 237 (326)
T PRK11022 158 MSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGK 237 (326)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999999999998764 3789999999999985 589999999999999999
Q ss_pred hhHHhccCCcHHHH
Q 000497 1440 PQTLLQDECSVFSS 1453 (1460)
Q Consensus 1440 p~eLl~~~~~~f~~ 1453 (1460)
++++++++...|.+
T Consensus 238 ~~~~~~~p~hpyt~ 251 (326)
T PRK11022 238 AHDIFRAPRHPYTQ 251 (326)
T ss_pred HHHHhhCCCChHHH
Confidence 99999877655544
No 246
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.8e-38 Score=370.56 Aligned_cols=215 Identities=27% Similarity=0.386 Sum_probs=187.6
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|++ ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.. +...+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999963 469999999999999999999999999999999999999999999999999977 44678899999
Q ss_pred EeCCCccCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1304 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+||+|.+|++ |++||+.++.. ...++..+ ...+.++.+|++...+....+||+|||||++|||||+++|++
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 154 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKV 154 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHCCCchHhcCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999987 99999964321 12222111 123445555777777777789999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1380 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
|+|||||++||+++.+.+++.|++..+++|||++||+++.+.+ ||||++|++|++++.|+++++.++
T Consensus 155 liLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 155 LILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999987778999999999999876 899999999999999999999764
No 247
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-38 Score=364.05 Aligned_cols=223 Identities=23% Similarity=0.341 Sum_probs=190.0
Q ss_pred CCCCccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCC--
Q 000497 1218 WPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII-- 1290 (1460)
Q Consensus 1218 wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~-- 1290 (1460)
-|.++.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 11 ~~~~~~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~ 88 (265)
T PRK14252 11 SPTQQKSEVNKLNFYYGG--YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNIL 88 (265)
T ss_pred cCCCceEEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccc
Confidence 456788999999999964 3699999999999999999999999999999999999975 7999999998874
Q ss_pred --CCChHHHhcccEEEeCCCccCCccHHHhcCcCC---CC-----ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCC
Q 000497 1291 --NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFS 1360 (1460)
Q Consensus 1291 --~i~~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~---~~-----sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LS 1360 (1460)
......+|++++|+||+|.+|.+|+++|+.... .. .++++.++++.+++.+ ++....+....+||
T Consensus 89 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~l~~~~~~~~~~LS 163 (265)
T PRK14252 89 SPEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-----EVKDRLGDLAFNLS 163 (265)
T ss_pred ccccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-----hhhHHHhCCcccCC
Confidence 334567889999999999999999999996431 11 1244555666555432 22344566677899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcC
Q 000497 1361 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1439 (1460)
Q Consensus 1361 gGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~ 1439 (1460)
+|||||++||||++++|+++||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999987667899999999999975 89999999999999999
Q ss_pred hhHHhccC
Q 000497 1440 PQTLLQDE 1447 (1460)
Q Consensus 1440 p~eLl~~~ 1447 (1460)
++++..++
T Consensus 244 ~~~~~~~~ 251 (265)
T PRK14252 244 TDTIFIKP 251 (265)
T ss_pred HHHHHhCC
Confidence 99997654
No 248
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.8e-38 Score=373.92 Aligned_cols=216 Identities=28% Similarity=0.425 Sum_probs=184.1
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++|++++|+. ..+|+||||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+ ...|++++
T Consensus 41 ~i~i~nl~k~y~~--~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGD--KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 5999999999964 36999999999999999999999999999999999999999999999999997654 56789999
Q ss_pred EEeCCCccCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1303 VVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1303 iVpQdp~lf~-gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
|+||++.++. .|+++|+..+.. .+..+..+. ..+.++.+|++........+||+|||||++|||||+.+|+
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~ 192 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFARLESKADARVSDLSGGMKRRLTLARALINDPQ 192 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999875 599999975321 122222211 1233343466655555566899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||||++|++|++++.|+++++.++
T Consensus 193 lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 193 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999998764 48999999999999975 899999999999999999999764
No 249
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.5e-39 Score=357.31 Aligned_cols=207 Identities=30% Similarity=0.381 Sum_probs=173.4
Q ss_pred EEEEEEEEEecCCC--CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1224 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999996421 469999999999999999999999999999999999999999999999999863 46789
Q ss_pred EEEeCCCccCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1302 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1302 ~iVpQdp~lf~-gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
+|+||+|.+|+ .|+++|+..... ....+. ...+.+.++.+|++........+||||||||++||||++++|
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p 150 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEA-----RERAEELLELVGLSGFENAYPHQLSGGMRQRVALARALAVDP 150 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999987 699999864211 111111 111233444556666566666789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEe--CCeEEEEcCh
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILD--HGHLVEQGNP 1440 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~--~G~IvE~G~p 1440 (1460)
+++||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|+ +|+++|.++.
T Consensus 151 ~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 151 DVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999998763 37899999999998765 89999999 7999998764
No 250
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-38 Score=365.21 Aligned_cols=220 Identities=26% Similarity=0.419 Sum_probs=184.4
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-----CCCceEEECCEeCCCC--Ch
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--PV 1294 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~i--~~ 1294 (1460)
..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++... +.
T Consensus 38 ~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 46999999999964 469999999999999999999999999999999999997 6899999999998653 45
Q ss_pred HHHhcccEEEeCCCccCCccHHHhcCcCC---CCC---hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000497 1295 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1368 (1460)
Q Consensus 1295 ~~lR~~i~iVpQdp~lf~gTIR~NLdp~~---~~s---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1368 (1460)
..+|++++|+||++.+|++|+++|+.... ... +++++++++..++.+.+ ....+....+||||||||++
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-----~~~~~~~~~~LSgGe~qrv~ 190 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEV-----KDQLDSSGLDLSGGQQQRLC 190 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchh-----HHHHhCCcccCCHHHHHHHH
Confidence 67889999999999999999999996421 111 22344444444332111 12345667789999999999
Q ss_pred HHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEE-EEeCCeEEEEcChhHHhcc
Q 000497 1369 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEIL-ILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1369 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIl-Vl~~G~IvE~G~p~eLl~~ 1446 (1460)
|||||+++|+||||||||++||.++.+.+.+.|++..+++|+|++||+++.+.. |||++ +|++|+|++.|+++++.++
T Consensus 191 LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~~~ 270 (285)
T PRK14254 191 IARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIFEN 270 (285)
T ss_pred HHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999988777899999999999876 89975 5799999999999999875
Q ss_pred CC
Q 000497 1447 EC 1448 (1460)
Q Consensus 1447 ~~ 1448 (1460)
+.
T Consensus 271 ~~ 272 (285)
T PRK14254 271 PE 272 (285)
T ss_pred cC
Confidence 43
No 251
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-38 Score=362.54 Aligned_cols=219 Identities=24% Similarity=0.366 Sum_probs=186.2
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-----CCCceEEECCEeCCC--CChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1295 (1460)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGS--FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECC--EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 5999999999964 369999999999999999999999999999999999986 479999999999853 4566
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcCCC---CC---hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1369 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~~~---~s---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1369 (1460)
.+|++++++||+|.+|+.|+++|+.+... .. ++++.++++.+++.+.+. ...+..+.+||||||||++|
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-----~~~~~~~~~LSgGq~qrv~l 162 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-----DKLKQSGLSLSGGQQQRLCI 162 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-----HHhcCCcccCCHHHHHHHHH
Confidence 78899999999999998999999965321 11 233444555555544332 23455667899999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe---------CCeEEEEcC
Q 000497 1370 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD---------HGHLVEQGN 1439 (1460)
Q Consensus 1370 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~---------~G~IvE~G~ 1439 (1460)
|||++++|+||||||||++||+++.+.+.+.|++..+++|||++||+++.+.. ||||++|+ +|++++.|+
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~ 242 (264)
T PRK14243 163 ARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEFDR 242 (264)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEeCC
Confidence 99999999999999999999999999999999987777899999999998865 79999998 899999999
Q ss_pred hhHHhccCC
Q 000497 1440 PQTLLQDEC 1448 (1460)
Q Consensus 1440 p~eLl~~~~ 1448 (1460)
++++.+++.
T Consensus 243 ~~~~~~~~~ 251 (264)
T PRK14243 243 TEKIFNSPQ 251 (264)
T ss_pred HHHHHhCCC
Confidence 999987654
No 252
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.3e-38 Score=354.47 Aligned_cols=206 Identities=27% Similarity=0.414 Sum_probs=174.4
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ++++++
T Consensus 1 i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN--VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECC--eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 578999999964 3699999999999999999999999999999999999999999999999999766543 568999
Q ss_pred EeCCCccCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1304 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1304 VpQdp~lf~-gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+||++.+|. .|+++|+.... ....++..+ .+.+.++.+|++........+||+|||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 151 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKV 151 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999886 59999996531 112222111 122334445666666667778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEc
Q 000497 1380 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1438 (1460)
++|||||++||+++.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|++|++++.|
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 152 FLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999998764 37999999999999876 8999999999999876
No 253
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=377.34 Aligned_cols=208 Identities=27% Similarity=0.400 Sum_probs=176.6
Q ss_pred ccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH----hcccEEEeCCCccCCc-
Q 000497 1239 AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGRFAVVPQSPFLFEG- 1313 (1460)
Q Consensus 1239 ~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~i~iVpQdp~lf~g- 1313 (1460)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.|+...+...+ |++++|+||++.+|+.
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999998876654 4689999999999975
Q ss_pred cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCC
Q 000497 1314 SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVD 1390 (1460)
Q Consensus 1314 TIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD 1390 (1460)
|+++|+.+.. ..+.++..+ ...+.++.+|++........+||||||||++|||||+.+|+||||||||++||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD 196 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERRE-----KALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALD 196 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCC
Confidence 9999996432 112222111 12334444577666666777899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHH
Q 000497 1391 AQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1451 (1460)
Q Consensus 1391 ~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1451 (1460)
+.+.+.+++.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+|++++.++...|
T Consensus 197 ~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 197 PLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred HHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999998764 48999999999999865 89999999999999999999988764433
No 254
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=9.7e-39 Score=354.15 Aligned_cols=202 Identities=27% Similarity=0.407 Sum_probs=173.8
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++... ..+|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 578999999953 4699999999999999999999999999999999999999999999999998764 567889999
Q ss_pred EeCCCccCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1304 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1304 VpQdp~lf~-gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+||++.+|+ .|+++|+..+. ..+++++.++++..++ +.........||+|||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l---------~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 147 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGL---------KDSAKKKVKGFSLGMKQRLGIALALLGNPDL 147 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCC---------HHHHhhhHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998875 69999996532 1234445555555544 4444455567999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEc
Q 000497 1380 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1438 (1460)
++|||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 148 LILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999998754 47999999999999875 8999999999999865
No 255
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3.4e-38 Score=356.54 Aligned_cols=215 Identities=28% Similarity=0.410 Sum_probs=182.6
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++|
T Consensus 1 i~i~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGS--FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECC--eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 578999999964 369999999999999999999999999999999999999999999999999987653 4788999
Q ss_pred EeCCCccCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1304 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+||+|.+|++ |+++|+..... .+..+. ...+.+.++.+|+.........+||+||+||++||||++++|++
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~l 151 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKI-----KARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARALAVEPQV 151 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHH-----HHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999986 99999964321 111111 11223445555665555556678999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1380 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
++|||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|+++|.|+++++.+.+
T Consensus 152 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~~ 222 (237)
T TIGR00968 152 LLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDHP 222 (237)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcCC
Confidence 999999999999999999999987643 7999999999999866 8999999999999999999998654
No 256
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=359.56 Aligned_cols=219 Identities=28% Similarity=0.419 Sum_probs=186.2
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCCCC-hHH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTP-VRD 1296 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i~-~~~ 1296 (1460)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 6899999999963 4699999999999999999999999999999999999986 6999999999997663 456
Q ss_pred HhcccEEEeCCCccCCccHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCc----hhhhcCCCCCChhHHHHHH
Q 000497 1297 LRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQLIC 1368 (1460)
Q Consensus 1297 lR~~i~iVpQdp~lf~gTIR~NLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLd----t~v~e~G~~LSgGQrQrl~ 1368 (1460)
+|++++|+||+|.+|+.|+++|+.... ..+++++.+. ..+.++.+|++ +.+.....+||+|||||++
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~ 173 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGV-----AQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLC 173 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHH
Confidence 789999999999999999999996431 1233333221 12233333443 3456677789999999999
Q ss_pred HHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1369 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1369 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
||||++++|++|||||||++||..+.+.+.+.|++..+++|||+|||+++.+.+ ||||++|++|++++.|+++++.+++
T Consensus 174 LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 253 (276)
T PRK14271 174 LARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSP 253 (276)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999999887667899999999999876 8999999999999999999998765
Q ss_pred C
Q 000497 1448 C 1448 (1460)
Q Consensus 1448 ~ 1448 (1460)
.
T Consensus 254 ~ 254 (276)
T PRK14271 254 K 254 (276)
T ss_pred C
Confidence 3
No 257
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1e-38 Score=352.03 Aligned_cols=201 Identities=25% Similarity=0.379 Sum_probs=171.4
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|.+|+|.. +++|+|+||++++|++++|+||||||||||||+|+|.++|.+|+|.++|
T Consensus 2 ~L~~~~ls~~y~~------~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelA 75 (258)
T COG1120 2 MLEVENLSFGYGG------KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELA 75 (258)
T ss_pred eeEEEEEEEEECC------eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHh
Confidence 3678999999973 3459999999999999999999999999999999999999999999998
Q ss_pred -cEEEEcCCCCCCC-ccHHHHHccCCC-C----------ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000497 674 -SIAYVPQVPWILS-GTIRDNILFGKN-Y----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 740 (1460)
Q Consensus 674 -~i~y~~Q~p~l~~-~ti~~nI~~g~~-~----------~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQk 740 (1460)
.+||+||++.... -||+|-+.+|+- + |++...++++.+++++-. ...-..||||||
T Consensus 76 k~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-----------~r~~~~LSGGer 144 (258)
T COG1120 76 KKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-----------DRPVDELSGGER 144 (258)
T ss_pred hhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-----------cCcccccChhHH
Confidence 6999999986654 499999999852 1 334566668888776532 233458999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchh-hcCCEEEEEeCCeEEEecCHH
Q 000497 741 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI-SAADMVVVMDKGQVKWIGSSA 819 (1460)
Q Consensus 741 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l-~~ad~i~~l~~G~i~~~g~~~ 819 (1460)
|||.|||||+++|+|++||||||+||....-.+++.+..-...+|+|+|+|+|+++.. .+||++++|++|++..+|+++
T Consensus 145 Qrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~ 224 (258)
T COG1120 145 QRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPE 224 (258)
T ss_pred HHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcc
Confidence 9999999999999999999999999999999999874332234578999999999874 579999999999999999998
Q ss_pred HHHh
Q 000497 820 DLAV 823 (1460)
Q Consensus 820 ~l~~ 823 (1460)
|++.
T Consensus 225 evlT 228 (258)
T COG1120 225 EVLT 228 (258)
T ss_pred hhcC
Confidence 8764
No 258
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=6.6e-38 Score=359.00 Aligned_cols=225 Identities=23% Similarity=0.386 Sum_probs=187.7
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEe-----CCCCChHH-
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN-----IINTPVRD- 1296 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~d-----i~~i~~~~- 1296 (1460)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5899999999964 469999999999999999999999999999999999999999999999999 87776654
Q ss_pred ---HhcccEEEeCCCc--cCC-ccHHHhcCc----CCCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHH
Q 000497 1297 ---LRGRFAVVPQSPF--LFE-GSLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQ 1365 (1460)
Q Consensus 1297 ---lR~~i~iVpQdp~--lf~-gTIR~NLdp----~~~~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQ 1365 (1460)
.|+.++|+||+|. ++. .|+++|+.. +......++.+ ...+.++.+|++ +..+..+.+|||||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~LS~Gq~q 158 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERVEIDAARIDDLPTTFSGGMQQ 158 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHcCCChhHHhCCCccCCHHHHH
Confidence 3567999999984 343 478888742 11111112211 234556666886 4677888899999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhH
Q 000497 1366 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1442 (1460)
Q Consensus 1366 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~e 1442 (1460)
|++||||++++|+||||||||++||+++.+.+.+.|++..+ +.|+|+|||+++.+.+ ||+|++|++|++++.|++++
T Consensus 159 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 238 (258)
T PRK11701 159 RLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLTDQ 238 (258)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999987643 7899999999999975 89999999999999999999
Q ss_pred HhccCCcHHHHH
Q 000497 1443 LLQDECSVFSSF 1454 (1460)
Q Consensus 1443 Ll~~~~~~f~~l 1454 (1460)
+..++...|.+.
T Consensus 239 ~~~~~~~~~~~~ 250 (258)
T PRK11701 239 VLDDPQHPYTQL 250 (258)
T ss_pred HhcCCCCHHHHH
Confidence 987665445443
No 259
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.4e-38 Score=354.58 Aligned_cols=205 Identities=31% Similarity=0.391 Sum_probs=171.5
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh---HHHhcc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1300 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1300 (1460)
++++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 469999999999999999999999999999999999999999999999999987754 357889
Q ss_pred cEEEeCCCccCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1301 FAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1301 i~iVpQdp~lf~g-TIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
++++||+|.+|++ |+++|+.... ..+.++..+ .+.+.++.+|++........+||+|||||++||||++++
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 154 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRK-----RVPAALELVGLSHKHRALPAELSGGEQQRVAIARAIVNS 154 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHHcC
Confidence 9999999999985 9999996431 112111111 122333444555555555668999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeE
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1434 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~I 1434 (1460)
|+|+||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 155 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 155 PTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999998763 58999999999999986 799999999974
No 260
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-38 Score=361.88 Aligned_cols=216 Identities=25% Similarity=0.403 Sum_probs=184.6
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999963 469999999999999999999999999999999999999999999999999988888888889999
Q ss_pred EeCCCccCCc-cHHHhcCcCCC-----CC--hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1304 VPQSPFLFEG-SLRDNLDPFHM-----ND--DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~~~-----~s--d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
+||++.++.+ |+++|+++... .. +.+. ...+.+.++.+|++.........||||||||++||||+++
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~ 155 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAED-----NARVNQAMEQTRINHLADRRLTDLSGGQRQRAFLAMVLAQ 155 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHH-----HHHHHHHHHHcCCHHHHcCCcccCCHHHHHHHHHHHHHhc
Confidence 9999998877 99999975311 00 1110 1112233333466555566677899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+|++|||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 156 ~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 228 (255)
T PRK11231 156 DTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP 228 (255)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH
Confidence 999999999999999999999999998764 47999999999999875 899999999999999999998753
No 261
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-38 Score=363.56 Aligned_cols=217 Identities=26% Similarity=0.433 Sum_probs=182.1
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCC--CChHHHhccc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRF 1301 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~--i~~~~lR~~i 1301 (1460)
|+++|++++|+. ..++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 2 l~~~~l~~~~~~-~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPD-GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 789999999963 2469999999999999999999999999999999999999999999999999853 3345678999
Q ss_pred EEEeCCC--ccCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1302 AVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1302 ~iVpQdp--~lf~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
+|+||+| .+|+.|+++|+.... ..+.++..+ ...+.++.+|++.........||+|||||++||||++++
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LS~Gq~qrv~laral~~~ 155 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEK-----RVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMK 155 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHCCCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998 478899999996321 122222211 122334444555445555668999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
|+++||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||||++|++|++++.|+++++++.
T Consensus 156 p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 156 PEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999998764 47899999999999875 899999999999999999998764
No 262
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-38 Score=363.55 Aligned_cols=213 Identities=27% Similarity=0.402 Sum_probs=183.6
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999963 36999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEeCCCccCCc-cHHHhcCcCCC--------C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000497 1303 VVPQSPFLFEG-SLRDNLDPFHM--------N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1370 (1460)
Q Consensus 1303 iVpQdp~lf~g-TIR~NLdp~~~--------~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1370 (1460)
|+||++.++.+ |+++|+..... . .++++.++++.+ |++........+||||||||++||
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LSgG~~qrv~la 159 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLV---------GLKPLAHRLVDSLSGGERQRAWIA 159 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc---------CCHHHhcCCcccCCHHHHHHHHHH
Confidence 99999877665 99999964311 0 112334444444 454444455568999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1371 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1371 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
||++.+|+||||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 160 ral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~~ 238 (265)
T PRK10575 160 MLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMRG 238 (265)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcCH
Confidence 99999999999999999999999999999998764 37999999999999865 899999999999999999998753
No 263
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-38 Score=363.78 Aligned_cols=217 Identities=24% Similarity=0.352 Sum_probs=181.1
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCC--CCChHHHhccc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII--NTPVRDLRGRF 1301 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~--~i~~~~lR~~i 1301 (1460)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 789999999963 46999999999999999999999999999999999999999999999999985 34456778899
Q ss_pred EEEeCCCc--cCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1302 AVVPQSPF--LFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1302 ~iVpQdp~--lf~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
+|+||+|. ++..|+.+|+.... ..++++..+ .+.+.++.+|++........+||||||||++|||||+.+
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~laraL~~~ 154 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITR-----RVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQ 154 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHhHhcCCchhCCHHHHHHHHHHHHHHcC
Confidence 99999985 57789999986421 112222211 122233333554444555678999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++..+.
T Consensus 155 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (271)
T PRK13638 155 ARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFACT 227 (271)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCh
Confidence 99999999999999999999999998764 47899999999999865 8999999999999999999987643
No 264
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=2.6e-38 Score=339.73 Aligned_cols=172 Identities=35% Similarity=0.591 Sum_probs=162.4
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++|++++|+....++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.+.+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999999998899999999
Q ss_pred EeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000497 1304 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1383 (1460)
Q Consensus 1304 VpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1383 (1460)
++|+|.+|++|+++|+ ||+|||||++||||++++|+++|||
T Consensus 81 ~~q~~~~~~~tv~~~l---------------------------------------LS~G~~qrv~la~al~~~p~~lllD 121 (173)
T cd03246 81 LPQDDELFSGSIAENI---------------------------------------LSGGQRQRLGLARALYGNPRILVLD 121 (173)
T ss_pred ECCCCccccCcHHHHC---------------------------------------cCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999998 9999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCeE
Q 000497 1384 ECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHL 1434 (1460)
Q Consensus 1384 EaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl~~G~I 1434 (1460)
|||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++
T Consensus 122 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 122 EPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred CCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 9999999999999999998764 48899999999999988999999999975
No 265
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-38 Score=360.36 Aligned_cols=220 Identities=23% Similarity=0.365 Sum_probs=186.8
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hccc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1301 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1301 (1460)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5999999999963 469999999999999999999999999999999999999999999999999988876554 4569
Q ss_pred EEEeCCCccCCc-cHHHhcCcCCC-CC--------------hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFHM-ND--------------DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1365 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~~-~s--------------d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1365 (1460)
+++||+|.+|++ |+++|+..... .. +.+..+. .....+.++.+|++...+....+||+||||
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gl~~~~~~~~~~LS~G~~q 160 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEA--LDRAATWLERVGLLEHANRQAGNLAYGQQR 160 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHH--HHHHHHHHHhCChhhhhhCChhhCCHHHHH
Confidence 999999999986 99999975311 00 0000011 112334555568877778888899999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhH
Q 000497 1366 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1442 (1460)
Q Consensus 1366 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~e 1442 (1460)
|++||||++++|++|||||||++||.++.+.+.+.|++..+ ++|||++||+++.+.+ ||+|++|++|++++.|++++
T Consensus 161 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 240 (255)
T PRK11300 161 RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEE 240 (255)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHH
Confidence 99999999999999999999999999999999999987643 7899999999999866 89999999999999999999
Q ss_pred Hhcc
Q 000497 1443 LLQD 1446 (1460)
Q Consensus 1443 Ll~~ 1446 (1460)
+..+
T Consensus 241 ~~~~ 244 (255)
T PRK11300 241 IRNN 244 (255)
T ss_pred HhhC
Confidence 8754
No 266
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.6e-38 Score=373.54 Aligned_cols=208 Identities=25% Similarity=0.388 Sum_probs=174.5
Q ss_pred ccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCE----eCCCCChHHH---h-cccEEEeCCCcc
Q 000497 1239 AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL----NIINTPVRDL---R-GRFAVVPQSPFL 1310 (1460)
Q Consensus 1239 ~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~----di~~i~~~~l---R-~~i~iVpQdp~l 1310 (1460)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||. |+...+...+ | ++++||||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 5799999999999999999999999999999999999999999999996 6777765554 3 589999999999
Q ss_pred CC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccc
Q 000497 1311 FE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1386 (1460)
Q Consensus 1311 f~-gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaT 1386 (1460)
|+ .|+++|+.+.. ..++++. +....+.++.+||+........+||||||||++|||||+++|+||||||||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~-----~~~a~e~le~vgL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPt 192 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAER-----RKRVDEQLELVGLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPF 192 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 98 69999996432 1122221 112233444456665556666789999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHH
Q 000497 1387 ANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1451 (1460)
Q Consensus 1387 S~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1451 (1460)
|+||+.+.+.+++.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|++++.++...|
T Consensus 193 s~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~ 260 (382)
T TIGR03415 193 SALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDY 260 (382)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHH
Confidence 99999999999999987643 7999999999999754 89999999999999999999987764433
No 267
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-38 Score=360.80 Aligned_cols=219 Identities=24% Similarity=0.417 Sum_probs=182.5
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCC--CChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~~ 1295 (1460)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGS--FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECC--EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 4899999999964 3699999999999999999999999999999999999974 69999999999854 4456
Q ss_pred HHhcccEEEeCCCccCCc-cHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1366 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~g-TIR~NLdp~~----~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1366 (1460)
.+|+.++++||++.+|+. |+++|+.... ..+. +++.++++.+++.+.+ +........+||+|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qr 156 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEV-----KDRLDKPGGGLSGGQQQR 156 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hhHhhCCcccCCHHHHHH
Confidence 788999999999999874 9999986321 1111 2233334444332211 234556667899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe------CCeEEEEcC
Q 000497 1367 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD------HGHLVEQGN 1439 (1460)
Q Consensus 1367 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~------~G~IvE~G~ 1439 (1460)
++||||++++|+++||||||++||..+.+.+.+.|++..+++|||+|||+++.+.. ||||++|+ +|+|++.|+
T Consensus 157 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~~ 236 (258)
T PRK14241 157 LCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEIDD 236 (258)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecCC
Confidence 99999999999999999999999999999999999887667999999999999865 89999996 899999999
Q ss_pred hhHHhccCC
Q 000497 1440 PQTLLQDEC 1448 (1460)
Q Consensus 1440 p~eLl~~~~ 1448 (1460)
+++++.++.
T Consensus 237 ~~~~~~~~~ 245 (258)
T PRK14241 237 TEKIFSNPT 245 (258)
T ss_pred HHHHHhCcC
Confidence 999987543
No 268
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-38 Score=359.01 Aligned_cols=219 Identities=25% Similarity=0.377 Sum_probs=184.9
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCC-CCChHH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII-NTPVRD 1296 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~-~i~~~~ 1296 (1460)
.++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4899999999963 4699999999999999999999999999999999999986 5999999999986 456677
Q ss_pred HhcccEEEeCCCccCCccHHHhcCcCC---CCC-h----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000497 1297 LRGRFAVVPQSPFLFEGSLRDNLDPFH---MND-D----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1368 (1460)
Q Consensus 1297 lR~~i~iVpQdp~lf~gTIR~NLdp~~---~~s-d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1368 (1460)
+|+.++|+||+|.+|++|+++|+.... ... + +++.++++.+++.+. +....+....+||+|||||++
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~LS~G~~qrv~ 155 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDE-----VKDRLKSHAFGLSGGQQQRLC 155 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchh-----hhHHhhcCcccCCHHHHHHHH
Confidence 889999999999999999999996431 111 1 122333444433221 123445666789999999999
Q ss_pred HHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1369 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1369 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
||||++.+|+|+||||||++||.++.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++..++
T Consensus 156 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 235 (249)
T PRK14253 156 IARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFSNP 235 (249)
T ss_pred HHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHcCC
Confidence 999999999999999999999999999999999987677999999999999886 8999999999999999999987654
Q ss_pred C
Q 000497 1448 C 1448 (1460)
Q Consensus 1448 ~ 1448 (1460)
.
T Consensus 236 ~ 236 (249)
T PRK14253 236 K 236 (249)
T ss_pred C
Confidence 3
No 269
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-38 Score=364.83 Aligned_cols=224 Identities=24% Similarity=0.341 Sum_probs=185.2
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-----CCCceEEECCEeCCCC--C
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--P 1293 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~i--~ 1293 (1460)
...|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +
T Consensus 37 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGE--FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred ceEEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 346999999999963 359999999999999999999999999999999999865 4999999999998643 3
Q ss_pred hHHHhcccEEEeCCCccCCccHHHhcCcCC---CC-Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000497 1294 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1365 (1460)
Q Consensus 1294 ~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~---~~-sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1365 (1460)
...+|++++|+||+|.+|++|+++|+.... .. +. +++.++++..++.+. +..........|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LSgGq~q 189 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDE-----VSDRLDKNALGLSGGQQQ 189 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccc-----hhhHhhCChhhCCHHHHH
Confidence 346788999999999999899999996431 11 11 123334444333211 122345566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHh
Q 000497 1366 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1366 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
|++|||||+++|++|||||||++||.++.+.+.+.|++..+++|||+++|+++.+.+ ||||++|++|++++.|+++++.
T Consensus 190 rv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 190 RLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999887667899999999999875 8999999999999999999998
Q ss_pred ccCCcHH
Q 000497 1445 QDECSVF 1451 (1460)
Q Consensus 1445 ~~~~~~f 1451 (1460)
+++...+
T Consensus 270 ~~~~~~~ 276 (286)
T PRK14275 270 TNPKDRM 276 (286)
T ss_pred hCCCcHH
Confidence 7655434
No 270
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-38 Score=359.55 Aligned_cols=224 Identities=26% Similarity=0.405 Sum_probs=184.8
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCC-----CceEEECCEeCCC--CChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIIN--TPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~--i~~~ 1295 (1460)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 4789999999963 46999999999999999999999999999999999999874 8999999999875 3455
Q ss_pred HHhcccEEEeCCCccCCc-cHHHhcCcCC---CC-ChHHHHH----HHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---MN-DDLKIWS----VLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1366 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~g-TIR~NLdp~~---~~-sd~ei~~----aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1366 (1460)
.+|++++|+||+|.+|++ |+++|+.... .. .+++..+ .++..++++. +.........+||||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qr 156 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDE-----VKDRLKTPATGLSGGQQQR 156 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchh-----hhhhhcCCcccCCHHHHHH
Confidence 778899999999999885 9999996321 11 2222222 2222332221 1222344566899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1367 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1367 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
++||||++++|+||||||||++||..+.+.+.+.|++..+++|+|++||+++.+.+ ||||++|++|++++.|+++++++
T Consensus 157 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 236 (252)
T PRK14272 157 LCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLFT 236 (252)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999887668999999999999986 79999999999999999999988
Q ss_pred cCCcHHHH
Q 000497 1446 DECSVFSS 1453 (1460)
Q Consensus 1446 ~~~~~f~~ 1453 (1460)
++...+.+
T Consensus 237 ~~~~~~~~ 244 (252)
T PRK14272 237 NPRDERTE 244 (252)
T ss_pred CcCcHHHH
Confidence 76544533
No 271
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.8e-38 Score=348.17 Aligned_cols=204 Identities=52% Similarity=0.902 Sum_probs=182.0
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeCcEEEEcCCCCCCC
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILS 686 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~p~l~~ 686 (1460)
++++|+++.|..... +.+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+|+|++|+|.+++
T Consensus 1 l~~~~l~~~~~~~~~-~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~ 79 (204)
T cd03250 1 ISVEDASFTWDSGEQ-ETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQN 79 (204)
T ss_pred CEEeEEEEecCCCCc-cccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhcc
Confidence 367899999864210 0123699999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCccccc
Q 000497 687 GTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVD 766 (1460)
Q Consensus 687 ~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD 766 (1460)
.|++||+.++..+++++..++.+.+++...+..+|.|++|.+++++.+||||||||++||||++++|++++|||||++||
T Consensus 80 ~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD 159 (204)
T cd03250 80 GTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVD 159 (204)
T ss_pred CcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCC
Confidence 99999999987777777888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000497 767 AQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 811 (1460)
Q Consensus 767 ~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 811 (1460)
++..+.+++.++.....+++|+|++||+.+.+..||++++|++|+
T Consensus 160 ~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 160 AHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999888887544321234689999999999988899999999985
No 272
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-38 Score=367.34 Aligned_cols=220 Identities=24% Similarity=0.418 Sum_probs=185.5
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-----CCCceEEECCEeCCCC--C
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--P 1293 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~i--~ 1293 (1460)
+..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++... +
T Consensus 43 ~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 43 DAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred CceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 447999999999964 469999999999999999999999999999999999986 6899999999998753 4
Q ss_pred hHHHhcccEEEeCCCccCCccHHHhcCcCCC---------------C-----ChHHHHHHHHHhcHHHHHHhCCCchhhh
Q 000497 1294 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---------------N-----DDLKIWSVLEKCHVKEEVEAVGLETFVK 1353 (1460)
Q Consensus 1294 ~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~---------------~-----sd~ei~~aL~~~~l~~~i~~lgLdt~v~ 1353 (1460)
...+|++++|+||++.+|++|+++|+..... . .++++.++++.+++.+ +++...+
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~~~~~~~ 195 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWD-----EVNDRLD 195 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCch-----hhhHHhc
Confidence 5678899999999999999999999974211 0 0122334444443322 1234456
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEE-EEEeC
Q 000497 1354 ESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEI-LILDH 1431 (1460)
Q Consensus 1354 e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI-lVl~~ 1431 (1460)
....+||||||||++|||||+++|+||||||||++||..+.+.+.+.|++..++.|+|+|||+++.+.. ||+| ++|++
T Consensus 196 ~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~~ 275 (305)
T PRK14264 196 DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLTG 275 (305)
T ss_pred CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEecC
Confidence 677899999999999999999999999999999999999999999999988777899999999999876 8997 56799
Q ss_pred CeEEEEcChhHHhccC
Q 000497 1432 GHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1432 G~IvE~G~p~eLl~~~ 1447 (1460)
|++++.|+++++.+++
T Consensus 276 G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 276 GELVEYDDTDKIFENP 291 (305)
T ss_pred CEEEEeCCHHHHHhCc
Confidence 9999999999998654
No 273
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-38 Score=361.20 Aligned_cols=217 Identities=22% Similarity=0.344 Sum_probs=185.4
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
-.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999963 4699999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEeCCCccCC-ccHHHhcCcCC-CC----C--hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000497 1302 AVVPQSPFLFE-GSLRDNLDPFH-MN----D--DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1302 ~iVpQdp~lf~-gTIR~NLdp~~-~~----s--d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1373 (1460)
+|+||++.+|. .|+++|+.+.. .. . .++ ......+.++.+|++........+||+|||||++||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~laral 158 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKE-----DEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVL 158 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHH-----HHHHHHHHHHHcCCHHHhcCCcccCChHHHHHHHHHHHH
Confidence 99999998875 59999997531 10 0 010 011122333444665555667778999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1374 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1374 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
+++|+++||||||++||.++.+.+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 159 ~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (265)
T PRK10253 159 AQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVT 233 (265)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhh
Confidence 999999999999999999999999999987643 7899999999998866 89999999999999999999875
No 274
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-38 Score=358.95 Aligned_cols=222 Identities=24% Similarity=0.343 Sum_probs=187.6
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCC--CChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~~ 1295 (1460)
.+.+++.+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4889999999964 4699999999999999999999999999999999999986 79999999999864 3445
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcCCC---C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1369 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~~~---~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1369 (1460)
.+|++++|+||+|.+|..|+++|+..... . .++++.++++.+++.+.+. ...++...+||+|||||++|
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-----~~~~~~~~~LS~G~~qrv~l 160 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVK-----DKLKVSGLSLSGGQQQRLCI 160 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhh-----hhhhCCcccCCHHHHHHHHH
Confidence 67889999999999999999999975421 1 1234555566555433221 23445667899999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe--------CCeEEEEcCh
Q 000497 1370 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD--------HGHLVEQGNP 1440 (1460)
Q Consensus 1370 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~--------~G~IvE~G~p 1440 (1460)
|||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.+ ||||++|+ +|++++.|++
T Consensus 161 aral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 161 ARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 99999999999999999999999999999999987778899999999998875 89999996 8999999999
Q ss_pred hHHhccCCcHH
Q 000497 1441 QTLLQDECSVF 1451 (1460)
Q Consensus 1441 ~eLl~~~~~~f 1451 (1460)
+++++++...+
T Consensus 241 ~~~~~~~~~~~ 251 (261)
T PRK14263 241 AQIFQNPREQL 251 (261)
T ss_pred HHHHhCCCcHH
Confidence 99987654333
No 275
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-38 Score=352.17 Aligned_cols=204 Identities=26% Similarity=0.430 Sum_probs=174.0
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 478999999963 469999999999999999999999999999999999999999999999998753 56789999
Q ss_pred EeCCCccCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1304 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+||++.+|++ |+++|+..... ....+. ...+.+.++.+|++........+||+|||||++||||++++|++
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~ 149 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEA-----RRRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAVIHDPEL 149 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHH-----HHHHHHHHHHcCChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999886 99999864321 111111 11234455556777767777778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEc
Q 000497 1380 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1438 (1460)
+||||||++||+++.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 150 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 150 LILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999998764 47899999999999876 8999999999998865
No 276
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-38 Score=356.54 Aligned_cols=204 Identities=28% Similarity=0.375 Sum_probs=175.6
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
-.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 11 ~~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 11 TPLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred CcEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 45999999999964 46999999999999999999999999999999999999999999999998763 467899
Q ss_pred EEEeCCCccCC-ccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1302 AVVPQSPFLFE-GSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1302 ~iVpQdp~lf~-gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+|+||+|.+|+ .|+++|+.+... ..++++.+++ +.+|++........+||||||||++|||||+++|++
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l---------~~~gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~l 154 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQAL---------AAVGLADRANEWPAALSGGQKQRVALARALIHRPGL 154 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHH---------HHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999987 599999975321 1123333333 344565556666778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChh
Q 000497 1380 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQ 1441 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~ 1441 (1460)
|||||||++||..+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 155 llLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 155 LLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999998763 37999999999999865 8999999999999988754
No 277
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-38 Score=354.13 Aligned_cols=217 Identities=27% Similarity=0.404 Sum_probs=183.5
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++|++++|+. .++++|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.+++
T Consensus 1 l~~~~l~~~~~~--~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGG--FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 478999999964 369999999999999999999999999999999999999999999999999987664 3678999
Q ss_pred EeCCCccCCc-cHHHhcCcCCC-C-ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000497 1304 VPQSPFLFEG-SLRDNLDPFHM-N-DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1380 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~~~-~-sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1380 (1460)
+||+|.+|.+ |+++|+.+... . .+.+. . .....+.++.+|++........+||+|||||++||||++++|+++
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~--~--~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~ll 152 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAE--I--KERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKVL 152 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHH--H--HHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999976 99999864211 1 11110 0 112233444457766666677789999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCC
Q 000497 1381 CLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1448 (1460)
Q Consensus 1381 lLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1448 (1460)
||||||++||..+.+.+.+.|++..+ ++|||+++|+++.+.. ||||++|++|++++.|+++++.+.+.
T Consensus 153 llDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~~ 223 (232)
T cd03300 153 LLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEPA 223 (232)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCCc
Confidence 99999999999999999999987643 8999999999999875 79999999999999999999987543
No 278
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-38 Score=357.95 Aligned_cols=217 Identities=26% Similarity=0.370 Sum_probs=183.6
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 2 MLEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 3789999999964 46999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEeCCCcc-CCccHHHhcCcCCC-C--ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc----
Q 000497 1303 VVPQSPFL-FEGSLRDNLDPFHM-N--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL---- 1374 (1460)
Q Consensus 1303 iVpQdp~l-f~gTIR~NLdp~~~-~--sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL---- 1374 (1460)
++||++.+ +..|+++|+..... . ..++.. ....+.++.+|++.........||||||||++|||||+
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgGe~qrv~la~al~~~~~ 154 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDD-----ALVAAALAQVDLAHLAGRDYPQLSGGEQQRVQLARVLAQLWE 154 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHH-----HHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhcccc
Confidence 99999987 56799999865321 1 111100 01223333345655555666789999999999999999
Q ss_pred --cCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1375 --KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1375 --r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
++|++|+|||||++||+++.+.+.+.|++.. +++|||++||+++.+. -||+|++|++|++++.|+++++.+.
T Consensus 155 ~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (258)
T PRK13548 155 PDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLTP 231 (258)
T ss_pred cCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhCh
Confidence 5999999999999999999999999998764 4789999999999987 4899999999999999999998763
No 279
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.9e-38 Score=365.08 Aligned_cols=213 Identities=30% Similarity=0.504 Sum_probs=185.0
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.++++|++.+|+. ...+|+||||+|++||.+|++||||||||||+++|.|+++|++|+|.++|.|...- ....|++++
T Consensus 4 ~i~~~~l~k~~~~-~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG-DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC-CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 4788999999973 24699999999999999999999999999999999999999999999999998765 678899999
Q ss_pred EEeCCCccCCc-cHHHhcCcCCCC-------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000497 1303 VVPQSPFLFEG-SLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1374 (1460)
Q Consensus 1303 iVpQdp~lf~g-TIR~NLdp~~~~-------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1374 (1460)
|+||+|.+++. |++|||+++... .++++.+.++..+ |+..-+.....||+|||||+.||+||+
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~---------L~~~~~~~~~~lS~G~kqrl~ia~aL~ 152 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFG---------LEDKANKKVRTLSGGMKQRLSIALALL 152 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcC---------CchhhCcchhhcCHHHHHHHHHHHHHh
Confidence 99999998877 999999875321 1334555555554 443223345579999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcC-C-cEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1375 KSSKVLCLDECTANVDAQTASILQNAISSECK-G-MTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1375 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~-~-~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
.+|++|||||||++||+.+...+.+.|++..+ + +||++.||.++.+.. ||||++|++|+++..|+++++...
T Consensus 153 ~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 153 HDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred cCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999998865 4 799999999999987 999999999999999999998654
No 280
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.8e-38 Score=352.09 Aligned_cols=200 Identities=31% Similarity=0.421 Sum_probs=169.9
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HHhcc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1300 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~ 1300 (1460)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+.. .+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 7899999999522 4699999999999999999999999999999999999999999999999999887643 46789
Q ss_pred cEEEeCCCccCC-ccHHHhcCcCC---CCC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000497 1301 FAVVPQSPFLFE-GSLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1372 (1460)
Q Consensus 1301 i~iVpQdp~lf~-gTIR~NLdp~~---~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1372 (1460)
++|+||+|.+|. .|+++|+.... ... +++++++++. +|++........+||||||||++||||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~G~~qrl~la~a 151 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQ---------VGLEHKADAFPEQLSGGEQQRVAIARA 151 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHH---------cCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 999999999986 59999986431 111 1233344444 355444444556899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCe
Q 000497 1373 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGH 1433 (1460)
Q Consensus 1373 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~ 1433 (1460)
|+++|+++||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|+
T Consensus 152 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 152 IVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999998764 48999999999999986 79999999985
No 281
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-38 Score=361.33 Aligned_cols=221 Identities=25% Similarity=0.364 Sum_probs=186.2
Q ss_pred CccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCC--CC
Q 000497 1221 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TP 1293 (1460)
Q Consensus 1221 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~ 1293 (1460)
.-.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 18 ~~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 18 HSVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred CceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 346999999999964 3699999999999999999999999999999999999863 59999999999864 34
Q ss_pred hHHHhcccEEEeCCCccCCccHHHhcCcCCC---C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1294 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1294 ~~~lR~~i~iVpQdp~lf~gTIR~NLdp~~~---~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
...+|++++|+||++.+|+.|+++|+..... . .++++.++++.+++.+.+ ..........||+|||||+
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LSgGq~qrv 170 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-----KDKLKEKGTALSGGQQQRL 170 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-----HHHhcCCcccCCHHHHHHH
Confidence 4567899999999999998999999965321 1 123344455555543322 2234455678999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe---------CCeEEEE
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD---------HGHLVEQ 1437 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~---------~G~IvE~ 1437 (1460)
+|||||+++|++|||||||++||..+.+.+.+.|++..+++|||+|+|+++.+.. ||||++|+ +|++++.
T Consensus 171 ~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~ 250 (274)
T PRK14265 171 CIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEF 250 (274)
T ss_pred HHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999988778999999999999865 79999997 8999999
Q ss_pred cChhHHhccCC
Q 000497 1438 GNPQTLLQDEC 1448 (1460)
Q Consensus 1438 G~p~eLl~~~~ 1448 (1460)
|+++++..++.
T Consensus 251 g~~~~~~~~~~ 261 (274)
T PRK14265 251 SPTEQMFGSPQ 261 (274)
T ss_pred CCHHHHHhCCC
Confidence 99999987654
No 282
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.2e-37 Score=358.04 Aligned_cols=225 Identities=24% Similarity=0.362 Sum_probs=184.8
Q ss_pred cEEEEEEEEEecC-------CCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChH
Q 000497 1223 LIEFQNVTMRYKP-------SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~-------~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~ 1295 (1460)
.|+++||+++|+. +..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 4899999999952 124699999999999999999999999999999999999999999999999999766666
Q ss_pred HHhcccEEEeCCCc--cCCc-cHHHhcCcC---C-CCCh----HHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhH
Q 000497 1296 DLRGRFAVVPQSPF--LFEG-SLRDNLDPF---H-MNDD----LKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQ 1363 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~--lf~g-TIR~NLdp~---~-~~sd----~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQ 1363 (1460)
..|++++|+||+|. +++. |+.+|+... + .... +++.+++ +.+|++ ........+||+||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l---------~~~~l~~~~~~~~~~~LS~G~ 154 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETL---------RQVGLLPDHASYYPHMLAPGQ 154 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHH---------HHcCCChHHHhcCchhcCHHH
Confidence 66778999999985 4544 888887531 1 1111 2233333 344553 22334456899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcCh
Q 000497 1364 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1440 (1460)
Q Consensus 1364 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1440 (1460)
|||++||||++++|+||||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++
T Consensus 155 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 234 (267)
T PRK15112 155 KQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGST 234 (267)
T ss_pred HHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCH
Confidence 999999999999999999999999999999999999998864 37899999999999987 899999999999999999
Q ss_pred hHHhccCC-cHHHHHHH
Q 000497 1441 QTLLQDEC-SVFSSFVR 1456 (1460)
Q Consensus 1441 ~eLl~~~~-~~f~~l~~ 1456 (1460)
+++.+++. ..+++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~ 251 (267)
T PRK15112 235 ADVLASPLHELTKRLIA 251 (267)
T ss_pred HHHhcCCCCHHHHHHHH
Confidence 99987653 34556665
No 283
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=9.1e-38 Score=349.90 Aligned_cols=206 Identities=27% Similarity=0.380 Sum_probs=173.2
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHH---Hhcc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LRGR 1300 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR~~ 1300 (1460)
|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++... +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999432 46999999999999999999999999999999999999999999999999998876543 6889
Q ss_pred cEEEeCCCccC-CccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1301 FAVVPQSPFLF-EGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1301 i~iVpQdp~lf-~gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
++|+||+|.+| ..|+++|+.... ..++++..+. ..+.++.+|++........+||+|||||++||||++++
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRR-----VSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNK 155 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHH-----HHHHHHHcCChhhhhCCchhCCHHHHHHHHHHHHHHcC
Confidence 99999999875 569999996531 1222222211 12233444665555666678999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEE
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLV 1435 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~Iv 1435 (1460)
|++|||||||++||.++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 156 PAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEc
Confidence 99999999999999999999999998763 47899999999999976 7999999999985
No 284
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=6e-38 Score=352.96 Aligned_cols=211 Identities=24% Similarity=0.320 Sum_probs=176.0
Q ss_pred ccEEEEEEEEEecCCC--CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHH---
Q 000497 1222 GLIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD--- 1296 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~--- 1296 (1460)
..|+++|++++|+++. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 3699999999997532 25999999999999999999999999999999999999999999999999998877653
Q ss_pred H-hcccEEEeCCCccCCc-cHHHhcCcC---CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000497 1297 L-RGRFAVVPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1371 (1460)
Q Consensus 1297 l-R~~i~iVpQdp~lf~g-TIR~NLdp~---~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1371 (1460)
. +++++++||+|.+|++ |+++|+... ......+. +..+.+.++.+|++.........||+|||||++|||
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrl~la~ 159 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQS-----RNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALAR 159 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHH
Confidence 2 3679999999999885 999998642 11111111 112233444445655555566689999999999999
Q ss_pred HHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCeEEEE
Q 000497 1372 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1437 (1460)
Q Consensus 1372 ALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~ 1437 (1460)
||+++|++|||||||++||.++.+.+.+.|++.. .++|||+|+|+++.+..||+|++|++|+++|.
T Consensus 160 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 160 AFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999998764 27899999999999988999999999999874
No 285
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-38 Score=358.52 Aligned_cols=221 Identities=25% Similarity=0.369 Sum_probs=185.8
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCC-----CceEEECCEeCCC--CCh
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIIN--TPV 1294 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~--i~~ 1294 (1460)
+.|+++|++++|+. +.+|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.|++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 46999999999964 36999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HHHhcccEEEeCCCccCCccHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000497 1295 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1366 (1460)
Q Consensus 1295 ~~lR~~i~iVpQdp~lf~gTIR~NLdp~~----~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1366 (1460)
..+|+.++++||++.+|+.|++||+.... ..++ +++.++++.+++.+.+ +...+.....||+|||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq~qr 158 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEI-----KHKIHKSALDLSGGQQQR 158 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchh-----hhHhcCCcccCCHHHHHH
Confidence 67889999999999999999999996421 1121 2234445554443322 223456667899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeC-----CeEEEEc
Q 000497 1367 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDH-----GHLVEQG 1438 (1460)
Q Consensus 1367 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~-----G~IvE~G 1438 (1460)
++||||++++|++|||||||++||.++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++ |++++.|
T Consensus 159 v~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 238 (261)
T PRK14258 159 LCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEFG 238 (261)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEeC
Confidence 999999999999999999999999999999999998742 48999999999999875 799999999 9999999
Q ss_pred ChhHHhccCCc
Q 000497 1439 NPQTLLQDECS 1449 (1460)
Q Consensus 1439 ~p~eLl~~~~~ 1449 (1460)
+|+++.+++..
T Consensus 239 ~~~~~~~~~~~ 249 (261)
T PRK14258 239 LTKKIFNSPHD 249 (261)
T ss_pred CHHHHHhCCCC
Confidence 99999876554
No 286
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-38 Score=370.14 Aligned_cols=226 Identities=21% Similarity=0.325 Sum_probs=183.6
Q ss_pred cEEEEEEEEEecC--CCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC----CCCceEEECCEeCCCCChHH
Q 000497 1223 LIEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP----ICGGQILVDGLNIINTPVRD 1296 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~----~~~G~I~IDG~di~~i~~~~ 1296 (1460)
.++++|++++|+. +...+|+||||+|++||.+||+|+||||||||+++|.|+.+ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4899999999953 22469999999999999999999999999999999999986 58999999999999888766
Q ss_pred Hh----cccEEEeCCCc--cCC-ccHHHhcCcC-------CC-CCh-HHHHHHHHHhcHHHHHHhCCCch---hhhcCCC
Q 000497 1297 LR----GRFAVVPQSPF--LFE-GSLRDNLDPF-------HM-NDD-LKIWSVLEKCHVKEEVEAVGLET---FVKESGI 1357 (1460)
Q Consensus 1297 lR----~~i~iVpQdp~--lf~-gTIR~NLdp~-------~~-~sd-~ei~~aL~~~~l~~~i~~lgLdt---~v~e~G~ 1357 (1460)
++ +++++|||+|. +++ -||.+|+... +. ..+ .+. +....+.++.+||+. .......
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~~~gL~~~~~~~~~~p~ 157 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWR-----KRRAIELLHRVGIKDHKDAMRSFPY 157 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHH-----HHHHHHHHHHCCCCChHHHHhCCch
Confidence 53 47999999996 333 4888887420 00 011 011 111233444445542 2455667
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeE
Q 000497 1358 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHL 1434 (1460)
Q Consensus 1358 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~I 1434 (1460)
.||||||||++|||||+.+|+|||+||||++||..+...+.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|
T Consensus 158 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~i 237 (330)
T PRK15093 158 ELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQT 237 (330)
T ss_pred hCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEE
Confidence 8999999999999999999999999999999999999999999987643 7899999999999975 899999999999
Q ss_pred EEEcChhHHhccCCcHHHH
Q 000497 1435 VEQGNPQTLLQDECSVFSS 1453 (1460)
Q Consensus 1435 vE~G~p~eLl~~~~~~f~~ 1453 (1460)
+|.|+++++.+++...|.+
T Consensus 238 ve~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 238 VETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred EEECCHHHHHhCCCCHHHH
Confidence 9999999998876655654
No 287
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-38 Score=348.34 Aligned_cols=200 Identities=25% Similarity=0.400 Sum_probs=170.0
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++|++++|++. . .|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999642 2 39999999999999999999999999999999999999999999999987654 3678999
Q ss_pred EeCCCccCCc-cHHHhcCcCCCC-------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1304 VPQSPFLFEG-SLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~~~~-------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
+||+|.+|++ |+++|+.+.... .++++.++++.+ |++........+||+|||||++||||+++
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~ia~al~~ 145 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARV---------GLAGLEKRLPGELSGGERQRVALARVLVR 145 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHc---------CCHHHHhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999986 999999743211 122334444444 55544555566899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEc
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1438 (1460)
+|+++||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 146 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 146 DKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999998764 37899999999999976 8999999999998764
No 288
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-38 Score=357.72 Aligned_cols=222 Identities=25% Similarity=0.351 Sum_probs=185.0
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC--C---CCceEEECCEeCCC--CChH
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIIN--TPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~--i~~~ 1295 (1460)
.|+++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999964 469999999999999999999999999999999999975 4 58999999999864 3455
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcCC---CC-C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~~---~~-s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1367 (1460)
.+|++++|+||+|.+|+.|+++|+.... .. . ++++.++++.+++.+ ++.........+||+|||||+
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~i~~~~~~~~~~LS~Gq~qrv 157 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWD-----EVKDHLHESALSLSGGQQQRV 157 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCcc-----chhhHHhcCcccCCHHHHHHH
Confidence 6788999999999999999999986421 11 1 122333444443321 122345556678999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||||++++|++|||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|++.+...+
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 237 (252)
T PRK14255 158 CIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMFLN 237 (252)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999887667899999999999875 899999999999999999999876
Q ss_pred CCcHH
Q 000497 1447 ECSVF 1451 (1460)
Q Consensus 1447 ~~~~f 1451 (1460)
+...+
T Consensus 238 ~~~~~ 242 (252)
T PRK14255 238 PKEKE 242 (252)
T ss_pred CCChH
Confidence 65433
No 289
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5e-38 Score=332.77 Aligned_cols=204 Identities=31% Similarity=0.403 Sum_probs=174.7
Q ss_pred CceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC----------
Q 000497 604 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 673 (1460)
Q Consensus 604 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 673 (1460)
+..|+++++++++.. +.+++|+||+|++||+++|+|||||||||||++|+|+++|++|+|.+.|
T Consensus 6 ~~~I~vr~v~~~fG~------~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~ 79 (263)
T COG1127 6 EPLIEVRGVTKSFGD------RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEE 79 (263)
T ss_pred cceEEEeeeeeecCC------EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHH
Confidence 567999999999853 3469999999999999999999999999999999999999999999987
Q ss_pred ------cEEEEcCCCCCCCc-cHHHHHccCC----CCChHHHH----HHHHHhcchHH-HhhccCCCcccccCCCCcccc
Q 000497 674 ------SIAYVPQVPWILSG-TIRDNILFGK----NYDPQSYS----ETLKACTLDVD-ISLMVGGDMAYIGEKGVNLSG 737 (1460)
Q Consensus 674 ------~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~~~~~~----~v~~~~~l~~d-i~~~~~gd~t~vg~~g~~LSG 737 (1460)
++|+++|+--||+. ||+||+.|.- ..+++.++ .-+++++|..+ .+.+|. .|||
T Consensus 80 ~~~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~Ps-----------ELSG 148 (263)
T COG1127 80 LYEIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPS-----------ELSG 148 (263)
T ss_pred HHHHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCch-----------hhcc
Confidence 59999999999987 9999999952 34554444 35678888877 666664 8999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCc-ccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEe
Q 000497 738 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 815 (1460)
Q Consensus 738 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~-~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 815 (1460)
|++.|+|||||+..||+++++|||||+|||.++..+- +++... ..-+-|+|+|||+++.+.. ||+|+++.||+|...
T Consensus 149 GM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~-~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~ 227 (263)
T COG1127 149 GMRKRVALARAIALDPELLFLDEPTSGLDPISAGVID-ELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAE 227 (263)
T ss_pred hHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHH-HHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEe
Confidence 9999999999999999999999999999999877544 434321 2236799999999998765 899999999999999
Q ss_pred cCHHHHHhcc
Q 000497 816 GSSADLAVSL 825 (1460)
Q Consensus 816 g~~~~l~~~~ 825 (1460)
|+++|+.+..
T Consensus 228 Gt~~el~~sd 237 (263)
T COG1127 228 GTPEELLASD 237 (263)
T ss_pred CCHHHHHhCC
Confidence 9999997643
No 290
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=8e-38 Score=357.87 Aligned_cols=215 Identities=23% Similarity=0.344 Sum_probs=182.7
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 689999999964 469999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EeCCCc-cCCccHHHhcCcCCC-C------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1304 VPQSPF-LFEGSLRDNLDPFHM-N------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1304 VpQdp~-lf~gTIR~NLdp~~~-~------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
+||+|. .+..|+++|+..+.. . ..++ ....+.+.++.+|++.........||+|||||++||||++.
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~ 154 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPH-----DAAVVDRALARTELSHLADRDMSTLSGGERQRVHVARALAQ 154 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHH-----HHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhc
Confidence 999985 456799999965321 0 0000 01112333444455544556667899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHhc
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
+|+++||||||++||.++.+.+.+.|++.. ++.|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 155 EPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 999999999999999999999999998764 3789999999999995 589999999999999999999865
No 291
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=7.9e-38 Score=349.37 Aligned_cols=208 Identities=25% Similarity=0.380 Sum_probs=182.1
Q ss_pred EEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh----HHHhcc
Q 000497 1225 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV----RDLRGR 1300 (1460)
Q Consensus 1225 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~----~~lR~~ 1300 (1460)
.+.|+.++|+++ .++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 578999999755 569999999999999999999999999999999999999999999999998876542 345678
Q ss_pred cEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1301 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1301 i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
++|+||+|.+|+.|+++|+......++++.+++++.+++.+.++.+ |+++.++....+||+|||||++||||++++|+
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 160 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTN 160 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 9999999999999999999875545566677888888888777665 78888888888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHH--HHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCe
Q 000497 1379 VLCLDECTANVDAQTASILQN--AISSEC-KGMTVITIAHRISTVLNMDEILILDHGH 1433 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~--~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl~~G~ 1433 (1460)
||||||||++||..+.+.+.+ .++... ++.|+|++||+++.+..||+|++|++|+
T Consensus 161 illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 161 IVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred EEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999999887776 444332 3689999999999999999999999984
No 292
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.8e-38 Score=318.40 Aligned_cols=199 Identities=29% Similarity=0.391 Sum_probs=171.2
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------cE
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 675 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 675 (1460)
+.++++.|+|... + -..+++|++||+++|+|||||||||||++|+|+..|.+|+|.++| .+
T Consensus 2 l~L~~V~~~y~~~---~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPV 73 (231)
T COG3840 2 LALDDVRFSYGHL---P-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPV 73 (231)
T ss_pred ccccceEEeeCcc---e-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCCh
Confidence 3456778887542 2 246789999999999999999999999999999999999999987 48
Q ss_pred EEEcCCCCCCCc-cHHHHHccCCC-------CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHH
Q 000497 676 AYVPQVPWILSG-TIRDNILFGKN-------YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 747 (1460)
Q Consensus 676 ~y~~Q~p~l~~~-ti~~nI~~g~~-------~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lAR 747 (1460)
+.++|+..||.- ||++||-+|.. .+.++.+.++...+|....+++|. .|||||||||||||
T Consensus 74 SmlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALAR 142 (231)
T COG3840 74 SMLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALAR 142 (231)
T ss_pred hhhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHH
Confidence 999999999987 99999999853 245678888889999999998886 89999999999999
Q ss_pred HHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHhc
Q 000497 748 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVS 824 (1460)
Q Consensus 748 aly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~~ 824 (1460)
++.++.+|++||||||||||.-+.....-+..-...++.|+++|||+++.+.. +|+++++++|+|.++|+.+++...
T Consensus 143 clvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 143 CLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 99999999999999999999988776654211113457799999999998775 999999999999999999887643
No 293
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-37 Score=354.22 Aligned_cols=227 Identities=27% Similarity=0.372 Sum_probs=188.0
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECC------EeCCCCChH
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDG------LNIINTPVR 1295 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG------~di~~i~~~ 1295 (1460)
..++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| .++.+.+..
T Consensus 9 ~~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 9 DVFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred hheeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 35999999999964 4699999999999999999999999999999999999999997666655 677777777
Q ss_pred HHhcccEEEeCCCccCCc-cHHHhcCcCC---CC-ChHHHHHHHHHhcHHHHHHhCCCc----hhhhcCCCCCChhHHHH
Q 000497 1296 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---MN-DDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQL 1366 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~g-TIR~NLdp~~---~~-sd~ei~~aL~~~~l~~~i~~lgLd----t~v~e~G~~LSgGQrQr 1366 (1460)
.+|++++|+||+|.+|++ |+++|+.... .. .+++.++. +.+.++.+|++ ...+..+..||+|||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qr 161 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKI-----VEECLRKVGLWKEVYDRLNSPASQLSGGQQQR 161 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHH-----HHHHHHHcCCCccchhhhcCCcccCCHHHHHH
Confidence 889999999999999986 9999997431 11 22232221 22233334553 23455667899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHhc
Q 000497 1367 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1367 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
++||||++++|++++|||||++||..+.+.+.+.|++..+++|+|+|||+++.+. .||++++|++|++++.|+++++.+
T Consensus 162 l~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~~ 241 (257)
T PRK14246 162 LTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIFT 241 (257)
T ss_pred HHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999988767899999999999995 589999999999999999999987
Q ss_pred cCCcHHHHHH
Q 000497 1446 DECSVFSSFV 1455 (1460)
Q Consensus 1446 ~~~~~f~~l~ 1455 (1460)
++...+.+.+
T Consensus 242 ~~~~~~~~~~ 251 (257)
T PRK14246 242 SPKNELTEKY 251 (257)
T ss_pred CCCcHHHHHH
Confidence 7654454443
No 294
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-38 Score=360.41 Aligned_cols=202 Identities=32% Similarity=0.408 Sum_probs=174.6
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------c
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 674 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 674 (1460)
.|+++|++-.|... . +++|+||+|++||+++++|||||||||||++|+|+.+|++|+|.++| .
T Consensus 3 ~i~l~~v~K~yg~~-----~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~ 76 (338)
T COG3839 3 ELELKNVRKSFGSF-----E-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRG 76 (338)
T ss_pred EEEEeeeEEEcCCc-----e-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCC
Confidence 47899999998642 1 49999999999999999999999999999999999999999999987 5
Q ss_pred EEEEcCCCCCCCc-cHHHHHccCCCCC-------hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000497 675 IAYVPQVPWILSG-TIRDNILFGKNYD-------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 746 (1460)
Q Consensus 675 i~y~~Q~p~l~~~-ti~~nI~~g~~~~-------~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 746 (1460)
||+|+|+.-|++. ||+|||.||.... +++.+++.+..++++-+++.|. .||||||||||||
T Consensus 77 iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAla 145 (338)
T COG3839 77 IAMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALA 145 (338)
T ss_pred EEEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHH
Confidence 9999999999876 9999999986542 4678888888888887776554 8999999999999
Q ss_pred HHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000497 747 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 824 (1460)
Q Consensus 747 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 824 (1460)
||+.++|+++|||||+|+||++....+-..+..-....+.|+|.|||+..+.. .||+|.+|++|+|.+.|++.|+...
T Consensus 146 RAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~ 224 (338)
T COG3839 146 RALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYER 224 (338)
T ss_pred HHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhC
Confidence 99999999999999999999998877665522111223679999999987754 5999999999999999999999754
No 295
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-37 Score=349.63 Aligned_cols=214 Identities=27% Similarity=0.444 Sum_probs=180.6
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++|++++|+. .+|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~---~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE---FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC---ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 478999999963 38999999999999999999999999999999999999999999999999987654 3789999
Q ss_pred EeCCCccCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1304 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1304 VpQdp~lf~-gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+||++.+|+ .|+++|+.... ..+..+..+ .+.+.++.+|+...+.....+||+|||||++||||++++|++
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~l 150 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIER-----KVLEIAEMLGIDHLLNRKPETLSGGEQQRVAIARALVVNPKI 150 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCChhHHhcCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 999999886 69999996321 111111111 122333444555555666678999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1380 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
++|||||++||.++.+.+.+.+++..+ ++|+|++||+++.+.+ ||+|++|++|++++.|+++++.+.+
T Consensus 151 lllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 151 LLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 999999999999999999999987643 8999999999999876 8999999999999999999998764
No 296
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=4.6e-38 Score=352.58 Aligned_cols=211 Identities=25% Similarity=0.347 Sum_probs=180.6
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++|++++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5999999999963 46999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEeCCCccCCccHHHhcCcCCCC--ChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1303 VVPQSPFLFEGSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1303 iVpQdp~lf~gTIR~NLdp~~~~--sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
++||+|.+|+.|+++|+...... .+.+ ...+.+.++.+|++ +.......+||+|||||++|||||+++|++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~l 158 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPD------PAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMPKV 158 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChH------HHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999642110 1100 01123444555774 456677789999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEe-CCeEEEEcChh
Q 000497 1380 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILD-HGHLVEQGNPQ 1441 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~-~G~IvE~G~p~ 1441 (1460)
+||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 159 LLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999998764 3789999999999998899999995 56667778874
No 297
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-38 Score=343.05 Aligned_cols=200 Identities=30% Similarity=0.458 Sum_probs=169.5
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC----------c
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------S 674 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------~ 674 (1460)
..|+++|++|.|... + +|+||||++++|++++|+||||||||||+|+|+|.++|.+|+|.+.| +
T Consensus 3 ~~i~v~nl~v~y~~~---~---vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~ 76 (254)
T COG1121 3 PMIEVENLTVSYGNR---P---VLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLR 76 (254)
T ss_pred cEEEEeeeEEEECCE---e---eeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCe
Confidence 468999999999742 2 59999999999999999999999999999999999999999999865 5
Q ss_pred EEEEcCCC---CCCCccHHHHHccCCCC-----------ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000497 675 IAYVPQVP---WILSGTIRDNILFGKNY-----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 740 (1460)
Q Consensus 675 i~y~~Q~p---~l~~~ti~~nI~~g~~~-----------~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQk 740 (1460)
||||||.. |-|..||+|-+..|... |.+..+++++..++. |+. ...-..|||||+
T Consensus 77 IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-~~~----------~r~i~~LSGGQ~ 145 (254)
T COG1121 77 IGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-DLR----------DRQIGELSGGQK 145 (254)
T ss_pred EEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-hhh----------CCcccccCcHHH
Confidence 99999954 78899999999987432 346778888888887 333 233348999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHH
Q 000497 741 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 819 (1460)
Q Consensus 741 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 819 (1460)
|||-|||||.++||+|+|||||+++|+.++..+++- +.....+|+||++|||+++.+. ++|+|+.|+ +++...|+++
T Consensus 146 QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~l-L~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~ 223 (254)
T COG1121 146 QRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDL-LKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPE 223 (254)
T ss_pred HHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChh
Confidence 999999999999999999999999999999988775 3332334899999999999876 599999995 5788899998
Q ss_pred HHHh
Q 000497 820 DLAV 823 (1460)
Q Consensus 820 ~l~~ 823 (1460)
+...
T Consensus 224 ~~~~ 227 (254)
T COG1121 224 EVLT 227 (254)
T ss_pred hccC
Confidence 8754
No 298
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.9e-37 Score=356.26 Aligned_cols=213 Identities=38% Similarity=0.661 Sum_probs=192.0
Q ss_pred CCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeCcEEEEcCC
Q 000497 602 SKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQV 681 (1460)
Q Consensus 602 ~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~ 681 (1460)
+.+..++++|+++.+ +++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++|.++|++|+
T Consensus 35 ~~~~~l~i~nls~~~--------~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g~i~yv~q~ 106 (282)
T cd03291 35 SDDNNLFFSNLCLVG--------APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSGRISFSSQF 106 (282)
T ss_pred CCCCeEEEEEEEEec--------ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEEEEeCc
Confidence 345679999999852 225999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCC
Q 000497 682 PWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDV 761 (1460)
Q Consensus 682 p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~ 761 (1460)
+++++.|++||+.++..+++.++.+.++++++...+..+|.+.++.+++++.+||||||||++||||++++|+++|||||
T Consensus 107 ~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEP 186 (282)
T cd03291 107 SWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSP 186 (282)
T ss_pred ccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 99999999999998765566677788888999988999999999999999999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHh
Q 000497 762 LSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 762 ~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
|++||+.+.+.+.+.++.. +.+++|+|++||+++.++.||++++|++|++++.|+++++..
T Consensus 187 t~gLD~~~~~~l~~~ll~~-~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 247 (282)
T cd03291 187 FGYLDVFTEKEIFESCVCK-LMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQS 247 (282)
T ss_pred CccCCHHHHHHHHHHHHHH-hhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999988887753322 345789999999999998899999999999999999988764
No 299
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=5.1e-38 Score=349.89 Aligned_cols=204 Identities=26% Similarity=0.416 Sum_probs=173.7
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCC--CChHHHhccc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRF 1301 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~--i~~~~lR~~i 1301 (1460)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 478999999964 469999999999999999999999999999999999999999999999999853 4556778999
Q ss_pred EEEeCCCccCC-ccHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1302 AVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1302 ~iVpQdp~lf~-gTIR~NLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
+|+||+|.+|+ .|+++|+.... ..+.++..+ ...+.++.+|++........+||+|||||++||||++++
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 153 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEE-----RALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMN 153 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHHhcC
Confidence 99999999887 59999996532 122222111 123445555777667777789999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeE
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1434 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~I 1434 (1460)
|++|||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.+ ||+|++|++|++
T Consensus 154 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 154 PKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999998764 47899999999999975 899999999975
No 300
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=4.3e-38 Score=350.32 Aligned_cols=201 Identities=33% Similarity=0.457 Sum_probs=166.1
Q ss_pred EEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000497 1225 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1304 (1460)
Q Consensus 1225 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iV 1304 (1460)
+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 46899999964 46999999999999999999999999999999999999999999999998874 468899999
Q ss_pred eCCCcc---CCccHHHhcCcCCCC-------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000497 1305 PQSPFL---FEGSLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1374 (1460)
Q Consensus 1305 pQdp~l---f~gTIR~NLdp~~~~-------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1374 (1460)
||+|.+ |+.|++||+...... ..++. ...+.+.++.+|++........+||||||||++|||||+
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~ 148 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKAD-----KAKVDEALERVGLSELADRQIGELSGGQQQRVLLARALV 148 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHH-----HHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHH
Confidence 999976 568999998643211 11111 111233334445555455566789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEc
Q 000497 1375 KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1375 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1438 (1460)
++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++| +++.|
T Consensus 149 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 149 QDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999998764 57899999999999876 7999999986 55544
No 301
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-38 Score=343.93 Aligned_cols=216 Identities=30% Similarity=0.421 Sum_probs=183.0
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCE---eCCCCChHHHhc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL---NIINTPVRDLRG 1299 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~---di~~i~~~~lR~ 1299 (1460)
.|+++|++..|+. .++++|||++|+.||.+|+.||||||||||+.+|.|+..|++|+|.+||. |.++++.+ .+
T Consensus 2 ~i~i~~~~~~~~~--~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~R 77 (345)
T COG1118 2 SIRINNVKKRFGA--FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--DR 77 (345)
T ss_pred ceeehhhhhhccc--ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--hc
Confidence 3788899888864 46899999999999999999999999999999999999999999999999 77774433 46
Q ss_pred ccEEEeCCCccCCc-cHHHhcCcCCCC-----ChH----HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000497 1300 RFAVVPQSPFLFEG-SLRDNLDPFHMN-----DDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1369 (1460)
Q Consensus 1300 ~i~iVpQdp~lf~g-TIR~NLdp~~~~-----sd~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1369 (1460)
+||+|.||.-||.- ||++||.++-+. ++. ++.+.|+.+ .|+-.-..-..+||||||||++|
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lv---------qL~~la~ryP~QLSGGQrQRVAL 148 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLV---------QLEGLADRYPAQLSGGQRQRVAL 148 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHh---------cccchhhcCchhcChHHHHHHHH
Confidence 89999999999975 999999876422 222 223333333 33333345567899999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1370 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1370 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
||||.-.|++|+||||.++||++-.+.+++-+++.. -++|+++|||+.+.+.+ ||||+||++|+|...|+|+|....
T Consensus 149 ARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~ 228 (345)
T COG1118 149 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDH 228 (345)
T ss_pred HHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcC
Confidence 999999999999999999999999999999888764 38999999999998765 899999999999999999999999
Q ss_pred CCcHH
Q 000497 1447 ECSVF 1451 (1460)
Q Consensus 1447 ~~~~f 1451 (1460)
+++.|
T Consensus 229 P~s~f 233 (345)
T COG1118 229 PASRF 233 (345)
T ss_pred CCccc
Confidence 88766
No 302
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=6.6e-38 Score=366.32 Aligned_cols=207 Identities=26% Similarity=0.400 Sum_probs=174.9
Q ss_pred EecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccC
Q 000497 1232 RYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF 1311 (1460)
Q Consensus 1232 ~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf 1311 (1460)
+|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4642 469999999999999999999999999999999999999999999999999976 3456788999999999999
Q ss_pred Cc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecccc
Q 000497 1312 EG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTA 1387 (1460)
Q Consensus 1312 ~g-TIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS 1387 (1460)
++ |+++|+.+... .+..+..+ ...+.++.+|++........+||||||||++|||||+++|++|+|||||+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEE-----RAEELLELFELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 86 99999965321 11111111 12334444566555556667899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1388 NVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1388 ~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+||+++.+.+.+.|++.. +++|||++||+++.+.+ ||||++|++|++++.|+++++.++
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999998764 47999999999999875 899999999999999999998764
No 303
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-37 Score=349.41 Aligned_cols=209 Identities=24% Similarity=0.409 Sum_probs=178.2
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++||+++|+.. ..|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .+++++|
T Consensus 2 l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 7899999999632 249999999999999999999999999999999999999999999999886654 3678999
Q ss_pred EeCCCccCCc-cHHHhcCcCC-CC---C---hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1304 VPQSPFLFEG-SLRDNLDPFH-MN---D---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~~-~~---s---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
+||+|.+|++ |+++|+.... .. . ++++.++++. +|++..+......||+|||||++||||+++
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~G~~qrv~laral~~ 146 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQ---------MGIEDLLARLPGQLSGGQRQRVALARCLVR 146 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHH---------cCcHHHHhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999986 9999997421 11 1 1223334444 455555555566899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
+|+++||||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 147 ~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~~ 221 (232)
T PRK10771 147 EQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSGK 221 (232)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCh
Confidence 9999999999999999999999999987643 7899999999999876 7999999999999999999998654
No 304
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=357.18 Aligned_cols=220 Identities=24% Similarity=0.308 Sum_probs=184.7
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCC--------CceEEECCEeCCCCChH
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC--------GGQILVDGLNIINTPVR 1295 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~--------~G~I~IDG~di~~i~~~ 1295 (1460)
++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRH--RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECC--EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 789999999964 36999999999999999999999999999999999999998 99999999999888888
Q ss_pred HHhcccEEEeCCCc-cCCccHHHhcCcCCC-C-ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000497 1296 DLRGRFAVVPQSPF-LFEGSLRDNLDPFHM-N-DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1372 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~-lf~gTIR~NLdp~~~-~-sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1372 (1460)
.+|+.++++||++. +|+.|+++|+..... . ........-......+.++.+|+++..+.....||||||||++||||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~lara 159 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDVTTLSGGELARVQFARV 159 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHH
Confidence 88889999999986 578899999965321 0 00000000001112344455577777777778999999999999999
Q ss_pred Hc---------cCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcCh
Q 000497 1373 LL---------KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1440 (1460)
Q Consensus 1373 LL---------r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1440 (1460)
|+ .+|++|||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|++|++++.|++
T Consensus 160 l~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~g~~ 239 (272)
T PRK13547 160 LAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAHGAP 239 (272)
T ss_pred HhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEecCH
Confidence 99 59999999999999999999999999987643 7899999999999864 899999999999999999
Q ss_pred hHHhc
Q 000497 1441 QTLLQ 1445 (1460)
Q Consensus 1441 ~eLl~ 1445 (1460)
+++++
T Consensus 240 ~~~~~ 244 (272)
T PRK13547 240 ADVLT 244 (272)
T ss_pred HHHcC
Confidence 99875
No 305
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.1e-37 Score=337.28 Aligned_cols=195 Identities=28% Similarity=0.369 Sum_probs=159.5
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|++-.|...... ..+|+|+||+|++||+++|+|||||||||||+.|.|...|++|.|.++|
T Consensus 2 i~~~~v~k~y~~~~~~--~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~ 79 (226)
T COG1136 2 IELKNVSKIYGLGGEK--VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAK 79 (226)
T ss_pred cEEeeeEEEeccCCcc--eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHH
Confidence 3466666666543221 3569999999999999999999999999999999999999999999987
Q ss_pred ----cEEEEcCCCCCCCc-cHHHHHccC----CCCC---hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHH
Q 000497 674 ----SIAYVPQVPWILSG-TIRDNILFG----KNYD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 741 (1460)
Q Consensus 674 ----~i~y~~Q~p~l~~~-ti~~nI~~g----~~~~---~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkq 741 (1460)
.|||++|+..|.+. |++|||.+. .... .++..+.++..+|.+... ......|||||||
T Consensus 80 ~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQ 149 (226)
T COG1136 80 LRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQ 149 (226)
T ss_pred HHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHH
Confidence 59999999987755 999999853 2221 345556666666664433 2345599999999
Q ss_pred HHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000497 742 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 813 (1460)
Q Consensus 742 Rv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 813 (1460)
|||||||++.+|++++.||||.+||.++++.+++.+..-...+|+|+|+|||+......|||++.|+||++.
T Consensus 150 RVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 150 RVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 999999999999999999999999999999999863322134578999999999999999999999999954
No 306
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-37 Score=328.37 Aligned_cols=220 Identities=27% Similarity=0.427 Sum_probs=187.1
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHH-Hhccc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1301 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1301 (1460)
-++++|++..|.+ -.+|+||||++++||.++++||||+||||++++|+|+.++.+|+|.++|.||...+++. .|..|
T Consensus 3 mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 3789999999975 46999999999999999999999999999999999999999999999999999998875 46779
Q ss_pred EEEeCCCccCCc-cHHHhcCcCCCC-ChHHHHHHHHHhcHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFHMN-DDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~~~-sd~ei~~aL~~~~l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
++|||..-+|+. ||.|||..+... .+++-++. .+++..+-+ -|....+..+.+|||||+|-++|||||..+||
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----DLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccccccccc----cHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCC
Confidence 999999999986 999999754221 11111110 022222222 56666777788999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCC
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1448 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1448 (1460)
+|+|||||.+|-+.--+.|.++|++..+ +-||+.|-++.....+ +||.+||++|+|+..|+++||.+++.
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~~ 229 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADPD 229 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCHH
Confidence 9999999999999999999999988764 5699999999998764 79999999999999999999998764
No 307
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-38 Score=326.99 Aligned_cols=205 Identities=25% Similarity=0.341 Sum_probs=173.4
Q ss_pred CceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC-----eEEEEeC-----
Q 000497 604 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH-----GSIHASG----- 673 (1460)
Q Consensus 604 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~-----G~i~~~~----- 673 (1460)
...++++|.++.|.. +.+|+|||++|++++++|++|||||||||||+++.+..+..+ |+|.++|
T Consensus 5 ~~~~~~~~l~~yYg~------~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~ 78 (253)
T COG1117 5 IPAIEVRDLNLYYGD------KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYD 78 (253)
T ss_pred cceeEecceeEEECc------hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccC
Confidence 356888999998863 335999999999999999999999999999999998887765 8998876
Q ss_pred ----------cEEEEcCCCCCCCccHHHHHccCCCC---C----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000497 674 ----------SIAYVPQVPWILSGTIRDNILFGKNY---D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 736 (1460)
Q Consensus 674 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~~---~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LS 736 (1460)
+||.|+|.|.-|..||.|||.+|... . ++..++.++.++|.+... ..+.+.+..||
T Consensus 79 ~~~d~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVK-------DrL~~sa~~LS 151 (253)
T COG1117 79 PKVDVVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVK-------DRLHKSALGLS 151 (253)
T ss_pred CCCCHHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhH-------HHhhCCccCCC
Confidence 59999999999999999999998532 1 244666777777766554 23567788999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEe
Q 000497 737 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 815 (1460)
Q Consensus 737 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 815 (1460)
|||+||++||||+.-+|+|+|||||||||||.+..+|-+. +.. +.++-|+|+|||+++.... +|+...+-+|+++|.
T Consensus 152 GGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeL-i~e-Lk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~ 229 (253)
T COG1117 152 GGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEEL-ITE-LKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEF 229 (253)
T ss_pred hhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHH-HHH-HHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEE
Confidence 9999999999999999999999999999999988887665 333 5556699999999998765 899999999999999
Q ss_pred cCHHHHHh
Q 000497 816 GSSADLAV 823 (1460)
Q Consensus 816 g~~~~l~~ 823 (1460)
|+.+++-.
T Consensus 230 g~T~~iF~ 237 (253)
T COG1117 230 GPTDKIFT 237 (253)
T ss_pred cCHHhhhc
Confidence 99888743
No 308
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.6e-37 Score=353.24 Aligned_cols=215 Identities=20% Similarity=0.286 Sum_probs=177.4
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccC--CCCCceEEECCEeCCCCChHHH-hcc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDL-RGR 1300 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~l-R~~ 1300 (1460)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+.... |..
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 578999999963 46999999999999999999999999999999999994 7999999999999988877654 456
Q ss_pred cEEEeCCCccCCc-cHHHhcCcCCC----------CChHHHHHHHHHhcHHHHHHhCCCchh-hhcCCC-CCChhHHHHH
Q 000497 1301 FAVVPQSPFLFEG-SLRDNLDPFHM----------NDDLKIWSVLEKCHVKEEVEAVGLETF-VKESGI-SFSVGQRQLI 1367 (1460)
Q Consensus 1301 i~iVpQdp~lf~g-TIR~NLdp~~~----------~sd~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~-~LSgGQrQrl 1367 (1460)
++++||+|.+|++ |+++|+..... .+..+.. ..+.+.++.+|++.. ...... .||+|||||+
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl 153 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFL-----KLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRN 153 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHH-----HHHHHHHHHcCCchhhcccccccCcCHHHHHHH
Confidence 9999999999987 89999853210 0111111 122344445577643 333333 5999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh--cCEEEEEeCCeEEEEcChhHHh
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN--MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~--~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
+|||||+++|++|||||||++||.++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 154 EILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVELAK 233 (243)
T ss_pred HHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHHhc
Confidence 99999999999999999999999999999999998764 47899999999999986 7999999999999999998654
Q ss_pred c
Q 000497 1445 Q 1445 (1460)
Q Consensus 1445 ~ 1445 (1460)
.
T Consensus 234 ~ 234 (243)
T TIGR01978 234 E 234 (243)
T ss_pred c
Confidence 3
No 309
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=3.8e-37 Score=351.75 Aligned_cols=220 Identities=25% Similarity=0.421 Sum_probs=181.3
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC----CCceEEECCEeCCCCChHHHh
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI----CGGQILVDGLNIINTPVRDLR 1298 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~----~~G~I~IDG~di~~i~~~~lR 1298 (1460)
.++++|++++| + .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.+++. .+..+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~--~~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAP--CALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccc--ccccc
Confidence 58999999999 2 3699999999999999999999999999999999999999 99999999999863 22234
Q ss_pred cccEEEeCCCc-cCC--ccHHHhcCc----CC-CCChHHHHHHHHHhcHHHHHHhCCCch---hhhcCCCCCChhHHHHH
Q 000497 1299 GRFAVVPQSPF-LFE--GSLRDNLDP----FH-MNDDLKIWSVLEKCHVKEEVEAVGLET---FVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1299 ~~i~iVpQdp~-lf~--gTIR~NLdp----~~-~~sd~ei~~aL~~~~l~~~i~~lgLdt---~v~e~G~~LSgGQrQrl 1367 (1460)
+.++|+||+|. .|. .|+.+|+.. .+ ...+++++++++.+ |++. .++.....||+|||||+
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAV---------GLENAARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHc---------CCCChhhhhhcCCcccCHHHHHHH
Confidence 67999999985 343 477777532 11 12233444444444 4443 45667778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHh
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
+|||||+++|+||||||||++||.++.+.+.+.|++..+ ++|||+|||+++.+.+ ||||++|++|++++.|+++++.
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999987643 7899999999999865 8999999999999999999998
Q ss_pred ccCCc-HHHHHHH
Q 000497 1445 QDECS-VFSSFVR 1456 (1460)
Q Consensus 1445 ~~~~~-~f~~l~~ 1456 (1460)
+++.. .++.++.
T Consensus 230 ~~~~~~~~~~~~~ 242 (254)
T PRK10418 230 NAPKHAVTRSLVS 242 (254)
T ss_pred hCCCCHHHHHHHH
Confidence 76544 4555554
No 310
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3e-37 Score=349.39 Aligned_cols=212 Identities=29% Similarity=0.449 Sum_probs=185.8
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|+++.|.... +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 i~~~~l~~~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (237)
T cd03252 1 ITFEHVRFRYKPDG----PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRR 76 (237)
T ss_pred CEEEEEEEecCCCC----ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhh
Confidence 36789999985321 2359999999999999999999999999999999999999999999876
Q ss_pred cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccC
Q 000497 674 SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 752 (1460)
Q Consensus 674 ~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~ 752 (1460)
.++|++|++++++.|++||+.++.. ...++..+.++..++..-++.+|.|.++..+..+.+|||||||||+||||++.+
T Consensus 77 ~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~ 156 (237)
T cd03252 77 QVGVVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHN 156 (237)
T ss_pred cEEEEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhC
Confidence 3899999999999999999998653 344455566677778878888998988888999999999999999999999999
Q ss_pred CCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhc
Q 000497 753 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 824 (1460)
Q Consensus 753 ~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~ 824 (1460)
|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 157 p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (237)
T cd03252 157 PRILIFDEATSALDYESEHAIMRN-MHD-ICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE 226 (237)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc
Confidence 999999999999999999988876 333 3457899999999999988999999999999999999887654
No 311
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=3e-37 Score=354.80 Aligned_cols=231 Identities=22% Similarity=0.331 Sum_probs=189.5
Q ss_pred cEEEEEEEEEecCC-------CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh-
Q 000497 1223 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV- 1294 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~- 1294 (1460)
.|+++||+++|+.+ ..++++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38999999999731 3579999999999999999999999999999999999999999999999999988765
Q ss_pred --HHHhcccEEEeCCCc--cC-CccHHHhcCcC-CCCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHH
Q 000497 1295 --RDLRGRFAVVPQSPF--LF-EGSLRDNLDPF-HMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLI 1367 (1460)
Q Consensus 1295 --~~lR~~i~iVpQdp~--lf-~gTIR~NLdp~-~~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl 1367 (1460)
..+|++++++||++. ++ ..|+++|+... ....+ +...-....+.+.++.+|+++ ..+.....||+|||||+
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl 160 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLS--LDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRV 160 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhcc--CCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHH
Confidence 356889999999983 44 35999997431 10000 001111223455666668874 56777789999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHh
Q 000497 1368 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1368 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
+|||||+++|+||||||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 161 CLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDKL 240 (268)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhcc
Confidence 999999999999999999999999999999999987643 7899999999999985 8999999999999999999998
Q ss_pred ccCCcHHHHHHH
Q 000497 1445 QDECSVFSSFVR 1456 (1460)
Q Consensus 1445 ~~~~~~f~~l~~ 1456 (1460)
.. ++.|..-+.
T Consensus 241 ~~-~~~~~~~~~ 251 (268)
T PRK10419 241 TF-SSPAGRVLQ 251 (268)
T ss_pred CC-CCHHHHHHH
Confidence 64 445544443
No 312
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-38 Score=322.85 Aligned_cols=217 Identities=26% Similarity=0.417 Sum_probs=187.7
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|.|+|||.|+..-| ...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p-~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDP-SFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccCh-HHHhhhcce
Confidence 678999999976 334899999999999999999999999999999999999999999999999997754 667999999
Q ss_pred EeCCCccCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1304 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
++-+.-++.- |.||||.+|+. .++.++. +...+..+.++++..++.+-.+||-|+|||++|||||.++|+|
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~k-----ari~~l~k~l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i 154 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIK-----ARIAELSKRLQLLEYLDRRVGEFSTGMKQKVAIARALVHDPSI 154 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHH-----HHHHHHHHHhChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCe
Confidence 9977667754 99999988753 2333332 2334444555666666666668999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcC-CcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1380 LCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~~-~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
++||||||+||.-+.+.+++.|++... +++||+-+|-++.++ -||||+++.+|+++..|+++++.++.
T Consensus 155 ~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~ 224 (245)
T COG4555 155 LVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDART 224 (245)
T ss_pred EEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHH
Confidence 999999999999999999999987754 999999999999998 59999999999999999999998754
No 313
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.7e-37 Score=348.61 Aligned_cols=212 Identities=27% Similarity=0.371 Sum_probs=173.4
Q ss_pred EEEEEEEEEecCC--CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC---CCCceEEECCEeCCCCChHHHh
Q 000497 1224 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLR 1298 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR 1298 (1460)
++|+||+++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999754 3679999999999999999999999999999999999999 99999999999885 34678
Q ss_pred cccEEEeCCCccCCc-cHHHhcCcCCC-CChHHHHHHHHHhcHHH-HHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1299 GRFAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKE-EVEAVGLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1299 ~~i~iVpQdp~lf~g-TIR~NLdp~~~-~sd~ei~~aL~~~~l~~-~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
++++++||++.+|++ |+++|+.+... .......+..+.....+ .++.++++........+||+|||||++||||+++
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 160 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVKGISGGERRRVSIAVQLLW 160 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccccCcCHHHHHHHHHHHHHHh
Confidence 899999999999987 99999974311 00000011111111222 3444466655556667899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccCh-hhH-hhcCEEEEEeCCeEEEEc
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRI-STV-LNMDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl-~ti-~~~DrIlVl~~G~IvE~G 1438 (1460)
+|+|+||||||++||+.+.+.+.+.|++.. +++|+|++||++ +.+ ..||+|++|++|++++.|
T Consensus 161 ~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 161 DPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999998764 478999999998 455 458999999999999876
No 314
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-37 Score=352.22 Aligned_cols=205 Identities=28% Similarity=0.363 Sum_probs=173.0
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +.+++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999964 4699999999999999999999999999999999999999999999999998642 346899
Q ss_pred EeCCCccCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1304 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1304 VpQdp~lf~-gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+||++.+|+ .|+++|+.... .....+.. ....+.++.+|++........+||||||||++||||++++|++
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrl~laral~~~p~l 149 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRL-----EIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQL 149 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999887 59999996431 11221111 1233444555676656666778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEe--CCeEEEEcCh
Q 000497 1380 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILD--HGHLVEQGNP 1440 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~--~G~IvE~G~p 1440 (1460)
|||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|+ +|++++.+++
T Consensus 150 llLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 150 LLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999998763 38999999999999865 79999998 5999998764
No 315
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=4.6e-37 Score=351.28 Aligned_cols=226 Identities=22% Similarity=0.365 Sum_probs=187.0
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEe-----CCCCChHH-
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN-----IINTPVRD- 1296 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~d-----i~~i~~~~- 1296 (1460)
.|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +...+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGG--GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCC--ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 4899999999964 358999999999999999999999999999999999999999999999988 77766543
Q ss_pred ---HhcccEEEeCCCc--c-CCccHHHhcCc----CCCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHH
Q 000497 1297 ---LRGRFAVVPQSPF--L-FEGSLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQ 1365 (1460)
Q Consensus 1297 ---lR~~i~iVpQdp~--l-f~gTIR~NLdp----~~~~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQ 1365 (1460)
+++.++++||+|. + +..|+.+|+.. .......+. ...+.+.++.+|++ +..+....+|||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~q 155 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----RAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQ 155 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHcCCChhhhhcCchhcCHHHHH
Confidence 3467999999985 2 33588888732 111111111 12344566667886 5677788899999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhH
Q 000497 1366 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1442 (1460)
Q Consensus 1366 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~e 1442 (1460)
|++|||||+++|++|+|||||++||+.+.+.+.+.|++.. .+.|+|+|+|+++.+.. ||++++|++|++++.|++++
T Consensus 156 rv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~~~ 235 (253)
T TIGR02323 156 RLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLTDQ 235 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999998764 37899999999999985 89999999999999999999
Q ss_pred HhccCCcHHHHHH
Q 000497 1443 LLQDECSVFSSFV 1455 (1460)
Q Consensus 1443 Ll~~~~~~f~~l~ 1455 (1460)
+..++...|.+++
T Consensus 236 ~~~~~~~~~~~~~ 248 (253)
T TIGR02323 236 VLDDPQHPYTQLL 248 (253)
T ss_pred HhcCCCCHHHHHH
Confidence 9876655555544
No 316
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-37 Score=366.14 Aligned_cols=212 Identities=24% Similarity=0.368 Sum_probs=180.9
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCC----ChHHHhc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRDLRG 1299 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~~lR~ 1299 (1460)
|++ |++++|+.. .+ |+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +....|+
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 999999642 23 99999999999999999999999999999999999999999999998653 2445688
Q ss_pred ccEEEeCCCccCCc-cHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1300 RFAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1300 ~i~iVpQdp~lf~g-TIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
+++|+||++.+|+. |+++|+.+... ..++++.+ .++.+|++........+||||||||++|||||+++|
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~---------~l~~~gl~~~~~~~~~~LSgGq~qRvalaraL~~~p 147 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDK---------IVALLGIEPLLDRYPGSLSGGEKQRVAIGRALLTAP 147 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHH---------HHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999999975 99999975422 12233333 344446666666677789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCc
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1449 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~ 1449 (1460)
++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++..
T Consensus 148 ~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~~ 222 (352)
T PRK11144 148 ELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSAM 222 (352)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcch
Confidence 99999999999999999999999987653 7899999999998866 899999999999999999999988753
No 317
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3.7e-37 Score=342.59 Aligned_cols=201 Identities=22% Similarity=0.378 Sum_probs=170.7
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|+. .++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+.+.+ ..|+++++
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999962 578999999999999999999999999999999999999999999999987644 46788999
Q ss_pred EeCCCccCCc-cHHHhcCcC-CC-C-----ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1304 VPQSPFLFEG-SLRDNLDPF-HM-N-----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~-~~-~-----sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
+||+|.+|.+ |+++|+... .. . .++++.++++. +|++........+||+|||||++||||+++
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~G~~qrl~laral~~ 145 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQ---------VGIADYLDRLPEQLSGGQRQRVALARCLVR 145 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHH---------cCcHHHhhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999875 999998632 11 1 11233334444 455544555566899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcC
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1439 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~ 1439 (1460)
+|+|++|||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|.
T Consensus 146 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 146 PNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999998764 37899999999999875 89999999999999874
No 318
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=9.2e-38 Score=359.18 Aligned_cols=203 Identities=28% Similarity=0.399 Sum_probs=174.6
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|++-+|.. ..+++|+||+|++||++++.|||||||||+|++|+|+..|++|+|.++|
T Consensus 4 ~~l~i~~v~k~yg~------~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR 77 (352)
T COG3842 4 PALEIRNVSKSFGD------FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKR 77 (352)
T ss_pred ceEEEEeeeeecCC------eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhc
Confidence 46899999988862 2359999999999999999999999999999999999999999999987
Q ss_pred cEEEEcCCCCCCCc-cHHHHHccCCCC----C-h---HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHH
Q 000497 674 SIAYVPQVPWILSG-TIRDNILFGKNY----D-P---QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 744 (1460)
Q Consensus 674 ~i~y~~Q~p~l~~~-ti~~nI~~g~~~----~-~---~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~ 744 (1460)
.|++|+|+.-||.. ||+|||.||... . + +++.++++..+|..--. .+...||||||||||
T Consensus 78 ~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~-----------R~p~qLSGGQqQRVA 146 (352)
T COG3842 78 PIGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFAD-----------RKPHQLSGGQQQRVA 146 (352)
T ss_pred ccceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhh-----------hChhhhChHHHHHHH
Confidence 59999999999865 999999999652 2 2 36777777777766433 455699999999999
Q ss_pred HHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcch-hhcCCEEEEEeCCeEEEecCHHHHHh
Q 000497 745 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 745 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~-l~~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
|||||..+|+++|||||+||||.+.++++-..+.......|.|.|+|||+.+. +..+|+|.+|++|+|...|+++|+..
T Consensus 147 LARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~ 226 (352)
T COG3842 147 LARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYE 226 (352)
T ss_pred HHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhh
Confidence 99999999999999999999999998887766432223347899999999876 66799999999999999999999965
Q ss_pred c
Q 000497 824 S 824 (1460)
Q Consensus 824 ~ 824 (1460)
.
T Consensus 227 ~ 227 (352)
T COG3842 227 R 227 (352)
T ss_pred C
Confidence 4
No 319
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-37 Score=340.27 Aligned_cols=200 Identities=30% Similarity=0.398 Sum_probs=167.6
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
|.+++.+-.|.. ..+++|||++|+.||++++.|||||||||||++|+|...|++|.|.++|
T Consensus 3 i~i~~~~~~~~~------~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~ 76 (345)
T COG1118 3 IRINNVKKRFGA------FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRD 76 (345)
T ss_pred eeehhhhhhccc------ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhh
Confidence 556666666653 2348999999999999999999999999999999999999999999987
Q ss_pred -cEEEEcCCCCCCC-ccHHHHHccCCCC---------ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 -SIAYVPQVPWILS-GTIRDNILFGKNY---------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 -~i~y~~Q~p~l~~-~ti~~nI~~g~~~---------~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
+||||.|+.-||. .||.|||.||.+. ...+..+.++.|.|+.--+.. ...||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ry-----------P~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRY-----------PAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcC-----------chhcChHHHHH
Confidence 5999999999885 5999999999632 234666778888887543333 45899999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccC-CceEEEEcCCcchh-hcCCEEEEEeCCeEEEecCHHH
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML-QKTRILCTHNVQAI-SAADMVVVMDKGQVKWIGSSAD 820 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~-~~t~ilvth~~~~l-~~ad~i~~l~~G~i~~~g~~~~ 820 (1460)
||||||+..+|++|||||||+|||+++.+.+-+.+. .-..+ +.|+++|||+.++. ..||+|++|++|+|...|+++|
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr-~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~e 224 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLR-KLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDE 224 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHH-HHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHH
Confidence 999999999999999999999999999887765532 21222 67999999999885 4599999999999999999999
Q ss_pred HHhc
Q 000497 821 LAVS 824 (1460)
Q Consensus 821 l~~~ 824 (1460)
+...
T Consensus 225 v~~~ 228 (345)
T COG1118 225 VYDH 228 (345)
T ss_pred HhcC
Confidence 8654
No 320
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=3.9e-37 Score=366.54 Aligned_cols=215 Identities=23% Similarity=0.365 Sum_probs=182.1
Q ss_pred EEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCC----hHHHhcccEE
Q 000497 1228 NVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP----VRDLRGRFAV 1303 (1460)
Q Consensus 1228 nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~----~~~lR~~i~i 1303 (1460)
|++++|+.. .+ |+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+ ....|+++++
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 899999642 34 999999999999999999999999999999999999999999999986542 3456889999
Q ss_pred EeCCCccCCc-cHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000497 1304 VPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1381 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1381 (1460)
+||++.+|++ |+++|+.+... ....+. +....+.++.+|++...+....+||||||||++|||||+++|++||
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~-----~~~~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~lll 154 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSER-----RISFERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLLL 154 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHH-----HHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999986 99999975322 111111 1123344555577777777778999999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHH
Q 000497 1382 LDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1451 (1460)
Q Consensus 1382 LDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1451 (1460)
|||||++||..+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++...|
T Consensus 155 LDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 227 (354)
T TIGR02142 155 MDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPW 227 (354)
T ss_pred EcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCccc
Confidence 9999999999999999999987643 7899999999999876 89999999999999999999998776544
No 321
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2.4e-37 Score=345.80 Aligned_cols=206 Identities=25% Similarity=0.347 Sum_probs=176.3
Q ss_pred EEEEEEEEEecCCC--CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HHh
Q 000497 1224 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1298 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR 1298 (1460)
++++|++++|+++. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996432 4699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cccEEEeCCCccCC-ccHHHhcCcCCC----CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000497 1299 GRFAVVPQSPFLFE-GSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1299 ~~i~iVpQdp~lf~-gTIR~NLdp~~~----~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1373 (1460)
+.++++||+|.+|. .|+.+|+.+... .+.++..+ ...+.++.+|++........+||+|||||++||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~lS~G~~qrv~laral 156 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARE-----RARAMLEAVGLGDHLDYYPHNLSGGQKQRVAIARAL 156 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHH
Confidence 89999999999987 699999975321 12222211 223455556777767777789999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCeE
Q 000497 1374 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHL 1434 (1460)
Q Consensus 1374 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G~I 1434 (1460)
+++|++++|||||++||.++.+.+.+.|++.. +++|+|+|+|+++....||+|++|++|++
T Consensus 157 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 157 VHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 99999999999999999999999999998765 37999999999998777999999999986
No 322
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=5.6e-37 Score=352.11 Aligned_cols=224 Identities=25% Similarity=0.403 Sum_probs=184.9
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCC---CceEEECCEeCCCC-----Ch
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC---GGQILVDGLNIINT-----PV 1294 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~---~G~I~IDG~di~~i-----~~ 1294 (1460)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +.
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 5899999999963 46999999999999999999999999999999999999886 49999999998654 24
Q ss_pred HHHhcccEEEeCCCccCCc-cHHHhcCcCCCC-----------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChh
Q 000497 1295 RDLRGRFAVVPQSPFLFEG-SLRDNLDPFHMN-----------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVG 1362 (1460)
Q Consensus 1295 ~~lR~~i~iVpQdp~lf~g-TIR~NLdp~~~~-----------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgG 1362 (1460)
..+|++++|+||++.+|++ |+++|+...... .+++ .+....+.++.+|++........+||+|
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~LS~G 156 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTRE-----QKQRALQALTRVGMVHFAHQRVSTLSGG 156 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHH-----HHHHHHHHHHHcCCHHHHhCCccccCHH
Confidence 5678899999999998875 999999643110 0111 0112334445557765566777789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcC
Q 000497 1363 QRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGN 1439 (1460)
Q Consensus 1363 QrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~ 1439 (1460)
||||++||||++.+|++|||||||++||.++.+.+.+.|++.. +++|||++||+++.+. .||+|++|++|++++.|+
T Consensus 157 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~ 236 (262)
T PRK09984 157 QQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGS 236 (262)
T ss_pred HHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998864 3799999999999875 489999999999999999
Q ss_pred hhHHhccCCcHHHHHHH
Q 000497 1440 PQTLLQDECSVFSSFVR 1456 (1460)
Q Consensus 1440 p~eLl~~~~~~f~~l~~ 1456 (1460)
++++ .+ ....+++.
T Consensus 237 ~~~~-~~--~~~~~~~~ 250 (262)
T PRK09984 237 SQQF-DN--ERFDHLYR 250 (262)
T ss_pred HHHh-cc--HHHHHHHh
Confidence 9997 32 24555544
No 323
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-37 Score=345.10 Aligned_cols=211 Identities=28% Similarity=0.440 Sum_probs=188.2
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|... +++++|+||++++|++++|+||||||||||+++|+|+.+|.+|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~-----~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 76 (229)
T cd03254 2 EIEFENVNFSYDEK-----KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLR 76 (229)
T ss_pred eEEEEEEEEecCCC-----CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHh
Confidence 47899999998531 2359999999999999999999999999999999999999999999875
Q ss_pred -cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHcc
Q 000497 674 -SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 751 (1460)
Q Consensus 674 -~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~ 751 (1460)
.++|++|+|+++++|++||+.++.+ ...++..+.++.++++..++.+|.|.++.++....+|||||||||+||||+++
T Consensus 77 ~~i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~ 156 (229)
T cd03254 77 SMIGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLR 156 (229)
T ss_pred hhEEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 3899999999999999999998754 34566777888889988899999999999999999999999999999999999
Q ss_pred CCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHh
Q 000497 752 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 752 ~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.++.||++++|++|++.+.|+.+++..
T Consensus 157 ~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 157 DPKILILDEATSNIDTETEKLIQEA-LEK-LMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 9999999999999999999988776 433 345789999999999998899999999999999999887754
No 324
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.2e-38 Score=323.25 Aligned_cols=225 Identities=24% Similarity=0.389 Sum_probs=195.6
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHH-Hhcc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGR 1300 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~ 1300 (1460)
+.+..+|+..+|.. .+|+++|||+|++||.||+.|||||||||.+.++.|++.|++|+|.+||.||+.+|.+. -|-.
T Consensus 3 ~~L~a~~l~K~y~k--r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKK--RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCC--eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 45788999999964 47999999999999999999999999999999999999999999999999999999875 3556
Q ss_pred cEEEeCCCccCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1301 FAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1301 i~iVpQdp~lf~g-TIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
|+|.||||.+|.+ ||+|||...-+..+.+.+.+-++..+.+.++.+.+...-...|.+||||||+|+-|||||..+|+.
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARaLa~~P~f 160 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKAYSLSGGERRRVEIARALAANPKF 160 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcccccccchHHHHHHHHHHhcCCCE
Confidence 9999999999988 999998654333222233344555566667777777777788889999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChh-hHhhcCEEEEEeCCeEEEEcChhHHhccCC
Q 000497 1380 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIS-TVLNMDEILILDHGHLVEQGNPQTLLQDEC 1448 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~-ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~ 1448 (1460)
++||||.|++|+-+-..||+.|+... +|--|++.-|... |+.-|||.+++.+|+|...|+|+|+.+|+.
T Consensus 161 iLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~~ 231 (243)
T COG1137 161 ILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNED 231 (243)
T ss_pred EEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcChh
Confidence 99999999999999999999998764 4778999999976 667799999999999999999999999864
No 325
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.1e-36 Score=348.51 Aligned_cols=214 Identities=27% Similarity=0.359 Sum_probs=191.3
Q ss_pred CceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC----------
Q 000497 604 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 673 (1460)
Q Consensus 604 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 673 (1460)
...++++|+++.|+.. . ..+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 17 ~~~i~~~~l~~~~~~~-~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~ 92 (257)
T cd03288 17 GGEIKIHDLCVRYENN-L---KPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHT 92 (257)
T ss_pred CceEEEEEEEEEeCCC-C---CcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHH
Confidence 4679999999999642 1 2359999999999999999999999999999999999999999999875
Q ss_pred ---cEEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHc
Q 000497 674 ---SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 750 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly 750 (1460)
.++||+|+|+++++|++||+........+.+.++++..++...++.+|.|.++.+++.+.+||||||||++||||++
T Consensus 93 ~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 93 LRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred HhhhEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 48999999999999999999765444556677888888999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHh
Q 000497 751 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 751 ~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
++|++++|||||++||+++.+.+++. +.. +.++.|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~-l~~-~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 243 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKV-VMT-AFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLA 243 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHH-HHH-hcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999998877765 433 345789999999999998999999999999999999988764
No 326
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.1e-36 Score=341.07 Aligned_cols=206 Identities=32% Similarity=0.443 Sum_probs=185.3
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|+... +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 77 (221)
T cd03244 2 DIEFKNVSLRYRPNL----PPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLR 77 (221)
T ss_pred cEEEEEEEEecCCCC----cccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHh
Confidence 368899999996421 2469999999999999999999999999999999999999999998875
Q ss_pred -cEEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccC
Q 000497 674 -SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 752 (1460)
Q Consensus 674 -~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~ 752 (1460)
.++|++|+|.++++|++|||.+....+.++..+.++..++...+..+|.|.++..++.+.+||||||||++||||++.+
T Consensus 78 ~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~ 157 (221)
T cd03244 78 SRISIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRK 157 (221)
T ss_pred hhEEEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999987666667777888889999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecC
Q 000497 753 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 817 (1460)
Q Consensus 753 ~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 817 (1460)
|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.+..||++++|++|++++.|+
T Consensus 158 p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 158 SKILVLDEATASVDPETDALIQKT-IRE-AFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 999999999999999998888776 433 345689999999999998999999999999988765
No 327
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=343.81 Aligned_cols=212 Identities=32% Similarity=0.487 Sum_probs=187.5
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|+++.|.... .++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 1 i~~~~l~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (234)
T cd03251 1 VEFKNVTFRYPGDG----PPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRR 76 (234)
T ss_pred CEEEEEEEEeCCCC----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHh
Confidence 35788899885321 2359999999999999999999999999999999999999999999876
Q ss_pred cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccC
Q 000497 674 SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 752 (1460)
Q Consensus 674 ~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~ 752 (1460)
.++|++|+|++++.|++||+.++.. .+++.+.+.++.+.+.+.++.+|.|.++..+....+||||||||++||||++.+
T Consensus 77 ~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 156 (234)
T cd03251 77 QIGLVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKD 156 (234)
T ss_pred hEEEeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcC
Confidence 3899999999999999999998753 455667777888888888999998988889999999999999999999999999
Q ss_pred CCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhc
Q 000497 753 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 824 (1460)
Q Consensus 753 ~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~ 824 (1460)
|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.++.||++++|++|++++.|+.+++...
T Consensus 157 p~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (234)
T cd03251 157 PPILILDEATSALDTESERLVQAA-LER-LMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ 226 (234)
T ss_pred CCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc
Confidence 999999999999999999988776 433 3457899999999999988999999999999999999887644
No 328
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-37 Score=327.74 Aligned_cols=171 Identities=44% Similarity=0.760 Sum_probs=161.6
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|+...+++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 47899999997543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000497 1304 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1383 (1460)
Q Consensus 1304 VpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1383 (1460)
+||+|.+|+.|++||+ ||+|||||++||||++++|++|+||
T Consensus 81 ~~~~~~~~~~t~~e~l---------------------------------------LS~G~~~rl~la~al~~~p~llllD 121 (171)
T cd03228 81 VPQDPFLFSGTIRENI---------------------------------------LSGGQRQRIAIARALLRDPPILILD 121 (171)
T ss_pred EcCCchhccchHHHHh---------------------------------------hCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999997 9999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCe
Q 000497 1384 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGH 1433 (1460)
Q Consensus 1384 EaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~ 1433 (1460)
|||++||.++.+.+.+.|++..+++|+|++||+++.+..||++++|++|+
T Consensus 122 EP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 122 EATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred CCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 99999999999999999988767899999999999998899999999985
No 329
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-37 Score=340.36 Aligned_cols=203 Identities=30% Similarity=0.409 Sum_probs=175.9
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|.+|.|+.+ .++|+|+|+++++|+.++|+|+||||||||++.+.|.++|++|.|.++|
T Consensus 3 ~i~~~~l~~~y~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~ 77 (235)
T COG1122 3 MIEAENLSFRYPGR-----KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLEL 77 (235)
T ss_pred eEEEEEEEEEcCCC-----ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHh
Confidence 47889999999754 3459999999999999999999999999999999999999999998866
Q ss_pred --cEEEEcCCC--CCCCccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 --SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 --~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
++|||.|+| .+|..||.|.|.||.. .++ ++.+++++.|++.+..+..| .+||||||||
T Consensus 78 ~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqR 146 (235)
T COG1122 78 RQKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQR 146 (235)
T ss_pred hcceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceee
Confidence 499999999 6999999999999853 333 46777888888877654444 4999999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHH
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 821 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 821 (1460)
||||.+|..+|++++||||||+||+...+.+++.+..-....++|+|++||+++.+.. ||++++|++|+++.+|++.++
T Consensus 147 vaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i 226 (235)
T COG1122 147 VAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEI 226 (235)
T ss_pred HHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHH
Confidence 9999999999999999999999999999999886332212336799999999999876 999999999999999999887
Q ss_pred Hhc
Q 000497 822 AVS 824 (1460)
Q Consensus 822 ~~~ 824 (1460)
.+.
T Consensus 227 ~~~ 229 (235)
T COG1122 227 FND 229 (235)
T ss_pred hhh
Confidence 643
No 330
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.1e-36 Score=341.52 Aligned_cols=204 Identities=31% Similarity=0.407 Sum_probs=173.9
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ++++++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 478999999963 46999999999999999999999999999999999999999999999999876422 357999
Q ss_pred EeCCCccCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1304 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1304 VpQdp~lf~-gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+||++.+|. .|+++|+.++. ..+++++.++++.. |++........+||+|||||++||||++++|++
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~~rv~laral~~~p~l 145 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIV---------DLTNTGKKKAKQFSLGMKQRLGIAIALLNHPKL 145 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHc---------CCcHHHhhhHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998886 59999986421 22334444444444 554444555568999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhH
Q 000497 1380 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1442 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~e 1442 (1460)
++|||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||||++|++|++++.|++.+
T Consensus 146 lllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 146 LILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred EEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 99999999999999999999998764 47899999999999865 89999999999999999875
No 331
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-36 Score=342.10 Aligned_cols=209 Identities=31% Similarity=0.482 Sum_probs=185.2
Q ss_pred EEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------c
Q 000497 608 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 674 (1460)
Q Consensus 608 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~ 674 (1460)
+++|+++.|+.. +.+++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++| .
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~ 76 (236)
T cd03253 2 EFENVTFAYDPG-----RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRA 76 (236)
T ss_pred EEEEEEEEeCCC-----CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhh
Confidence 578899988532 2359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCC
Q 000497 675 IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 753 (1460)
Q Consensus 675 i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~ 753 (1460)
++|++|+|++++.|++||+.++.. .+.+...+.++.+++...+..+|.|.++.++.+..+||||||||++||||++++|
T Consensus 77 i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p 156 (236)
T cd03253 77 IGVVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNP 156 (236)
T ss_pred EEEECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 899999999999999999998753 3444566778888898888999999999999999999999999999999999999
Q ss_pred CEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHh
Q 000497 754 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 754 ~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
+++||||||++||+.+.+.+.+. +.. ..+++|+|++||+.+.+..||++++|++|++.+.|+.+++..
T Consensus 157 ~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~ 224 (236)
T cd03253 157 PILLLDEATSALDTHTEREIQAA-LRD-VSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA 224 (236)
T ss_pred CEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999888876 333 334789999999999998899999999999999999887754
No 332
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=1.7e-36 Score=333.37 Aligned_cols=185 Identities=23% Similarity=0.353 Sum_probs=163.8
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhcc--CCCCCceEEECCEeCCCCChHHH-hcc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL--TPICGGQILVDGLNIINTPVRDL-RGR 1300 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl--~~~~~G~I~IDG~di~~i~~~~l-R~~ 1300 (1460)
++++|++++|+. .++++|+||+|++||.+||+|+||||||||+++|.|+ ++|++|+|.+||.++...+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999963 4699999999999999999999999999999999999 58999999999999998876554 566
Q ss_pred cEEEeCCCccCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1301 FAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1301 i~iVpQdp~lf~g-TIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
++|+||+|.+|++ |+++|++ ....+||+|||||++||||++++|+|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l~---------------------------------~~~~~LS~G~~qrv~laral~~~p~i 125 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFLR---------------------------------YVNEGFSGGEKKRNEILQLLLLEPDL 125 (200)
T ss_pred EEEeecChhhccCccHHHHHh---------------------------------hccccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999886 5666550 01136999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh--hcCEEEEEeCCeEEEEcChhHHh
Q 000497 1380 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL--NMDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~--~~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
++|||||++||.++.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.| +.|+.
T Consensus 126 lllDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 126 AILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 99999999999999999999998764 3789999999999998 58999999999999999 55564
No 333
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-36 Score=338.03 Aligned_cols=204 Identities=25% Similarity=0.393 Sum_probs=171.4
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCC----ChHHHhc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRDLRG 1299 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~~lR~ 1299 (1460)
+++ |++++|+.. .+ |+||+|++ |++||+|+||||||||+++|.|+++|++|+|.+||.++... +....|+
T Consensus 2 ~~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 2 LCV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred cee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhh
Confidence 345 899999753 34 99999999 99999999999999999999999999999999999998643 3445788
Q ss_pred ccEEEeCCCccCCc-cHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1300 RFAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1300 ~i~iVpQdp~lf~g-TIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
+++++||++.+|++ |+++|+..... +.+++ .+....+.++.+|++........+||+|||||++||||++++|
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (214)
T cd03297 76 KIGLVFQQYALFPHLNVRENLAFGLKRKRNRE-----DRISVDELLDLLGLDHLLNRYPAQLSGGEKQRVALARALAAQP 150 (214)
T ss_pred cEEEEecCCccCCCCCHHHHHHHHHhhCCHHH-----HHHHHHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999865 99999964321 11111 1122344555567777677778899999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEc
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1438 (1460)
+|+||||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 151 ELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999987643 7899999999999865 8999999999999875
No 334
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-36 Score=326.09 Aligned_cols=170 Identities=32% Similarity=0.562 Sum_probs=157.3
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGK--KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 478999999964 36999999999999999999999999999999999999999999999999998766 677889999
Q ss_pred EeCCCccCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000497 1304 VPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1382 (1460)
Q Consensus 1304 VpQdp~lf~g-TIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1382 (1460)
+||+|.+|.+ |+++|+. ||+|||||++||||++++|+|++|
T Consensus 78 ~~q~~~~~~~~tv~~~~~--------------------------------------LS~G~~qrv~laral~~~p~illl 119 (173)
T cd03230 78 LPEEPSLYENLTVRENLK--------------------------------------LSGGMKQRLALAQALLHDPELLIL 119 (173)
T ss_pred EecCCccccCCcHHHHhh--------------------------------------cCHHHHHHHHHHHHHHcCCCEEEE
Confidence 9999999887 9999973 999999999999999999999999
Q ss_pred eccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeE
Q 000497 1383 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1434 (1460)
Q Consensus 1383 DEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~I 1434 (1460)
||||++||..+.+.+.+.|++.. ++.|+|++||+.+.+.+ ||+|++|++|++
T Consensus 120 DEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 120 DEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 99999999999999999998764 46899999999999884 799999999974
No 335
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-36 Score=334.95 Aligned_cols=224 Identities=27% Similarity=0.456 Sum_probs=180.7
Q ss_pred EEEEEEEEEecCCC--CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC-C----CCceEEECCEeCCCCChHH
Q 000497 1224 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-I----CGGQILVDGLNIINTPVRD 1296 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-~----~~G~I~IDG~di~~i~~~~ 1296 (1460)
++++|++..|.... ..+++||||+|++||.+||||.|||||||+.++++|+++ | .+|+|.+||.|+.+++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 58899999997542 468999999999999999999999999999999999998 3 5799999999999999875
Q ss_pred H---h-cccEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHh-----------cHHHHHHhCCCch---hhhcCCCC
Q 000497 1297 L---R-GRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKC-----------HVKEEVEAVGLET---FVKESGIS 1358 (1460)
Q Consensus 1297 l---R-~~i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~-----------~l~~~i~~lgLdt---~v~e~G~~ 1358 (1460)
+ | +.|++|||||. .-|+|.... .+++.++++.- ...+.++..|++. .+..-...
T Consensus 82 ~~~iRG~~I~mIfQ~p~-------~sLnPv~~I-g~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPM-------TSLNPVMTI-GDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCch-------hhcCChhhH-HHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcc
Confidence 4 3 47999999995 222332111 11222222210 0112223335543 45666778
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEE
Q 000497 1359 FSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLV 1435 (1460)
Q Consensus 1359 LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~Iv 1435 (1460)
||||||||+.||-|++.+|++||-||||++||..+.+.|.+.|++.. .+.|+|+|||++..+.. ||||+||.+|+||
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 99999999999999999999999999999999999999999998765 48999999999998875 8999999999999
Q ss_pred EEcChhHHhccCCcHHHHHH
Q 000497 1436 EQGNPQTLLQDECSVFSSFV 1455 (1460)
Q Consensus 1436 E~G~p~eLl~~~~~~f~~l~ 1455 (1460)
|.|+.+++++++.-.|.+.+
T Consensus 234 E~g~~~~i~~~P~HPYT~~L 253 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGL 253 (316)
T ss_pred EeCCHHHHhcCCCChHHHHH
Confidence 99999999999887776544
No 336
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.5e-36 Score=342.01 Aligned_cols=211 Identities=30% Similarity=0.482 Sum_probs=185.1
Q ss_pred EEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------c
Q 000497 608 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 674 (1460)
Q Consensus 608 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~ 674 (1460)
+++|+++.|+.... .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 2 ~i~~l~~~~~~~~~---~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (238)
T cd03249 2 EFKNVSFRYPSRPD---VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQ 78 (238)
T ss_pred eEEEEEEecCCCCC---ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhh
Confidence 57888998864211 2359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCC
Q 000497 675 IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 753 (1460)
Q Consensus 675 i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~ 753 (1460)
++|++|+|++++.|++||+.++.. ...++..+.++.+++...+..+|.|.++..+....+||||||||++||||++.+|
T Consensus 79 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p 158 (238)
T cd03249 79 IGLVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNP 158 (238)
T ss_pred EEEECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCC
Confidence 999999999998999999998753 3445566677788888888899999888899999999999999999999999999
Q ss_pred CEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHh
Q 000497 754 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 754 ~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
+++||||||++||+...+.+.+. +.. ..+++|+|++||+++.+..||+|++|++|++++.|+.+++..
T Consensus 159 ~llllDEP~~gLD~~~~~~l~~~-l~~-~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (238)
T cd03249 159 KILLLDEATSALDAESEKLVQEA-LDR-AMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMA 226 (238)
T ss_pred CEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhh
Confidence 99999999999999999988876 433 236789999999999998999999999999999998877653
No 337
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-36 Score=327.05 Aligned_cols=172 Identities=33% Similarity=0.510 Sum_probs=159.0
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCC--hHHHhccc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--VRDLRGRF 1301 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~--~~~lR~~i 1301 (1460)
|+++|++++|+. .++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ....|+.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 46999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred EEEeCCCccCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1380 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1380 (1460)
+|+||+|.+|.+ |+++|+... ||+|||||++||||++++|+++
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~------------------------------------lS~G~~qr~~la~al~~~p~ll 122 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG------------------------------------LSGGQQQRVALARALAMDPDVL 122 (178)
T ss_pred EEEecCCccCCCCCHHHheeec------------------------------------CCHHHHHHHHHHHHHHCCCCEE
Confidence 999999998865 999998643 9999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCe
Q 000497 1381 CLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGH 1433 (1460)
Q Consensus 1381 lLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~ 1433 (1460)
+|||||++||..+.+.+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 123 ilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 123 LLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 99999999999999999999987654 6899999999999985 89999999985
No 338
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=7.4e-37 Score=361.06 Aligned_cols=188 Identities=27% Similarity=0.364 Sum_probs=159.4
Q ss_pred cceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------------cEEEEcCCCCCCCc-
Q 000497 626 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILSG- 687 (1460)
Q Consensus 626 ~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------------~i~y~~Q~p~l~~~- 687 (1460)
.+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++| .++||+|++++|+.
T Consensus 7 ~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~ 86 (363)
T TIGR01186 7 KGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHM 86 (363)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCC
Confidence 359999999999999999999999999999999999999999999876 49999999999975
Q ss_pred cHHHHHccCCCC---Ch-H---HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeC
Q 000497 688 TIRDNILFGKNY---DP-Q---SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDD 760 (1460)
Q Consensus 688 ti~~nI~~g~~~---~~-~---~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe 760 (1460)
||+|||.|+.++ +. + +..++++..+|+.. .+....+|||||||||+|||||+.+|+|+||||
T Consensus 87 TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~-----------~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 87 TILQNTSLGPELLGWPEQERKEKALELLKLVGLEEY-----------EHRYPDELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchh-----------hhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 999999986432 22 2 33344444455432 445666999999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000497 761 VLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 824 (1460)
Q Consensus 761 ~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 824 (1460)
|||+||+.+++++.+.+.......++|+|+|||+++++. .||+|++|++|++++.|+++++...
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999988754321234789999999999865 5999999999999999999998754
No 339
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-37 Score=322.40 Aligned_cols=202 Identities=25% Similarity=0.385 Sum_probs=170.1
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|++-.|+.. ..+|+||||+|++||+++|+|+|||||||||++|.|..+|++|+|.++|
T Consensus 2 ~~i~~~nl~k~yp~~-----~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~l 76 (258)
T COG3638 2 MMIEVKNLSKTYPGG-----HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKEL 76 (258)
T ss_pred ceEEEeeeeeecCCC-----ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHH
Confidence 358899999999743 3459999999999999999999999999999999999999999999886
Q ss_pred -----cEEEEcCCCCCCCc-cHHHHHccCCC------------CChHHHHHHH---HHhcchHHHhhccCCCcccccCCC
Q 000497 674 -----SIAYVPQVPWILSG-TIRDNILFGKN------------YDPQSYSETL---KACTLDVDISLMVGGDMAYIGEKG 732 (1460)
Q Consensus 674 -----~i~y~~Q~p~l~~~-ti~~nI~~g~~------------~~~~~~~~v~---~~~~l~~di~~~~~gd~t~vg~~g 732 (1460)
.|||++|++.|.+. ||.+|++.|+- +.++....++ +..++.+. ...+.
T Consensus 77 r~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~-----------A~qra 145 (258)
T COG3638 77 RKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDK-----------AYQRA 145 (258)
T ss_pred HHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHH-----------HHHHh
Confidence 59999999998765 99999997752 2344333333 33343332 23456
Q ss_pred CccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCe
Q 000497 733 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQ 811 (1460)
Q Consensus 733 ~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~ 811 (1460)
.+|||||+|||+|||||+++|+|+|-|||+|+|||.+++++++.+..-....|.|+|+.-|++++.. +||||+-|++|+
T Consensus 146 ~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ 225 (258)
T COG3638 146 STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGR 225 (258)
T ss_pred ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCc
Confidence 7999999999999999999999999999999999999999998743332456789999999999976 599999999999
Q ss_pred EEEecCHHHHH
Q 000497 812 VKWIGSSADLA 822 (1460)
Q Consensus 812 i~~~g~~~~l~ 822 (1460)
|+..|+.+|+.
T Consensus 226 ivfDg~~~el~ 236 (258)
T COG3638 226 IVFDGPASELT 236 (258)
T ss_pred EEEeCChhhhh
Confidence 99999998864
No 340
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=323.65 Aligned_cols=207 Identities=28% Similarity=0.361 Sum_probs=172.1
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|.++.|..... ..++++||||++.+||..+|+|+||||||||.++|+|..+|++|+|.++|
T Consensus 3 ~l~v~nl~~~y~~~~~--~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~ 80 (252)
T COG1124 3 LLSVRNLSIVYGGGKF--AFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAF 80 (252)
T ss_pred eEEEeceEEEecCCcc--hhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhh
Confidence 4788999999876421 22579999999999999999999999999999999999999999999987
Q ss_pred --cEEEEcCCCCC-C--CccHHHHHccCC-----CCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000497 674 --SIAYVPQVPWI-L--SGTIRDNILFGK-----NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 743 (1460)
Q Consensus 674 --~i~y~~Q~p~l-~--~~ti~~nI~~g~-----~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv 743 (1460)
.|-+|+|+|.- + .-||++-|.-+. +-.+++..++++..+|..... ......|||||||||
T Consensus 81 ~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l----------~R~P~eLSGGQ~QRi 150 (252)
T COG1124 81 YRPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFL----------DRRPHELSGGQRQRI 150 (252)
T ss_pred ccceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHH----------hcCchhcChhHHHHH
Confidence 38899999972 3 348888875332 222455778888888866432 234458999999999
Q ss_pred HHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHH
Q 000497 744 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 822 (1460)
Q Consensus 744 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~ 822 (1460)
||||||..+|+++|||||||+||+.+...|++-+..-...++-|.|+|||++..+.+ ||||++|++|++++.++.+++.
T Consensus 151 aIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~ 230 (252)
T COG1124 151 AIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELL 230 (252)
T ss_pred HHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhh
Confidence 999999999999999999999999999999986443223456699999999999987 9999999999999999988886
Q ss_pred hc
Q 000497 823 VS 824 (1460)
Q Consensus 823 ~~ 824 (1460)
..
T Consensus 231 ~~ 232 (252)
T COG1124 231 SH 232 (252)
T ss_pred cC
Confidence 43
No 341
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=3.9e-36 Score=341.51 Aligned_cols=208 Identities=26% Similarity=0.411 Sum_probs=176.8
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +..++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 4899999999964 4699999999999999999999999999999999999999999999987 35799
Q ss_pred EEeCCCccCC---ccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1303 VVPQSPFLFE---GSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1303 iVpQdp~lf~---gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
|+||+|.++. .|+++|+......+++++.++++.+++.+. .......||+|||||++||||++++|++
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~---------~~~~~~~LSgGq~qrv~laral~~~p~l 141 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHL---------IDAPMQKLSGGETQRVLLARALLNRPQL 141 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHH---------HhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999998765 389999754333345566666666655443 3444567999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHHHHHH
Q 000497 1380 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1455 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~ 1455 (1460)
|||||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++ ++++.|+++++.++ ..|.+++
T Consensus 142 llLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~~--~~~~~~~ 217 (251)
T PRK09544 142 LVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSLH--PEFISMF 217 (251)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhCC--HHHHHHh
Confidence 999999999999999999999987643 7899999999999865 899999965 79999999998753 3566665
No 342
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-36 Score=332.64 Aligned_cols=190 Identities=24% Similarity=0.342 Sum_probs=162.1
Q ss_pred cEEEEEEEEEecCC--CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCC---CCCceEEECCEeCCCCChHHH
Q 000497 1223 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDL 1297 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~l 1297 (1460)
.+.++||+|.|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 47899999999753 5579999999999999999999999999999999999999 89999999999998765 456
Q ss_pred hcccEEEeCCCccCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000497 1298 RGRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1376 (1460)
Q Consensus 1298 R~~i~iVpQdp~lf~g-TIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1376 (1460)
|++++++||++.+|.+ |+++|+...... . ..+....||+|||||++||||++++
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~---------~----------------~~~~~~~LS~Ge~qrl~laral~~~ 136 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC---------K----------------GNEFVRGISGGERKRVSIAEALVSR 136 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh---------c----------------cccchhhCCHHHHHHHHHHHHHhhC
Confidence 8899999999988875 999999643110 0 1223347999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEec-cChhhHh-hcCEEEEEeCCeEEEEc
Q 000497 1377 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIA-HRISTVL-NMDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1377 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~Ia-Hrl~ti~-~~DrIlVl~~G~IvE~G 1438 (1460)
|+++||||||++||+++.+.+.+.|++..+ +.|+|+++ |+.+.+. .||+|++|++|++++.|
T Consensus 137 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 137 ASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999999999999999987653 56766655 5566664 58999999999998865
No 343
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=357.94 Aligned_cols=202 Identities=28% Similarity=0.418 Sum_probs=170.2
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------c
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 674 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 674 (1460)
.++++|+++.|+.+ ..+|+|+||++++|++++|+|||||||||||++|+|+.+|++|+|.++| .
T Consensus 3 ~l~i~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ 77 (356)
T PRK11650 3 GLKLQAVRKSYDGK-----TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRD 77 (356)
T ss_pred EEEEEeEEEEeCCC-----CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 37899999998421 2359999999999999999999999999999999999999999999987 4
Q ss_pred EEEEcCCCCCCC-ccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000497 675 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 746 (1460)
Q Consensus 675 i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 746 (1460)
||||+|++.+|. .||+|||.|+.. .+. ++..++++..+|+...+. ...+|||||||||+||
T Consensus 78 ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LSgGq~QRvalA 146 (356)
T PRK11650 78 IAMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDR-----------KPRELSGGQRQRVAMG 146 (356)
T ss_pred EEEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhC-----------ChhhCCHHHHHHHHHH
Confidence 999999999996 599999998743 222 345566777777654443 3458999999999999
Q ss_pred HHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000497 747 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 824 (1460)
Q Consensus 747 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 824 (1460)
|||+.+|+++|||||||+||+.+.+.+.+.+ ..-. ..+.|+|+|||+.+.+. .||+|++|++|++++.|+++++...
T Consensus 147 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~l-~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 147 RAIVREPAVFLFDEPLSNLDAKLRVQMRLEI-QRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 9999999999999999999999999888763 2211 23789999999998765 5999999999999999999998653
No 344
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=4.6e-33 Score=336.35 Aligned_cols=450 Identities=15% Similarity=0.178 Sum_probs=313.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCh--h---HHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 000497 339 QYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSD--G---EIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY 412 (1460)
Q Consensus 339 ~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~--g---~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~ 412 (1460)
...|...++..+.|..|...+.+|-|.-....+-.... + ..-..+..|+..+..... ....+..+.+.++.-..
T Consensus 105 ~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~ 184 (604)
T COG4178 105 AQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTG 184 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 45677788999999999999999999877443322111 1 123477788877766433 33444455555555555
Q ss_pred HHHHHhH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcH
Q 000497 413 LLYTQVK---------------FAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWE 477 (1460)
Q Consensus 413 lL~~~lg---------------~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e 477 (1460)
+||..-| ..+.+.++.+++...+..++++...+...+..+.-..--.....+..+...|-+|+-|
T Consensus 185 iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE 264 (604)
T COG4178 185 ILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGE 264 (604)
T ss_pred HHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCc
Confidence 6664433 2222222222222333334444333333332222222223455788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHH
Q 000497 478 QIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW----ATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSF 553 (1460)
Q Consensus 478 ~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~----~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l 553 (1460)
+...+++++.-..=++..++..........+. .++. +++.+ .++-.+..+.++.|.+..+-..|+.+...+.-+
T Consensus 265 ~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~-v~P~l-i~ap~~f~g~i~~G~lmqa~~aF~~v~sslswf 342 (604)
T COG4178 265 KVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSV-VLPIL-IAAPRYFSGQITFGGLMQAVGAFGQVHSSLSWF 342 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHH-HHHHH-hccHhhhcCcChHHHHHHHHHHHHHHHHHHHHH
Confidence 88777776554333333322222111111111 1111 11111 111124567899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCC---CchhhhhhcCCCCcccCCCccC-CCCCceEEEEcceEeccCCCcccccccee
Q 000497 554 PWVINGLIDAFISIRRLTRFLGCSE---YKHELEQAANSPSYISNGLSNF-NSKDMAVIMQDATCSWYCNNEEEQNVVLN 629 (1460)
Q Consensus 554 ~~~i~~~~~a~~s~~Ri~~fL~~~e---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~sf~w~~~~~~~~~~~l~ 629 (1460)
...++.+.+=+++..|+.+|-..-+ .++.... . . ...... ...+..|.++|++..-+.. .+.++
T Consensus 343 i~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~-----~-~-~~~~~~~~~~~~~i~~~nl~l~~p~~-----~~ll~ 410 (604)
T COG4178 343 IDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPA-----R-T-GRRIDFDDNADHGITLENLSLRTPDG-----QTLLS 410 (604)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccC-----c-c-cccccccccccceeEEeeeeEECCCC-----Ceeec
Confidence 9999999999999999999985422 1111000 0 0 000000 0115789999999987653 24599
Q ss_pred eeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEe-C-cEEEEcCCCCCCCccHHHHHccCC---CCChHHH
Q 000497 630 QVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHAS-G-SIAYVPQVPWILSGTIRDNILFGK---NYDPQSY 704 (1460)
Q Consensus 630 ~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~-~-~i~y~~Q~p~l~~~ti~~nI~~g~---~~~~~~~ 704 (1460)
+.||++++|+.+.|.||||||||||+++|.|..|--+|.|... + .+-|+||.|.+..||.||-|++.. +++++.+
T Consensus 411 ~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l 490 (604)
T COG4178 411 ELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAEL 490 (604)
T ss_pred cceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHH
Confidence 9999999999999999999999999999999999999999887 3 489999999999999999999975 2788999
Q ss_pred HHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccC
Q 000497 705 SETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML 784 (1460)
Q Consensus 705 ~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~ 784 (1460)
.+++..|+|.+-.+++.+-++ =...||||||||+|+||.++++|++++|||.|||||++++..+++. +.. .+.
T Consensus 491 ~~vL~~vgL~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~-l~~-~lp 563 (604)
T COG4178 491 VAVLHKVGLGDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQL-LKE-ELP 563 (604)
T ss_pred HHHHHHcCcHHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHH-HHh-hCC
Confidence 999999999988877654332 4458999999999999999999999999999999999999998887 444 567
Q ss_pred CceEEEEcCCcchhhcCCEEEEEeC
Q 000497 785 QKTRILCTHNVQAISAADMVVVMDK 809 (1460)
Q Consensus 785 ~~t~ilvth~~~~l~~ad~i~~l~~ 809 (1460)
+.|+|-|.|+.......++.+.+.+
T Consensus 564 ~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 564 DATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred CCEEEEeccchhhHHHHhhheeecc
Confidence 8899999999998887777666643
No 345
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=5.9e-36 Score=334.97 Aligned_cols=205 Identities=34% Similarity=0.467 Sum_probs=180.9
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|.++.|... . .++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~-~---~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~ 77 (220)
T cd03245 2 RIEFRNVSFSYPNQ-E---IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLR 77 (220)
T ss_pred eEEEEEEEEEcCCC-C---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHH
Confidence 36889999998532 1 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHcc
Q 000497 674 -SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 751 (1460)
Q Consensus 674 -~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~ 751 (1460)
.++|++|+|++++.|++||+.++.. .++++..+.++.+++...++..|.|.+|.+.....+||||||||++||||+..
T Consensus 78 ~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~ 157 (220)
T cd03245 78 RNIGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLN 157 (220)
T ss_pred hhEEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhc
Confidence 4899999999998999999988643 34556778888899998899999999999999999999999999999999999
Q ss_pred CCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEec
Q 000497 752 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 752 ~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g 816 (1460)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 158 ~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 158 DPPILLLDEPTSAMDMNSEERLKER-LRQ-LLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999988876 333 33347999999999988789999999999997653
No 346
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=2.1e-36 Score=327.68 Aligned_cols=172 Identities=30% Similarity=0.506 Sum_probs=156.4
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh-HHHhccc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRF 1301 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i 1301 (1460)
.++++|++++| +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +..|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999998 8999999999999999999999999999999999999999999999999988764 4568899
Q ss_pred EEEeCCC---cc-CCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1302 AVVPQSP---FL-FEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1302 ~iVpQdp---~l-f~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
+|+||+| .+ +..|++||+..... ||+|||||++||||++++|
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~----------------------------------LS~G~~qrl~la~al~~~p 123 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL----------------------------------LSGGNQQKVVLARWLARDP 123 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh----------------------------------cCHHHHHHHHHHHHHccCC
Confidence 9999995 34 45799999864310 9999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeE
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1434 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~I 1434 (1460)
++++|||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||+|++|++|++
T Consensus 124 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 124 RVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999998764 47999999999999987 899999999975
No 347
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-36 Score=345.87 Aligned_cols=209 Identities=26% Similarity=0.378 Sum_probs=172.1
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...+++++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~---~~~~~~i~ 81 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ---ALQKNLVA 81 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH---hhccceEE
Confidence 58999999999632 469999999999999999999999999999999999999999999999998752 12234699
Q ss_pred EEeCCCcc---CCccHHHhcCcCC--------CC---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000497 1303 VVPQSPFL---FEGSLRDNLDPFH--------MN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1368 (1460)
Q Consensus 1303 iVpQdp~l---f~gTIR~NLdp~~--------~~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1368 (1460)
|+||+|.+ +..++++|+.... .. .++++.++++. +|++........+||||||||++
T Consensus 82 ~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------~gl~~~~~~~~~~LSgG~~qrv~ 152 (272)
T PRK15056 82 YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALAR---------VDMVEFRHRQIGELSGGQKKRVF 152 (272)
T ss_pred EeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHH---------cCChhHhcCCcccCCHHHHHHHH
Confidence 99999865 4568999975321 00 01123333333 35544445556689999999999
Q ss_pred HHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1369 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1369 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
|||||+++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+++++ +|++++.|+++++..
T Consensus 153 laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~~~ 230 (272)
T PRK15056 153 LARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETTFT 230 (272)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhccC
Confidence 9999999999999999999999999999999998764 47899999999998865 7999777 899999999999864
No 348
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2e-35 Score=381.32 Aligned_cols=226 Identities=24% Similarity=0.341 Sum_probs=156.1
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHh------ccC---CCCCce------------
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALF------RLT---PICGGQ------------ 1281 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~------rl~---~~~~G~------------ 1281 (1460)
.++++|++. ..|+|+|++|++||.+||+|.+|||||||+.-++ ++. .+..+.
T Consensus 614 ~L~v~~l~~-------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 686 (943)
T PRK00349 614 FLKLKGARE-------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKV 686 (943)
T ss_pred eEEecCCcc-------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCce
Confidence 477888752 2599999999999999999999999999998764 211 122233
Q ss_pred EEECCEeCCCCC----------hHHHhcccE---------EEeCCCccCC-----------ccHHHhcCcCCC-------
Q 000497 1282 ILVDGLNIINTP----------VRDLRGRFA---------VVPQSPFLFE-----------GSLRDNLDPFHM------- 1324 (1460)
Q Consensus 1282 I~IDG~di~~i~----------~~~lR~~i~---------iVpQdp~lf~-----------gTIR~NLdp~~~------- 1324 (1460)
|.||..+|..-+ .+.+|.-.+ +-++.-.+.+ |+++.|+.+...
T Consensus 687 v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 766 (943)
T PRK00349 687 IDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDV 766 (943)
T ss_pred EEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCcc
Confidence 344444433111 122333332 2222211111 345555433211
Q ss_pred -----C------------ChH-----HHHHHHHHh----cH---HHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHc
Q 000497 1325 -----N------------DDL-----KIWSVLEKC----HV---KEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1374 (1460)
Q Consensus 1325 -----~------------sd~-----ei~~aL~~~----~l---~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL 1374 (1460)
+ +-. .+.++++-. ++ .+.++.+||+. .++.....||||||||+.|||+|+
T Consensus 767 C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~ 846 (943)
T PRK00349 767 CKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELS 846 (943)
T ss_pred ccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhhhHHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHh
Confidence 0 111 122222221 11 22334448875 467778899999999999999999
Q ss_pred cCC---CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEE------eCCeEEEEcChhHHh
Q 000497 1375 KSS---KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL------DHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1375 r~~---~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl------~~G~IvE~G~p~eLl 1444 (1460)
++| +++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+++.
T Consensus 847 ~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~ 926 (943)
T PRK00349 847 KRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIKTADWIIDLGPEGGDGGGEIVATGTPEEVA 926 (943)
T ss_pred cCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEecCCcCCCCCEEEEeCCHHHHH
Confidence 999 9999999999999999999999998764 588999999999999999999999 799999999999999
Q ss_pred ccCCcHHHHHH
Q 000497 1445 QDECSVFSSFV 1455 (1460)
Q Consensus 1445 ~~~~~~f~~l~ 1455 (1460)
+++.+.=.+.+
T Consensus 927 ~~~~s~t~~~l 937 (943)
T PRK00349 927 KVEASYTGRYL 937 (943)
T ss_pred hCcccHHHHHH
Confidence 88765443433
No 349
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=2.7e-36 Score=330.10 Aligned_cols=182 Identities=29% Similarity=0.430 Sum_probs=161.3
Q ss_pred cEEEEEEEEEecCC----CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccC--CCCCceEEECCEeCCCCChHH
Q 000497 1223 LIEFQNVTMRYKPS----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRD 1296 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~----~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~ 1296 (1460)
.|+++||+++|+.. ..++|+|+||+|++||+++|+|+||||||||+++|.|++ +|++|+|.+||.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 48999999999642 256999999999999999999999999999999999999 9999999999999875 36
Q ss_pred HhcccEEEeCCCccCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1297 LRGRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1297 lR~~i~iVpQdp~lf~g-TIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
+|++++++||++.+|.+ |+++|+.... .. . .||+|||||++||||+++
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~~------------~~---------~----------~LS~G~~qrv~laral~~ 128 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFAA------------KL---------R----------GLSGGERKRVSIALELVS 128 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHHH------------Hh---------c----------cCCHHHHHHHHHHHHHHc
Confidence 78899999999998875 9999984210 00 0 699999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChh-hHh-hcCEEEEEeCCeEEEEc
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIS-TVL-NMDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~-ti~-~~DrIlVl~~G~IvE~G 1438 (1460)
+|++++|||||++||..+.+.+.+.|++.. +++|+|+++|+++ .+. -||+|++|++|++++.|
T Consensus 129 ~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 129 NPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 999999999999999999999999998764 4899999999997 454 48999999999998764
No 350
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=7.2e-36 Score=341.34 Aligned_cols=217 Identities=22% Similarity=0.325 Sum_probs=177.7
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhcc--CCCCCceEEECCEeCCCCChHHHhc-
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL--TPICGGQILVDGLNIINTPVRDLRG- 1299 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl--~~~~~G~I~IDG~di~~i~~~~lR~- 1299 (1460)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++...+.+..++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 4999999999963 3699999999999999999999999999999999998 6899999999999999888766554
Q ss_pred ccEEEeCCCccCCc-cHHHhcCcCCC----C---ChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCC-CCChhHHHHHHH
Q 000497 1300 RFAVVPQSPFLFEG-SLRDNLDPFHM----N---DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGI-SFSVGQRQLICL 1369 (1460)
Q Consensus 1300 ~i~iVpQdp~lf~g-TIR~NLdp~~~----~---sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~-~LSgGQrQrl~L 1369 (1460)
.++++||+|.+|++ |+++|+..... . .+.+-++.. ....+.++.+|+. ...+.... .||||||||++|
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~l 162 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFL--EIINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNEI 162 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHH--HHHHHHHHHcCCchhhhccccccCCCHHHHHHHHH
Confidence 58999999999987 88999753210 0 010001111 1123334444665 34455444 599999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh--cCEEEEEeCCeEEEEcChhHH
Q 000497 1370 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN--MDEILILDHGHLVEQGNPQTL 1443 (1460)
Q Consensus 1370 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~--~DrIlVl~~G~IvE~G~p~eL 1443 (1460)
|||++++|+|+||||||++||.++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+|+++
T Consensus 163 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 239 (252)
T CHL00131 163 LQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDAELA 239 (252)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecChhhh
Confidence 999999999999999999999999999999998764 48999999999999875 799999999999999999844
No 351
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.8e-36 Score=354.49 Aligned_cols=203 Identities=28% Similarity=0.355 Sum_probs=168.3
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|+++.|+.... ..++|+|+||++++||+++|+||||||||||+++|.|+.+|++|+|.++|
T Consensus 2 I~~~~lsk~y~~~~~--~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~ 79 (343)
T TIGR02314 2 IKLSNITKVFHQGTK--TIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTK 79 (343)
T ss_pred EEEEEEEEEECCCCc--ceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHH
Confidence 678999999963211 12469999999999999999999999999999999999999999999875
Q ss_pred ---cEEEEcCCCCCCC-ccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
.|||++|++.++. .||+|||.++.. .+. ++..++++..+|.+.. ......||||||||
T Consensus 80 ~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~-----------~~~~~~LSgGqkQR 148 (343)
T TIGR02314 80 ARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKH-----------DSYPSNLSGGQKQR 148 (343)
T ss_pred HhcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHH
Confidence 4899999999985 699999987532 222 2344555555554332 34456899999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHH
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 820 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 820 (1460)
|+|||||..+|+++|||||||+||+.+.+.+++. +..-. ..+.|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 149 V~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~l-L~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~ 227 (343)
T TIGR02314 149 VAIARALASNPKVLLCDEATSALDPATTQSILEL-LKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSE 227 (343)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999998876 32211 237899999999999865 99999999999999999999
Q ss_pred HHh
Q 000497 821 LAV 823 (1460)
Q Consensus 821 l~~ 823 (1460)
+..
T Consensus 228 v~~ 230 (343)
T TIGR02314 228 IFS 230 (343)
T ss_pred HHc
Confidence 864
No 352
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=3.2e-36 Score=325.73 Aligned_cols=177 Identities=33% Similarity=0.522 Sum_probs=158.5
Q ss_pred EEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000497 1225 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1304 (1460)
Q Consensus 1225 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iV 1304 (1460)
+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 57899999964 4699999999999999999999999999999999999999999999999999988888888899999
Q ss_pred eCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000497 1305 PQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1384 (1460)
Q Consensus 1305 pQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDE 1384 (1460)
|| +++.+++. ..+...+.+||+|||||++||||++++|+++||||
T Consensus 79 ~q--------------------------~l~~~gl~---------~~~~~~~~~LS~G~~qrl~laral~~~p~llllDE 123 (180)
T cd03214 79 PQ--------------------------ALELLGLA---------HLADRPFNELSGGERQRVLLARALAQEPPILLLDE 123 (180)
T ss_pred HH--------------------------HHHHcCCH---------hHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99 44444443 33445567899999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHh-hcCEEEEEeCCeEEEEc
Q 000497 1385 CTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1385 aTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G 1438 (1460)
||++||.++.+.+.+.|++..+ ++|+|++||+++.+. -||++++|++|++++.|
T Consensus 124 P~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 124 PTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred CccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999987654 789999999999985 48999999999998754
No 353
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-36 Score=351.28 Aligned_cols=209 Identities=27% Similarity=0.427 Sum_probs=171.3
Q ss_pred CCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC---------
Q 000497 603 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------- 673 (1460)
Q Consensus 603 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------- 673 (1460)
.+..++++|++|.|+.... ...++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 18 ~~~~l~~~nl~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~ 96 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQE-NELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNN 96 (320)
T ss_pred CCceEEEEeEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccc
Confidence 4457999999999964211 113469999999999999999999999999999999999999999998763
Q ss_pred --------------------cEEEEcCCC--CCCCccHHHHHccCCC---CChH----HHHHHHHHhcchHHHhhccCCC
Q 000497 674 --------------------SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGD 724 (1460)
Q Consensus 674 --------------------~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd 724 (1460)
.++||+|+| ++++.||+|||.|+.. .+++ +..+.++.+++..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~--------- 167 (320)
T PRK13631 97 HELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD--------- 167 (320)
T ss_pred ccccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh---------
Confidence 279999998 7999999999998742 2222 2333444444421
Q ss_pred cccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCE
Q 000497 725 MAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADM 803 (1460)
Q Consensus 725 ~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~ 803 (1460)
...++.+.+||||||||++|||||..+|+++||||||++||+.+.+.+++. +.....+++|+|++||+++.+. .||+
T Consensus 168 -~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~-L~~l~~~g~TiiivtHd~~~~~~~adr 245 (320)
T PRK13631 168 -SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQL-ILDAKANNKTVFVITHTMEHVLEVADE 245 (320)
T ss_pred -hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCE
Confidence 234667889999999999999999999999999999999999999988876 3321235789999999999875 6999
Q ss_pred EEEEeCCeEEEecCHHHHHh
Q 000497 804 VVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 804 i~~l~~G~i~~~g~~~~l~~ 823 (1460)
|++|++|++++.|+++++..
T Consensus 246 i~vl~~G~i~~~g~~~~~~~ 265 (320)
T PRK13631 246 VIVMDKGKILKTGTPYEIFT 265 (320)
T ss_pred EEEEECCEEEEeCCHHHHhc
Confidence 99999999999999998754
No 354
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=5.9e-36 Score=340.28 Aligned_cols=210 Identities=24% Similarity=0.387 Sum_probs=177.0
Q ss_pred EEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000497 1225 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1304 (1460)
Q Consensus 1225 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iV 1304 (1460)
+++||+++ .+|+|+||+|++||++||+|+||||||||+++|.|+++ .+|+|.+||.++...+...+|+.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-GSGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-CCeEEEECCEecCcCCHHHHhhheEEe
Confidence 56788774 28999999999999999999999999999999999986 499999999999988888888899999
Q ss_pred eCCCcc-CCccHHHhcCcCCCC-C-hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc------
Q 000497 1305 PQSPFL-FEGSLRDNLDPFHMN-D-DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK------ 1375 (1460)
Q Consensus 1305 pQdp~l-f~gTIR~NLdp~~~~-s-d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr------ 1375 (1460)
||+|.+ +..|+++|+..+... . ..+. .....+.++.+|++.........||+|||||++||||+++
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~~~~ 149 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAV-----ASALNEVAEALGLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWPDIN 149 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHH-----HHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccccC
Confidence 999854 567999999764321 1 1111 1123345555577666666777899999999999999997
Q ss_pred -CCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1376 -SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1376 -~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 150 p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 223 (248)
T PRK03695 150 PAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLTP 223 (248)
T ss_pred CCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhCc
Confidence 679999999999999999999999998764 47899999999997754 899999999999999999998753
No 355
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-36 Score=329.32 Aligned_cols=181 Identities=24% Similarity=0.382 Sum_probs=160.1
Q ss_pred cEEEEEEEEEecCC--CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccC--CCCCceEEECCEeCCCCChHHHh
Q 000497 1223 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDLR 1298 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~lR 1298 (1460)
.|+++|++++|++. ..++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 58999999999642 246999999999999999999999999999999999986 489999999999986 5678
Q ss_pred cccEEEeCCCccCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1299 GRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1299 ~~i~iVpQdp~lf~g-TIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
++++++||+|.+|.+ |+++|+.... .++ +||||||||++||||++++|
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~---------~~~----------------------~LSgGe~qrv~la~al~~~p 127 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFSA---------LLR----------------------GLSVEQRKRLTIGVELAAKP 127 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHHH---------HHh----------------------cCCHHHhHHHHHHHHHhcCC
Confidence 899999999988875 9999986310 000 69999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-H-hhcCEEEEEeC-CeEEEEc
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST-V-LNMDEILILDH-GHLVEQG 1438 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~t-i-~~~DrIlVl~~-G~IvE~G 1438 (1460)
++++|||||+++|.++.+.+.+.|++.. +++|+|+|||+++. + ..||+|++|++ |++++.|
T Consensus 128 ~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 128 SILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred cEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 9999999999999999999999998764 47999999999984 4 56899999999 9999875
No 356
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=5.4e-36 Score=319.09 Aligned_cols=163 Identities=33% Similarity=0.454 Sum_probs=150.1
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999643 46999999999999999999999999999999999999999999999873 68999
Q ss_pred EeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000497 1304 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1383 (1460)
Q Consensus 1304 VpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1383 (1460)
+||+|.++++|++||+... ....||+|||||++||||++++|++++||
T Consensus 69 ~~q~~~~~~~tv~~nl~~~--------------------------------~~~~LS~G~~~rv~laral~~~p~~lllD 116 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP--------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLD 116 (166)
T ss_pred ECCCCccccccHHHHhhcc--------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 9999999999999999642 23579999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCC
Q 000497 1384 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHG 1432 (1460)
Q Consensus 1384 EaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G 1432 (1460)
|||++||.++.+.+.+.|++. ++|+|++||+++....||+|++|++|
T Consensus 117 EPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~ 163 (166)
T cd03223 117 EATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGE 163 (166)
T ss_pred CCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCC
Confidence 999999999999999999876 68999999999988889999999876
No 357
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=6e-36 Score=336.83 Aligned_cols=207 Identities=25% Similarity=0.370 Sum_probs=168.4
Q ss_pred cceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC----CCceEEECCEeCCCCChHHHhcccEEEeCCCc-cC-C-
Q 000497 1240 ALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI----CGGQILVDGLNIINTPVRDLRGRFAVVPQSPF-LF-E- 1312 (1460)
Q Consensus 1240 vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~----~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~-lf-~- 1312 (1460)
+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..+++++|+||+|. .| +
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 57999999999999999999999999999999999999 899999999998754 233468999999995 34 3
Q ss_pred ccHHHhcCcC-C--CCChHHHHHHHHHhcHHHHHHhCCCc---hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccc
Q 000497 1313 GSLRDNLDPF-H--MNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1386 (1460)
Q Consensus 1313 gTIR~NLdp~-~--~~sd~ei~~aL~~~~l~~~i~~lgLd---t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaT 1386 (1460)
-|+++|+... . ....++. +....+.++.+|++ ...+....+||+|||||++||||++++|+||||||||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt 153 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQA-----RALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPT 153 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHH-----HHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 4888887321 0 0111110 11123334444565 4566677789999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHHHH
Q 000497 1387 ANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSS 1453 (1460)
Q Consensus 1387 S~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~ 1453 (1460)
++||.++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++...+...|.+
T Consensus 154 ~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 223 (230)
T TIGR02770 154 TDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETTR 223 (230)
T ss_pred cccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHHH
Confidence 99999999999999987643 7899999999999965 8999999999999999999998766555554
No 358
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2.6e-36 Score=334.29 Aligned_cols=197 Identities=27% Similarity=0.376 Sum_probs=163.6
Q ss_pred EEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh----HHHhccc
Q 000497 1226 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV----RDLRGRF 1301 (1460)
Q Consensus 1226 f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~----~~lR~~i 1301 (1460)
++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4789999963 469999999999999999999999999999999999999999999999999875542 2467889
Q ss_pred EEEeCCCccCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1302 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1302 ~iVpQdp~lf~-gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
++++|+|.+|+ .|+++|+.+... ...++..+ .+.+.++.+|++...+....+||+|||||++|||||+++|
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~lS~G~~qr~~laral~~~p 153 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKRE-----KKKEALEKVGLNLKLKQKIYELSGGEQQRVALARAILKDP 153 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCchhhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 99999999997 599999965211 11111111 1223344446655556666789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEE
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL 1429 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl 1429 (1460)
++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+..||+|++|
T Consensus 154 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 154 PLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred CEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999998764 479999999999988889999875
No 359
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=9.6e-36 Score=332.59 Aligned_cols=199 Identities=39% Similarity=0.692 Sum_probs=175.6
Q ss_pred EEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--------------
Q 000497 608 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 673 (1460)
Q Consensus 608 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 673 (1460)
.+.|+.|.|+.. .++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~~~~~~~~~-----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (218)
T cd03290 2 QVTNGYFSWGSG-----LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSR 76 (218)
T ss_pred eeeeeEEecCCC-----CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchh
Confidence 467888998743 2359999999999999999999999999999999999999999998854
Q ss_pred ---cEEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHc
Q 000497 674 ---SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 750 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly 750 (1460)
.++|++|+|.+++.|++|||.++.+++.++.+++++++++...++.+|.|++|.++....+||||||||++||||++
T Consensus 77 ~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~ 156 (218)
T cd03290 77 NRYSVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALY 156 (218)
T ss_pred hcceEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHh
Confidence 38999999999999999999987766667778899999999888999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCcccccHHHHHHHHHH-hhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000497 751 HGSDIYMLDDVLSAVDAQVARWILSN-AIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 811 (1460)
Q Consensus 751 ~~~~illlDe~~s~lD~~~~~~i~~~-~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 811 (1460)
.+|+++||||||++||+.+.+.+.+. ++.....++.|+|++||+.+.++.||++++|++|.
T Consensus 157 ~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 157 QNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred hCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998877762 22221224689999999999998899999999884
No 360
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1e-35 Score=339.28 Aligned_cols=215 Identities=18% Similarity=0.298 Sum_probs=171.0
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccC--CCCCceEEECCEeCCCCChHHHh-cc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDLR-GR 1300 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~lR-~~ 1300 (1460)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999964 36999999999999999999999999999999999995 69999999999999887776654 57
Q ss_pred cEEEeCCCccCCc-cHHHhcCcC-C---CCChHHHHHHHHHhc----HHHHHHhCCCch-hhhcCC-CCCChhHHHHHHH
Q 000497 1301 FAVVPQSPFLFEG-SLRDNLDPF-H---MNDDLKIWSVLEKCH----VKEEVEAVGLET-FVKESG-ISFSVGQRQLICL 1369 (1460)
Q Consensus 1301 i~iVpQdp~lf~g-TIR~NLdp~-~---~~sd~ei~~aL~~~~----l~~~i~~lgLdt-~v~e~G-~~LSgGQrQrl~L 1369 (1460)
++++||+|.+++. |..+|+... . .....+ .++..+ +.+.++.++++. ...... .+||||||||++|
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrv~l 156 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQE---PLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDI 156 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccc---cchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCHHHHHHHHH
Confidence 9999999987765 544443211 0 000100 111111 223334446632 222223 2699999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC-CcEEEEeccChhhHhh--cCEEEEEeCCeEEEEcChhHH
Q 000497 1370 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVLN--MDEILILDHGHLVEQGNPQTL 1443 (1460)
Q Consensus 1370 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~-~~TvI~IaHrl~ti~~--~DrIlVl~~G~IvE~G~p~eL 1443 (1460)
|||++++|+||||||||++||.++.+.+.+.|++..+ ++|||+|||+++.+.. +|+|++|++|++++.|++++.
T Consensus 157 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~~~~ 233 (248)
T PRK09580 157 LQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLV 233 (248)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999887643 7899999999999987 799999999999999999855
No 361
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-36 Score=352.47 Aligned_cols=202 Identities=28% Similarity=0.411 Sum_probs=169.0
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|+++.|.. ..+|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r 78 (351)
T PRK11432 5 NFVVLKNITKRFGS------NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQR 78 (351)
T ss_pred cEEEEEeEEEEECC------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHC
Confidence 36889999999952 2359999999999999999999999999999999999999999999976
Q ss_pred cEEEEcCCCCCCCc-cHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHH
Q 000497 674 SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 745 (1460)
Q Consensus 674 ~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~l 745 (1460)
+||||+|++.+|.. ||+|||.|+.. .++ ++.+++++..++.... ......|||||||||+|
T Consensus 79 ~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~-----------~r~~~~LSgGq~QRVaL 147 (351)
T PRK11432 79 DICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFE-----------DRYVDQISGGQQQRVAL 147 (351)
T ss_pred CEEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHH
Confidence 59999999999865 99999998743 222 2344555555554322 34456899999999999
Q ss_pred HHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHh
Q 000497 746 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 746 ARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
||||+.+|+++|||||||+||+.+.+.+.+. +..-. ..+.|+|+|||+.+.+. .||+|++|++|++.+.|+++++..
T Consensus 148 ARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~-l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~ 226 (351)
T PRK11432 148 ARALILKPKVLLFDEPLSNLDANLRRSMREK-IRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYR 226 (351)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999988776 33211 23789999999999875 599999999999999999999864
Q ss_pred c
Q 000497 824 S 824 (1460)
Q Consensus 824 ~ 824 (1460)
.
T Consensus 227 ~ 227 (351)
T PRK11432 227 Q 227 (351)
T ss_pred C
Confidence 3
No 362
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=5.7e-36 Score=336.68 Aligned_cols=194 Identities=27% Similarity=0.364 Sum_probs=163.3
Q ss_pred ceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccCC-ccHHHhc
Q 000497 1241 LHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFE-GSLRDNL 1319 (1460)
Q Consensus 1241 L~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~-gTIR~NL 1319 (1460)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+++||+|.+|+ .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 579999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CcC-----CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHH
Q 000497 1320 DPF-----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTA 1394 (1460)
Q Consensus 1320 dp~-----~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te 1394 (1460)
... ...++++..+ .+.+.++.+|++.........||||||||++|||||+++|++|||||||++||+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRA-----IVEEHIALVGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHHhcccCCCHHHHHH-----HHHHHHHHcCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 642 1122222111 123344445666656666778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHh
Q 000497 1395 SILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1395 ~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++.+++
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 99999998764 37899999999999875 8999999999999999887663
No 363
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.1e-35 Score=352.34 Aligned_cols=228 Identities=27% Similarity=0.454 Sum_probs=183.7
Q ss_pred cEEEEEEEEEecCCCC--ccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCC----CceEEECCEeCCCCChHH
Q 000497 1223 LIEFQNVTMRYKPSLP--AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC----GGQILVDGLNIINTPVRD 1296 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~--~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~----~G~I~IDG~di~~i~~~~ 1296 (1460)
-++++|++..|..... .+++||||+|.+||.+||||+|||||||+.++|.|+.++. +|+|.+||.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975433 5999999999999999999999999999999999999987 899999999999988765
Q ss_pred Hh----cccEEEeCCCc-cCCc--cHHHhcC----cCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhc--CCCCCChhH
Q 000497 1297 LR----GRFAVVPQSPF-LFEG--SLRDNLD----PFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKE--SGISFSVGQ 1363 (1460)
Q Consensus 1297 lR----~~i~iVpQdp~-lf~g--TIR~NLd----p~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e--~G~~LSgGQ 1363 (1460)
.| ++|++|||||+ .++- ||.+-+. .....+.+| + +....+.++..|+...... -...|||||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~e---a--~~~a~elL~~Vgl~~~~~~~~yPheLSGG~ 159 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAE---A--RKRAVELLEQVGLPDPERRDRYPHQLSGGM 159 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHH---H--HHHHHHHHHHcCCCChhhhccCCcccCchH
Confidence 53 57999999996 3443 4544432 111111111 0 0111222333366544443 567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcCh
Q 000497 1364 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1440 (1460)
Q Consensus 1364 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1440 (1460)
|||+.||+||..+|++||+||||.+||+.|.+.|.+.|++.. .+.++|+|||++..+.+ ||||+||.+|+++|.|++
T Consensus 160 rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~ 239 (539)
T COG1123 160 RQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPT 239 (539)
T ss_pred HHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCH
Confidence 999999999999999999999999999999999999998765 58999999999999976 899999999999999999
Q ss_pred hHHhccCCcHHHHHH
Q 000497 1441 QTLLQDECSVFSSFV 1455 (1460)
Q Consensus 1441 ~eLl~~~~~~f~~l~ 1455 (1460)
+++++++...|.+..
T Consensus 240 ~~i~~~p~hpYT~~L 254 (539)
T COG1123 240 EEILSNPQHPYTRGL 254 (539)
T ss_pred HHHHhccCCcccHHH
Confidence 999998876565443
No 364
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=7.9e-36 Score=336.89 Aligned_cols=195 Identities=29% Similarity=0.381 Sum_probs=160.8
Q ss_pred CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEe-CCCccCC-ccH
Q 000497 1238 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP-QSPFLFE-GSL 1315 (1460)
Q Consensus 1238 ~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVp-Qdp~lf~-gTI 1315 (1460)
.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|+| |++.+|. .|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 4699999999999999999999999999999999999999999999999987653 346788999997 6676764 599
Q ss_pred HHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHH
Q 000497 1316 RDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQ 1392 (1460)
Q Consensus 1316 R~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~ 1392 (1460)
++|+.... ...+++..+. ..+.++.+|++.........||+|||||++||||++.+|++|||||||++||++
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~ 187 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKR-----LDELSELLDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVV 187 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHH
Confidence 99985422 1222222221 122333446655555556689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEc
Q 000497 1393 TASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1393 te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1438 (1460)
+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 188 ~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 188 AQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999998764 37899999999998865 8999999999998765
No 365
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-36 Score=336.88 Aligned_cols=198 Identities=28% Similarity=0.367 Sum_probs=163.6
Q ss_pred EEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--------------
Q 000497 608 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 673 (1460)
Q Consensus 608 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 673 (1460)
+++|+++.|.. .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 75 (235)
T cd03261 2 ELRGLTKSFGG------RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRL 75 (235)
T ss_pred eEEEEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHH
Confidence 57888988852 2359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCCc-cHHHHHccCCC----CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 --SIAYVPQVPWILSG-TIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 --~i~y~~Q~p~l~~~-ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
.++|++|+|.+++. |++||+.++.. .++ ++..++++.+++.... .....+||||||||
T Consensus 76 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qr 144 (235)
T cd03261 76 RRRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAE-----------DLYPAELSGGMKKR 144 (235)
T ss_pred hcceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHH
Confidence 38999999998876 99999987531 222 2344455555554322 33446899999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHH
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 820 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 820 (1460)
|+||||+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 145 v~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 223 (235)
T cd03261 145 VALARALALDPELLLYDEPTAGLDPIASGVIDDL-IRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEE 223 (235)
T ss_pred HHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHH
Confidence 9999999999999999999999999999988876 332122 37899999999998765 99999999999999999888
Q ss_pred HHh
Q 000497 821 LAV 823 (1460)
Q Consensus 821 l~~ 823 (1460)
+..
T Consensus 224 ~~~ 226 (235)
T cd03261 224 LRA 226 (235)
T ss_pred HcC
Confidence 753
No 366
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-36 Score=320.33 Aligned_cols=221 Identities=25% Similarity=0.428 Sum_probs=189.6
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hcccE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1302 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1302 (1460)
++.+|++.+|.. -.+++||||++++||.+|++|||||||||++|++.|+|+|++|+|.++|.||..++++.. |..|+
T Consensus 5 L~v~~l~k~FGG--l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 5 LEVRGLSKRFGG--LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeccceeecCC--EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 678999999964 359999999999999999999999999999999999999999999999999999998775 45688
Q ss_pred EEeCCCccCCc-cHHHhcCcCCCC------------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000497 1303 VVPQSPFLFEG-SLRDNLDPFHMN------------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1369 (1460)
Q Consensus 1303 iVpQdp~lf~g-TIR~NLdp~~~~------------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1369 (1460)
--.|.+-+|++ |+-||+.-.... ...+-.++.++ ..+.++.+||+...++...+||+||++||-|
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~--A~~~Le~vgL~~~a~~~A~~LsyG~qR~LEI 160 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARER--ARELLEFVGLGELADRPAGNLSYGQQRRLEI 160 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHH--HHHHHHHcCCchhhcchhhcCChhHhHHHHH
Confidence 88999999987 999998532110 00011222222 2344555699998888888999999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1370 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1370 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
||||..+|++|+||||.++|.++-...+.+.|++..+ +.|+++|-|+++.+++ ||||+||+.|+++.+|+|+|..++
T Consensus 161 ArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~~d 240 (250)
T COG0411 161 ARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVRNN 240 (250)
T ss_pred HHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHhcC
Confidence 9999999999999999999999888888899988764 5899999999999987 899999999999999999999987
Q ss_pred CC
Q 000497 1447 EC 1448 (1460)
Q Consensus 1447 ~~ 1448 (1460)
+.
T Consensus 241 p~ 242 (250)
T COG0411 241 PR 242 (250)
T ss_pred HH
Confidence 63
No 367
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.5e-36 Score=298.98 Aligned_cols=197 Identities=25% Similarity=0.408 Sum_probs=171.0
Q ss_pred EecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCccC
Q 000497 1232 RYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF 1311 (1460)
Q Consensus 1232 ~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf 1311 (1460)
+|.....++|+|+||++++||.++|.||||||||||++.+.-+..|++|.++..|.|++..+++.+|++++|+-|.|-||
T Consensus 10 ~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLf 89 (223)
T COG4619 10 GYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALF 89 (223)
T ss_pred HhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCcccc
Confidence 46556678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHhcC-cCC---CCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccc
Q 000497 1312 EGSLRDNLD-PFH---MNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1386 (1460)
Q Consensus 1312 ~gTIR~NLd-p~~---~~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaT 1386 (1460)
.+||.+|+- |+. ...|.. ...+++...+++ +.+..+..+||||||||++|+|-|---|+||+|||+|
T Consensus 90 g~tVeDNlifP~~~r~rr~dr~--------aa~~llar~~l~~~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~T 161 (223)
T COG4619 90 GDTVEDNLIFPWQIRNRRPDRA--------AALDLLARFALPDSILTKNITELSGGEKQRIALIRNLQFMPKILLLDEIT 161 (223)
T ss_pred ccchhhccccchHHhccCCChH--------HHHHHHHHcCCchhhhcchhhhccchHHHHHHHHHHhhcCCceEEecCch
Confidence 999999984 432 222321 122333334443 4456667789999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhh-HhhcCEEEEEeCCeEEE
Q 000497 1387 ANVDAQTASILQNAISSEC--KGMTVITIAHRIST-VLNMDEILILDHGHLVE 1436 (1460)
Q Consensus 1387 S~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~t-i~~~DrIlVl~~G~IvE 1436 (1460)
|+||..+.+.|.+.|.+++ ++..++.|||+-+. ++.+||++-+..|++-|
T Consensus 162 sALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~ 214 (223)
T COG4619 162 SALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGE 214 (223)
T ss_pred hhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcccc
Confidence 9999999999999999887 48899999999997 88899999999998744
No 368
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.7e-35 Score=351.97 Aligned_cols=202 Identities=25% Similarity=0.373 Sum_probs=170.4
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|+++.|.. ..+|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|
T Consensus 13 ~~L~l~~l~~~~~~------~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r 86 (375)
T PRK09452 13 PLVELRGISKSFDG------KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENR 86 (375)
T ss_pred ceEEEEEEEEEECC------eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHC
Confidence 45899999999853 2359999999999999999999999999999999999999999999986
Q ss_pred cEEEEcCCCCCCCc-cHHHHHccCCCC---Ch----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHH
Q 000497 674 SIAYVPQVPWILSG-TIRDNILFGKNY---DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 745 (1460)
Q Consensus 674 ~i~y~~Q~p~l~~~-ti~~nI~~g~~~---~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~l 745 (1460)
.+|||+|++.+|.. ||+|||.|+... ++ ++.+++++..++....+.. ..+|||||||||+|
T Consensus 87 ~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------p~~LSgGq~QRVaL 155 (375)
T PRK09452 87 HVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRK-----------PHQLSGGQQQRVAI 155 (375)
T ss_pred CEEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHHHH
Confidence 49999999999865 999999987432 22 3455666666776544443 45899999999999
Q ss_pred HHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHh
Q 000497 746 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 746 ARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
||||+.+|+++|||||||+||+...+.+.+. +..-. ..+.|+|+|||+.+.+. .||+|++|++|+|.+.|+++++..
T Consensus 156 ARaL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~ 234 (375)
T PRK09452 156 ARAVVNKPKVLLLDESLSALDYKLRKQMQNE-LKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYE 234 (375)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999998888776 33211 23789999999999865 599999999999999999999865
Q ss_pred c
Q 000497 824 S 824 (1460)
Q Consensus 824 ~ 824 (1460)
.
T Consensus 235 ~ 235 (375)
T PRK09452 235 E 235 (375)
T ss_pred C
Confidence 3
No 369
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-33 Score=308.13 Aligned_cols=507 Identities=17% Similarity=0.149 Sum_probs=331.0
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000497 270 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGY-VLAIALGLTSILKSFFDTQYSFHLSKLK 348 (1460)
Q Consensus 270 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (1460)
+.-.++|.++|+++....+.++...... .++-.+-+++-+......++ .+.+++.+..++.+.. ......-+|
T Consensus 3 ~ll~llr~nr~~~i~~~a~s~a~g~~g~---~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~i---s~lg~t~~g 76 (546)
T COG4615 3 LLLLLLRQNRWPFISVMALSLASGALGI---GLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLI---SQLGLTTLG 76 (546)
T ss_pred hHHHHhcccccHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 3457888999998887776665544333 22222223332211111111 1222222222222221 222233344
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000497 349 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 428 (1460)
Q Consensus 349 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v 428 (1460)
..+-..+...+-+|.+.-|....++..++.++.-.+.|+..|...+..+.++.-+.+-+..+...|++.-+..++..++.
T Consensus 77 q~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV~ 156 (546)
T COG4615 77 QHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVVW 156 (546)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 44444555566688888888777777889999999999999997777777666555444445555666556666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000497 429 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWE--QIFSSWLMKTRSSEVKHLSTRKYLDAWC- 505 (1460)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e--~~~~~~i~~~R~~El~~~~~~~~~~~~~- 505 (1460)
+++.+..+++...+..+......+.-|+-.+..+.++.|-|.+|...-- ..+.+.+..- .+|.+. +..+...+.
T Consensus 157 ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~-a~~~r~--~~~~~n~f~~ 233 (546)
T COG4615 157 IVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPD-AQEYRH--HIIRANTFHL 233 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcc-hHHHHh--hhhhhhHHHH
Confidence 7777777888888888888888899999999999999999999987632 1121111110 111111 111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCC-CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCch-hh
Q 000497 506 VFFWATTPTLFSLFTFGLFALMGHQL-DAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH-EL 583 (1460)
Q Consensus 506 ~~~~~~~~~~~~~~~f~~~~~~~~~L-t~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~-~~ 583 (1460)
.........+..++....|+...-.. +...+.|....+-.++.|+.++...+|.+..|.++++||.++=..|+..+ ..
T Consensus 234 la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~~ 313 (546)
T COG4615 234 LAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADFPR 313 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccCCC
Confidence 11112222333344433343322112 22244454455667889999999999999999999999999765443322 11
Q ss_pred hhhcCCCCcccCCCccCCCCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc
Q 000497 584 EQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM 663 (1460)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~ 663 (1460)
.+ + .++-..++++|+.|+|.+. .+-+.-||++|++||++.|+|.||||||||++++.|.++
T Consensus 314 ~q----~----------~p~~~~lelrnvrfay~~~-----~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~ 374 (546)
T COG4615 314 PQ----A----------FPDWKTLELRNVRFAYQDN-----AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQ 374 (546)
T ss_pred CC----c----------CCcccceeeeeeeeccCcc-----cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccC
Confidence 11 0 1123568999999999753 244889999999999999999999999999999999999
Q ss_pred CCCeEEEEeCc-------------EEEEcCCCCCCCccHHHHHccCCC-CChHHHHHHHHHhcchHHHhhccCCCccccc
Q 000497 664 LTHGSIHASGS-------------IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIG 729 (1460)
Q Consensus 664 ~~~G~i~~~~~-------------i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg 729 (1460)
|++|+|.++|+ ++-|.-|-|||+.+ +.++. .+++...+-++.-.+....+ +.+|.-+
T Consensus 375 PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~l-----l~~e~~as~q~i~~~LqrLel~~kts-l~d~~fs--- 445 (546)
T COG4615 375 PQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQL-----LGPEGKASPQLIEKWLQRLELAHKTS-LNDGRFS--- 445 (546)
T ss_pred CCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhh-----hCCccCCChHHHHHHHHHHHHhhhhc-ccCCccc---
Confidence 99999999983 23344444554432 22222 34555555555444443322 2222221
Q ss_pred CCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeC
Q 000497 730 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 809 (1460)
Q Consensus 730 ~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~ 809 (1460)
...||-|||.|+|+--|+.-+.|||+|||=-+-=||+-+++..+..+-.-...|||++.|||+-.+...|||++.+++
T Consensus 446 --~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~ 523 (546)
T COG4615 446 --NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRN 523 (546)
T ss_pred --ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhc
Confidence 247999999999999999999999999999999999998888776442224469999999999999999999999999
Q ss_pred CeEEEe
Q 000497 810 GQVKWI 815 (1460)
Q Consensus 810 G~i~~~ 815 (1460)
|++++.
T Consensus 524 G~~~e~ 529 (546)
T COG4615 524 GQLSEL 529 (546)
T ss_pred Cceeec
Confidence 999864
No 370
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=369.79 Aligned_cols=216 Identities=25% Similarity=0.397 Sum_probs=183.0
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC--CCceEEECCEeCCCCChHH-Hhc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNIINTPVRD-LRG 1299 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~--~~G~I~IDG~di~~i~~~~-lR~ 1299 (1460)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+... .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 5899999999963 4699999999999999999999999999999999999996 8999999999998777654 467
Q ss_pred ccEEEeCCCccCCc-cHHHhcCcCCC------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000497 1300 RFAVVPQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1372 (1460)
Q Consensus 1300 ~i~iVpQdp~lf~g-TIR~NLdp~~~------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1372 (1460)
+++||||+|.+|+. |+++|+.+... .+.++..+ .+.+.++.+|++........+||||||||++||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~a 157 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL-----RAQKLLAQLKLDINPATPVGNLGLGQQQLVEIAKA 157 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH-----HHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHH
Confidence 89999999988875 99999975421 11111111 23344555577655566667899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1373 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1373 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
|+.+|+||||||||++||+++...+.+.|++.. ++.|||+|||+++.+.. ||||++|++|++++.|+++++..
T Consensus 158 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 232 (506)
T PRK13549 158 LNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTE 232 (506)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCH
Confidence 999999999999999999999999999998763 47899999999999875 89999999999999999988743
No 371
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=4.2e-35 Score=367.20 Aligned_cols=215 Identities=24% Similarity=0.390 Sum_probs=183.7
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHh-ccc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLR-GRF 1301 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR-~~i 1301 (1460)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+....+ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999964 4699999999999999999999999999999999999999999999999999887776655 469
Q ss_pred EEEeCCCccCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1380 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1380 (1460)
+|+||++.+|++ |+++|+....... .+..+ .+.+.++.+|++........+||||||||++|||||+++|+||
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~-~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p~ll 162 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKR-QASMQ-----KMKQLLAALGCQLDLDSSAGSLEVADRQIVEILRGLMRDSRIL 162 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccc-hHHHH-----HHHHHHHHcCCCccccCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999998876 9999997543211 11111 1233444556665555666689999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1381 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1381 lLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 163 lLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 163 ILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 9999999999999999999998763 47899999999999865 89999999999999999998865
No 372
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.5e-35 Score=350.86 Aligned_cols=202 Identities=29% Similarity=0.393 Sum_probs=169.5
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------c
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 674 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 674 (1460)
.++++|+++.|.. ..+|+|+||++++||+++|+|||||||||||++|+|..+|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ 77 (353)
T TIGR03265 4 YLSIDNIRKRFGA------FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRD 77 (353)
T ss_pred EEEEEEEEEEeCC------eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 4789999999853 2359999999999999999999999999999999999999999999986 4
Q ss_pred EEEEcCCCCCCC-ccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000497 675 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 746 (1460)
Q Consensus 675 i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 746 (1460)
+|||+|++-+|. .||+|||.|+.. .+. ++.+++++..+|+... .....+|||||||||+||
T Consensus 78 ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRvaLA 146 (353)
T TIGR03265 78 YGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSE-----------RKYPGQLSGGQQQRVALA 146 (353)
T ss_pred EEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchh-----------hCChhhCCHHHHHHHHHH
Confidence 999999999986 599999998742 222 3455566665554332 345669999999999999
Q ss_pred HHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000497 747 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 824 (1460)
Q Consensus 747 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 824 (1460)
|||+.+|+++|||||||+||+.+.+++.+.+..-....+.|+|+|||+.+.+. .||+|++|++|++++.|+++++...
T Consensus 147 RaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 147 RALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999998877632111123789999999999865 5999999999999999999998754
No 373
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-35 Score=323.00 Aligned_cols=218 Identities=27% Similarity=0.375 Sum_probs=184.6
Q ss_pred cEEEEEEEEEecCCC----------------------CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCc
Q 000497 1223 LIEFQNVTMRYKPSL----------------------PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1280 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~----------------------~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G 1280 (1460)
.|+++||+.-++.+. ..-++|+||+|+.||...|.|=||||||||+.++.|++||++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 588899988875431 1237899999999999999999999999999999999999999
Q ss_pred eEEECCEeCCCCChHHHh----cccEEEeCCCccCCc-cHHHhcCcCCCC---ChH----HHHHHHHHhcHHHHHHhCCC
Q 000497 1281 QILVDGLNIINTPVRDLR----GRFAVVPQSPFLFEG-SLRDNLDPFHMN---DDL----KIWSVLEKCHVKEEVEAVGL 1348 (1460)
Q Consensus 1281 ~I~IDG~di~~i~~~~lR----~~i~iVpQdp~lf~g-TIR~NLdp~~~~---sd~----ei~~aL~~~~l~~~i~~lgL 1348 (1460)
+|++||.||..++..+|| +++++|.|.--||+- ||.+|..++-+. ..+ ...++|+.+||
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL--------- 154 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGL--------- 154 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCc---------
Confidence 999999999999988774 579999999999986 999999876432 222 23344455544
Q ss_pred chhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCE
Q 000497 1349 ETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDE 1425 (1460)
Q Consensus 1349 dt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~Dr 1425 (1460)
+..-..-...||||+|||+.|||||..+|+||++|||.|+||+--...+|+-+.+.- -++|+++|||+|++... -||
T Consensus 155 ~~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~r 234 (386)
T COG4175 155 EGYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDR 234 (386)
T ss_pred hhhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccce
Confidence 444444566799999999999999999999999999999999999999998886543 37999999999998655 699
Q ss_pred EEEEeCCeEEEEcChhHHhccCCc
Q 000497 1426 ILILDHGHLVEQGNPQTLLQDECS 1449 (1460)
Q Consensus 1426 IlVl~~G~IvE~G~p~eLl~~~~~ 1449 (1460)
|..|++|+|+..|+|+|++.+|.-
T Consensus 235 IaimkdG~ivQ~Gtp~eIl~~PAn 258 (386)
T COG4175 235 IAIMKDGEIVQVGTPEEILLNPAN 258 (386)
T ss_pred EEEecCCeEEEeCCHHHHHcCccH
Confidence 999999999999999999998863
No 374
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=340.97 Aligned_cols=204 Identities=29% Similarity=0.401 Sum_probs=170.4
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|++++|+.... .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (279)
T PRK13650 4 IIEVKNLTFKYKEDQE---KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIR 80 (279)
T ss_pred eEEEEeEEEEcCCCCc---CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHH
Confidence 4789999999964211 2369999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCC--CCCccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000497 674 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 743 (1460)
Q Consensus 674 -~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv 743 (1460)
.++|++|+|. ++..||+|||.|+.. .++ ++..++++..+|+...+ ....+||||||||+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qrv 149 (279)
T PRK13650 81 HKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKE-----------REPARLSGGQKQRV 149 (279)
T ss_pred hhceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHH
Confidence 4899999984 566799999998732 232 34566777777764433 33458999999999
Q ss_pred HHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHH
Q 000497 744 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 822 (1460)
Q Consensus 744 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~ 822 (1460)
+||||++.+|+++||||||++||+.+.+.+++. +..... .|+|+|++||+++.+..||+|++|++|+++..|+++++.
T Consensus 150 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 150 AIAGAVAMRPKIIILDEATSMLDPEGRLELIKT-IKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999998888775 333122 378999999999998889999999999999999998875
Q ss_pred hc
Q 000497 823 VS 824 (1460)
Q Consensus 823 ~~ 824 (1460)
..
T Consensus 229 ~~ 230 (279)
T PRK13650 229 SR 230 (279)
T ss_pred cC
Confidence 43
No 375
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=341.71 Aligned_cols=207 Identities=28% Similarity=0.441 Sum_probs=169.8
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|+.... ..+++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13637 2 SIKIENLTHIYMEGTP-FEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSD 80 (287)
T ss_pred EEEEEEEEEECCCCCc-cccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHH
Confidence 4789999999964211 113469999999999999999999999999999999999999999998865
Q ss_pred ---cEEEEcCCC--CCCCccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHH
Q 000497 674 ---SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 741 (1460)
Q Consensus 674 ---~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkq 741 (1460)
.+|||+|+| .+++.|++|||.|+.. .++ ++..++++.++|.. .+........|||||||
T Consensus 81 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------~~~~~~~~~~LSgGq~q 151 (287)
T PRK13637 81 IRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDY---------EDYKDKSPFELSGGQKR 151 (287)
T ss_pred HhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCc---------hhhccCCcccCCHHHHH
Confidence 389999998 5788999999998642 233 23455666666641 12234566799999999
Q ss_pred HHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHH
Q 000497 742 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 819 (1460)
Q Consensus 742 Rv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 819 (1460)
|++|||||+.+|+++||||||++||+.+.+++.+. +..... .++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 152 rv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~ 230 (287)
T PRK13637 152 RVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNK-IKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPR 230 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999988876 333122 3789999999999875 59999999999999999998
Q ss_pred HHHh
Q 000497 820 DLAV 823 (1460)
Q Consensus 820 ~l~~ 823 (1460)
++..
T Consensus 231 ~~~~ 234 (287)
T PRK13637 231 EVFK 234 (287)
T ss_pred HHHh
Confidence 8754
No 376
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=342.36 Aligned_cols=205 Identities=25% Similarity=0.381 Sum_probs=170.1
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|+++.|+.... ..+++|+|+||+|++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 2 i~~~~v~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 2 IKFEKVNYTYQPNSP-FASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred EEEEEEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 678999999964321 112469999999999999999999999999999999999999999998876
Q ss_pred ----cEEEEcCCC--CCCCccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000497 674 ----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 740 (1460)
Q Consensus 674 ----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQk 740 (1460)
.++||+|+| .+++.||.|||.|+.. .++ +++.++++..+|..++ ......+||||||
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~~~~LSgGqk 150 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF----------WEKSPFELSGGQM 150 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------ccCCcccCCHHHH
Confidence 379999998 7888999999998742 222 3455666666664332 2345679999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHH
Q 000497 741 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 819 (1460)
Q Consensus 741 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 819 (1460)
||++||||++.+|+++||||||++||+.+.+.+.+. +..-..+++|+|++||+++.+. .||+|++|++|+++++|+++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~ 229 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQL-FESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPS 229 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999988875 3321224789999999999885 59999999999999999999
Q ss_pred HHHh
Q 000497 820 DLAV 823 (1460)
Q Consensus 820 ~l~~ 823 (1460)
++..
T Consensus 230 ~~~~ 233 (288)
T PRK13643 230 DVFQ 233 (288)
T ss_pred HHHc
Confidence 8754
No 377
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=342.41 Aligned_cols=206 Identities=27% Similarity=0.414 Sum_probs=170.4
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|++++|+.... ...++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (290)
T PRK13634 2 DITFQKVEHRYQYKTP-FERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKL 80 (290)
T ss_pred EEEEEEEEEEECCCCc-ccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 3789999999964221 113469999999999999999999999999999999999999999998876
Q ss_pred -----cEEEEcCCC--CCCCccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000497 674 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 739 (1460)
Q Consensus 674 -----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQ 739 (1460)
.||||+|+| .+++.||+|||.|+.. .++ ++..++++.++|..++. ......|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~----------~~~~~~LSgGq 150 (290)
T PRK13634 81 KPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL----------ARSPFELSGGQ 150 (290)
T ss_pred HHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh----------hCCcccCCHHH
Confidence 389999998 5888899999998632 222 34566777777754332 34456899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecC
Q 000497 740 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGS 817 (1460)
Q Consensus 740 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~ 817 (1460)
|||++|||||+.+|+++||||||++||+.+.+.+++. +..... .|.|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 151 ~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~-L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~ 229 (290)
T PRK13634 151 MRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEM-FYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGT 229 (290)
T ss_pred HHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999988876 322112 3789999999999876 599999999999999999
Q ss_pred HHHHHh
Q 000497 818 SADLAV 823 (1460)
Q Consensus 818 ~~~l~~ 823 (1460)
++++..
T Consensus 230 ~~~~~~ 235 (290)
T PRK13634 230 PREIFA 235 (290)
T ss_pred HHHHhc
Confidence 988754
No 378
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.4e-35 Score=302.13 Aligned_cols=193 Identities=25% Similarity=0.379 Sum_probs=167.6
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
|+|+|++-.|+.. .++|+|+||+|++||++.++||||||||||+|+|.++..|++|+|.++|
T Consensus 2 I~f~~V~k~Y~~g-----~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~ 76 (223)
T COG2884 2 IRFENVSKAYPGG-----REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPF 76 (223)
T ss_pred eeehhhhhhcCCC-----chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccch
Confidence 6788999888753 2359999999999999999999999999999999999999999999876
Q ss_pred ---cEEEEcCCCCCCC-ccHHHHHccCCC---CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 ---SIAYVPQVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
+||+|+|+--|.. -||.||+.|... .. +++..++++..+|.+....+|. .||||||||
T Consensus 77 LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQR 145 (223)
T COG2884 77 LRRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQR 145 (223)
T ss_pred hhheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHH
Confidence 6999999998665 599999998643 22 3466678888899988888886 899999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 816 (1460)
|+||||+..+|++||-||||-+|||..+..|++- +..--..|.||+++||+.+.+.. --+++.+++|+++...
T Consensus 146 vaIARAiV~~P~vLlADEPTGNLDp~~s~~im~l-feeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 146 VAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRL-FEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHHHHccCCCeEeecCCCCCCChHHHHHHHHH-HHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 9999999999999999999999999999999875 32224468899999999999986 5689999999998653
No 379
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.5e-35 Score=325.48 Aligned_cols=194 Identities=25% Similarity=0.336 Sum_probs=164.7
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 789999999964 46999999999999999999999999999999999999999999999999997654 456788999
Q ss_pred EeCCCccCC-ccHHHhcCcCCC----CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1304 VPQSPFLFE-GSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1304 VpQdp~lf~-gTIR~NLdp~~~----~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
+||++.+++ .|++||+..... .+++++.++++..+ ++.........||+|||||++||||++++|+
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~g---------l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 149 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVG---------LAGFEDVPVRQLSAGQQRRVALARLWLTRAP 149 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcC---------CHHHhhCChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999998886 599999964321 12334444555444 4433444556899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhc-CEEEEE
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNM-DEILIL 1429 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~-DrIlVl 1429 (1460)
+++|||||++||+++.+.+.+.|++.. +++|+|++||+++.+..| +|++++
T Consensus 150 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 150 LWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 999999999999999999999998763 478999999999999776 788776
No 380
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=5.3e-35 Score=310.50 Aligned_cols=159 Identities=33% Similarity=0.518 Sum_probs=148.0
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh-HHHhcccE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRFA 1302 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i~ 1302 (1460)
|+++|++++|+. .++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. +..|++++
T Consensus 1 l~~~~l~~~~~~--~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGG--VKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 578999999964 369999999999999999999999999999999999999999999999999988875 45678899
Q ss_pred EEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000497 1303 VVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1382 (1460)
Q Consensus 1303 iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1382 (1460)
++|| ||+|||||++||||++++|++++|
T Consensus 79 ~~~q----------------------------------------------------LS~G~~qrl~laral~~~p~illl 106 (163)
T cd03216 79 MVYQ----------------------------------------------------LSVGERQMVEIARALARNARLLIL 106 (163)
T ss_pred EEEe----------------------------------------------------cCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999 999999999999999999999999
Q ss_pred eccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEE
Q 000497 1383 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVE 1436 (1460)
Q Consensus 1383 DEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE 1436 (1460)
||||++||.++.+.+.+.|++.. ++.|+|++||+++.+.. |||+++|++|++++
T Consensus 107 DEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 107 DEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred ECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999998764 47899999999998865 89999999999975
No 381
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.5e-35 Score=347.83 Aligned_cols=201 Identities=32% Similarity=0.439 Sum_probs=167.7
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------c
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 674 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 674 (1460)
.++++|+++.|.. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 2 ~L~i~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ 75 (353)
T PRK10851 2 SIEIANIKKSFGR------TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRK 75 (353)
T ss_pred EEEEEEEEEEeCC------eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCC
Confidence 3678999998853 2359999999999999999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCCc-cHHHHHccCCC-------CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 675 IAYVPQVPWILSG-TIRDNILFGKN-------YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 675 i~y~~Q~p~l~~~-ti~~nI~~g~~-------~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
++||+|++.++.. ||+|||.|+.. .+. ++..++++..+|.... ......||||||||
T Consensus 76 i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LSgGq~QR 144 (353)
T PRK10851 76 VGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLA-----------DRYPAQLSGGQKQR 144 (353)
T ss_pred EEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHH
Confidence 9999999999875 99999998743 121 2444556665554322 34456999999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHH
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 820 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 820 (1460)
|+|||||+.+|+++|||||||+||+.+.+.+.+. +.... ..+.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 145 valArAL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~ 223 (353)
T PRK10851 145 VALARALAVEPQILLLDEPFGALDAQVRKELRRW-LRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQ 223 (353)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999888776 33212 236899999999998664 99999999999999999999
Q ss_pred HHhc
Q 000497 821 LAVS 824 (1460)
Q Consensus 821 l~~~ 824 (1460)
+...
T Consensus 224 i~~~ 227 (353)
T PRK10851 224 VWRE 227 (353)
T ss_pred HHhC
Confidence 8653
No 382
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-35 Score=368.07 Aligned_cols=216 Identities=19% Similarity=0.304 Sum_probs=182.8
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hccc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1301 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1301 (1460)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.... |+++
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 4899999999963 369999999999999999999999999999999999999999999999999988776543 4679
Q ss_pred EEEeCCCccCCc-cHHHhcCcCCC----C------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFHM----N------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1370 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~~----~------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1370 (1460)
+||||++.+|.+ |+++|+..... . +.++.. ..+.+.++.+|++...+....+||||||||++||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~ia 157 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMR-----VRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIA 157 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHH-----HHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHH
Confidence 999999988876 99999964311 0 111111 1223445555776555556668999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1371 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1371 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
|||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 158 KTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999998753 47899999999999875 89999999999999999988754
No 383
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-35 Score=332.10 Aligned_cols=199 Identities=33% Similarity=0.456 Sum_probs=164.5
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------c
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 674 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 674 (1460)
.++++|+++.|+. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 2 ~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 75 (239)
T cd03296 2 SIEVRNVSKRFGD------FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERN 75 (239)
T ss_pred EEEEEeEEEEECC------EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccc
Confidence 3678999999853 2359999999999999999999999999999999999999999999875 4
Q ss_pred EEEEcCCCCCCC-ccHHHHHccCCCC-------Ch----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 675 IAYVPQVPWILS-GTIRDNILFGKNY-------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 675 i~y~~Q~p~l~~-~ti~~nI~~g~~~-------~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
++|++|+|.++. .|++||+.++... +. ++..+.++.+++... ......+||||||||
T Consensus 76 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr 144 (239)
T cd03296 76 VGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWL-----------ADRYPAQLSGGQRQR 144 (239)
T ss_pred eEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhh-----------hhcChhhCCHHHHHH
Confidence 899999999886 5999999876321 21 233444555555332 234456899999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHH
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 820 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 820 (1460)
++||||++.+|+++||||||++||+++.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 145 l~la~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 223 (239)
T cd03296 145 VALARALAVEPKVLLLDEPFGALDAKVRKELRRW-LRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDE 223 (239)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHH
Confidence 9999999999999999999999999999988775 332122 37899999999998764 99999999999999999888
Q ss_pred HH
Q 000497 821 LA 822 (1460)
Q Consensus 821 l~ 822 (1460)
+.
T Consensus 224 ~~ 225 (239)
T cd03296 224 VY 225 (239)
T ss_pred Hh
Confidence 74
No 384
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.6e-35 Score=366.61 Aligned_cols=216 Identities=19% Similarity=0.312 Sum_probs=181.4
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHH-Hhccc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1301 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1301 (1460)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999963 46999999999999999999999999999999999999999999999999997665544 46789
Q ss_pred EEEeCCCccCCc-cHHHhcCcCCC-------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~~-------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1373 (1460)
+|+||+|.+|+. |+++|+.+... .+..+..+ .+.+.++.+|++........+||||||||++|||||
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 156 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA-----EADKLLARLNLRFSSDKLVGELSIGEQQMVEIAKVL 156 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH-----HHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHH
Confidence 999999988875 99999975321 11111111 123445555776555555668999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1374 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1374 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
+.+|++|||||||++||+++.+.+.+.|++.. ++.|||+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (501)
T PRK10762 157 SFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE 230 (501)
T ss_pred hcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH
Confidence 99999999999999999999999999998753 47899999999999875 79999999999999999887643
No 385
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=340.74 Aligned_cols=206 Identities=23% Similarity=0.382 Sum_probs=168.1
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|+.... ...++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (286)
T PRK13646 2 TIRFDNVSYTYQKGTP-YEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYI 80 (286)
T ss_pred EEEEEEEEEEECCCCc-cccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 4789999999964221 113469999999999999999999999999999999999999999998875
Q ss_pred -----cEEEEcCCC--CCCCccHHHHHccCCC---CChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000497 674 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 739 (1460)
Q Consensus 674 -----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQ 739 (1460)
.||||+|+| .+++.|++|||.|+.. ++.+ +..+.++.++|+.+ .....+.+|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq 150 (286)
T PRK13646 81 RPVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRD----------VMSQSPFQMSGGQ 150 (286)
T ss_pred HHHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHH
Confidence 379999998 6888899999998632 2332 23344445554322 1235667999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecC
Q 000497 740 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGS 817 (1460)
Q Consensus 740 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~ 817 (1460)
|||++||||++.+|+++||||||++||+.+.+.+.+. +.... ..|.|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 151 ~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~ 229 (286)
T PRK13646 151 MRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRL-LKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTS 229 (286)
T ss_pred HHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999988775 32211 24789999999999875 599999999999999999
Q ss_pred HHHHHh
Q 000497 818 SADLAV 823 (1460)
Q Consensus 818 ~~~l~~ 823 (1460)
++++..
T Consensus 230 ~~~~~~ 235 (286)
T PRK13646 230 PKELFK 235 (286)
T ss_pred HHHHHh
Confidence 988754
No 386
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.9e-35 Score=323.00 Aligned_cols=189 Identities=29% Similarity=0.447 Sum_probs=161.6
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|+++.|+... .++++|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~~~----~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 5 GEIEVENLSVRYAPDL----PPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CeEEEEEEEEEeCCCC----cccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 4688999999986421 2359999999999999999999999999999999999999999999875
Q ss_pred --cEEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHcc
Q 000497 674 --SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 751 (1460)
Q Consensus 674 --~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~ 751 (1460)
.++||+|+|.++++|++|||.+...+++++..+.++ ++++...||||||||++||||++.
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 499999999999999999998755444333222221 345678999999999999999999
Q ss_pred CCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecC
Q 000497 752 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 817 (1460)
Q Consensus 752 ~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 817 (1460)
+|+++||||||++||+.+.+.+.+. +.. ..+++|+|++||+.+.+..+|++++|++|++.+.|+
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKT-IRE-EFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 9999999999999999999887776 333 345789999999999988899999999999988775
No 387
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.4e-35 Score=331.64 Aligned_cols=197 Identities=28% Similarity=0.396 Sum_probs=162.4
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCc-----cCCCeEEEEeC--------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM-----MLTHGSIHASG-------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~-----~~~~G~i~~~~-------- 673 (1460)
++++|+++.|.. +++|+|+||++++||+++|+||||||||||+++|+|.+ +|++|+|.++|
T Consensus 1 i~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~ 74 (227)
T cd03260 1 IELRDLNVYYGD------KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDV 74 (227)
T ss_pred CEEEEEEEEcCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcch
Confidence 357889998853 23599999999999999999999999999999999999 99999998865
Q ss_pred -------cEEEEcCCCCCCCccHHHHHccCCCC----C----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccH
Q 000497 674 -------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 738 (1460)
Q Consensus 674 -------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGG 738 (1460)
.++|++|++.+++.|++||+.++... + +++..++++.+++...+...++ +.+||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG 145 (227)
T cd03260 75 DVLELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGG 145 (227)
T ss_pred HHHHHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHH
Confidence 38999999998888999999875321 1 2344556666666543332211 4689999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecC
Q 000497 739 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGS 817 (1460)
Q Consensus 739 QkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~ 817 (1460)
||||++||||++.+|+++||||||++||+.+.+.+.+. +.. ..+++|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 146 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~ 223 (227)
T cd03260 146 QQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEEL-IAE-LKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGP 223 (227)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecC
Confidence 99999999999999999999999999999999988876 333 223389999999999876 599999999999999988
Q ss_pred HHH
Q 000497 818 SAD 820 (1460)
Q Consensus 818 ~~~ 820 (1460)
+++
T Consensus 224 ~~~ 226 (227)
T cd03260 224 TEQ 226 (227)
T ss_pred ccc
Confidence 654
No 388
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.8e-35 Score=348.99 Aligned_cols=202 Identities=27% Similarity=0.383 Sum_probs=170.1
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC--eEEEEeC---------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH--GSIHASG--------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~--G~i~~~~--------- 673 (1460)
..++++|+++.|.. ..+|+|+||++++|++++|+|||||||||||++|+|+.+|++ |+|.++|
T Consensus 4 ~~l~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~ 77 (362)
T TIGR03258 4 GGIRIDHLRVAYGA------NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH 77 (362)
T ss_pred eEEEEEEEEEEECC------eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH
Confidence 45889999999853 235999999999999999999999999999999999999999 9999876
Q ss_pred --cEEEEcCCCCCCCc-cHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000497 674 --SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 743 (1460)
Q Consensus 674 --~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv 743 (1460)
.|+||+|++.+|.. ||+|||.|+.. .++ ++..++++..+|+...+ ....+|||||||||
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~-----------~~~~~LSgGq~QRv 146 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAA-----------HLPAQLSGGMQQRI 146 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhh-----------CChhhCCHHHHHHH
Confidence 49999999999865 99999998642 222 34556666666654333 34458999999999
Q ss_pred HHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccC--CceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHH
Q 000497 744 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML--QKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSAD 820 (1460)
Q Consensus 744 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~--~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~ 820 (1460)
+|||||..+|+++|||||||+||+...+++.+.+ ..-..+ +.|+|+|||+.+.+. .||+|++|++|++++.|++++
T Consensus 147 aLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l-~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~ 225 (362)
T TIGR03258 147 AIARAIAIEPDVLLLDEPLSALDANIRANMREEI-AALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQA 225 (362)
T ss_pred HHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHH-HHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999888763 221222 689999999999865 599999999999999999999
Q ss_pred HHhc
Q 000497 821 LAVS 824 (1460)
Q Consensus 821 l~~~ 824 (1460)
+...
T Consensus 226 ~~~~ 229 (362)
T TIGR03258 226 LYDA 229 (362)
T ss_pred HHhC
Confidence 8654
No 389
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-35 Score=350.76 Aligned_cols=200 Identities=28% Similarity=0.407 Sum_probs=168.3
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------c
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 674 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 674 (1460)
.++++|+++.|.. ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 3 ~l~i~~l~~~~~~------~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~ 76 (369)
T PRK11000 3 SVTLRNVTKAYGD------VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERG 76 (369)
T ss_pred EEEEEEEEEEeCC------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCC
Confidence 3788999999853 2359999999999999999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCCc-cHHHHHccCCC---CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000497 675 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 746 (1460)
Q Consensus 675 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 746 (1460)
|+||+|++.++.. ||+|||.|+.. .+ +++..++++.++++...+ ....+|||||||||+||
T Consensus 77 i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~-----------~~~~~LSgGq~QRvaLA 145 (369)
T PRK11000 77 VGMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLD-----------RKPKALSGGQRQRVAIG 145 (369)
T ss_pred EEEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhc-----------CChhhCCHHHHHHHHHH
Confidence 9999999998865 99999998642 22 234566677776654333 34458999999999999
Q ss_pred HHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHh
Q 000497 747 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 747 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
|||+.+|+++|||||||+||+...+.+.+. +..... .+.|+|+|||+++.+. .||+|++|++|++.+.|+++++..
T Consensus 146 raL~~~P~lLLLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~ 223 (369)
T PRK11000 146 RTLVAEPSVFLLDEPLSNLDAALRVQMRIE-ISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYH 223 (369)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999888775 322122 3789999999999876 599999999999999999998864
No 390
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-35 Score=333.02 Aligned_cols=203 Identities=22% Similarity=0.293 Sum_probs=170.3
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc---CCCeEEEEeC---------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM---LTHGSIHASG--------- 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~---~~~G~i~~~~--------- 673 (1460)
.++++|+++.|+. +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|
T Consensus 2 ~~~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~ 75 (246)
T PRK14269 2 IAKTTNLNLFYGK------KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVV 75 (246)
T ss_pred ceeeeeeEEEECC------EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHH
Confidence 4678999999852 235999999999999999999999999999999999974 6899999876
Q ss_pred ----cEEEEcCCCCCCCccHHHHHccCCCC---------ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000497 674 ----SIAYVPQVPWILSGTIRDNILFGKNY---------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 740 (1460)
Q Consensus 674 ----~i~y~~Q~p~l~~~ti~~nI~~g~~~---------~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQk 740 (1460)
.++|++|+|.+++.|++||+.++... ++++..++++.+++...+.. ...+++.+||||||
T Consensus 76 ~~~~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 148 (246)
T PRK14269 76 ALRKNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQ 148 (246)
T ss_pred HHhhhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHH
Confidence 48999999999999999999875311 12245567777777554432 23556779999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHH
Q 000497 741 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 819 (1460)
Q Consensus 741 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 819 (1460)
||++||||++++|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 149 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 226 (246)
T PRK14269 149 QRLCIARALAIKPKLLLLDEPTSALDPISSGVIEEL-LKE-LSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESK 226 (246)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999998888776 433 335789999999999886 59999999999999999988
Q ss_pred HHHh
Q 000497 820 DLAV 823 (1460)
Q Consensus 820 ~l~~ 823 (1460)
++..
T Consensus 227 ~~~~ 230 (246)
T PRK14269 227 EFFE 230 (246)
T ss_pred HHHh
Confidence 8753
No 391
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=6.9e-35 Score=327.65 Aligned_cols=205 Identities=27% Similarity=0.444 Sum_probs=174.2
Q ss_pred CCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC---------
Q 000497 603 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------- 673 (1460)
Q Consensus 603 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------- 673 (1460)
....++++|+++.|+.... .++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~ 84 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPD---TLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHK 84 (226)
T ss_pred cCceEEEEEEEEEeCCCCC---CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHH
Confidence 4467899999999964321 2369999999999999999999999999999999999999999999876
Q ss_pred ----cEEEEcCCCCCCCccHHHHHccCCCC-ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHH
Q 000497 674 ----SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 748 (1460)
Q Consensus 674 ----~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARa 748 (1460)
.++|++|+|.+++.|++||+.++... +...+.+..+...++.-++.++.|.++..+.+..+|||||||||+||||
T Consensus 85 ~~~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~lara 164 (226)
T cd03248 85 YLHSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARA 164 (226)
T ss_pred HHHhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHH
Confidence 38999999999999999999876432 2223333344455667788888888888899999999999999999999
Q ss_pred HccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeE
Q 000497 749 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQV 812 (1460)
Q Consensus 749 ly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i 812 (1460)
++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||+|++|++|++
T Consensus 165 l~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 165 LIRNPQVLILDEATSALDAESEQQVQQA-LYD-WPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999988776 333 3446899999999999988999999999874
No 392
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-35 Score=340.74 Aligned_cols=206 Identities=22% Similarity=0.333 Sum_probs=168.8
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|+.... ...++|+|+||+|++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (305)
T PRK13651 2 QIKVKNIVKIFNKKLP-TELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEK 80 (305)
T ss_pred EEEEEEEEEEECCCCC-ccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccc
Confidence 3789999999964321 112469999999999999999999999999999999999999999998752
Q ss_pred -------------------------cEEEEcCCC--CCCCccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhh
Q 000497 674 -------------------------SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISL 719 (1460)
Q Consensus 674 -------------------------~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~ 719 (1460)
.||||+|+| .+++.||+|||.|+.. .++ ++..++++.++|..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-- 158 (305)
T PRK13651 81 EKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESY-- 158 (305)
T ss_pred cccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh--
Confidence 379999987 5788899999998742 232 3445566666664322
Q ss_pred ccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh
Q 000497 720 MVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS 799 (1460)
Q Consensus 720 ~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~ 799 (1460)
......+||||||||++|||||+.+|+++||||||++||+...+.+.+. +......|+|+|++||+++.+.
T Consensus 159 --------~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivtHd~~~~~ 229 (305)
T PRK13651 159 --------LQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEI-FDNLNKQGKTIILVTHDLDNVL 229 (305)
T ss_pred --------hhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeeCHHHHH
Confidence 2355679999999999999999999999999999999999998888775 3321234789999999999875
Q ss_pred -cCCEEEEEeCCeEEEecCHHHHHh
Q 000497 800 -AADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 800 -~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
.||+|++|++|++++.|+++++..
T Consensus 230 ~~adrv~vl~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 230 EWTKRTIFFKDGKIIKDGDTYDILS 254 (305)
T ss_pred HhCCEEEEEECCEEEEECCHHHHhc
Confidence 599999999999999999988754
No 393
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-35 Score=338.06 Aligned_cols=199 Identities=29% Similarity=0.388 Sum_probs=167.9
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|+.. .++|+|+||++++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~-----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 78 (274)
T PRK13647 4 IIEVEDLHFRYKDG-----TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVR 78 (274)
T ss_pred eEEEEEEEEEeCCC-----CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHH
Confidence 47899999998531 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCC--CCCCccHHHHHccCCC---CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000497 674 -SIAYVPQVP--WILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 743 (1460)
Q Consensus 674 -~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv 743 (1460)
.++|++|+| .+++.||+||+.|+.. .+ ++++.++++.++|....... ...||||||||+
T Consensus 79 ~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LSgG~~qrv 147 (274)
T PRK13647 79 SKVGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKP-----------PYHLSYGQKKRV 147 (274)
T ss_pred hhEEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCC-----------hhhCCHHHHHHH
Confidence 489999998 5788899999998632 22 23556677777776444333 348999999999
Q ss_pred HHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHH
Q 000497 744 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADL 821 (1460)
Q Consensus 744 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l 821 (1460)
+||||+..+|+++||||||++||+.+.+.+++. +.....+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 148 ~laraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 148 AIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEI-LDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999999999988776 3331234789999999999985 5999999999999999998654
No 394
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-35 Score=327.44 Aligned_cols=191 Identities=30% Similarity=0.406 Sum_probs=158.1
Q ss_pred EEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------cEE
Q 000497 608 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SIA 676 (1460)
Q Consensus 608 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i~ 676 (1460)
+++|+++.|.. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++
T Consensus 2 ~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~ 75 (213)
T cd03259 2 ELKGLSKTYGS------VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIG 75 (213)
T ss_pred eeeeeEEEeCC------eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEE
Confidence 57888998853 2359999999999999999999999999999999999999999998875 489
Q ss_pred EEcCCCCCCC-ccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHH
Q 000497 677 YVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 748 (1460)
Q Consensus 677 y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARa 748 (1460)
|++|+|.++. .|++||+.++.. .+. ++..++++.+++...+. ....+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLN-----------RYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------cChhhCCHHHHHHHHHHHH
Confidence 9999998875 599999987532 222 23455666666654333 3445899999999999999
Q ss_pred HccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000497 749 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 749 ly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 816 (1460)
+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREE-LKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999988876 332112 37899999999998765 9999999999998754
No 395
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=8.9e-35 Score=320.21 Aligned_cols=194 Identities=23% Similarity=0.336 Sum_probs=164.3
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 478999999964 36999999999999999999999999999999999999999999999999987643 567889999
Q ss_pred EeCCCccC-CccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000497 1304 VPQSPFLF-EGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1381 (1460)
Q Consensus 1304 VpQdp~lf-~gTIR~NLdp~~~-~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1381 (1460)
+||++.++ ..|+++|+..+.. ..++++.++++..++.+. ......+||+|||||++||||++++|+++|
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~---------~~~~~~~LS~G~~qrl~laral~~~p~lll 148 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGF---------EDRPVAQLSAGQQRRVALARLLLSGRPLWI 148 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhh---------hcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999876 4799999965432 344556666666655432 233445799999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEE
Q 000497 1382 LDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILIL 1429 (1460)
Q Consensus 1382 LDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlVl 1429 (1460)
|||||++||+++.+.+.+.|++.. +++|+|+|||+...+. .||+++++
T Consensus 149 lDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 149 LDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 999999999999999999998754 4899999999877655 57999877
No 396
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.8e-35 Score=332.07 Aligned_cols=198 Identities=25% Similarity=0.360 Sum_probs=162.9
Q ss_pred EEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--------------
Q 000497 608 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 673 (1460)
Q Consensus 608 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 673 (1460)
+++|+++.|+. . ++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (236)
T cd03219 2 EVRGLTKRFGG---L---VALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARL 75 (236)
T ss_pred eeeeeEEEECC---E---EEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhc
Confidence 57888888852 2 359999999999999999999999999999999999999999998865
Q ss_pred cEEEEcCCCCCCCc-cHHHHHccCCCC-------------Ch----HHHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000497 674 SIAYVPQVPWILSG-TIRDNILFGKNY-------------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 735 (1460)
Q Consensus 674 ~i~y~~Q~p~l~~~-ti~~nI~~g~~~-------------~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~L 735 (1460)
.++|++|+|.++.+ |++|||.++... +. ++..+.++..+++ ...+....+|
T Consensus 76 ~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~L 144 (236)
T cd03219 76 GIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLA-----------DLADRPAGEL 144 (236)
T ss_pred CEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCcc-----------chhhCChhhC
Confidence 38999999998876 999999875321 11 1233334443332 2345567799
Q ss_pred ccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEE
Q 000497 736 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKW 814 (1460)
Q Consensus 736 SGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~ 814 (1460)
|||||||++||||+..+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++.+
T Consensus 145 SgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~ 223 (236)
T cd03219 145 SYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAEL-IRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIA 223 (236)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEe
Confidence 99999999999999999999999999999999999988876 33212257899999999999865 99999999999999
Q ss_pred ecCHHHHHh
Q 000497 815 IGSSADLAV 823 (1460)
Q Consensus 815 ~g~~~~l~~ 823 (1460)
.|+++++..
T Consensus 224 ~~~~~~~~~ 232 (236)
T cd03219 224 EGTPDEVRN 232 (236)
T ss_pred ecCHHHhcc
Confidence 999888743
No 397
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.1e-33 Score=377.50 Aligned_cols=211 Identities=24% Similarity=0.288 Sum_probs=154.1
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHH---------HHhccCCCCC----c----eEEEC
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILN---------ALFRLTPICG----G----QILVD 1285 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~---------~L~rl~~~~~----G----~I~ID 1285 (1460)
.++++|++. ..|+|+|++|++||.+||.|+||||||||++ .|.|...+.. + -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 588888762 2799999999999999999999999999999 4445332211 1 24666
Q ss_pred CEeCCCCCh----------HHHhc---------c-----cEEEeCC------------------C---------------
Q 000497 1286 GLNIINTPV----------RDLRG---------R-----FAVVPQS------------------P--------------- 1308 (1460)
Q Consensus 1286 G~di~~i~~----------~~lR~---------~-----i~iVpQd------------------p--------------- 1308 (1460)
..+|..-+. +++|+ + ..+..|. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 665543222 14441 1 1112221 0
Q ss_pred -----ccCCc-cHHHhcCcCCC-----C-ChHHHHHHHHHhcHHHHHHhCCCchh-hhcCCCCCChhHHHHHHHHHHHc-
Q 000497 1309 -----FLFEG-SLRDNLDPFHM-----N-DDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLICLARALL- 1374 (1460)
Q Consensus 1309 -----~lf~g-TIR~NLdp~~~-----~-sd~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQrl~LARALL- 1374 (1460)
+.+.+ ||.|||++... . +.+++.+.+ +.++.+||+.. .+....+||||||||++|||||+
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l------~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~ 826 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKI------HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLA 826 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHH------HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhh
Confidence 13334 77777765321 0 112222222 23444588765 68888899999999999999998
Q ss_pred --cCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEe------CCeEEEEcChhHHhc
Q 000497 1375 --KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILD------HGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1375 --r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl~------~G~IvE~G~p~eLl~ 1445 (1460)
++|+++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|+ +|++++.|+|+++..
T Consensus 827 ~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtpeel~~ 906 (1809)
T PRK00635 827 PSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPEELIH 906 (1809)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCHHHHHh
Confidence 5999999999999999999999999998764 5889999999999998899999996 799999999999986
Q ss_pred c
Q 000497 1446 D 1446 (1460)
Q Consensus 1446 ~ 1446 (1460)
.
T Consensus 907 ~ 907 (1809)
T PRK00635 907 L 907 (1809)
T ss_pred c
Confidence 3
No 398
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-35 Score=332.95 Aligned_cols=204 Identities=24% Similarity=0.332 Sum_probs=168.8
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEeC------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------ 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~------ 673 (1460)
..++++|+++.|.. . .+|+|+||++++||+++|+||||||||||+++|+|..+ |++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~---~---~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 78 (253)
T PRK14242 5 PKMEARGLSFFYGD---F---QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDP 78 (253)
T ss_pred cEEEEeeeEEEECC---e---eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEcccc
Confidence 45899999999853 2 35999999999999999999999999999999999864 5899998765
Q ss_pred ---------cEEEEcCCCCCCCccHHHHHccCCC---C-C----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000497 674 ---------SIAYVPQVPWILSGTIRDNILFGKN---Y-D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 736 (1460)
Q Consensus 674 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~---~-~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LS 736 (1460)
.++|++|++.+++.|++||+.++.. . + +++.++.++.+++...+. +..+....+||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS 151 (253)
T PRK14242 79 HVDVVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLS 151 (253)
T ss_pred ccCHHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCC
Confidence 3899999999998999999987521 1 1 234455566666643322 23456678999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEe
Q 000497 737 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWI 815 (1460)
Q Consensus 737 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~ 815 (1460)
|||||||+||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++.
T Consensus 152 gGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~ 229 (253)
T PRK14242 152 GGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEEL-IHE-LKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEV 229 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999888776 333 344689999999999986 4999999999999999
Q ss_pred cCHHHHHh
Q 000497 816 GSSADLAV 823 (1460)
Q Consensus 816 g~~~~l~~ 823 (1460)
|+++++..
T Consensus 230 g~~~~~~~ 237 (253)
T PRK14242 230 GPTEQIFT 237 (253)
T ss_pred CCHHHHHc
Confidence 99888753
No 399
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=328.58 Aligned_cols=201 Identities=26% Similarity=0.392 Sum_probs=168.7
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|.. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 76 (241)
T PRK14250 3 EIEFKEVSYSSFG---K---EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLR 76 (241)
T ss_pred eEEEEeEEEEeCC---e---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhh
Confidence 3788999998752 2 359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCCCCCccHHHHHccCCCC---ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHH
Q 000497 674 -SIAYVPQVPWILSGTIRDNILFGKNY---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 749 (1460)
Q Consensus 674 -~i~y~~Q~p~l~~~ti~~nI~~g~~~---~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARal 749 (1460)
.++|++|+|.+++.|++||+.++... +.++..+.++.+++..+. ......+||||||||++||||+
T Consensus 77 ~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrl~la~al 146 (241)
T PRK14250 77 RKIGMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY----------ATRDVKNLSGGEAQRVSIARTL 146 (241)
T ss_pred hcEEEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH----------hhCCcccCCHHHHHHHHHHHHH
Confidence 38999999999989999999876432 234556667777664322 2345668999999999999999
Q ss_pred ccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHh
Q 000497 750 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 750 y~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
+.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 147 ANNPEVLLLDEPTSALDPTSTEIIEEL-IVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 999999999999999999998887775 332122 37899999999999775 99999999999999999888753
No 400
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-35 Score=327.08 Aligned_cols=197 Identities=21% Similarity=0.276 Sum_probs=163.0
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------c
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 674 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 674 (1460)
++++|+++.|.. +++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (220)
T cd03265 1 IEVENLVKKYGD------FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRR 74 (220)
T ss_pred CEEEEEEEEECC------EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhc
Confidence 357888888852 2359999999999999999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCCc-cHHHHHccCC---CCC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000497 675 IAYVPQVPWILSG-TIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 746 (1460)
Q Consensus 675 i~y~~Q~p~l~~~-ti~~nI~~g~---~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 746 (1460)
++|++|++.++.. |++||+.++. ..+ +++..+.++.+++....+ ....+||||||||++||
T Consensus 75 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr~~la 143 (220)
T cd03265 75 IGIVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAAD-----------RLVKTYSGGMRRRLEIA 143 (220)
T ss_pred EEEecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CChhhCCHHHHHHHHHH
Confidence 8999999988775 9999998642 122 234566677777654332 23458999999999999
Q ss_pred HHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccC-CceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHH
Q 000497 747 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML-QKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 821 (1460)
Q Consensus 747 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~-~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 821 (1460)
||++.+|+++||||||++||+++.+.+.+. +.....+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 144 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 144 RSLVHRPEVLFLDEPTIGLDPQTRAHVWEY-IEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999888776 3321222 7899999999999875 999999999999999887664
No 401
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.5e-35 Score=327.61 Aligned_cols=190 Identities=25% Similarity=0.402 Sum_probs=157.4
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|+++.|+.. . +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (216)
T TIGR00960 2 IRFEQVSKAYPGG-H---QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPF 77 (216)
T ss_pred eEEEEEEEEecCC-C---eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHH
Confidence 5789999998532 1 2359999999999999999999999999999999999999999998875
Q ss_pred ---cEEEEcCCCCCCC-ccHHHHHccCCC---CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 ---SIAYVPQVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
.++|++|+|.++. .|++||+.++.. .+ +++..++++.+++..... ....+||||||||
T Consensus 78 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qr 146 (216)
T TIGR00960 78 LRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAH-----------ALPMQLSGGEQQR 146 (216)
T ss_pred HHHhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHH
Confidence 3899999999876 599999987521 11 235566677777654333 2335899999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeE
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 812 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i 812 (1460)
++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++
T Consensus 147 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 147 VAIARAIVHKPPLLLADEPTGNLDPELSRDIMRL-FEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999988876 33212347899999999999875 999999999974
No 402
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-35 Score=346.53 Aligned_cols=204 Identities=26% Similarity=0.362 Sum_probs=169.2
Q ss_pred CceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC----------
Q 000497 604 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 673 (1460)
Q Consensus 604 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 673 (1460)
...++++|+++.|.. ..+|+|+||++++|++++|+|||||||||||++|+|..+|++|+|.++|
T Consensus 17 ~~~l~l~~v~~~~~~------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~ 90 (377)
T PRK11607 17 TPLLEIRNLTKSFDG------QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQ 90 (377)
T ss_pred CceEEEEeEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHH
Confidence 446899999999852 2359999999999999999999999999999999999999999999986
Q ss_pred -cEEEEcCCCCCCCc-cHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHH
Q 000497 674 -SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 744 (1460)
Q Consensus 674 -~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~ 744 (1460)
.+|||+|++-+|.. ||+|||.|+.. .+. ++..++++..++.... .....+|||||||||+
T Consensus 91 r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRVa 159 (377)
T PRK11607 91 RPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFA-----------KRKPHQLSGGQRQRVA 159 (377)
T ss_pred CCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 48999999999975 99999998742 222 2445556666665332 3344589999999999
Q ss_pred HHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHh
Q 000497 745 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 745 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
|||||+.+|+++|||||||+||+...+.+.+.+..-....+.|+|+|||+.+.+. .||+|++|++|++++.|+++++..
T Consensus 160 LARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~ 239 (377)
T PRK11607 160 LARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYE 239 (377)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHh
Confidence 9999999999999999999999999888776532111223789999999999865 599999999999999999999865
Q ss_pred c
Q 000497 824 S 824 (1460)
Q Consensus 824 ~ 824 (1460)
.
T Consensus 240 ~ 240 (377)
T PRK11607 240 H 240 (377)
T ss_pred C
Confidence 3
No 403
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=363.21 Aligned_cols=211 Identities=24% Similarity=0.384 Sum_probs=177.7
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh-HHHhccc
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRF 1301 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i 1301 (1460)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. +.+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999963 369999999999999999999999999999999999999999999999999976543 4567899
Q ss_pred EEEeCCCccCCc-cHHHhcCcCCC------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1374 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~~------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1374 (1460)
+|+||+|.+|++ |+++|+..... ....+.. ..+.+.++.+|++........+||||||||++|||||+
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~laral~ 156 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLN-----YEAREQLEHLGVDIDPDTPLKYLSIGQRQMVEIAKALA 156 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHH-----HHHHHHHHHcCCCCCcCCchhhCCHHHHHHHHHHHHHH
Confidence 999999998876 99999975321 1111211 12334555557765555566689999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcCh
Q 000497 1375 KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1440 (1460)
Q Consensus 1375 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1440 (1460)
++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.+++
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 157 RNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred hCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 9999999999999999999999999998763 47899999999999876 899999999999877654
No 404
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=334.37 Aligned_cols=202 Identities=26% Similarity=0.394 Sum_probs=171.0
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|... . +++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~-~---~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~ 80 (279)
T PRK13635 5 IIRVEHISFRYPDA-A---TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVR 80 (279)
T ss_pred eEEEEEEEEEeCCC-C---ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHh
Confidence 58899999999532 1 2369999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCC--CCCCccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000497 674 -SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 743 (1460)
Q Consensus 674 -~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv 743 (1460)
.++|++|+| .+++.||+|||.++.. .++ ++..++++.++|+..+... ...||||||||+
T Consensus 81 ~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qrv 149 (279)
T PRK13635 81 RQVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNRE-----------PHRLSGGQKQRV 149 (279)
T ss_pred hheEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCC-----------cccCCHHHHHHH
Confidence 489999998 4667899999988632 222 3456677777776655443 348999999999
Q ss_pred HHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHH
Q 000497 744 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 822 (1460)
Q Consensus 744 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~ 822 (1460)
+||||++.+|+++||||||++||+.+.+.+++. +..... .+.|+|++||+++.+..||+|++|++|++++.|+.+++.
T Consensus 150 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13635 150 AIAGVLALQPDIIILDEATSMLDPRGRREVLET-VRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIF 228 (279)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999988876 333122 378999999999998889999999999999999988875
Q ss_pred h
Q 000497 823 V 823 (1460)
Q Consensus 823 ~ 823 (1460)
.
T Consensus 229 ~ 229 (279)
T PRK13635 229 K 229 (279)
T ss_pred c
Confidence 4
No 405
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=4.3e-34 Score=323.35 Aligned_cols=177 Identities=21% Similarity=0.307 Sum_probs=133.7
Q ss_pred EEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCc-cCCccHHHhcCcCCC-
Q 000497 1247 TIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPF-LFEGSLRDNLDPFHM- 1324 (1460)
Q Consensus 1247 ~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~-lf~gTIR~NLdp~~~- 1324 (1460)
+|..||.+||+||||-||||++++|.|.++|++|+ ..++ +++|=||--. -|+|||++-|.--..
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~~----------~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EEDL----------KVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Cccc----------eEeecceeecCCCCCcHHHHHHHhhhh
Confidence 45567899999999999999999999999999998 2222 6888899532 388999987632111
Q ss_pred -CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHH
Q 000497 1325 -NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISS 1403 (1460)
Q Consensus 1325 -~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~ 1403 (1460)
+.+.-.+ .+.++.+.|+..+...-.+|||||.||+++|-||.|++++.+||||+|.||.+-.-.+-++||+
T Consensus 429 ~~~~s~~~--------~ei~~pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakvIRR 500 (591)
T COG1245 429 AFGSSYFK--------TEIVKPLNLEDLLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKVIRR 500 (591)
T ss_pred hcccchhH--------HhhcCccchHHHHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHHHHH
Confidence 1111111 1233344666666666668999999999999999999999999999999999999888899987
Q ss_pred hc--CCcEEEEeccChhhHhh-cCEEEEEeC--CeEEEEcChhHHhc
Q 000497 1404 EC--KGMTVITIAHRISTVLN-MDEILILDH--GHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1404 ~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~--G~IvE~G~p~eLl~ 1445 (1460)
.. .++|.++|-|++-.+.. +||++|.+. |+=-....|..+.+
T Consensus 501 ~~e~~~kta~vVdHDi~~~dyvsDr~ivF~GePg~~g~a~~P~~mr~ 547 (591)
T COG1245 501 FIENNEKTALVVDHDIYMIDYVSDRLIVFEGEPGKHGHASPPMSMRE 547 (591)
T ss_pred HHhhcCceEEEEecceehhhhhhceEEEEecCCCccCcCCCCccHHH
Confidence 64 58899999999988764 699999974 32222344555543
No 406
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-35 Score=326.28 Aligned_cols=197 Identities=29% Similarity=0.372 Sum_probs=161.5
Q ss_pred EEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--------cEEEEc
Q 000497 608 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAYVP 679 (1460)
Q Consensus 608 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~y~~ 679 (1460)
+++|+++.|+... ..+++|+|+||++++|++++|+||||||||||+++|+|..+|++|+|.++| .++|++
T Consensus 2 ~~~~l~~~~~~~~--~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~ 79 (220)
T cd03293 2 EVRNVSKTYGGGG--GAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVF 79 (220)
T ss_pred eEEEEEEEcCCCC--cceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEe
Confidence 5788899886321 112469999999999999999999999999999999999999999999876 589999
Q ss_pred CCCCCCC-ccHHHHHccCCC---CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHcc
Q 000497 680 QVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 751 (1460)
Q Consensus 680 Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~ 751 (1460)
|+|.++. .|++||+.++.. .+ +++..+.++.+++...+. ....+||||||||++||||+++
T Consensus 80 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 80 QQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFEN-----------AYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred cccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCcccCCHHHHHHHHHHHHHHc
Confidence 9999887 699999987532 12 234556667766654433 3345899999999999999999
Q ss_pred CCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhh-cCCEEEEEe--CCeEEEecCH
Q 000497 752 GSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMD--KGQVKWIGSS 818 (1460)
Q Consensus 752 ~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~--~G~i~~~g~~ 818 (1460)
+|+++||||||++||+.+.+.+++. +.... ..++|+|++||+++.+. .||++++|+ +|++++.++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEE-LLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999988876 33211 23789999999999876 599999999 7999988764
No 407
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.7e-35 Score=323.11 Aligned_cols=188 Identities=27% Similarity=0.415 Sum_probs=157.3
Q ss_pred EEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC----------cEEEE
Q 000497 609 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------SIAYV 678 (1460)
Q Consensus 609 ~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------~i~y~ 678 (1460)
++|+++.|+.. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 2 ~~~l~~~~~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~ 76 (205)
T cd03226 2 IENISFSYKKG-----TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYV 76 (205)
T ss_pred cccEEEEeCCc-----CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEE
Confidence 46778877531 2359999999999999999999999999999999999999999999876 48999
Q ss_pred cCCC--CCCCccHHHHHccCCC---CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCC
Q 000497 679 PQVP--WILSGTIRDNILFGKN---YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 753 (1460)
Q Consensus 679 ~Q~p--~l~~~ti~~nI~~g~~---~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~ 753 (1460)
+|+| .+++.|++||+.++.. .++++..++++.+++....+. ....||||||||++||||+..+|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKER-----------HPLSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCC-----------CchhCCHHHHHHHHHHHHHHhCC
Confidence 9998 4678899999988642 233567778888877654333 33489999999999999999999
Q ss_pred CEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEE
Q 000497 754 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK 813 (1460)
Q Consensus 754 ~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~ 813 (1460)
+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGEL-IRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999998888775 33312357899999999999874 9999999999874
No 408
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=8.8e-35 Score=330.57 Aligned_cols=198 Identities=25% Similarity=0.389 Sum_probs=163.0
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|+++.|..+ +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-----~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (243)
T TIGR02315 2 LEVENLSKVYPNG-----KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRK 76 (243)
T ss_pred eEEEeeeeecCCC-----cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHH
Confidence 5688999988511 2359999999999999999999999999999999999999999998875
Q ss_pred ---cEEEEcCCCCCCC-ccHHHHHccCCC------------C---ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000497 674 ---SIAYVPQVPWILS-GTIRDNILFGKN------------Y---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 734 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~------------~---~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~ 734 (1460)
.++|++|++.++. .|++||+.++.. . +.++..++++.+++... ......+
T Consensus 77 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~ 145 (243)
T TIGR02315 77 LRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADK-----------AYQRADQ 145 (243)
T ss_pred HHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhh-----------hcCCccc
Confidence 2899999998876 599999987531 0 12234455555555432 2345679
Q ss_pred cccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeE
Q 000497 735 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQV 812 (1460)
Q Consensus 735 LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i 812 (1460)
||||||||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||++++|++|++
T Consensus 146 LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i 224 (243)
T TIGR02315 146 LSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDY-LKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEI 224 (243)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEE
Confidence 999999999999999999999999999999999998888775 332112 3789999999999985 5999999999999
Q ss_pred EEecCHHHH
Q 000497 813 KWIGSSADL 821 (1460)
Q Consensus 813 ~~~g~~~~l 821 (1460)
++.|+++++
T Consensus 225 ~~~~~~~~~ 233 (243)
T TIGR02315 225 VFDGAPSEL 233 (243)
T ss_pred EecCCHHHh
Confidence 999988775
No 409
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=368.72 Aligned_cols=221 Identities=24% Similarity=0.351 Sum_probs=180.0
Q ss_pred cEEEEEEEEEecCC--CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCC----------
Q 000497 1223 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII---------- 1290 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~---------- 1290 (1460)
.|+++|++++|+.. ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 69999999999632 236999999999999999999999999999999999999999999999998652
Q ss_pred CCChH---HHh-cccEEEeCCC--ccCCc-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCc---hhhhcCC
Q 000497 1291 NTPVR---DLR-GRFAVVPQSP--FLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESG 1356 (1460)
Q Consensus 1291 ~i~~~---~lR-~~i~iVpQdp--~lf~g-TIR~NLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLd---t~v~e~G 1356 (1460)
+.+.. .+| ++|++|+|+| .+++. |+++|+.... ..+..+..+ .+.+.++.+|++ .......
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~~ 166 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMV-----EAKRMLDQVRIPEAQTILSRYP 166 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHCCCCChhhHHhCCC
Confidence 22322 344 5799999999 57764 9999986421 112222111 122344445663 3456667
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-C-CcEEEEeccChhhHhh-cCEEEEEeCCe
Q 000497 1357 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-K-GMTVITIAHRISTVLN-MDEILILDHGH 1433 (1460)
Q Consensus 1357 ~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~-~~TvI~IaHrl~ti~~-~DrIlVl~~G~ 1433 (1460)
.+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. + ++|||+|||+++.+.. ||||++|++|+
T Consensus 167 ~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~ 246 (623)
T PRK10261 167 HQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGE 246 (623)
T ss_pred ccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCe
Confidence 7899999999999999999999999999999999999999999998864 3 7899999999999865 89999999999
Q ss_pred EEEEcChhHHhccCC
Q 000497 1434 LVEQGNPQTLLQDEC 1448 (1460)
Q Consensus 1434 IvE~G~p~eLl~~~~ 1448 (1460)
|++.|++++++.++.
T Consensus 247 i~~~g~~~~~~~~~~ 261 (623)
T PRK10261 247 AVETGSVEQIFHAPQ 261 (623)
T ss_pred ecccCCHHHhhcCCC
Confidence 999999999986543
No 410
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=331.10 Aligned_cols=204 Identities=26% Similarity=0.333 Sum_probs=168.1
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEeC------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------ 673 (1460)
..++++|+++.|.. . .+|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 79 (254)
T PRK14273 6 AIIETENLNLFYTD---F---KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSN 79 (254)
T ss_pred ceEEEeeeEEEeCC---c---eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccc
Confidence 46899999999853 2 259999999999999999999999999999999999987 489998754
Q ss_pred ---------cEEEEcCCCCCCCccHHHHHccCCC----CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000497 674 ---------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 736 (1460)
Q Consensus 674 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LS 736 (1460)
.++|++|+|.+++.||+|||.++.. .+. ++..++++.+++...+. .....++.+||
T Consensus 80 ~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS 152 (254)
T PRK14273 80 NFDILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK-------DKLNTNALSLS 152 (254)
T ss_pred cccHHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH-------HHHhCCcccCC
Confidence 3899999999998999999998642 121 23344555555532221 12344677999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEe
Q 000497 737 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 815 (1460)
Q Consensus 737 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 815 (1460)
||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 153 gG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~ 230 (254)
T PRK14273 153 GGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEEL-IIN-LKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEE 230 (254)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999988876 333 3456899999999999764 999999999999999
Q ss_pred cCHHHHHh
Q 000497 816 GSSADLAV 823 (1460)
Q Consensus 816 g~~~~l~~ 823 (1460)
|+++++..
T Consensus 231 g~~~~~~~ 238 (254)
T PRK14273 231 SSTDELFF 238 (254)
T ss_pred CCHHHHHh
Confidence 99988754
No 411
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-35 Score=363.10 Aligned_cols=212 Identities=24% Similarity=0.348 Sum_probs=179.3
Q ss_pred EEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCCh-HHHhcccEEE
Q 000497 1226 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRFAVV 1304 (1460)
Q Consensus 1226 f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i~iV 1304 (1460)
++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+|++++++
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999963 469999999999999999999999999999999999999999999999999976654 4567889999
Q ss_pred eCCCccCCc-cHHHhcCcCCC------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1305 PQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1305 pQdp~lf~g-TIR~NLdp~~~------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
||++.+|.. |+++|+..... .+.++.++ .+.+.++.+|++........+||||||||++|||||+++|
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lA~al~~~p 153 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----DTKAIFDELDIDIDPRAKVATLSVSQMQMIEIAKAFSYNA 153 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHH-----HHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHHhCC
Confidence 999987765 99999974321 12222221 2334455567776666667789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHh
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 154 ~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 154 KIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 9999999999999999999999998753 47899999999999875 8999999999999999988874
No 412
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=9e-35 Score=320.07 Aligned_cols=193 Identities=20% Similarity=0.249 Sum_probs=162.4
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999875 34577899999
Q ss_pred EeCCCccCC-ccHHHhcCcCCCC--ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000497 1304 VPQSPFLFE-GSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1380 (1460)
Q Consensus 1304 VpQdp~lf~-gTIR~NLdp~~~~--sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1380 (1460)
+||++.+++ .|+++|+...... .+.+ +.+.++.++++...+....+||+|||||++||||++++|++|
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~---------~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~~l 149 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVG---------ITELCRLFSLEHLIDYPCGLLSSGQKRQVALLRLWMSKAKLW 149 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHH---------HHHHHHHcCCchhhhCChhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 999998875 6999998643211 1122 334444445544444444579999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEE
Q 000497 1381 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILI 1428 (1460)
Q Consensus 1381 lLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlV 1428 (1460)
||||||++||..+.+.+.+.|++.. +++|+|++||+.+.+.+||.-++
T Consensus 150 ilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 150 LLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 9999999999999999999998753 58999999999999999986543
No 413
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-35 Score=335.33 Aligned_cols=186 Identities=30% Similarity=0.417 Sum_probs=156.9
Q ss_pred cceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------------cEEEEcCCCCCCC-c
Q 000497 626 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILS-G 687 (1460)
Q Consensus 626 ~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------------~i~y~~Q~p~l~~-~ 687 (1460)
.+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .++|++|+|.++. .
T Consensus 38 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 117 (269)
T cd03294 38 VGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHR 117 (269)
T ss_pred eEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCC
Confidence 359999999999999999999999999999999999999999998865 4899999999885 5
Q ss_pred cHHHHHccCCC---CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeC
Q 000497 688 TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDD 760 (1460)
Q Consensus 688 ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe 760 (1460)
|++|||.++.. ++ +++..++++.+++...+... ..+||||||||++||||++.+|+++||||
T Consensus 118 tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrv~lAral~~~p~illLDE 186 (269)
T cd03294 118 TVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKY-----------PDELSGGMQQRVGLARALAVDPDILLMDE 186 (269)
T ss_pred cHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------cccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99999987521 22 23456677777776544433 34899999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHhhcCc-ccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHh
Q 000497 761 VLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 761 ~~s~lD~~~~~~i~~~~~~~~-~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
||++||+.+.+.+.+.+ ... ...++|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 187 Pt~~LD~~~~~~l~~~l-~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 187 AFSALDPLIRREMQDEL-LRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred CCccCCHHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999888763 221 123789999999999875 499999999999999999988754
No 414
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-35 Score=344.74 Aligned_cols=204 Identities=28% Similarity=0.365 Sum_probs=167.2
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|++++|+.... ..++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~i~~l~~~y~~~~~--~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~ 79 (343)
T PRK11153 2 IELKNISKVFPQGGR--TIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRK 79 (343)
T ss_pred EEEEeEEEEeCCCCC--ceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHH
Confidence 578999999863211 12469999999999999999999999999999999999999999998875
Q ss_pred ---cEEEEcCCCCCCC-ccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
.|+|++|++.++. .|++|||.++.. .+. ++..+.++..++... ......+||||||||
T Consensus 80 ~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~qR 148 (343)
T PRK11153 80 ARRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDK-----------ADRYPAQLSGGQKQR 148 (343)
T ss_pred HhcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 4999999999886 599999987532 222 233445555555432 234556899999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCc-ccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHH
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 820 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~-~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 820 (1460)
++||||++.+|+++||||||++||+.+.+.+.+. +... ...++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 149 v~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~ 227 (343)
T PRK11153 149 VAIARALASNPKVLLCDEATSALDPATTRSILEL-LKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSE 227 (343)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999988876 3321 1237899999999999875 99999999999999999998
Q ss_pred HHhc
Q 000497 821 LAVS 824 (1460)
Q Consensus 821 l~~~ 824 (1460)
+...
T Consensus 228 ~~~~ 231 (343)
T PRK11153 228 VFSH 231 (343)
T ss_pred HHhC
Confidence 8643
No 415
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1e-34 Score=338.89 Aligned_cols=202 Identities=25% Similarity=0.374 Sum_probs=167.7
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|+++.|.. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~i~i~~l~k~~~~------~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~ 79 (306)
T PRK13537 6 APIDFRNVEKRYGD------KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHAR 79 (306)
T ss_pred ceEEEEeEEEEECC------eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHH
Confidence 46899999999852 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCCCCC-ccHHHHHcc-CCC--CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHH
Q 000497 674 -SIAYVPQVPWILS-GTIRDNILF-GKN--YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 744 (1460)
Q Consensus 674 -~i~y~~Q~p~l~~-~ti~~nI~~-g~~--~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~ 744 (1460)
.||||||+|.++. .|++||+.| +.. .+. ++..++++.+++.... .....+||||||||++
T Consensus 80 ~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 148 (306)
T PRK13537 80 QRVGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKA-----------DAKVGELSGGMKRRLT 148 (306)
T ss_pred hcEEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHh-----------cCchhhCCHHHHHHHH
Confidence 4999999998875 599999985 321 122 2334555555554322 2233589999999999
Q ss_pred HHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHh
Q 000497 745 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 745 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
||||+.++|++++|||||++||+...+.+++. +.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 149 LARALVNDPDVLVLDEPTTGLDPQARHLMWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999988876 33312347899999999999875 99999999999999999999865
Q ss_pred c
Q 000497 824 S 824 (1460)
Q Consensus 824 ~ 824 (1460)
.
T Consensus 228 ~ 228 (306)
T PRK13537 228 S 228 (306)
T ss_pred c
Confidence 4
No 416
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=334.08 Aligned_cols=200 Identities=27% Similarity=0.413 Sum_probs=167.0
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|++++|+.. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (274)
T PRK13644 2 IRLENVSYSYPDG-----TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIR 76 (274)
T ss_pred EEEEEEEEEcCCC-----CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHH
Confidence 5788999998531 2359999999999999999999999999999999999999999998875
Q ss_pred -cEEEEcCCCC--CCCccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000497 674 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 743 (1460)
Q Consensus 674 -~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv 743 (1460)
.++|++|+|. +++.|++|||.++.. .+. ++..++++.++++... ......||||||||+
T Consensus 77 ~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrv 145 (274)
T PRK13644 77 KLVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYR-----------HRSPKTLSGGQGQCV 145 (274)
T ss_pred hheEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHh-----------cCCcccCCHHHHHHH
Confidence 3899999986 567899999988632 222 3445556666665432 334568999999999
Q ss_pred HHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHh
Q 000497 744 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 744 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
+||||++.+|+++||||||++||+.+.+.+++. +.....+|.|+|++||+++.++.||+|++|++|++++.|+.+++..
T Consensus 146 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 146 ALAGILTMEPECLIFDEVTSMLDPDSGIAVLER-IKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999999888876 3321234789999999999998899999999999999999988753
No 417
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.3e-34 Score=392.32 Aligned_cols=220 Identities=24% Similarity=0.324 Sum_probs=190.7
Q ss_pred ccEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1222 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1222 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
..|+++|++++|+++..++++|+||++++||.+||+|+||||||||+++|.|+++|++|+|.++|.|+.. .....|+++
T Consensus 927 ~~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~I 1005 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSL 1005 (2272)
T ss_pred ceEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcE
Confidence 3699999999996444579999999999999999999999999999999999999999999999999975 566789999
Q ss_pred EEEeCCCccCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1302 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1302 ~iVpQdp~lf~g-TIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
+++||++.+|+. |++|||.++.. .+.++..+ ...+.++.+||+...+....+||||||||++|||||+.+|
T Consensus 1006 G~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~vgL~~~~~~~~~~LSGGqKQRLsLArALi~~P 1080 (2272)
T TIGR01257 1006 GMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDA 1080 (2272)
T ss_pred EEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 999999999975 99999975421 12222211 1234455557776677777899999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccC
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1447 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1447 (1460)
+||+||||||+||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++.+|.++-
T Consensus 1081 kVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~ 1151 (2272)
T TIGR01257 1081 KVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCF 1151 (2272)
T ss_pred CEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhc
Confidence 999999999999999999999999988779999999999999875 8999999999999999999997643
No 418
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3.9e-34 Score=360.64 Aligned_cols=221 Identities=24% Similarity=0.398 Sum_probs=179.8
Q ss_pred cEEEEEEEEEecCC--CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC-----CCceEEECCEeCCCCChH
Q 000497 1223 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i~~~ 1295 (1460)
.|+++|++++|+.+ ..++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 58999999999632 24699999999999999999999999999999999999986 799999999999877654
Q ss_pred H---Hh-cccEEEeCCCc--cCC-ccHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCch---hhhcCCCCCCh
Q 000497 1296 D---LR-GRFAVVPQSPF--LFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLET---FVKESGISFSV 1361 (1460)
Q Consensus 1296 ~---lR-~~i~iVpQdp~--lf~-gTIR~NLdp~----~~~sd~ei~~aL~~~~l~~~i~~lgLdt---~v~e~G~~LSg 1361 (1460)
. .| +++++|||+|. +++ -|+++|+... ...+.++.. ..+.+.++.+|++. .......+|||
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~~~~LSg 159 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAAR-----GEILNCLDRVGIRQAAKRLTDYPHQLSG 159 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHCCCCChHHHHhhCCcccCH
Confidence 3 34 57999999985 444 4899987521 112222111 11233444446643 23556678999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEc
Q 000497 1362 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1362 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1438 (1460)
|||||++|||||+.+|++||||||||+||+++.+.+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|
T Consensus 160 Ge~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g 239 (529)
T PRK15134 160 GERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVEQN 239 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999998753 37899999999999875 8999999999999999
Q ss_pred ChhHHhccCC
Q 000497 1439 NPQTLLQDEC 1448 (1460)
Q Consensus 1439 ~p~eLl~~~~ 1448 (1460)
++++++..+.
T Consensus 240 ~~~~~~~~~~ 249 (529)
T PRK15134 240 RAATLFSAPT 249 (529)
T ss_pred CHHHHhhCCC
Confidence 9999976543
No 419
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.3e-34 Score=321.23 Aligned_cols=192 Identities=24% Similarity=0.332 Sum_probs=161.4
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------cE
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 675 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 675 (1460)
++++|+++.|+. +++|+|+||++++|++++|+||||||||||+++|+|..+|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~~------~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i 74 (208)
T cd03268 1 LKTNDLTKTYGK------KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRI 74 (208)
T ss_pred CEEEEEEEEECC------eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhE
Confidence 357889998842 2359999999999999999999999999999999999999999999876 38
Q ss_pred EEEcCCCCCC-CccHHHHHccCC---CCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHcc
Q 000497 676 AYVPQVPWIL-SGTIRDNILFGK---NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 751 (1460)
Q Consensus 676 ~y~~Q~p~l~-~~ti~~nI~~g~---~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~ 751 (1460)
+||+|++.++ +.|++||+.++. ..++++.+++++..++..... .....|||||||||+||||++.
T Consensus 75 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al~~ 143 (208)
T cd03268 75 GALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAK-----------KKVKGFSLGMKQRLGIALALLG 143 (208)
T ss_pred EEecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHh-----------hhHhhCCHHHHHHHHHHHHHhc
Confidence 9999999877 469999998753 234556677777777754432 3456899999999999999999
Q ss_pred CCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000497 752 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 752 ~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 816 (1460)
+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 144 ~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 144 NPDLLILDEPTNGLDPDGIKELREL-ILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCCEEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999988775 33212257899999999999865 9999999999998754
No 420
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-34 Score=329.39 Aligned_cols=197 Identities=26% Similarity=0.379 Sum_probs=161.9
Q ss_pred EEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--------------
Q 000497 608 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 673 (1460)
Q Consensus 608 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 673 (1460)
+++|+++.|..+ +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (241)
T cd03256 2 EVENLSKTYPNG-----KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQL 76 (241)
T ss_pred EEeeEEEecCCc-----cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHH
Confidence 578888888531 2359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCC-ccHHHHHccCCC------------CC---hHHHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000497 674 --SIAYVPQVPWILS-GTIRDNILFGKN------------YD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 735 (1460)
Q Consensus 674 --~i~y~~Q~p~l~~-~ti~~nI~~g~~------------~~---~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~L 735 (1460)
.++|++|++.++. .|++||+.++.. .+ .++..++++..++.. .....+.+|
T Consensus 77 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~L 145 (241)
T cd03256 77 RRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-----------KAYQRADQL 145 (241)
T ss_pred HhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-----------hhCCCcccC
Confidence 3899999998776 699999986531 11 123334444444432 234566799
Q ss_pred ccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEE
Q 000497 736 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVK 813 (1460)
Q Consensus 736 SGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~ 813 (1460)
|||||||++||||++++|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||++++|++|+++
T Consensus 146 S~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~ 224 (241)
T cd03256 146 SGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDL-LKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIV 224 (241)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999988876 332112 3789999999999988 59999999999999
Q ss_pred EecCHHHH
Q 000497 814 WIGSSADL 821 (1460)
Q Consensus 814 ~~g~~~~l 821 (1460)
+.|+++++
T Consensus 225 ~~~~~~~~ 232 (241)
T cd03256 225 FDGPPAEL 232 (241)
T ss_pred eecCHHHh
Confidence 99998876
No 421
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.3e-34 Score=329.60 Aligned_cols=202 Identities=27% Similarity=0.375 Sum_probs=166.8
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC-----CeEEEEeC--------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT-----HGSIHASG-------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~-----~G~i~~~~-------- 673 (1460)
++++|+++.|.. . .+++|+||++++||+++|+|+||||||||+++|+|.++|+ +|+|.++|
T Consensus 2 l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~ 75 (247)
T TIGR00972 2 IEIENLNLFYGE---K---EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKI 75 (247)
T ss_pred EEEEEEEEEECC---e---eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEcccccc
Confidence 678999998853 1 3599999999999999999999999999999999999998 99998864
Q ss_pred -------cEEEEcCCCCCCCccHHHHHccCCC----CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccH
Q 000497 674 -------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 738 (1460)
Q Consensus 674 -------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGG 738 (1460)
.++|++|++++++.|++||+.++.. .+. ++..++++..++..+++ ........+||||
T Consensus 76 ~~~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG 148 (247)
T TIGR00972 76 DVVELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGG 148 (247)
T ss_pred chHHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHH
Confidence 3899999999999999999987532 121 23445555556543221 1234566799999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecC
Q 000497 739 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGS 817 (1460)
Q Consensus 739 QkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~ 817 (1460)
||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 149 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (247)
T TIGR00972 149 QQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEEL-IQE-LKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGP 226 (247)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999988775 433 334589999999999876 499999999999999999
Q ss_pred HHHHHh
Q 000497 818 SADLAV 823 (1460)
Q Consensus 818 ~~~l~~ 823 (1460)
++++..
T Consensus 227 ~~~~~~ 232 (247)
T TIGR00972 227 TEQIFT 232 (247)
T ss_pred HHHHHh
Confidence 888753
No 422
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=326.18 Aligned_cols=198 Identities=25% Similarity=0.341 Sum_probs=162.8
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|+.... ..++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~--~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 82 (233)
T PRK11629 5 LLQCDNLCKRYQEGSV--QTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKA 82 (233)
T ss_pred eEEEEeEEEEcCCCCc--ceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHH
Confidence 4789999999964211 12469999999999999999999999999999999999999999998875
Q ss_pred -----cEEEEcCCCCCCCc-cHHHHHccCC---CCCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000497 674 -----SIAYVPQVPWILSG-TIRDNILFGK---NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 740 (1460)
Q Consensus 674 -----~i~y~~Q~p~l~~~-ti~~nI~~g~---~~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQk 740 (1460)
.++|++|+|.++.. |++||+.++. ..++ ++..++++.+++... ......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~ 151 (233)
T PRK11629 83 ELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHR-----------ANHRPSELSGGER 151 (233)
T ss_pred HHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHH
Confidence 38999999988875 9999998742 1222 344556666655432 2345568999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecC
Q 000497 741 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 817 (1460)
Q Consensus 741 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 817 (1460)
||++||||++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+..+|++++|++|++++.|+
T Consensus 152 qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 152 QRVAIARALVNNPRLVLADEPTGNLDARNADSIFQL-LGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999888775 32211 24789999999999998889999999999998765
No 423
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.2e-34 Score=324.40 Aligned_cols=198 Identities=26% Similarity=0.440 Sum_probs=164.2
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------c
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 674 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 674 (1460)
++++|+++.|... . +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 1 l~~~~l~~~~~~~-~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (220)
T cd03263 1 LQIRNLTKTYKKG-T---KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQS 76 (220)
T ss_pred CEEEeeEEEeCCC-C---ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhh
Confidence 3578889888532 1 2359999999999999999999999999999999999999999998876 3
Q ss_pred EEEEcCCCCCC-CccHHHHHccCC---CCC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000497 675 IAYVPQVPWIL-SGTIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 746 (1460)
Q Consensus 675 i~y~~Q~p~l~-~~ti~~nI~~g~---~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 746 (1460)
++|++|+|.++ +.|++||+.++. ..+ +++..++++.+++.... .....+||||||||++||
T Consensus 77 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la 145 (220)
T cd03263 77 LGYCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-----------NKRARTLSGGMKRKLSLA 145 (220)
T ss_pred EEEecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hChhhhCCHHHHHHHHHH
Confidence 89999999888 569999998642 122 23456667777665332 233458999999999999
Q ss_pred HHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHH
Q 000497 747 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 821 (1460)
Q Consensus 747 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 821 (1460)
||+..+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 146 ~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 146 IALIGGPSVLLLDEPTSGLDPASRRAIWDL-ILE-VRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHHhcCCCEEEECCCCCCCCHHHHHHHHHH-HHH-HhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 999999999999999999999999988876 332 3346899999999999865 999999999999999988764
No 424
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.8e-34 Score=321.07 Aligned_cols=195 Identities=24% Similarity=0.315 Sum_probs=164.0
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.++++|++++|++ .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNE--EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCC--ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 5999999999964 3699999999999999999999999999999999999999999999999998752 3466799
Q ss_pred EEeCCCccCCc-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1303 VVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1303 iVpQdp~lf~g-TIR~NLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
++||+|.++++ |+++|+.... ...++.+.+.++. +|++........+||+|||||++||||++++|
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAI---------VGLAGYEDTLVRQLSAGQKKRLALARLWLSPA 156 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHH---------cCChhhccCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999887 9999985421 1112223333333 35544445555689999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeC
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDH 1431 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~ 1431 (1460)
++++|||||++||.++.+.+.+.+++.. +++|+|++||+++.+.+ ||++++++.
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 157 PLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999999998653 47899999999999865 799999875
No 425
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.7e-34 Score=326.38 Aligned_cols=200 Identities=25% Similarity=0.375 Sum_probs=164.8
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------c
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 674 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 674 (1460)
++++|++++|+. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~ 75 (236)
T TIGR03864 2 LEVAGLSFAYGA------RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALAR 75 (236)
T ss_pred EEEEeeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhh
Confidence 578899998852 2359999999999999999999999999999999999999999998876 3
Q ss_pred EEEEcCCCCC-CCccHHHHHccCCC---CChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000497 675 IAYVPQVPWI-LSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 746 (1460)
Q Consensus 675 i~y~~Q~p~l-~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 746 (1460)
++|++|++.+ ++.|++||+.++.. .+++ +..+.++..++. ........+||||||||++||
T Consensus 76 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrl~la 144 (236)
T TIGR03864 76 LGVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLA-----------ERADDKVRELNGGHRRRVEIA 144 (236)
T ss_pred EEEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------hhhcCChhhCCHHHHHHHHHH
Confidence 8999999987 46799999986532 2222 233344444443 224556679999999999999
Q ss_pred HHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhc
Q 000497 747 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 824 (1460)
Q Consensus 747 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~ 824 (1460)
||++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 145 ral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 145 RALLHRPALLLLDEPTVGLDPASRAAIVAH-VRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 999999999999999999999999988876 33211 247899999999999988999999999999999998887543
No 426
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=9e-35 Score=324.93 Aligned_cols=191 Identities=26% Similarity=0.369 Sum_probs=156.3
Q ss_pred EEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--------------
Q 000497 608 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 673 (1460)
Q Consensus 608 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 673 (1460)
+++|+++.|+.... .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~~~~--~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (218)
T cd03255 2 ELKNLSKTYGGGGE--KVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAF 79 (218)
T ss_pred eEeeeEEEecCCCc--ceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHH
Confidence 57889998853210 12469999999999999999999999999999999999999999998764
Q ss_pred ---cEEEEcCCCCCCCc-cHHHHHccCCCC---C----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 ---SIAYVPQVPWILSG-TIRDNILFGKNY---D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~---~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
.++|++|+|.++.. |++||+.++..+ + +++..++++..+++.. ......+||||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr 148 (218)
T cd03255 80 RRRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDR-----------LNHYPSELSGGQQQR 148 (218)
T ss_pred HhhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchh-----------hhcChhhcCHHHHHH
Confidence 38999999998876 999999875422 1 2345556666655433 234456899999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeE
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQV 812 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i 812 (1460)
++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+..||++++|++|++
T Consensus 149 v~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 149 VAIARALANDPKIILADEPTGNLDSETGKEVMEL-LRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 9999999999999999999999999998888776 332122 37899999999998888999999999974
No 427
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=330.09 Aligned_cols=206 Identities=25% Similarity=0.330 Sum_probs=170.4
Q ss_pred CCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEeC----
Q 000497 603 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---- 673 (1460)
Q Consensus 603 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~---- 673 (1460)
....++++|+++.|.. . ++|+|+||+|++|++++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 10 ~~~~l~~~~l~~~~~~---~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~ 83 (260)
T PRK10744 10 APSKIQVRNLNFYYGK---F---HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENIL 83 (260)
T ss_pred CCceEEEEEEEEEeCC---e---EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcc
Confidence 3456899999999853 2 35999999999999999999999999999999999986 5899998764
Q ss_pred -----------cEEEEcCCCCCCCccHHHHHccCCC----CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000497 674 -----------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 734 (1460)
Q Consensus 674 -----------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~ 734 (1460)
.++|++|+|.+++.|++||+.++.. .++ ++..++++..++..++. ...++...+
T Consensus 84 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 156 (260)
T PRK10744 84 TPKQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYS 156 (260)
T ss_pred ccccchHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCC
Confidence 4899999999988999999987532 232 33455566666543332 234567789
Q ss_pred cccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEE
Q 000497 735 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVK 813 (1460)
Q Consensus 735 LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~ 813 (1460)
||||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||++++|++|+++
T Consensus 157 LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 234 (260)
T PRK10744 157 LSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEEL-ITE-LKQDYTVVIVTHNMQQAARCSDYTAFMYLGELI 234 (260)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999988776 332 334689999999999886 49999999999999
Q ss_pred EecCHHHHHh
Q 000497 814 WIGSSADLAV 823 (1460)
Q Consensus 814 ~~g~~~~l~~ 823 (1460)
+.|+.+++..
T Consensus 235 ~~g~~~~~~~ 244 (260)
T PRK10744 235 EFGNTDTIFT 244 (260)
T ss_pred EeCCHHHHHh
Confidence 9999888753
No 428
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-35 Score=293.21 Aligned_cols=219 Identities=23% Similarity=0.394 Sum_probs=186.1
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCC----------
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT---------- 1292 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i---------- 1292 (1460)
.++++|+..+|++. .|||+||++.++|+.|.|+|-|||||||++.++.=+-.|+.|+|.++|..|...
T Consensus 6 ~l~v~dlHK~~G~~--eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~a 83 (256)
T COG4598 6 ALEVEDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPA 83 (256)
T ss_pred ceehhHHHhhcccc--hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeC
Confidence 68999999999764 599999999999999999999999999999999999999999999999888532
Q ss_pred ---ChHHHhcccEEEeCCCccCCc-cHHHhcC--cC---CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhH
Q 000497 1293 ---PVRDLRGRFAVVPQSPFLFEG-SLRDNLD--PF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1363 (1460)
Q Consensus 1293 ---~~~~lR~~i~iVpQdp~lf~g-TIR~NLd--p~---~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQ 1363 (1460)
.++.+|+++++|.|+--|.+- |+-||.- |- +...++.+..| ..++...|++..-..-...|||||
T Consensus 84 d~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~A------e~~L~kVGi~ek~~~YP~~LSGGQ 157 (256)
T COG4598 84 DKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERA------EKYLAKVGIAEKADAYPAHLSGGQ 157 (256)
T ss_pred CHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHH------HHHHHHhCchhhhhcCccccCchH
Confidence 256789999999999888875 9999973 32 12223323222 123333366666666677899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChh
Q 000497 1364 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQ 1441 (1460)
Q Consensus 1364 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~ 1441 (1460)
+||.+|||||.-+|+++++|||||+||++---.+.++|++.. .|+|+++|||.+...++ +..|+.|++|+|-|+|+|+
T Consensus 158 QQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P~ 237 (256)
T COG4598 158 QQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPPE 237 (256)
T ss_pred HHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCChH
Confidence 999999999999999999999999999999888888888765 59999999999999998 5999999999999999999
Q ss_pred HHhccCCc
Q 000497 1442 TLLQDECS 1449 (1460)
Q Consensus 1442 eLl~~~~~ 1449 (1460)
++..++.|
T Consensus 238 qvf~nP~S 245 (256)
T COG4598 238 QVFGNPQS 245 (256)
T ss_pred HHhcCCCC
Confidence 99999886
No 429
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=2e-33 Score=362.21 Aligned_cols=214 Identities=25% Similarity=0.342 Sum_probs=148.5
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHh------ccCC----C-----------CCce
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALF------RLTP----I-----------CGGQ 1281 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~------rl~~----~-----------~~G~ 1281 (1460)
.++++|++. ..|+|+||+|++||.+||+|+||||||||+.-.+ ++.+ | -.--
T Consensus 612 ~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (924)
T TIGR00630 612 FLTLKGARE-------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKV 684 (924)
T ss_pred eEEEEeCcc-------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCce
Confidence 488888862 2599999999999999999999999999998333 1111 1 1123
Q ss_pred EEECCEeCCCCC----------hHHHhcccEEEeC------CCccCCc--------------cHHHhcCcC---------
Q 000497 1282 ILVDGLNIINTP----------VRDLRGRFAVVPQ------SPFLFEG--------------SLRDNLDPF--------- 1322 (1460)
Q Consensus 1282 I~IDG~di~~i~----------~~~lR~~i~iVpQ------dp~lf~g--------------TIR~NLdp~--------- 1322 (1460)
|.||..+|..-+ .+.+|.-++=.|+ .+-.|+- .+.-++.+.
T Consensus 685 v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 764 (924)
T TIGR00630 685 IHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEV 764 (924)
T ss_pred EEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCC
Confidence 667766664332 1245555554443 1222321 111111000
Q ss_pred ---CCCChH-----------------HHHHHHHHh-------cHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHc
Q 000497 1323 ---HMNDDL-----------------KIWSVLEKC-------HVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1374 (1460)
Q Consensus 1323 ---~~~sd~-----------------ei~~aL~~~-------~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL 1374 (1460)
..+.++ .+.++++-. ...+.++.+||+. .+++....|||||+||++|||+|.
T Consensus 765 C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~ 844 (924)
T TIGR00630 765 CKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELS 844 (924)
T ss_pred cCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHh
Confidence 011111 111221111 1112233448875 478888899999999999999999
Q ss_pred c---CCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEE------eCCeEEEEcChhHH
Q 000497 1375 K---SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL------DHGHLVEQGNPQTL 1443 (1460)
Q Consensus 1375 r---~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl------~~G~IvE~G~p~eL 1443 (1460)
+ +|+++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+++
T Consensus 845 ~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 845 KRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIKTADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 7 589999999999999999999999998764 588999999999999999999999 79999999999986
No 430
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.9e-34 Score=360.55 Aligned_cols=212 Identities=19% Similarity=0.262 Sum_probs=179.9
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|++++
T Consensus 3 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 3 SLQISQGTFRLSD--TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred eEEEEeEEEEcCC--eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 3899999999964 35999999999999999999999999999999999999999999999999887777777888899
Q ss_pred EEeCCCcc--C-------CccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000497 1303 VVPQSPFL--F-------EGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1303 iVpQdp~l--f-------~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1373 (1460)
++||+|.+ + .-|+++|+.... ..++++.++++. +|++.........||||||||++|||||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~---------~~l~~~~~~~~~~LSgG~~qrv~la~al 150 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDEV-KDPARCEQLAQQ---------FGITALLDRRFKYLSTGETRKTLLCQAL 150 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccch-hHHHHHHHHHHH---------cCCHhhhhCCcccCCHHHHHHHHHHHHH
Confidence 99999753 2 348888875421 112233344443 4555445555668999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhcc
Q 000497 1374 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1374 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1446 (1460)
+++|++|+|||||++||+++.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 151 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 225 (490)
T PRK10938 151 MSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQ 225 (490)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcc
Confidence 99999999999999999999999999998764 37899999999999876 799999999999999999998764
No 431
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.6e-34 Score=360.31 Aligned_cols=214 Identities=24% Similarity=0.369 Sum_probs=178.4
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCC--CCceEEECCEeCCCCChHH-Hhcc
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNIINTPVRD-LRGR 1300 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~--~~G~I~IDG~di~~i~~~~-lR~~ 1300 (1460)
|+++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+... .|++
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999963 4699999999999999999999999999999999999987 7999999999998877654 4678
Q ss_pred cEEEeCCCccCCc-cHHHhcCcCCC-------CChHHHHHHHHHhcHHHHHHhCCCchhh-hcCCCCCChhHHHHHHHHH
Q 000497 1301 FAVVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFV-KESGISFSVGQRQLICLAR 1371 (1460)
Q Consensus 1301 i~iVpQdp~lf~g-TIR~NLdp~~~-------~sd~ei~~aL~~~~l~~~i~~lgLdt~v-~e~G~~LSgGQrQrl~LAR 1371 (1460)
++||||+|.+|+. |+++|+..... ...++.. ....+.++.+|++... ......||||||||++|||
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~ 154 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMY-----LRAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAK 154 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHH-----HHHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHH
Confidence 9999999988876 99999865321 1111111 1233445555665432 2335579999999999999
Q ss_pred HHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHh
Q 000497 1372 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1372 ALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
||+++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (500)
T TIGR02633 155 ALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS 229 (500)
T ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC
Confidence 9999999999999999999999999999998753 47899999999999876 8999999999999999987653
No 432
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-34 Score=325.63 Aligned_cols=202 Identities=28% Similarity=0.402 Sum_probs=164.6
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|+++.|..... ..++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~~~~l~~~~~~~~~--~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (233)
T cd03258 2 IELKNVSKVFGDTGG--KVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRK 79 (233)
T ss_pred eEEecceEEccCCCC--ceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHH
Confidence 578999999863210 11469999999999999999999999999999999999999999998764
Q ss_pred ---cEEEEcCCCCCCC-ccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
.++|++|+|.++. .|++||+.++.. .+. ++..+.++..++... ......+||||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr 148 (233)
T cd03258 80 ARRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDK-----------ADAYPAQLSGGQKQR 148 (233)
T ss_pred HHhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhcChhhCCHHHHHH
Confidence 3899999999886 599999987532 222 233445555555432 234456899999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHH
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 820 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 820 (1460)
++||||+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 149 v~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (233)
T cd03258 149 VGIARALANNPKVLLCDEATSALDPETTQSILAL-LRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEE 227 (233)
T ss_pred HHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 9999999999999999999999999999888776 332122 37899999999999865 99999999999999999887
Q ss_pred HH
Q 000497 821 LA 822 (1460)
Q Consensus 821 l~ 822 (1460)
+.
T Consensus 228 ~~ 229 (233)
T cd03258 228 VF 229 (233)
T ss_pred Hh
Confidence 64
No 433
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-34 Score=326.84 Aligned_cols=197 Identities=29% Similarity=0.364 Sum_probs=164.9
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--------cEE
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIA 676 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~ 676 (1460)
..++++|++++|.. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++
T Consensus 11 ~~l~i~~l~~~~~~------~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~ 84 (257)
T PRK11247 11 TPLLLNAVSKRYGE------RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTR 84 (257)
T ss_pred CcEEEEEEEEEECC------cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceE
Confidence 45899999999853 2359999999999999999999999999999999999999999998875 489
Q ss_pred EEcCCCCCCC-ccHHHHHccCCCC-ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCC
Q 000497 677 YVPQVPWILS-GTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSD 754 (1460)
Q Consensus 677 y~~Q~p~l~~-~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~ 754 (1460)
|++|+|.+++ .|++||+.++... .+++..++++..++.... .....+||||||||++||||+..+|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRA-----------NEWPAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHh-----------cCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999998877 5999999876321 234556667766665432 34556999999999999999999999
Q ss_pred EEEEeCCcccccHHHHHHHHHHhhcCc-ccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHH
Q 000497 755 IYMLDDVLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 819 (1460)
Q Consensus 755 illlDe~~s~lD~~~~~~i~~~~~~~~-~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 819 (1460)
++||||||++||+.+.+.+.+. +... ...++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDL-IESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999888775 3321 123689999999999875 59999999999999887643
No 434
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.8e-34 Score=323.55 Aligned_cols=199 Identities=27% Similarity=0.416 Sum_probs=161.3
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|+++.|.. . ++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 1 l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (222)
T cd03224 1 LEVENLNAGYGK---S---QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERAR 74 (222)
T ss_pred CEEeeEEeecCC---e---eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHh
Confidence 357888888752 2 359999999999999999999999999999999999999999998865
Q ss_pred -cEEEEcCCCCCCCc-cHHHHHccCCCCC--h---HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000497 674 -SIAYVPQVPWILSG-TIRDNILFGKNYD--P---QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 746 (1460)
Q Consensus 674 -~i~y~~Q~p~l~~~-ti~~nI~~g~~~~--~---~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 746 (1460)
.++|++|++.++.. |++||+.++.... . ++..++++... .+ ......+..+||||||||++||
T Consensus 75 ~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~------~l----~~~~~~~~~~LS~G~~qrv~la 144 (222)
T cd03224 75 AGIGYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP------RL----KERRKQLAGTLSGGEQQMLAIA 144 (222)
T ss_pred cCeEEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH------hh----hhhhhCchhhCCHHHHHHHHHH
Confidence 38999999988876 9999998764321 1 12223333321 11 1223456778999999999999
Q ss_pred HHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHH
Q 000497 747 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 822 (1460)
Q Consensus 747 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~ 822 (1460)
||+..+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++.+.|+.+++.
T Consensus 145 ral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 145 RALMSRPKLLLLDEPSEGLAPKIVEEIFEA-IRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHHhcCCCEEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 999999999999999999999999988876 33212257899999999998765 9999999999999999887764
No 435
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-34 Score=325.58 Aligned_cols=214 Identities=21% Similarity=0.247 Sum_probs=174.6
Q ss_pred cEEEEEEEEEecCC------------------CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEE
Q 000497 1223 LIEFQNVTMRYKPS------------------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILV 1284 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~------------------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~I 1284 (1460)
.|+++||+..|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~ 83 (264)
T PRK13546 4 SVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDR 83 (264)
T ss_pred eEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEE
Confidence 57888888777541 235899999999999999999999999999999999999999999999
Q ss_pred CCEeCCCCChHHHhcccEEEeCCCccCC-ccHHHhcCcC---CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCC
Q 000497 1285 DGLNIINTPVRDLRGRFAVVPQSPFLFE-GSLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFS 1360 (1460)
Q Consensus 1285 DG~di~~i~~~~lR~~i~iVpQdp~lf~-gTIR~NLdp~---~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LS 1360 (1460)
||. +++++|++.+++ .|+++|+... ...++++..+.. .+.++..+++..+......||
T Consensus 84 ~g~-------------~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~~~~LS 145 (264)
T PRK13546 84 NGE-------------VSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMT-----PKIIEFSELGEFIYQPVKKYS 145 (264)
T ss_pred CCE-------------EeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHcCCchhhcCCcccCC
Confidence 994 456788887664 4999998542 122333332221 122333367766777778999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEc
Q 000497 1361 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1361 gGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1438 (1460)
+|||||++||||++++|+||||||||++||+++.+.+.+.|.+.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~~G~i~~~g 225 (264)
T PRK13546 146 SGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEGGKLKDYG 225 (264)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999987653 48999999999999876 8999999999999999
Q ss_pred ChhHHhccCCcHHHHH
Q 000497 1439 NPQTLLQDECSVFSSF 1454 (1460)
Q Consensus 1439 ~p~eLl~~~~~~f~~l 1454 (1460)
++++++++....|+..
T Consensus 226 ~~~~~~~~~~~~~~~~ 241 (264)
T PRK13546 226 ELDDVLPKYEAFLNDF 241 (264)
T ss_pred CHHHHHHHhHHHHHHH
Confidence 9999988665444433
No 436
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.4e-34 Score=322.23 Aligned_cols=192 Identities=30% Similarity=0.427 Sum_probs=157.8
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------cE
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 675 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 675 (1460)
++++|+++.|.. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 i~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i 74 (213)
T cd03301 1 VELENVTKRFGN---V---TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDI 74 (213)
T ss_pred CEEEeeEEEECC---e---eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceE
Confidence 357888988853 2 359999999999999999999999999999999999999999999875 38
Q ss_pred EEEcCCCCCCC-ccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHH
Q 000497 676 AYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 747 (1460)
Q Consensus 676 ~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lAR 747 (1460)
+|++|++.++. .|++||+.++.. .++ ++..+.++..+++..+ .....+||||||||++|||
T Consensus 75 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr~~lar 143 (213)
T cd03301 75 AMVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLL-----------DRKPKQLSGGQRQRVALGR 143 (213)
T ss_pred EEEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHH-----------hCChhhCCHHHHHHHHHHH
Confidence 99999999885 599999987522 222 2334455555554332 3445689999999999999
Q ss_pred HHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000497 748 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 748 aly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 816 (1460)
|++.+|++++|||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 144 al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 144 AIVREPKVFLMDEPLSNLDAKLRVQMRAE-LKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999988876 332112 37899999999998765 9999999999998765
No 437
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-34 Score=316.01 Aligned_cols=196 Identities=27% Similarity=0.434 Sum_probs=168.0
Q ss_pred cEEEEEEEEEecCCC-------CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChH
Q 000497 1223 LIEFQNVTMRYKPSL-------PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1295 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~-------~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~ 1295 (1460)
-++++|++..|+... ..+++||||+|++||.+||||.|||||||+-++|+|+++|++|+|.++|.|+..++
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~-- 81 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLS-- 81 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcc--
Confidence 478999999996432 26899999999999999999999999999999999999999999999999987766
Q ss_pred HHhcccEEEeCCCccCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000497 1296 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1375 (1460)
Q Consensus 1296 ~lR~~i~iVpQdp~lf~gTIR~NLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1375 (1460)
....++++.+.|+++|+.+. ....-...||||||||++|||||.-
T Consensus 82 ---------------------------~~~~~~~v~elL~~Vgl~~~--------~~~ryPhelSGGQrQRi~IARALal 126 (268)
T COG4608 82 ---------------------------KEERRERVLELLEKVGLPEE--------FLYRYPHELSGGQRQRIGIARALAL 126 (268)
T ss_pred ---------------------------hhHHHHHHHHHHHHhCCCHH--------HhhcCCcccCchhhhhHHHHHHHhh
Confidence 11123456677777665432 2344556799999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHHH
Q 000497 1376 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1452 (1460)
Q Consensus 1376 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1452 (1460)
+|++++.|||||+||.-..+.|.+.+.+.- .+-|.++|||+++.++. ||||.||..|+|+|.|+-+++.+++...|-
T Consensus 127 ~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~~~~p~HpYT 206 (268)
T COG4608 127 NPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEVFSNPLHPYT 206 (268)
T ss_pred CCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHHhhCCCCHHH
Confidence 999999999999999999999999887653 38899999999999987 799999999999999999999998877776
Q ss_pred HHH
Q 000497 1453 SFV 1455 (1460)
Q Consensus 1453 ~l~ 1455 (1460)
+..
T Consensus 207 k~L 209 (268)
T COG4608 207 KAL 209 (268)
T ss_pred HHH
Confidence 554
No 438
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.4e-34 Score=322.00 Aligned_cols=188 Identities=32% Similarity=0.437 Sum_probs=154.8
Q ss_pred EEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--------cEEEEcC
Q 000497 609 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAYVPQ 680 (1460)
Q Consensus 609 ~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~y~~Q 680 (1460)
++|+++.|.. +++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++|++|
T Consensus 2 ~~~l~~~~~~------~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q 75 (213)
T cd03235 2 VEDLTVSYGG------HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQ 75 (213)
T ss_pred cccceeEECC------EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEecc
Confidence 4677887742 2359999999999999999999999999999999999999999999987 3999999
Q ss_pred CCCC---CCccHHHHHccCCCC-----------ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000497 681 VPWI---LSGTIRDNILFGKNY-----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 746 (1460)
Q Consensus 681 ~p~l---~~~ti~~nI~~g~~~-----------~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 746 (1460)
+|.+ ++.|++||+.++... ++++.+++++.++++..+. ....+||||||||++||
T Consensus 76 ~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la 144 (213)
T cd03235 76 RRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRVLLA 144 (213)
T ss_pred ccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHHHHH
Confidence 9976 567999999875321 1235566777777764433 23458999999999999
Q ss_pred HHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEe
Q 000497 747 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 815 (1460)
Q Consensus 747 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 815 (1460)
||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++| +++.
T Consensus 145 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~ 212 (213)
T cd03235 145 RALVQDPDLLLLDEPFAGVDPKTQEDIYEL-LRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVAS 212 (213)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-Eeec
Confidence 999999999999999999999999988876 33212257899999999999865 9999999886 5444
No 439
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=331.68 Aligned_cols=206 Identities=24% Similarity=0.372 Sum_probs=171.2
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|++++|+...+...+++|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 47899999999643210113469999999999999999999999999999999999999999998875
Q ss_pred --cEEEEcCCCC--CCCccHHHHHccCCC---CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 --SIAYVPQVPW--ILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 --~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
.++|++|+|. +++.|+.||+.|+.. .+ +++.+++++.++|...... ....||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRH-----------APHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHH
Confidence 3899999985 666799999998632 22 2345667777777654443 345899999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHH
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 821 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l 821 (1460)
++||||++.+|+++||||||++||+.+.+.+.+. +..... ++.|+|++||+++.+..||++++|++|++++.|+++++
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNT-IKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEI 231 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988875 332112 37899999999999888999999999999999999988
Q ss_pred Hh
Q 000497 822 AV 823 (1460)
Q Consensus 822 ~~ 823 (1460)
..
T Consensus 232 ~~ 233 (280)
T PRK13633 232 FK 233 (280)
T ss_pred hc
Confidence 54
No 440
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=368.00 Aligned_cols=217 Identities=24% Similarity=0.361 Sum_probs=188.9
Q ss_pred cEEEEEEEEEecCC--CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH---
Q 000497 1223 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL--- 1297 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l--- 1297 (1460)
.++++|++++|+.+ .+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+.+++
T Consensus 4 ~l~~~nl~~~y~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 83 (648)
T PRK10535 4 LLELKDIRRSYPSGEEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGQDVATLDADALAQL 83 (648)
T ss_pred EEEEeeEEEEeCCCCCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEcCcCCHHHHHHH
Confidence 48999999999642 2469999999999999999999999999999999999999999999999999999887654
Q ss_pred -hcccEEEeCCCccCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000497 1298 -RGRFAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1372 (1460)
Q Consensus 1298 -R~~i~iVpQdp~lf~g-TIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1372 (1460)
|++++++||+|.+|++ |+.||++... ..+.++ .+....+.++.+|++..++....+||+||+||++||||
T Consensus 84 ~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~-----~~~~~~~~l~~lgl~~~~~~~~~~LS~Gq~qrv~LAra 158 (648)
T PRK10535 84 RREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGLERKQ-----RLLRAQELLQRLGLEDRVEYQPSQLSGGQQQRVSIARA 158 (648)
T ss_pred HhccEEEEeCCcccCCCCCHHHHHHHHHHHcCCCHHH-----HHHHHHHHHHHCCChhhhcCCcccCCHHHHHHHHHHHH
Confidence 6789999999999975 9999996421 111111 11233455666688877888888999999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCeEEEEcChhHHh
Q 000497 1373 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1373 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl 1444 (1460)
++++|++|||||||++||.++.+.+.+.|++.. +++|+|+|||+++.+..|||+++|++|++++.|+++|..
T Consensus 159 L~~~P~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (648)
T PRK10535 159 LMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAQEKV 231 (648)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHHHHHhCCEEEEEECCEEEeecCccccc
Confidence 999999999999999999999999999998764 489999999999999889999999999999999999886
No 441
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.5e-34 Score=336.29 Aligned_cols=202 Identities=26% Similarity=0.392 Sum_probs=166.4
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|+++.|.. ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~~i~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 76 (303)
T TIGR01288 3 VAIDLVGVSKSYGD------KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLAR 76 (303)
T ss_pred cEEEEEeEEEEeCC------eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHh
Confidence 46889999999853 2359999999999999999999999999999999999999999999875
Q ss_pred -cEEEEcCCCCCCC-ccHHHHHcc-CC--CCChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHH
Q 000497 674 -SIAYVPQVPWILS-GTIRDNILF-GK--NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 744 (1460)
Q Consensus 674 -~i~y~~Q~p~l~~-~ti~~nI~~-g~--~~~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~ 744 (1460)
.+||++|++.++. .|++||+.+ +. ..+.+ +..++++.+++... ......+||||||||++
T Consensus 77 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-----------~~~~~~~LSgG~~qrv~ 145 (303)
T TIGR01288 77 VAIGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADVRVALLSGGMKRRLT 145 (303)
T ss_pred hcEEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhH-----------hcCchhhCCHHHHHHHH
Confidence 4899999998875 599999974 22 12322 23344555554332 23344689999999999
Q ss_pred HHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHh
Q 000497 745 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 745 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
||||+..+|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 146 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 146 LARALINDPQLLILDEPTTGLDPHARHLIWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999988876 33212357899999999999865 99999999999999999999865
Q ss_pred c
Q 000497 824 S 824 (1460)
Q Consensus 824 ~ 824 (1460)
.
T Consensus 225 ~ 225 (303)
T TIGR01288 225 E 225 (303)
T ss_pred h
Confidence 3
No 442
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-34 Score=297.61 Aligned_cols=213 Identities=25% Similarity=0.361 Sum_probs=181.9
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
|+.+|++++-. .+.+|+++||+++|||.+||+||||||||||+++|.|.+.|++|++.++|.++++.+..++-++-++
T Consensus 2 i~a~nls~~~~--Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 2 IRAENLSYSLA--GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred eeeeeeEEEee--cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 67889987764 4569999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcc-CCccHHHhcCcC----CC---C-ChHH-HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000497 1304 VPQSPFL-FEGSLRDNLDPF----HM---N-DDLK-IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1373 (1460)
Q Consensus 1304 VpQdp~l-f~gTIR~NLdp~----~~---~-sd~e-i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1373 (1460)
.||+..+ |+-|++|-+.++ +. . .|++ ..+++.++++..+- +..-..||||||||+.|||.|
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la---------~R~y~~LSGGEqQRVqlARvL 150 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLA---------GRDYRTLSGGEQQRVQLARVL 150 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhh---------ccchhhcCchHHHHHHHHHHH
Confidence 9999876 999999987543 22 1 2233 45677777654332 222236999999999999999
Q ss_pred cc------CCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEEeCCeEEEEcChhHHhc
Q 000497 1374 LK------SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1374 Lr------~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
.+ ++++|+||||||+||..-...+.++.|+.. +++.|+.|=|+|+... .||||++|.+|||+..|+|++.+.
T Consensus 151 aQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~vlt 230 (259)
T COG4559 151 AQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDVLT 230 (259)
T ss_pred HHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHhcC
Confidence 86 357999999999999999999999988875 5899999999999765 579999999999999999999987
Q ss_pred cC
Q 000497 1446 DE 1447 (1460)
Q Consensus 1446 ~~ 1447 (1460)
.+
T Consensus 231 ~E 232 (259)
T COG4559 231 DE 232 (259)
T ss_pred HH
Confidence 54
No 443
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-34 Score=332.18 Aligned_cols=203 Identities=28% Similarity=0.385 Sum_probs=169.6
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC---eEEEEeC--------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH---GSIHASG-------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~---G~i~~~~-------- 673 (1460)
..++++|+++.|+.. . .++++|+||++++||+++|+||||||||||+++|+|+++|++ |+|.++|
T Consensus 4 ~~l~i~~l~~~~~~~-~---~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~ 79 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-K---KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTV 79 (282)
T ss_pred ceEEEEEEEEEcCCC-C---ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCH
Confidence 468899999999632 1 235999999999999999999999999999999999999988 8998865
Q ss_pred -----cEEEEcCCCC--CCCccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000497 674 -----SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 739 (1460)
Q Consensus 674 -----~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQ 739 (1460)
.+|||+|+|+ +++.|++|||.|+.. .++ ++..++++.+++..... ....+|||||
T Consensus 80 ~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LS~G~ 148 (282)
T PRK13640 80 WDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYID-----------SEPANLSGGQ 148 (282)
T ss_pred HHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhc-----------CCcccCCHHH
Confidence 4899999995 667899999988632 233 33556677777764433 3446999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCH
Q 000497 740 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSS 818 (1460)
Q Consensus 740 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~ 818 (1460)
|||++||||++++|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+..||++++|++|++++.|++
T Consensus 149 ~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~ 227 (282)
T PRK13640 149 KQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKL-IRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSP 227 (282)
T ss_pred HHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999988876 332122 37899999999999988999999999999999999
Q ss_pred HHHHh
Q 000497 819 ADLAV 823 (1460)
Q Consensus 819 ~~l~~ 823 (1460)
+++..
T Consensus 228 ~~~~~ 232 (282)
T PRK13640 228 VEIFS 232 (282)
T ss_pred HHHhc
Confidence 88754
No 444
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-34 Score=321.27 Aligned_cols=190 Identities=24% Similarity=0.349 Sum_probs=158.3
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------c
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 674 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 674 (1460)
++++|+++.|.. . ++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~---~---~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 73 (211)
T cd03264 1 LQLENLTKRYGK---K---RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRR 73 (211)
T ss_pred CEEEEEEEEECC---E---EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhh
Confidence 367899998853 2 3599999999999 9999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCCc-cHHHHHccCCC---CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000497 675 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 746 (1460)
Q Consensus 675 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 746 (1460)
++|++|+|.++.. |++||+.+... .+ +++.+++++.+++....+ ....+||||||||++||
T Consensus 74 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la 142 (211)
T cd03264 74 IGYLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-----------KKIGSLSGGMRRRVGIA 142 (211)
T ss_pred eEEecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-----------CchhhCCHHHHHHHHHH
Confidence 8999999998876 99999986321 12 234556666666654332 23458999999999999
Q ss_pred HHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEec
Q 000497 747 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 747 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g 816 (1460)
||++++|+++||||||++||+.+.+++.+. +.. ..+++|+|++||+++.+. .||++++|++|++++.|
T Consensus 143 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 143 QALVGDPSILIVDEPTAGLDPEERIRFRNL-LSE-LGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999999988876 333 334589999999999986 49999999999998754
No 445
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.4e-34 Score=343.67 Aligned_cols=200 Identities=26% Similarity=0.402 Sum_probs=168.0
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|++++|.. +.+|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.++|
T Consensus 3 ~L~~~nls~~y~~------~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~ 76 (402)
T PRK09536 3 MIDVSDLSVEFGD------TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAAS 76 (402)
T ss_pred eEEEeeEEEEECC------EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHh
Confidence 4789999999852 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCCC-CCccHHHHHccCCC-----C------ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000497 674 -SIAYVPQVPWI-LSGTIRDNILFGKN-----Y------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 740 (1460)
Q Consensus 674 -~i~y~~Q~p~l-~~~ti~~nI~~g~~-----~------~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQk 740 (1460)
.+|||+|++.+ ++.|++||+.++.. + +.++.+++++..++.... .....+||||||
T Consensus 77 ~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~-----------~~~~~~LSgGer 145 (402)
T PRK09536 77 RRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFA-----------DRPVTSLSGGER 145 (402)
T ss_pred cceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHH
Confidence 48999999987 56799999988641 1 123455666666664322 234568999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHH
Q 000497 741 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 819 (1460)
Q Consensus 741 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 819 (1460)
||++|||||+++|+++||||||++||+...+.+++. +.....+++|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 146 QRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~l-L~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ 224 (402)
T PRK09536 146 QRVLLARALAQATPVLLLDEPTASLDINHQVRTLEL-VRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPA 224 (402)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHH
Confidence 999999999999999999999999999998888765 3321224789999999999985 59999999999999999999
Q ss_pred HHHh
Q 000497 820 DLAV 823 (1460)
Q Consensus 820 ~l~~ 823 (1460)
++..
T Consensus 225 ev~~ 228 (402)
T PRK09536 225 DVLT 228 (402)
T ss_pred HHhC
Confidence 8754
No 446
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.1e-34 Score=325.06 Aligned_cols=197 Identities=26% Similarity=0.370 Sum_probs=161.9
Q ss_pred EEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--------------
Q 000497 608 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 673 (1460)
Q Consensus 608 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 673 (1460)
+++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 75 (232)
T cd03218 2 RAENLSKRYGK---R---KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARL 75 (232)
T ss_pred eEEEEEEEeCC---E---EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhc
Confidence 57889998852 2 359999999999999999999999999999999999999999998865
Q ss_pred cEEEEcCCCCCCCc-cHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHH
Q 000497 674 SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 745 (1460)
Q Consensus 674 ~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~l 745 (1460)
.++|++|++.++.+ |++||+.++.+ .++ ++.++.++..++.. .......+||||||||++|
T Consensus 76 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~l 144 (232)
T cd03218 76 GIGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITH-----------LRKSKASSLSGGERRRVEI 144 (232)
T ss_pred cEEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHHHH
Confidence 38999999988876 99999987532 121 22334444444432 2345567999999999999
Q ss_pred HHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHH
Q 000497 746 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 822 (1460)
Q Consensus 746 ARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~ 822 (1460)
|||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++.+.|+.+++.
T Consensus 145 a~al~~~p~llllDEPt~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 221 (232)
T cd03218 145 ARALATNPKFLLLDEPFAGVDPIAVQDIQKI-IKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIA 221 (232)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhh
Confidence 9999999999999999999999999888775 33212347899999999987665 9999999999999999988764
No 447
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-34 Score=329.26 Aligned_cols=207 Identities=26% Similarity=0.331 Sum_probs=172.2
Q ss_pred CCCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEeC---
Q 000497 602 SKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG--- 673 (1460)
Q Consensus 602 ~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~--- 673 (1460)
.....++++|+++.|+. +++|+|+||++++||+++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 16 ~~~~~l~~~nl~~~~~~------~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~ 89 (267)
T PRK14237 16 EEEIALSTKDLHVYYGK------KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDI 89 (267)
T ss_pred CCCeEEEEeeEEEEECC------eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEc
Confidence 34567899999999852 235999999999999999999999999999999999986 5899998765
Q ss_pred ------------cEEEEcCCCCCCCccHHHHHccCCC----CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000497 674 ------------SIAYVPQVPWILSGTIRDNILFGKN----YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 733 (1460)
Q Consensus 674 ------------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~ 733 (1460)
.++|++|+|.++..|++|||.++.. .+ +++..++++.+++..++. +..+..+.
T Consensus 90 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~ 162 (267)
T PRK14237 90 NRKEINVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSAL 162 (267)
T ss_pred ccccCChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcc
Confidence 3899999999998999999987532 12 233455666666654332 23456778
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeE
Q 000497 734 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQV 812 (1460)
Q Consensus 734 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i 812 (1460)
+||||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.++.|+|++||+++.+. .||++++|++|++
T Consensus 163 ~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i 240 (267)
T PRK14237 163 TLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEET-MFE-LKKNYTIIIVTHNMQQAARASDYTAFFYLGDL 240 (267)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999998888775 333 345689999999999886 5999999999999
Q ss_pred EEecCHHHHHh
Q 000497 813 KWIGSSADLAV 823 (1460)
Q Consensus 813 ~~~g~~~~l~~ 823 (1460)
++.|+++++..
T Consensus 241 ~~~g~~~~~~~ 251 (267)
T PRK14237 241 IEYDKTRNIFT 251 (267)
T ss_pred EEeCCHHHHhc
Confidence 99999988753
No 448
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=329.19 Aligned_cols=205 Identities=23% Similarity=0.343 Sum_probs=169.9
Q ss_pred CCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEeC----
Q 000497 603 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG---- 673 (1460)
Q Consensus 603 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~---- 673 (1460)
.+..++++|+++.|.. . ++|+|+||+|++|++++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 16 ~~~~l~~~nl~~~~~~---~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~ 89 (267)
T PRK14235 16 TEIKMRARDVSVFYGE---K---QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIY 89 (267)
T ss_pred CCceEEEEeEEEEECC---E---EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECc
Confidence 3457899999999852 2 359999999999999999999999999999999999974 899998765
Q ss_pred -----------cEEEEcCCCCCCCccHHHHHccCCC---C--C----hHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000497 674 -----------SIAYVPQVPWILSGTIRDNILFGKN---Y--D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 733 (1460)
Q Consensus 674 -----------~i~y~~Q~p~l~~~ti~~nI~~g~~---~--~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~ 733 (1460)
.++|++|+|.+++.|++||+.++.. . + .++..++++.+++..++. +..+..+.
T Consensus 90 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~ 162 (267)
T PRK14235 90 DPRLDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGT 162 (267)
T ss_pred ccccchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcc
Confidence 3899999999998899999987531 1 1 123455666666643322 22356677
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeE
Q 000497 734 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 812 (1460)
Q Consensus 734 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i 812 (1460)
+||||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i 240 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEEL-IDE-LRQNYTIVIVTHSMQQAARVSQRTAFFHLGNL 240 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHH-HHH-HhcCCeEEEEEcCHHHHHhhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999888776 333 3346899999999999864 999999999999
Q ss_pred EEecCHHHHH
Q 000497 813 KWIGSSADLA 822 (1460)
Q Consensus 813 ~~~g~~~~l~ 822 (1460)
++.|+++++.
T Consensus 241 ~~~g~~~~~~ 250 (267)
T PRK14235 241 VEVGDTEKMF 250 (267)
T ss_pred EEeCCHHHHH
Confidence 9999988875
No 449
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3e-34 Score=309.90 Aligned_cols=166 Identities=33% Similarity=0.550 Sum_probs=148.7
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------c
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 674 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 674 (1460)
++++|+++.|.... +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (178)
T cd03247 1 LSINNVSFSYPEQE----QQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSL 76 (178)
T ss_pred CEEEEEEEEeCCCC----ccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhh
Confidence 36789999986421 2359999999999999999999999999999999999999999999886 3
Q ss_pred EEEEcCCCCCCCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCC
Q 000497 675 IAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSD 754 (1460)
Q Consensus 675 i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~ 754 (1460)
++|++|+|++++.|++||| ..+||||||||++||||++.+|+
T Consensus 77 i~~~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~ 118 (178)
T cd03247 77 ISVLNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAP 118 (178)
T ss_pred EEEEccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCC
Confidence 8999999999999999998 45899999999999999999999
Q ss_pred EEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEec
Q 000497 755 IYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 755 illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g 816 (1460)
++||||||++||+.+.+.+++. +.. +.+++|+|++||+.+.++.||++++|++|++++.|
T Consensus 119 ~lllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 119 IVLLDEPTVGLDPITERQLLSL-IFE-VLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEEECCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999888876 333 34578999999999999899999999999998654
No 450
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.4e-34 Score=321.55 Aligned_cols=196 Identities=21% Similarity=0.337 Sum_probs=160.4
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------c
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 674 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 674 (1460)
++++|+++.|+... +..++++|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 2 l~~~~v~~~~~~~~--~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (218)
T cd03266 2 ITADALTKRFRDVK--KTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRR 79 (218)
T ss_pred eEEEEEEEecCCCC--ccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhh
Confidence 57889999986421 112469999999999999999999999999999999999999999999875 4
Q ss_pred EEEEcCCCCCCCc-cHHHHHccCCC---CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000497 675 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 746 (1460)
Q Consensus 675 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 746 (1460)
++||+|+|.++.. |++||+.+... .+ .++..++++..++... ......+||||||||++||
T Consensus 80 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la 148 (218)
T cd03266 80 LGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEEL-----------LDRRVGGFSTGMRQKVAIA 148 (218)
T ss_pred EEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhhhhhhcCHHHHHHHHHH
Confidence 8999999998885 99999976421 22 2344555666655432 3345678999999999999
Q ss_pred HHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000497 747 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 747 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 816 (1460)
||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+.+.+.. ||++++|++|++.+.|
T Consensus 149 ral~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 149 RALVHDPPVLLLDEPTTGLDVMATRALREF-IRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHHhcCCCEEEEcCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999998888776 33212347899999999998764 9999999999998654
No 451
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=331.45 Aligned_cols=201 Identities=23% Similarity=0.360 Sum_probs=168.7
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|+.+ ..+|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~-----~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~ 79 (283)
T PRK13636 5 ILKVEELNYNYSDG-----THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMK 79 (283)
T ss_pred eEEEEeEEEEeCCC-----CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHH
Confidence 58899999999521 2359999999999999999999999999999999999999999998875
Q ss_pred ---cEEEEcCCC--CCCCccHHHHHccCCC---CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHH
Q 000497 674 ---SIAYVPQVP--WILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 741 (1460)
Q Consensus 674 ---~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkq 741 (1460)
.++|++|+| .+++.|++|||.++.. +. .++..++++.++|... ......+|||||||
T Consensus 80 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G~~q 148 (283)
T PRK13636 80 LRESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHL-----------KDKPTHCLSFGQKK 148 (283)
T ss_pred HHhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhCCcccCCHHHHH
Confidence 389999998 5778999999987531 22 2345566666666532 23567799999999
Q ss_pred HHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHH
Q 000497 742 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 819 (1460)
Q Consensus 742 Rv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 819 (1460)
|++|||||+.+|+++||||||++||+...+.+.+. +..... .|+|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 149 rl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~ 227 (283)
T PRK13636 149 RVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKL-LVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPK 227 (283)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999887775 332112 2789999999999987 59999999999999999998
Q ss_pred HHHh
Q 000497 820 DLAV 823 (1460)
Q Consensus 820 ~l~~ 823 (1460)
++..
T Consensus 228 ~~~~ 231 (283)
T PRK13636 228 EVFA 231 (283)
T ss_pred HHhc
Confidence 8754
No 452
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=332.57 Aligned_cols=206 Identities=25% Similarity=0.397 Sum_probs=167.6
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|..... ..+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~~~~~~~-~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13641 2 SIKFENVDYIYSPGTP-MEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNL 80 (287)
T ss_pred EEEEEEEEEEcCCCCC-ccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 4678999999963211 012469999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCC--CCCCccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000497 674 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 739 (1460)
Q Consensus 674 -----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQ 739 (1460)
.++|++|+| .+++.|++|||.++.. .+. ++..++++.++++.+. ......+|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq 150 (287)
T PRK13641 81 KKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDL----------ISKSPFELSGGQ 150 (287)
T ss_pred HHHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH----------hhCCcccCCHHH
Confidence 379999998 5777899999987531 222 2345556666664222 234566899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCH
Q 000497 740 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSS 818 (1460)
Q Consensus 740 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~ 818 (1460)
|||++||||+..+|+++||||||++||+...+.+.+. +.....++.|+|++||+++.+. .||+|++|++|++++.|++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~-l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~ 229 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQL-FKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASP 229 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999998887775 3331234789999999999876 5999999999999999999
Q ss_pred HHHHh
Q 000497 819 ADLAV 823 (1460)
Q Consensus 819 ~~l~~ 823 (1460)
+++..
T Consensus 230 ~~~~~ 234 (287)
T PRK13641 230 KEIFS 234 (287)
T ss_pred HHHhc
Confidence 88754
No 453
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-34 Score=328.73 Aligned_cols=203 Identities=27% Similarity=0.415 Sum_probs=167.8
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|+++.|+.. . +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 6 ~~l~~~nl~~~~~~~-~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~ 81 (271)
T PRK13632 6 VMIKVENVSFSYPNS-E---NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEI 81 (271)
T ss_pred eEEEEEeEEEEcCCC-C---ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHH
Confidence 468899999999632 1 2359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCC--CCCccHHHHHccCCC---CChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 --SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 --~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
.++||+|+|. +++.|++|||.++.. ++++ +..++++..++...+. ....+||||||||
T Consensus 82 ~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr 150 (271)
T PRK13632 82 RKKIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLD-----------KEPQNLSGGQKQR 150 (271)
T ss_pred hcceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CCcccCCHHHHHH
Confidence 3899999984 557799999987532 3333 2445566666654333 3456999999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccC-CceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHH
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML-QKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 821 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~-~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l 821 (1460)
++||||++.+|+++||||||++||+.+.+.+++. +.....+ ++|+|++||+++.+..||+|++|++|++.+.|+.+++
T Consensus 151 l~laral~~~p~lllLDEP~~gLD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 229 (271)
T PRK13632 151 VAIASVLALNPEIIIFDESTSMLDPKGKREIKKI-MVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEI 229 (271)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988876 3321223 4899999999999888999999999999999998876
Q ss_pred Hh
Q 000497 822 AV 823 (1460)
Q Consensus 822 ~~ 823 (1460)
..
T Consensus 230 ~~ 231 (271)
T PRK13632 230 LN 231 (271)
T ss_pred hc
Confidence 53
No 454
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=327.64 Aligned_cols=203 Identities=26% Similarity=0.321 Sum_probs=167.7
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcC---ccC--CCeEEEEeC-------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGE---MML--THGSIHASG------- 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~---~~~--~~G~i~~~~------- 673 (1460)
.++++|+++.|.. +++|+|+||++++||+++|+||||||||||+++|+|. .++ ++|+|.++|
T Consensus 3 ~l~~~~~~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~ 76 (250)
T PRK14245 3 KIDARDVNFWYGD------FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKG 76 (250)
T ss_pred EEEEEEEEEEECC------EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEeccccc
Confidence 5789999999853 2359999999999999999999999999999999996 454 589998764
Q ss_pred --------cEEEEcCCCCCCCccHHHHHccCCC----CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000497 674 --------SIAYVPQVPWILSGTIRDNILFGKN----YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 737 (1460)
Q Consensus 674 --------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSG 737 (1460)
.++|++|+|.+++.|++|||.++.. .+ +++..++++.+++..++. +.....+.+|||
T Consensus 77 ~~~~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 149 (250)
T PRK14245 77 VQVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSG 149 (250)
T ss_pred ccHHHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCH
Confidence 3899999999998999999987531 11 233455666666643332 234566789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEec
Q 000497 738 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 738 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g 816 (1460)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 150 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~ 227 (250)
T PRK14245 150 GQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEEL-IHE-LKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYD 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999988776 333 345789999999999986 49999999999999999
Q ss_pred CHHHHHh
Q 000497 817 SSADLAV 823 (1460)
Q Consensus 817 ~~~~l~~ 823 (1460)
+++++..
T Consensus 228 ~~~~~~~ 234 (250)
T PRK14245 228 DTKKIFT 234 (250)
T ss_pred CHHHHhc
Confidence 9998853
No 455
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=327.40 Aligned_cols=204 Identities=23% Similarity=0.339 Sum_probs=166.9
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc--C---CCeEEEEeC------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM--L---THGSIHASG------ 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~--~---~~G~i~~~~------ 673 (1460)
..++++|+++.|.. +++|+|+||+|++||+++|+|+||||||||+++|+|.++ | ++|+|.++|
T Consensus 11 ~~l~i~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~ 84 (259)
T PRK14274 11 EVYQINGMNLWYGQ------HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKG 84 (259)
T ss_pred ceEEEeeEEEEECC------eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEcccc
Confidence 45899999998852 235999999999999999999999999999999999987 3 689998754
Q ss_pred ---------cEEEEcCCCCCCCccHHHHHccCCCC----ChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000497 674 ---------SIAYVPQVPWILSGTIRDNILFGKNY----DPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 736 (1460)
Q Consensus 674 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LS 736 (1460)
.+||++|+|.+++.|++||+.++... +++ +..++++..++.+++. +.....+.+||
T Consensus 85 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS 157 (259)
T PRK14274 85 KVDLVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLS 157 (259)
T ss_pred ccCHHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCC
Confidence 38999999999989999999876321 222 2333445555543221 23456777999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEe
Q 000497 737 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWI 815 (1460)
Q Consensus 737 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~ 815 (1460)
||||||++||||++.+|+++||||||++||+++.+.+.+. +.. +.+++|+|++||+++.+. .||++++|++|++++.
T Consensus 158 ~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~ 235 (259)
T PRK14274 158 GGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEEL-ILK-LKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVEC 235 (259)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999998888765 433 344689999999999876 4999999999999999
Q ss_pred cCHHHHHh
Q 000497 816 GSSADLAV 823 (1460)
Q Consensus 816 g~~~~l~~ 823 (1460)
|+++++..
T Consensus 236 g~~~~~~~ 243 (259)
T PRK14274 236 NDTNKMFS 243 (259)
T ss_pred CCHHHHhh
Confidence 99998753
No 456
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.7e-34 Score=321.73 Aligned_cols=193 Identities=26% Similarity=0.381 Sum_probs=157.3
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|+++.|+... ...++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~--~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (221)
T TIGR02211 2 LKCENLGKRYQEGK--LDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAK 79 (221)
T ss_pred EEEEeeeEEccCCC--cceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHH
Confidence 57889999986321 112469999999999999999999999999999999999999999998864
Q ss_pred ----cEEEEcCCCCCCC-ccHHHHHccCC---CCC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHH
Q 000497 674 ----SIAYVPQVPWILS-GTIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 741 (1460)
Q Consensus 674 ----~i~y~~Q~p~l~~-~ti~~nI~~g~---~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkq 741 (1460)
.++|++|+|.+++ .|++||+.++. .++ +++..++++.++++..+ ......|||||||
T Consensus 80 ~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~q 148 (221)
T TIGR02211 80 LRNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRI-----------NHRPSELSGGERQ 148 (221)
T ss_pred HHHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHH
Confidence 3899999998885 59999998742 122 22344555555554332 3345689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000497 742 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVK 813 (1460)
Q Consensus 742 Rv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 813 (1460)
|++||||++.+|+++||||||++||+++.+.+.+. +.... ..++|+|++||+++.+..+|+|++|++|+++
T Consensus 149 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 149 RVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDL-MLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999988876 33211 2378999999999998889999999999975
No 457
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=5e-34 Score=328.52 Aligned_cols=201 Identities=24% Similarity=0.343 Sum_probs=165.3
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|+++.|.. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 79 (269)
T PRK11831 6 NLVDMRGVSFTRGN------RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRL 79 (269)
T ss_pred ceEEEeCeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhH
Confidence 46899999999852 2359999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCCCCCCc-cHHHHHccCC----CCChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000497 674 -----SIAYVPQVPWILSG-TIRDNILFGK----NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 739 (1460)
Q Consensus 674 -----~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQ 739 (1460)
.++|++|++.+++. |++||+.++. ..+.+ +..+.++..++... ......+|||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq 148 (269)
T PRK11831 80 YTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGA-----------AKLMPSELSGGM 148 (269)
T ss_pred HHHhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHH
Confidence 38999999999876 9999998642 12222 33344555555432 223456899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecC
Q 000497 740 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 817 (1460)
Q Consensus 740 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 817 (1460)
|||++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 149 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~ 227 (269)
T PRK11831 149 ARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKL-ISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGS 227 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999887775 332112 37899999999998875 99999999999999999
Q ss_pred HHHHHh
Q 000497 818 SADLAV 823 (1460)
Q Consensus 818 ~~~l~~ 823 (1460)
++++..
T Consensus 228 ~~~~~~ 233 (269)
T PRK11831 228 AQALQA 233 (269)
T ss_pred HHHHhc
Confidence 988754
No 458
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.1e-34 Score=338.08 Aligned_cols=203 Identities=26% Similarity=0.373 Sum_probs=167.7
Q ss_pred CceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC----------
Q 000497 604 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 673 (1460)
Q Consensus 604 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 673 (1460)
...++++|++..|.. ..+|+|+||+|++|++++++||||||||||+++|+|+++|++|+|.++|
T Consensus 39 ~~~i~i~nl~k~y~~------~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~ 112 (340)
T PRK13536 39 TVAIDLAGVSKSYGD------KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLA 112 (340)
T ss_pred ceeEEEEEEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHH
Confidence 356999999999853 2359999999999999999999999999999999999999999999876
Q ss_pred --cEEEEcCCCCCC-CccHHHHHcc-CCC--CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000497 674 --SIAYVPQVPWIL-SGTIRDNILF-GKN--YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 743 (1460)
Q Consensus 674 --~i~y~~Q~p~l~-~~ti~~nI~~-g~~--~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv 743 (1460)
.+|||||++.++ +.|++||+.+ +.. .+. ++.+++++.++|... ...+..+||||||||+
T Consensus 113 ~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~-----------~~~~~~~LS~G~kqrv 181 (340)
T PRK13536 113 RARIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADARVSDLSGGMKRRL 181 (340)
T ss_pred hccEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hCCChhhCCHHHHHHH
Confidence 499999999986 4599999975 321 122 233344444444321 2334458999999999
Q ss_pred HHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHH
Q 000497 744 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 822 (1460)
Q Consensus 744 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~ 822 (1460)
+||||+.++|+++||||||++||+.+.+.+++. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++.
T Consensus 182 ~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~-l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~ 260 (340)
T PRK13536 182 TLARALINDPQLLILDEPTTGLDPHARHLIWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALI 260 (340)
T ss_pred HHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999988876 33212357899999999999875 9999999999999999999986
Q ss_pred hc
Q 000497 823 VS 824 (1460)
Q Consensus 823 ~~ 824 (1460)
..
T Consensus 261 ~~ 262 (340)
T PRK13536 261 DE 262 (340)
T ss_pred hh
Confidence 54
No 459
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.8e-34 Score=316.72 Aligned_cols=194 Identities=22% Similarity=0.312 Sum_probs=162.6
Q ss_pred cEEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000497 1223 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1302 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1302 (1460)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .. .|++++
T Consensus 2 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~~-~~~~~~ 76 (207)
T PRK13539 2 MLEGEDLACVRGG--RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--PD-VAEACH 76 (207)
T ss_pred EEEEEeEEEEECC--eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--hh-hHhhcE
Confidence 3789999999964 369999999999999999999999999999999999999999999999998753 22 788999
Q ss_pred EEeCCCccC-CccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000497 1303 VVPQSPFLF-EGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1378 (1460)
Q Consensus 1303 iVpQdp~lf-~gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1378 (1460)
+++|++.++ ..|+++|+..... ..++++.++++..++. .........||+|||||++||||++++|+
T Consensus 77 ~~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~---------~~~~~~~~~LS~G~~qrl~la~al~~~p~ 147 (207)
T PRK13539 77 YLGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLA---------PLAHLPFGYLSAGQKRRVALARLLVSNRP 147 (207)
T ss_pred EecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCH---------HHHcCChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999988765 5799999864321 2233455555555543 32333445799999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhHhhcCEEEEEeC
Q 000497 1379 VLCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEILILDH 1431 (1460)
Q Consensus 1379 ILlLDEaTS~lD~~te~~Iq~~I~~~-~~~~TvI~IaHrl~ti~~~DrIlVl~~ 1431 (1460)
+|||||||++||..+.+.+.+.|++. -+++|+|++||+++.+.. |+++.++.
T Consensus 148 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 148 IWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 99999999999999999999999865 358999999999999988 99988754
No 460
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-34 Score=318.30 Aligned_cols=190 Identities=27% Similarity=0.382 Sum_probs=158.1
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------cE
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 675 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 675 (1460)
++++|+++.|.. . ..|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 i~~~~l~~~~~~----~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i 72 (211)
T cd03298 1 VRLDKIRFSYGE----Q----PMHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPV 72 (211)
T ss_pred CEEEeEEEEeCC----E----ecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccE
Confidence 357888998852 1 2399999999999999999999999999999999999999999876 38
Q ss_pred EEEcCCCCCCCc-cHHHHHccCCCC-------ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHH
Q 000497 676 AYVPQVPWILSG-TIRDNILFGKNY-------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 747 (1460)
Q Consensus 676 ~y~~Q~p~l~~~-ti~~nI~~g~~~-------~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lAR 747 (1460)
+|++|+|.++.+ |++||+.++... ++++..++++.+++....... ..+||||||||++|||
T Consensus 73 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ia~ 141 (211)
T cd03298 73 SMLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRL-----------PGELSGGERQRVALAR 141 (211)
T ss_pred EEEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHHHHHH
Confidence 999999998875 999999875321 233566677777776544433 3489999999999999
Q ss_pred HHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000497 748 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 748 aly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 816 (1460)
|++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 142 al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 142 VLVRDKPVLLLDEPFAALDPALRAEMLDL-VLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999988876 33211 237899999999999865 9999999999998654
No 461
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-34 Score=327.74 Aligned_cols=205 Identities=25% Similarity=0.347 Sum_probs=168.1
Q ss_pred CceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEeC-----
Q 000497 604 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG----- 673 (1460)
Q Consensus 604 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~----- 673 (1460)
+..++++|+++.|.. ..+|+|+||+|++|++++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 11 ~~~l~i~nl~~~~~~------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~ 84 (269)
T PRK14259 11 NIIISLQNVTISYGT------FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYD 84 (269)
T ss_pred CceEEEEeEEEEECC------EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 456899999999853 235999999999999999999999999999999999987 5899998765
Q ss_pred ----------cEEEEcCCCCCCCccHHHHHccCCCC---C---hHHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000497 674 ----------SIAYVPQVPWILSGTIRDNILFGKNY---D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 737 (1460)
Q Consensus 674 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~~---~---~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSG 737 (1460)
.++|++|+|.++..|++||+.++... + +++..++++.+++...+. +.......+|||
T Consensus 85 ~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 157 (269)
T PRK14259 85 PRVDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSG 157 (269)
T ss_pred ccCCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCH
Confidence 38999999999988999999976432 2 233444555555432221 234556779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeC-------
Q 000497 738 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDK------- 809 (1460)
Q Consensus 738 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~------- 809 (1460)
|||||++||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+. .||++++|++
T Consensus 158 G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~ 235 (269)
T PRK14259 158 GQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEET-MHE-LKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGS 235 (269)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhcCEEEEEecccccccc
Confidence 999999999999999999999999999999999988776 333 345689999999999886 5999999996
Q ss_pred ----CeEEEecCHHHHHh
Q 000497 810 ----GQVKWIGSSADLAV 823 (1460)
Q Consensus 810 ----G~i~~~g~~~~l~~ 823 (1460)
|++++.|+.+++..
T Consensus 236 ~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 236 GGKVGYLVEFNETKKIFN 253 (269)
T ss_pred ccccceEEEeCCHHHHHh
Confidence 67899999888753
No 462
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-34 Score=325.13 Aligned_cols=200 Identities=25% Similarity=0.387 Sum_probs=163.0
Q ss_pred EEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------c
Q 000497 608 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 674 (1460)
Q Consensus 608 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~ 674 (1460)
+++|+++.|+.. +.+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (242)
T cd03295 2 EFENVTKRYGGG-----KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRK 76 (242)
T ss_pred EEEEEEEEeCCc-----ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcc
Confidence 578899988631 2359999999999999999999999999999999999999999998875 4
Q ss_pred EEEEcCCCCCCC-ccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000497 675 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 746 (1460)
Q Consensus 675 i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 746 (1460)
++|++|+|.++. .|++||+.++.. .+. ++..++++..++.. .......+.+||||||||++||
T Consensus 77 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~la 147 (242)
T cd03295 77 IGYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVA 147 (242)
T ss_pred eEEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHH
Confidence 899999999886 599999987532 222 23344455444432 0123456679999999999999
Q ss_pred HHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHH
Q 000497 747 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLA 822 (1460)
Q Consensus 747 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~ 822 (1460)
||++.+|++++|||||++||+.+.+.+.+. +..... +++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 148 ral~~~p~llllDEPt~~LD~~~~~~l~~~-L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 224 (242)
T cd03295 148 RALAADPPLLLMDEPFGALDPITRDQLQEE-FKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEIL 224 (242)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999998888776 332112 3789999999999875 59999999999999999988774
No 463
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=7.5e-34 Score=361.55 Aligned_cols=199 Identities=26% Similarity=0.339 Sum_probs=167.6
Q ss_pred CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCC--CceEEECCEeCCCCChHHHhcccEEEeCCCccCCc-c
Q 000497 1238 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC--GGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEG-S 1314 (1460)
Q Consensus 1238 ~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~--~G~I~IDG~di~~i~~~~lR~~i~iVpQdp~lf~g-T 1314 (1460)
+.+|+|+|++++|||++||+||||||||||+++|.|+.+|. +|+|.+||.++. ...+++++||||++.+|+. |
T Consensus 81 ~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~----~~~~~~i~yv~Q~~~l~~~lT 156 (659)
T PLN03211 81 RTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPT----KQILKRTGFVTQDDILYPHLT 156 (659)
T ss_pred CeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECc----hhhccceEEECcccccCCcCC
Confidence 46999999999999999999999999999999999999885 899999999874 2456789999999999975 9
Q ss_pred HHHhcCcCC------CCChHHHHHHHHHhcHHHHHHhCCC----chhhhc-CCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000497 1315 LRDNLDPFH------MNDDLKIWSVLEKCHVKEEVEAVGL----ETFVKE-SGISFSVGQRQLICLARALLKSSKVLCLD 1383 (1460)
Q Consensus 1315 IR~NLdp~~------~~sd~ei~~aL~~~~l~~~i~~lgL----dt~v~e-~G~~LSgGQrQrl~LARALLr~~~ILlLD 1383 (1460)
+|||+.+.. ..++++..+. ..+.++.+|| |+.+|+ ....||||||||++|||||+++|+||+||
T Consensus 157 V~E~l~~~a~~~~~~~~~~~~~~~~-----v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLD 231 (659)
T PLN03211 157 VRETLVFCSLLRLPKSLTKQEKILV-----AESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILD 231 (659)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHH-----HHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEe
Confidence 999996521 1233332211 2344555555 666664 35689999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-H-hhcCEEEEEeCCeEEEEcChhHHhc
Q 000497 1384 ECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST-V-LNMDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1384 EaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~t-i-~~~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
|||++||..+...+.+.|++.. +++|||+++|+++. + ..||+|++|++|++++.|+++++.+
T Consensus 232 EPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~ 296 (659)
T PLN03211 232 EPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMA 296 (659)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHH
Confidence 9999999999999999998765 58999999999984 4 4589999999999999999999864
No 464
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=327.07 Aligned_cols=204 Identities=25% Similarity=0.349 Sum_probs=167.3
Q ss_pred CceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEeC-----
Q 000497 604 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG----- 673 (1460)
Q Consensus 604 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~----- 673 (1460)
...++++|+++.|.. +++|+|+||++++||+++|+|+||||||||+++|+|.++| ++|+|.++|
T Consensus 10 ~~~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~ 83 (258)
T PRK14268 10 QPQIKVENLNLWYGE------KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYE 83 (258)
T ss_pred ceeEEEeeeEEEeCC------eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEccc
Confidence 346899999998852 2359999999999999999999999999999999999875 799998754
Q ss_pred ----------cEEEEcCCCCCCCccHHHHHccCCC---CChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000497 674 ----------SIAYVPQVPWILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 736 (1460)
Q Consensus 674 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LS 736 (1460)
.++|++|++.+++.|++||+.++.. .+.+ +..++++.+++..++. ........+||
T Consensus 84 ~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS 156 (258)
T PRK14268 84 PDVDVVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS-------DRLKSPALSLS 156 (258)
T ss_pred ccchHHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCChhhCC
Confidence 3899999999998999999987531 2222 2344555555532211 22345677999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEe
Q 000497 737 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 815 (1460)
Q Consensus 737 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 815 (1460)
||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 157 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 234 (258)
T PRK14268 157 GGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDL-IMN-LKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEF 234 (258)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHH-HHH-HhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999988775 332 3357899999999998865 999999999999999
Q ss_pred cCHHHHH
Q 000497 816 GSSADLA 822 (1460)
Q Consensus 816 g~~~~l~ 822 (1460)
|+++++.
T Consensus 235 ~~~~~~~ 241 (258)
T PRK14268 235 GQTRQIF 241 (258)
T ss_pred CCHHHHh
Confidence 9998874
No 465
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.7e-34 Score=323.84 Aligned_cols=199 Identities=26% Similarity=0.356 Sum_probs=163.9
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|+++.|+. +++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~------~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 75 (240)
T PRK09493 2 IEFKNVSKHFGP------TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLI 75 (240)
T ss_pred EEEEeEEEEECC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHH
Confidence 568899998852 2359999999999999999999999999999999999999999998875
Q ss_pred --cEEEEcCCCCCCC-ccHHHHHccCC----CCCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 --SIAYVPQVPWILS-GTIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 --~i~y~~Q~p~l~~-~ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
.++|++|++.++. .|++||+.++. ..+. ++..++++..+++.. .......||||||||
T Consensus 76 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qr 144 (240)
T PRK09493 76 RQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAER-----------AHHYPSELSGGQQQR 144 (240)
T ss_pred hhceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHH-----------HhcChhhcCHHHHHH
Confidence 3899999998875 59999998753 1222 233445555444332 234556899999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHH
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 821 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 821 (1460)
++||||++.+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 145 v~la~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 223 (240)
T PRK09493 145 VAIARALAVKPKLMLFDEPTSALDPELRHEVLKV-MQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVL 223 (240)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHH
Confidence 9999999999999999999999999999888775 33212347899999999999865 999999999999999998876
Q ss_pred Hh
Q 000497 822 AV 823 (1460)
Q Consensus 822 ~~ 823 (1460)
..
T Consensus 224 ~~ 225 (240)
T PRK09493 224 IK 225 (240)
T ss_pred hc
Confidence 43
No 466
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=4.2e-34 Score=320.81 Aligned_cols=201 Identities=22% Similarity=0.320 Sum_probs=163.0
Q ss_pred EEEEEEEEEecC----C-CCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEEC--C--EeCCCCCh
Q 000497 1224 IEFQNVTMRYKP----S-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD--G--LNIINTPV 1294 (1460)
Q Consensus 1224 I~f~nvs~~Y~~----~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ID--G--~di~~i~~ 1294 (1460)
|+++|++++|+. + ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+| | +++...+.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 789999999963 1 2469999999999999999999999999999999999999999999998 4 37766665
Q ss_pred HH---H-hcccEEEeCCCccCCc-cHHHhcCcC---CCCChHHHHHHHHHhcHHHHHHhCCCchh-hhcCCCCCChhHHH
Q 000497 1295 RD---L-RGRFAVVPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQ 1365 (1460)
Q Consensus 1295 ~~---l-R~~i~iVpQdp~lf~g-TIR~NLdp~---~~~sd~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQ 1365 (1460)
.. + +++++|+||+|.+|+. |+++|+... .....++..+ ...+.++.+|++.. ....+.+||+||||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~LS~G~~q 156 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARA-----RARELLARLNIPERLWHLPPATFSGGEQQ 156 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhhhCCcccCCHHHHH
Confidence 43 3 4679999999988875 999998642 1111111111 12344455566543 34566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEE
Q 000497 1366 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILIL 1429 (1460)
Q Consensus 1366 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlVl 1429 (1460)
|++||||++++|++++|||||++||.++.+.+.+.|++.. +++|+|+|||+++.+. -||||+.+
T Consensus 157 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 157 RVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 9999999999999999999999999999999999998764 4789999999999886 58999876
No 467
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-34 Score=328.37 Aligned_cols=205 Identities=25% Similarity=0.307 Sum_probs=166.6
Q ss_pred CceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEeC-----
Q 000497 604 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG----- 673 (1460)
Q Consensus 604 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~----- 673 (1460)
+..++++|+++.|+. +.+|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 19 ~~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~ 92 (268)
T PRK14248 19 EHILEVKDLSIYYGE------KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILD 92 (268)
T ss_pred CceEEEEEEEEEeCC------ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccc
Confidence 346899999999852 235999999999999999999999999999999999864 6899998754
Q ss_pred ----------cEEEEcCCCCCCCccHHHHHccCCCCC--------hHHHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000497 674 ----------SIAYVPQVPWILSGTIRDNILFGKNYD--------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 735 (1460)
Q Consensus 674 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~~~--------~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~L 735 (1460)
.++|++|+|.++++|++||+.++.... +++..++++.+++..++. ...+....+|
T Consensus 93 ~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~L 165 (268)
T PRK14248 93 SNINVVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSL 165 (268)
T ss_pred ccccHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccC
Confidence 489999999999999999998753211 122333444444432221 2345667899
Q ss_pred ccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEE
Q 000497 736 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKW 814 (1460)
Q Consensus 736 SGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~ 814 (1460)
|||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++
T Consensus 166 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~ 243 (268)
T PRK14248 166 SGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEEL-ITE-LKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVE 243 (268)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHH-HHH-HhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999988775 333 334689999999999876 599999999999999
Q ss_pred ecCHHHHHh
Q 000497 815 IGSSADLAV 823 (1460)
Q Consensus 815 ~g~~~~l~~ 823 (1460)
.|+++++..
T Consensus 244 ~~~~~~~~~ 252 (268)
T PRK14248 244 YDQTEQIFT 252 (268)
T ss_pred eCCHHHHHh
Confidence 999888753
No 468
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-34 Score=327.04 Aligned_cols=202 Identities=26% Similarity=0.342 Sum_probs=166.6
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEeC-------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------- 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~------- 673 (1460)
.++++|+++.|.. . ++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~---~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~ 77 (251)
T PRK14251 4 IISAKDVHLSYGN---Y---EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSK 77 (251)
T ss_pred eEEEEeeEEEECC---e---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEccccc
Confidence 4789999999853 2 35999999999999999999999999999999999997 4799998765
Q ss_pred --------cEEEEcCCCCCCCccHHHHHccCCC---C-Ch----HHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000497 674 --------SIAYVPQVPWILSGTIRDNILFGKN---Y-DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 737 (1460)
Q Consensus 674 --------~i~y~~Q~p~l~~~ti~~nI~~g~~---~-~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSG 737 (1460)
.++|++|+|.+++.|++||+.++.. . ++ ++..++++.+++..+.. ......+.+|||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 150 (251)
T PRK14251 78 MDLVELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETK-------DNLDRNAQAFSG 150 (251)
T ss_pred chHHHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchH-------HHhccChhhCCH
Confidence 3899999999999999999987532 1 12 23445555555532111 123456779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000497 738 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 738 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 816 (1460)
|||||++||||++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 151 Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~ 228 (251)
T PRK14251 151 GQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEET-LME-LKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAG 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHH-HHH-HHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999888776 333 3446899999999999765 9999999999999999
Q ss_pred CHHHHH
Q 000497 817 SSADLA 822 (1460)
Q Consensus 817 ~~~~l~ 822 (1460)
+.+++.
T Consensus 229 ~~~~~~ 234 (251)
T PRK14251 229 PTEEMF 234 (251)
T ss_pred CHHHHH
Confidence 988874
No 469
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-34 Score=325.08 Aligned_cols=203 Identities=23% Similarity=0.349 Sum_probs=166.4
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC-----CeEEEEeC-------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT-----HGSIHASG------- 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~-----~G~i~~~~------- 673 (1460)
.++++|+++.|.. +.+|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|
T Consensus 4 ~l~~~~l~~~~~~------~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~ 77 (251)
T PRK14249 4 KIKIRGVNFFYHK------HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPN 77 (251)
T ss_pred eEEEEEEEEEECC------eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccc
Confidence 5789999999853 23599999999999999999999999999999999999987 69987754
Q ss_pred --------cEEEEcCCCCCCCccHHHHHccCCCC----Ch----HHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000497 674 --------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 737 (1460)
Q Consensus 674 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSG 737 (1460)
.++|++|+|.+++.|++||+.++..+ .+ ++..++++..++...+. +..+..+.+|||
T Consensus 78 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 150 (251)
T PRK14249 78 LDVVNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSG 150 (251)
T ss_pred cChHHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCH
Confidence 39999999999989999999886421 11 22233333444432221 234667889999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000497 738 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 738 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 816 (1460)
||||||+||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++|++.+.|
T Consensus 151 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~ 228 (251)
T PRK14249 151 GQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEEL-MQE-LKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYG 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeC
Confidence 999999999999999999999999999999999887765 332 3357899999999999876 8999999999999999
Q ss_pred CHHHHHh
Q 000497 817 SSADLAV 823 (1460)
Q Consensus 817 ~~~~l~~ 823 (1460)
+.+++..
T Consensus 229 ~~~~~~~ 235 (251)
T PRK14249 229 RTGEIFS 235 (251)
T ss_pred CHHHHHh
Confidence 9888743
No 470
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-34 Score=318.33 Aligned_cols=191 Identities=23% Similarity=0.390 Sum_probs=157.6
Q ss_pred EEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC---------cEEEE
Q 000497 608 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------SIAYV 678 (1460)
Q Consensus 608 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------~i~y~ 678 (1460)
+++|+++.|.. +++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 2 ~~~~l~~~~~~------~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~ 75 (210)
T cd03269 2 EVENVTKRFGR------VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYL 75 (210)
T ss_pred EEEEEEEEECC------EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEe
Confidence 57888888752 2359999999999999999999999999999999999999999999986 49999
Q ss_pred cCCCCCCCc-cHHHHHccCCC---CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHc
Q 000497 679 PQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 750 (1460)
Q Consensus 679 ~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly 750 (1460)
+|++.++.+ |++||+.+... .+ +++..+.++..++.... .....+||||||||++||||++
T Consensus 76 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la~al~ 144 (210)
T cd03269 76 PEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYA-----------NKRVEELSKGNQQKVQFIAAVI 144 (210)
T ss_pred ccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHH-----------hCcHhhCCHHHHHHHHHHHHHh
Confidence 999988875 99999986421 11 23344555555554332 3455689999999999999999
Q ss_pred cCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000497 751 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 751 ~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 816 (1460)
.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++.+.|
T Consensus 145 ~~p~~lllDEP~~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 145 HDPELLILDEPFSGLDPVNVELLKDV-IRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999988876 33212347899999999998865 9999999999998654
No 471
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-34 Score=327.01 Aligned_cols=201 Identities=26% Similarity=0.344 Sum_probs=166.8
Q ss_pred CceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC----------
Q 000497 604 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 673 (1460)
Q Consensus 604 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 673 (1460)
+..++++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 9 ~~~l~i~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~ 82 (265)
T PRK10575 9 DTTFALRNVSFRVPG---R---TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKA 82 (265)
T ss_pred CceEEEeeEEEEECC---E---EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHH
Confidence 456899999999852 2 359999999999999999999999999999999999999999999876
Q ss_pred ---cEEEEcCCCCCCCc-cHHHHHccCCC--------C---ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccH
Q 000497 674 ---SIAYVPQVPWILSG-TIRDNILFGKN--------Y---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 738 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~--------~---~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGG 738 (1460)
.++|++|++-++.+ |++||+.++.. . ++++..++++.+++...+.. ...+||||
T Consensus 83 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG 151 (265)
T PRK10575 83 FARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHR-----------LVDSLSGG 151 (265)
T ss_pred HhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcC-----------CcccCCHH
Confidence 38999999876654 99999987531 1 12345666777777543332 33489999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEec
Q 000497 739 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 739 QkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g 816 (1460)
||||++||||+..+|+++||||||++||+.+.+.+.+. +..... .+.|+|++||+++.+. .||+|++|++|++++.|
T Consensus 152 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~-l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~ 230 (265)
T PRK10575 152 ERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLAL-VHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQG 230 (265)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEec
Confidence 99999999999999999999999999999999887775 322112 3789999999999986 59999999999999999
Q ss_pred CHHHHH
Q 000497 817 SSADLA 822 (1460)
Q Consensus 817 ~~~~l~ 822 (1460)
+.+++.
T Consensus 231 ~~~~~~ 236 (265)
T PRK10575 231 TPAELM 236 (265)
T ss_pred CHHHhc
Confidence 988764
No 472
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.8e-34 Score=340.34 Aligned_cols=188 Identities=26% Similarity=0.397 Sum_probs=158.4
Q ss_pred cceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC---------------------cEEEEcCCCCC
Q 000497 626 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------------------SIAYVPQVPWI 684 (1460)
Q Consensus 626 ~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------------------~i~y~~Q~p~l 684 (1460)
.+|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.++| .++||+|++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 359999999999999999999999999999999999999999999875 39999999999
Q ss_pred CC-ccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEE
Q 000497 685 LS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIY 756 (1460)
Q Consensus 685 ~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~il 756 (1460)
++ .|++|||.++.. .++ ++..++++..+|.... .....+|||||||||+|||||+.+|+|+
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~-----------~~~~~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWA-----------DKKPGELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 87 699999998642 222 3445566666665433 2344589999999999999999999999
Q ss_pred EEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchh-hcCCEEEEEeCCeEEEecCHHHHHhc
Q 000497 757 MLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI-SAADMVVVMDKGQVKWIGSSADLAVS 824 (1460)
Q Consensus 757 llDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l-~~ad~i~~l~~G~i~~~g~~~~l~~~ 824 (1460)
|||||||+||+.+.+.+.+.+..-....++|+|++||+++.+ ..||+|++|++|++++.|+++++...
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 999999999999999888864321112378999999999986 45999999999999999999998643
No 473
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=337.64 Aligned_cols=214 Identities=21% Similarity=0.272 Sum_probs=172.9
Q ss_pred cEEEEEEEEEecCCC-CccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000497 1223 LIEFQNVTMRYKPSL-PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1301 (1460)
Q Consensus 1223 ~I~f~nvs~~Y~~~~-~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1301 (1460)
.++++|++++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+.
T Consensus 21 mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~------------ 88 (549)
T PRK13545 21 FDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA------------ 88 (549)
T ss_pred eeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee------------
Confidence 589999999997542 4699999999999999999999999999999999999999999999999762
Q ss_pred EEEeCCCccCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000497 1302 AVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1377 (1460)
Q Consensus 1302 ~iVpQdp~lf~-gTIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1377 (1460)
++++.+.+++ .|+++|+.... ..++++..+. ..+.++.+|++.........||||||||++|||||+.+|
T Consensus 89 -~i~~~~~l~~~lTV~EnL~l~~~~~~~~~~e~~e~-----i~elLe~lgL~~~ld~~~~~LSGGQrQRVaLArAL~~~P 162 (549)
T PRK13545 89 -LIAISSGLNGQLTGIENIELKGLMMGLTKEKIKEI-----IPEIIEFADIGKFIYQPVKTYSSGMKSRLGFAISVHINP 162 (549)
T ss_pred -eEEeccccCCCCcHHHHHHhhhhhcCCCHHHHHHH-----HHHHHHHcCChhHhhCCcccCCHHHHHHHHHHHHHHhCC
Confidence 2333444444 49999986432 2233332221 122333346665566667789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEcChhHHhccCCcHHHHHH
Q 000497 1378 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1455 (1460)
Q Consensus 1378 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~ 1455 (1460)
++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++..+.. .|.+++
T Consensus 163 ~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~~el~~~~~-~~~~~~ 241 (549)
T PRK13545 163 DILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDIKEVVDHYD-EFLKKY 241 (549)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhhHH-HHHHHH
Confidence 9999999999999999999999998754 47899999999999876 89999999999999999999987543 454443
No 474
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-34 Score=325.45 Aligned_cols=203 Identities=24% Similarity=0.310 Sum_probs=168.8
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEeC-------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------- 673 (1460)
-++++|+++.|.. . .+|+|+||++++||+++|+|+||||||||+++|+|..+| ++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~---~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~ 77 (251)
T PRK14270 4 KMESKNLNLWYGE---K---QALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKD 77 (251)
T ss_pred EEEEEEeEEEECC---e---eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEeccccc
Confidence 4788999998852 2 359999999999999999999999999999999999875 799998864
Q ss_pred --------cEEEEcCCCCCCCccHHHHHccCCCC----Ch----HHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000497 674 --------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 737 (1460)
Q Consensus 674 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSG 737 (1460)
.++|++|++.+++.|++||+.|+... ++ ++..++++.+++..++.. ..+.....|||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~ 150 (251)
T PRK14270 78 VDVVELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSG 150 (251)
T ss_pred ccHHHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCH
Confidence 38999999999999999999875321 22 244566677766443321 23456779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000497 738 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 738 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 816 (1460)
|||||++||||++.+|+++||||||++||+.+.+++.+. +.. ..+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 151 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-L~~-~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (251)
T PRK14270 151 GQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDL-MVE-LKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFN 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeC
Confidence 999999999999999999999999999999999988775 433 3346899999999998765 9999999999999999
Q ss_pred CHHHHHh
Q 000497 817 SSADLAV 823 (1460)
Q Consensus 817 ~~~~l~~ 823 (1460)
+.+++..
T Consensus 229 ~~~~~~~ 235 (251)
T PRK14270 229 KTEKIFL 235 (251)
T ss_pred CHHHHhc
Confidence 9888743
No 475
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.5e-34 Score=323.80 Aligned_cols=197 Identities=21% Similarity=0.313 Sum_probs=164.3
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|+++.|+. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 i~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (242)
T TIGR03411 3 LYLEGLSVSFDG------FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIAR 76 (242)
T ss_pred EEEEeeEEEcCC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHh
Confidence 678999998853 2359999999999999999999999999999999999999999999875
Q ss_pred -cEEEEcCCCCCCCc-cHHHHHccCCCCC---------------hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000497 674 -SIAYVPQVPWILSG-TIRDNILFGKNYD---------------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 736 (1460)
Q Consensus 674 -~i~y~~Q~p~l~~~-ti~~nI~~g~~~~---------------~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LS 736 (1460)
.++|++|++.++++ |++||+.++...+ +++..+.++..+++ ........+||
T Consensus 77 ~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS 145 (242)
T TIGR03411 77 AGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLA-----------DEADRLAGLLS 145 (242)
T ss_pred cCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCc-----------hhhcCChhhCC
Confidence 38999999998886 9999998753211 12233334433332 23345667999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEe
Q 000497 737 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 815 (1460)
Q Consensus 737 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 815 (1460)
||||||++||||++.+|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.++. ||+|++|++|++++.
T Consensus 146 ~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~ 223 (242)
T TIGR03411 146 HGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAEL-LKS-LAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAE 223 (242)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHH-HHH-HhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEee
Confidence 9999999999999999999999999999999999988876 332 3346899999999999875 999999999999999
Q ss_pred cCHHHHH
Q 000497 816 GSSADLA 822 (1460)
Q Consensus 816 g~~~~l~ 822 (1460)
|+++++.
T Consensus 224 ~~~~~~~ 230 (242)
T TIGR03411 224 GSLDQVQ 230 (242)
T ss_pred CCHHHHh
Confidence 9988774
No 476
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-34 Score=325.74 Aligned_cols=203 Identities=28% Similarity=0.355 Sum_probs=165.9
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCc--cC---CCeEEEEeC-------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM--ML---THGSIHASG------- 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~--~~---~~G~i~~~~------- 673 (1460)
.++++|+++.|.. +++|+|+||++++||+++|+||||||||||+++|+|.. +| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~------~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~ 78 (252)
T PRK14239 5 ILQVSDLSVYYNK------KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPR 78 (252)
T ss_pred eEEEEeeEEEECC------eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcc
Confidence 5789999999853 23599999999999999999999999999999999985 36 589998765
Q ss_pred --------cEEEEcCCCCCCCccHHHHHccCCC---C-Ch----HHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000497 674 --------SIAYVPQVPWILSGTIRDNILFGKN---Y-DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 737 (1460)
Q Consensus 674 --------~i~y~~Q~p~l~~~ti~~nI~~g~~---~-~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSG 737 (1460)
.++|++|+|.+++.|++||+.++.. . ++ ++..++++.+++...+. +..+....+|||
T Consensus 79 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 151 (252)
T PRK14239 79 TDTVDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSG 151 (252)
T ss_pred cchHhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCH
Confidence 3899999999999999999986521 1 11 22334455555533222 234566779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEec
Q 000497 738 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 738 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g 816 (1460)
|||||++||||+..+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 152 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 229 (252)
T PRK14239 152 GQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEET-LLG-LKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYN 229 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHH-HHH-HhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988875 333 334689999999999876 59999999999999999
Q ss_pred CHHHHHh
Q 000497 817 SSADLAV 823 (1460)
Q Consensus 817 ~~~~l~~ 823 (1460)
+.+++..
T Consensus 230 ~~~~~~~ 236 (252)
T PRK14239 230 DTKQMFM 236 (252)
T ss_pred CHHHHHh
Confidence 9888753
No 477
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-34 Score=328.11 Aligned_cols=201 Identities=28% Similarity=0.406 Sum_probs=167.6
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|++++|+.. ..+|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 77 (277)
T PRK13652 3 LIETRDLCYSYSGS-----KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVR 77 (277)
T ss_pred eEEEEEEEEEeCCC-----CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHH
Confidence 36789999998532 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCC--CCCccHHHHHccCC---CCChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000497 674 -SIAYVPQVPW--ILSGTIRDNILFGK---NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 743 (1460)
Q Consensus 674 -~i~y~~Q~p~--l~~~ti~~nI~~g~---~~~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv 743 (1460)
.++||+|+|. +++.|++||+.++. .++++ ++++.++.+++...+. .....||||||||+
T Consensus 78 ~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Gq~qrl 146 (277)
T PRK13652 78 KFVGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRD-----------RVPHHLSGGEKKRV 146 (277)
T ss_pred hheEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhc-----------CCcccCCHHHHHHH
Confidence 3899999983 67789999998753 23432 3556666666654433 33458999999999
Q ss_pred HHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHH
Q 000497 744 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADL 821 (1460)
Q Consensus 744 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l 821 (1460)
+||||++.+|+++||||||++||+.+.+.+.+. +..... ++.|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 147 ~laraL~~~p~llilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~ 225 (277)
T PRK13652 147 AIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDF-LNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEI 225 (277)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999888775 322112 3789999999999985 5999999999999999999988
Q ss_pred Hh
Q 000497 822 AV 823 (1460)
Q Consensus 822 ~~ 823 (1460)
..
T Consensus 226 ~~ 227 (277)
T PRK13652 226 FL 227 (277)
T ss_pred hc
Confidence 64
No 478
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-34 Score=331.60 Aligned_cols=207 Identities=29% Similarity=0.405 Sum_probs=164.7
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|+++.|+.... ...++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~i~nl~~~~~~~~~-~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 5 KDIILDNVSYTYAKKTP-FEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred ceEEEEEEEEEeCCCCc-cccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 45889999999864210 112469999999999999999999999999999999999999999998754
Q ss_pred -------cEEEEcCCCC--CCCccHHHHHccCCC---CChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000497 674 -------SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 737 (1460)
Q Consensus 674 -------~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSG 737 (1460)
.++|++|+|. +++.|++|||.|+.. .+.+ +..+.++..++..+ ........|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~----------~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPED----------YVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------HhcCChhhCCH
Confidence 3899999984 677899999988632 2221 22233333333211 13456679999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEe
Q 000497 738 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWI 815 (1460)
Q Consensus 738 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~ 815 (1460)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||+|++|++|++++.
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~ 232 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINL-FERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISI 232 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999888775 322112 3789999999999875 5999999999999999
Q ss_pred cCHHHHHh
Q 000497 816 GSSADLAV 823 (1460)
Q Consensus 816 g~~~~l~~ 823 (1460)
|+++++..
T Consensus 233 g~~~~~~~ 240 (289)
T PRK13645 233 GSPFEIFS 240 (289)
T ss_pred CCHHHHhc
Confidence 99888753
No 479
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-34 Score=330.74 Aligned_cols=206 Identities=25% Similarity=0.386 Sum_probs=166.2
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|+.... ...++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~~-~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (280)
T PRK13649 2 GINLQNVSYTYQAGTP-FEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDI 80 (280)
T ss_pred eEEEEEEEEEcCCCCc-cccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCH
Confidence 4688999999864211 112469999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCC--CCCCccHHHHHccCCC---CChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000497 674 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 739 (1460)
Q Consensus 674 -----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQ 739 (1460)
.|+|++|+| .+++.|++|||.++.. .+.+ +.+++++..++..+ .......+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~ 150 (280)
T PRK13649 81 KQIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQ 150 (280)
T ss_pred HHHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHH
Confidence 289999998 6788899999987532 2222 23344444444321 1244567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCH
Q 000497 740 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSS 818 (1460)
Q Consensus 740 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~ 818 (1460)
|||++||||++.+|+++||||||++||+.+.+.+.+. +......++|+|++||+++.+. .||++++|++|++++.|++
T Consensus 151 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (280)
T PRK13649 151 MRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTL-FKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKP 229 (280)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999888776 3321224789999999999886 4999999999999999998
Q ss_pred HHHHh
Q 000497 819 ADLAV 823 (1460)
Q Consensus 819 ~~l~~ 823 (1460)
+++..
T Consensus 230 ~~~~~ 234 (280)
T PRK13649 230 KDIFQ 234 (280)
T ss_pred HHHhc
Confidence 88754
No 480
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.5e-34 Score=319.66 Aligned_cols=198 Identities=23% Similarity=0.336 Sum_probs=162.3
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|+++.|.. +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~i~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~ 79 (225)
T PRK10247 6 PLLQLQNVGYLAGD------AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIY 79 (225)
T ss_pred ceEEEeccEEeeCC------ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHH
Confidence 46899999999852 2359999999999999999999999999999999999999999998876
Q ss_pred --cEEEEcCCCCCCCccHHHHHccCCC-----CChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000497 674 --SIAYVPQVPWILSGTIRDNILFGKN-----YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 746 (1460)
Q Consensus 674 --~i~y~~Q~p~l~~~ti~~nI~~g~~-----~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 746 (1460)
.++|++|+|.+++.|++||+.++.. .++++..+.++.+++.. +.......+|||||||||+||
T Consensus 80 ~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~la 149 (225)
T PRK10247 80 RQQVSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLI 149 (225)
T ss_pred HhccEEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHH
Confidence 4899999999998999999986421 12233445555555532 223556779999999999999
Q ss_pred HHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhcCCEEEEEe-CCeEEEecCHH
Q 000497 747 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMD-KGQVKWIGSSA 819 (1460)
Q Consensus 747 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~-~G~i~~~g~~~ 819 (1460)
||++++|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+.+.++.||++++|+ ++..+++|+|+
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 150 RNLQFMPKVLLLDEITSALDESNKHNVNEI-IHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999998877765 33211 23789999999999998899999995 56666777764
No 481
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=3.8e-34 Score=314.67 Aligned_cols=192 Identities=20% Similarity=0.273 Sum_probs=159.7
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRGE--RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DEPHRNILY 77 (198)
T ss_pred CEEEEEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccch-HHhhhheEE
Confidence 478999999964 46999999999999999999999999999999999999999999999999998765 456789999
Q ss_pred EeCCCccCC-ccHHHhcCcCCC-CC--hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000497 1304 VPQSPFLFE-GSLRDNLDPFHM-ND--DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1379 (1460)
Q Consensus 1304 VpQdp~lf~-gTIR~NLdp~~~-~s--d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1379 (1460)
+||++.+|+ .|+++|+..... .. ++++.++++..++ +........+||+|||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l---------~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 148 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGL---------TGFEDLPAAQLSAGQQRRLALARLWLSRAPL 148 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHHHHHHcCC---------HHHhcCChhhcCHHHHHHHHHHHHHhcCCCE
Confidence 999998887 599999854321 11 2234555555544 4334444567999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhHhhcCEEEE
Q 000497 1380 LCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEILI 1428 (1460)
Q Consensus 1380 LlLDEaTS~lD~~te~~Iq~~I~~~-~~~~TvI~IaHrl~ti~~~DrIlV 1428 (1460)
++|||||++||..+.+.+.+.|++. .++.|+|++||+...+. ||+++.
T Consensus 149 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~-~~~~~~ 197 (198)
T TIGR01189 149 WILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGLV-EARELR 197 (198)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccccc-ceEEee
Confidence 9999999999999999999999875 35789999999986543 477654
No 482
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-34 Score=328.42 Aligned_cols=204 Identities=26% Similarity=0.347 Sum_probs=169.0
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|+.... .++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~---~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 80 (277)
T PRK13642 4 ILEVENLVFKYEKESD---VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLR 80 (277)
T ss_pred eEEEEEEEEEcCCCCc---CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHh
Confidence 4789999999964211 2369999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCC--CCCccHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000497 674 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 743 (1460)
Q Consensus 674 -~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv 743 (1460)
.++|++|+|. +++.|+.|||.++.. ..+ ++++++++.+++.... ......||||||||+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv 149 (277)
T PRK13642 81 RKIGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFK-----------TREPARLSGGQKQRV 149 (277)
T ss_pred cceEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHh-----------hCCcccCCHHHHHHH
Confidence 3899999984 667899999987521 222 2345566666665322 234568999999999
Q ss_pred HHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHH
Q 000497 744 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 822 (1460)
Q Consensus 744 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~ 822 (1460)
+||||++.+|+++||||||++||+.+.+.+.+. +..... .+.|+|++||+++.+..||+|++|++|++++.|+++++.
T Consensus 150 ~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (277)
T PRK13642 150 AVAGIIALRPEIIILDESTSMLDPTGRQEIMRV-IHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELF 228 (277)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999988875 332122 278999999999999889999999999999999998876
Q ss_pred hc
Q 000497 823 VS 824 (1460)
Q Consensus 823 ~~ 824 (1460)
..
T Consensus 229 ~~ 230 (277)
T PRK13642 229 AT 230 (277)
T ss_pred cC
Confidence 43
No 483
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-34 Score=323.76 Aligned_cols=202 Identities=26% Similarity=0.353 Sum_probs=166.4
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEeC-------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------- 673 (1460)
.++++|+++.|.. . ++++|+||++++||+++|+||||||||||+++|+|..++ ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~ 76 (250)
T PRK14240 3 KISVKDLDLFYGD---F---QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSD 76 (250)
T ss_pred eEEEEEEEEEECC---c---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 4789999999853 2 359999999999999999999999999999999998763 699998865
Q ss_pred --------cEEEEcCCCCCCCccHHHHHccCCCC----C----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000497 674 --------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 737 (1460)
Q Consensus 674 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSG 737 (1460)
.++|++|+|.+++.|++|||.++... + +++..++++.+++..++. ...+..+.+|||
T Consensus 77 ~~~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 149 (250)
T PRK14240 77 IDVNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSG 149 (250)
T ss_pred cchHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCH
Confidence 38999999999889999999876321 1 123344555555543332 234556779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000497 738 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 738 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 816 (1460)
|||||++||||++.+|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 150 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (250)
T PRK14240 150 GQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEEL-IQE-LKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFG 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988765 433 3457899999999998765 9999999999999999
Q ss_pred CHHHHH
Q 000497 817 SSADLA 822 (1460)
Q Consensus 817 ~~~~l~ 822 (1460)
+.+++.
T Consensus 228 ~~~~~~ 233 (250)
T PRK14240 228 DTVDLF 233 (250)
T ss_pred CHHHHH
Confidence 988874
No 484
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-34 Score=326.81 Aligned_cols=203 Identities=25% Similarity=0.381 Sum_probs=166.9
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|+++.|.... +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~i~~l~~~~~~~~----~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~ 81 (269)
T PRK13648 6 SIIVFKNVSFQYQSDA----SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKL 81 (269)
T ss_pred ceEEEEEEEEEcCCCC----CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHH
Confidence 4589999999986421 2359999999999999999999999999999999999999999999876
Q ss_pred --cEEEEcCCCC--CCCccHHHHHccCCC---CChH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 --SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 --~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
.++|++|+|+ +++.|+++|+.++.. .+.+ +..++++..++.... .....+||||||||
T Consensus 82 ~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr 150 (269)
T PRK13648 82 RKHIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERA-----------DYEPNALSGGQKQR 150 (269)
T ss_pred HhheeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCCcccCCHHHHHH
Confidence 3899999996 456699999988632 2222 333445555544322 33556899999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHH
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 821 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l 821 (1460)
++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+..||+|++|++|++++.|+++++
T Consensus 151 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 229 (269)
T PRK13648 151 VAIAGVLALNPSVIILDEATSMLDPDARQNLLDL-VRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEI 229 (269)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988875 332112 37899999999999888999999999999999999887
Q ss_pred Hh
Q 000497 822 AV 823 (1460)
Q Consensus 822 ~~ 823 (1460)
..
T Consensus 230 ~~ 231 (269)
T PRK13648 230 FD 231 (269)
T ss_pred hc
Confidence 54
No 485
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.7e-34 Score=334.78 Aligned_cols=187 Identities=24% Similarity=0.342 Sum_probs=158.9
Q ss_pred cceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------cEEEEcCCCCCCCc-cHHHH
Q 000497 626 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------SIAYVPQVPWILSG-TIRDN 692 (1460)
Q Consensus 626 ~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~i~y~~Q~p~l~~~-ti~~n 692 (1460)
++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .+||++|++.++.. |++||
T Consensus 7 ~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~ 86 (302)
T TIGR01188 7 KAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGREN 86 (302)
T ss_pred eEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHHH
Confidence 359999999999999999999999999999999999999999999876 38999999998876 99999
Q ss_pred HccCCC---CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccc
Q 000497 693 ILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAV 765 (1460)
Q Consensus 693 I~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~l 765 (1460)
+.+... .+ .++..++++.+++.... .....+||||||||++||||++++|+++||||||++|
T Consensus 87 l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gL 155 (302)
T TIGR01188 87 LEMMGRLYGLPKDEAEERAEELLELFELGEAA-----------DRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGL 155 (302)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-----------CCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 986421 12 23456667777665432 2345689999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHhc
Q 000497 766 DAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVS 824 (1460)
Q Consensus 766 D~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~~ 824 (1460)
|+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 156 D~~~~~~l~~~-l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 156 DPRTRRAIWDY-IRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999988876 33212347899999999999875 999999999999999999998654
No 486
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=9.1e-34 Score=319.00 Aligned_cols=197 Identities=25% Similarity=0.294 Sum_probs=161.5
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|+++.|..... ..++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~~~~--~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~ 82 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEH--ELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEAR 82 (228)
T ss_pred ceEEEeeeEEEccCCCc--ceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHH
Confidence 35889999999864211 02359999999999999999999999999999999999999999998764
Q ss_pred ------cEEEEcCCCCCCCc-cHHHHHccCC---CCC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000497 674 ------SIAYVPQVPWILSG-TIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 739 (1460)
Q Consensus 674 ------~i~y~~Q~p~l~~~-ti~~nI~~g~---~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQ 739 (1460)
.++|++|+|.++.. |++|||.++. ..+ +++..+.++.+++...++. ....|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Ge 151 (228)
T PRK10584 83 AKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDH-----------LPAQLSGGE 151 (228)
T ss_pred HHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------ChhhCCHHH
Confidence 38999999988875 9999998642 112 2355666777777544433 345899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeEEEe
Q 000497 740 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWI 815 (1460)
Q Consensus 740 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~ 815 (1460)
|||++||||++.+|+++||||||++||+...+.+.+. +..... .++|+|++||+.+.+..||++++|++|+++++
T Consensus 152 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 152 QQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADL-LFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999998888776 322112 37899999999999888999999999998753
No 487
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=324.26 Aligned_cols=204 Identities=25% Similarity=0.332 Sum_probs=169.3
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEeC------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------ 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~------ 673 (1460)
..++++|++++|.. . ++|+|+||++++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 9 ~~l~i~~v~~~~~~---~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 82 (264)
T PRK14243 9 TVLRTENLNVYYGS---F---LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAP 82 (264)
T ss_pred eEEEEeeeEEEECC---E---EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEcccc
Confidence 46899999999853 2 35999999999999999999999999999999999876 4799998765
Q ss_pred ---------cEEEEcCCCCCCCccHHHHHccCCCC---C---hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccH
Q 000497 674 ---------SIAYVPQVPWILSGTIRDNILFGKNY---D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 738 (1460)
Q Consensus 674 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~~---~---~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGG 738 (1460)
.++|++|+|.+++.|++|||.++... . +++..++++.+++..++.. ..+..+.+||||
T Consensus 83 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgG 155 (264)
T PRK14243 83 DVDPVEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGG 155 (264)
T ss_pred ccChHHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHH
Confidence 38999999999988999999876421 1 2334455666666544431 235667799999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEe---------
Q 000497 739 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMD--------- 808 (1460)
Q Consensus 739 QkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~--------- 808 (1460)
||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|+
T Consensus 156 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~ 233 (264)
T PRK14243 156 QQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEEL-MHE-LKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGR 233 (264)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEecCHHHHHHhCCEEEEEeccccccccc
Confidence 99999999999999999999999999999999988776 333 3446899999999998765 99999998
Q ss_pred CCeEEEecCHHHHHh
Q 000497 809 KGQVKWIGSSADLAV 823 (1460)
Q Consensus 809 ~G~i~~~g~~~~l~~ 823 (1460)
+|++++.|+.+|+..
T Consensus 234 ~g~i~~~~~~~~~~~ 248 (264)
T PRK14243 234 YGYLVEFDRTEKIFN 248 (264)
T ss_pred CceEEEeCCHHHHHh
Confidence 799999999988854
No 488
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6e-34 Score=320.90 Aligned_cols=197 Identities=28% Similarity=0.425 Sum_probs=161.7
Q ss_pred EEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--------------
Q 000497 608 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 673 (1460)
Q Consensus 608 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 673 (1460)
+++|+++.|+. +++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (230)
T TIGR03410 2 EVSNLNVYYGQ------SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARA 75 (230)
T ss_pred EEEeEEEEeCC------eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHh
Confidence 57889998852 2359999999999999999999999999999999999999999998875
Q ss_pred cEEEEcCCCCCCCc-cHHHHHccCCC-CC---hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHH
Q 000497 674 SIAYVPQVPWILSG-TIRDNILFGKN-YD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 748 (1460)
Q Consensus 674 ~i~y~~Q~p~l~~~-ti~~nI~~g~~-~~---~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARa 748 (1460)
.++|++|++.++.. |++||+.++.. .. .+.+.++++..+. ..........+||||||||++||||
T Consensus 76 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~----------l~~~~~~~~~~LS~G~~qrv~la~a 145 (230)
T TIGR03410 76 GIAYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV----------LKEMLGRRGGDLSGGQQQQLAIARA 145 (230)
T ss_pred CeEEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh----------HHHHhhCChhhCCHHHHHHHHHHHH
Confidence 38999999998876 99999987532 11 2233444443321 1122345667899999999999999
Q ss_pred HccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHH
Q 000497 749 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 821 (1460)
Q Consensus 749 ly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 821 (1460)
++.+|+++||||||++||+.+.+++.+. +..... .++|+|++||+++.+.. ||+|+++++|++++.|+.+++
T Consensus 146 l~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 146 LVTRPKLLLLDEPTEGIQPSIIKDIGRV-IRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 9999999999999999999999988876 332122 37899999999999885 999999999999999998876
No 489
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=341.21 Aligned_cols=188 Identities=25% Similarity=0.391 Sum_probs=158.1
Q ss_pred cceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------------cEEEEcCCCCCCC-c
Q 000497 626 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILS-G 687 (1460)
Q Consensus 626 ~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------------~i~y~~Q~p~l~~-~ 687 (1460)
.+|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.++| .++||+|++.++. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 359999999999999999999999999999999999999999998865 4899999999886 4
Q ss_pred cHHHHHccCCC---CCh----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeC
Q 000497 688 TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDD 760 (1460)
Q Consensus 688 ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe 760 (1460)
|++|||.++.. ++. ++..++++.++|+.... ....+|||||||||+||||++.+|+++||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~-----------~~~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAH-----------SYPDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhh-----------cCcccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999997632 222 34555666676654333 3345899999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000497 761 VLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 824 (1460)
Q Consensus 761 ~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 824 (1460)
||++||+.+.+.+.+.+..-....++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999998887632211124789999999999875 5999999999999999999988653
No 490
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-34 Score=326.88 Aligned_cols=205 Identities=26% Similarity=0.357 Sum_probs=169.2
Q ss_pred CCceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEeC----
Q 000497 603 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---- 673 (1460)
Q Consensus 603 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~---- 673 (1460)
....++++|+++.|.. . ++|+|+||++++||+++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 22 ~~~~l~~~nl~~~~~~---~---~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~ 95 (272)
T PRK14236 22 EQTALEVRNLNLFYGD---K---QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIY 95 (272)
T ss_pred CCcEEEEEEEEEEECC---e---eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECc
Confidence 3456899999999852 2 35999999999999999999999999999999999987 4899998754
Q ss_pred -----------cEEEEcCCCCCCCccHHHHHccCCC---C-C----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000497 674 -----------SIAYVPQVPWILSGTIRDNILFGKN---Y-D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 734 (1460)
Q Consensus 674 -----------~i~y~~Q~p~l~~~ti~~nI~~g~~---~-~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~ 734 (1460)
.++|++|++.+++.|++||+.++.. . . +++..++++..++..++. +..+..+.+
T Consensus 96 ~~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 168 (272)
T PRK14236 96 DKKVDVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFG 168 (272)
T ss_pred ccccCHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCccc
Confidence 4899999999998999999987532 1 1 123445555555544332 234667889
Q ss_pred cccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEE
Q 000497 735 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVK 813 (1460)
Q Consensus 735 LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~ 813 (1460)
|||||||||+||||++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|+++
T Consensus 169 LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-L~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~ 246 (272)
T PRK14236 169 LSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEEL-ITE-LKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLV 246 (272)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999998888776 333 334689999999999876 59999999999999
Q ss_pred EecCHHHHH
Q 000497 814 WIGSSADLA 822 (1460)
Q Consensus 814 ~~g~~~~l~ 822 (1460)
+.|+++++.
T Consensus 247 ~~g~~~~~~ 255 (272)
T PRK14236 247 EYGDTDTLF 255 (272)
T ss_pred ecCCHHHHh
Confidence 999988874
No 491
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.5e-34 Score=319.18 Aligned_cols=188 Identities=23% Similarity=0.397 Sum_probs=155.7
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|+++.|+.+ ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-----~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (214)
T TIGR02673 2 IEFHNVSKAYPGG-----VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPL 76 (214)
T ss_pred EEEEeeeEEeCCC-----ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHH
Confidence 5788999988421 2359999999999999999999999999999999999999999998765
Q ss_pred ---cEEEEcCCCCCCC-ccHHHHHccCCC---CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000497 674 ---SIAYVPQVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 742 (1460)
Q Consensus 674 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqR 742 (1460)
.++|++|+|.++. .|++||+.++.. .+ +++..+.++..++...+.. ...+||||||||
T Consensus 77 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr 145 (214)
T TIGR02673 77 LRRRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADA-----------FPEQLSGGEQQR 145 (214)
T ss_pred HHhheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHH
Confidence 4899999999886 599999987521 22 2345566666666544332 335899999999
Q ss_pred HHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCe
Q 000497 743 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQ 811 (1460)
Q Consensus 743 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~ 811 (1460)
++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|+
T Consensus 146 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 146 VAIARAIVNSPPLLLADEPTGNLDPDLSERILDL-LKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 9999999999999999999999999999988876 33212347899999999999875 99999999985
No 492
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=7.5e-34 Score=325.30 Aligned_cols=202 Identities=25% Similarity=0.313 Sum_probs=166.0
Q ss_pred ceEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------
Q 000497 605 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 673 (1460)
Q Consensus 605 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 673 (1460)
..++++|+++.|+. . .+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~~l~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~ 77 (257)
T PRK10619 4 NKLNVIDLHKRYGE---H---EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDG 77 (257)
T ss_pred ccEEEeeeEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccc
Confidence 45889999999852 2 359999999999999999999999999999999999999999998765
Q ss_pred ---------------cEEEEcCCCCCCCc-cHHHHHccCC----CCCh----HHHHHHHHHhcchHHHhhccCCCccccc
Q 000497 674 ---------------SIAYVPQVPWILSG-TIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIG 729 (1460)
Q Consensus 674 ---------------~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~~~~gd~t~vg 729 (1460)
.++|++|+|.++.. |++||+.++. ..++ ++..+.++..++...+ ..
T Consensus 78 ~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~ 147 (257)
T PRK10619 78 QLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QG 147 (257)
T ss_pred ccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hh
Confidence 38999999998875 9999998642 1222 2333444444443221 13
Q ss_pred CCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEe
Q 000497 730 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMD 808 (1460)
Q Consensus 730 ~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~ 808 (1460)
.....||||||||++||||++++|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|+
T Consensus 148 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~ 226 (257)
T PRK10619 148 KYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRI-MQQLAEEGKTMVVVTHEMGFARHVSSHVIFLH 226 (257)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEE
Confidence 45679999999999999999999999999999999999999988875 33212347899999999999885 99999999
Q ss_pred CCeEEEecCHHHHHh
Q 000497 809 KGQVKWIGSSADLAV 823 (1460)
Q Consensus 809 ~G~i~~~g~~~~l~~ 823 (1460)
+|++++.|+++++..
T Consensus 227 ~G~i~~~~~~~~~~~ 241 (257)
T PRK10619 227 QGKIEEEGAPEQLFG 241 (257)
T ss_pred CCEEEEeCCHHHhhh
Confidence 999999999888753
No 493
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=8.4e-34 Score=302.26 Aligned_cols=161 Identities=25% Similarity=0.393 Sum_probs=144.1
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--cEEEEcCCCCC
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPWI 684 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~p~l 684 (1460)
++++|+++.|+.. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.+++ .++|++|+|.+
T Consensus 1 i~~~~~~~~~~~~-----~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~~ 75 (166)
T cd03223 1 IELENLSLATPDG-----RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYL 75 (166)
T ss_pred CEEEEEEEEcCCC-----CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCcc
Confidence 3578999998532 2359999999999999999999999999999999999999999999987 79999999999
Q ss_pred CCccHHHHHccCCCCChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEeCCccc
Q 000497 685 LSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSA 764 (1460)
Q Consensus 685 ~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~ 764 (1460)
++.|++|||.++ ....||||||||++||||++++|++++|||||++
T Consensus 76 ~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~ 121 (166)
T cd03223 76 PLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSA 121 (166)
T ss_pred ccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccc
Confidence 989999999864 2458999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCC
Q 000497 765 VDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKG 810 (1460)
Q Consensus 765 lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G 810 (1460)
||+.+.+.+.+. +.. . ++|+|++||+.+....||++++|++|
T Consensus 122 LD~~~~~~l~~~-l~~-~--~~tiiivsh~~~~~~~~d~i~~l~~~ 163 (166)
T cd03223 122 LDEESEDRLYQL-LKE-L--GITVISVGHRPSLWKFHDRVLDLDGE 163 (166)
T ss_pred cCHHHHHHHHHH-HHH-h--CCEEEEEeCChhHHhhCCEEEEEcCC
Confidence 999999988876 332 2 58999999999988789999999875
No 494
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-34 Score=324.09 Aligned_cols=198 Identities=24% Similarity=0.400 Sum_probs=165.1
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-------------
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 673 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 673 (1460)
++++|++++|+. . .+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 3 l~~~~l~~~~~~---~---~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (255)
T PRK11231 3 LRTENLTVGYGT---K---RILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLAR 76 (255)
T ss_pred EEEEeEEEEECC---E---EEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhh
Confidence 678999998852 2 359999999999999999999999999999999999999999998876
Q ss_pred cEEEEcCCCCCCCc-cHHHHHccCCC-----C------ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHH
Q 000497 674 SIAYVPQVPWILSG-TIRDNILFGKN-----Y------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 741 (1460)
Q Consensus 674 ~i~y~~Q~p~l~~~-ti~~nI~~g~~-----~------~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkq 741 (1460)
.++|++|++.++.+ |++||+.++.. + +.++..++++.+++.... ......|||||||
T Consensus 77 ~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~q 145 (255)
T PRK11231 77 RLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLA-----------DRRLTDLSGGQRQ 145 (255)
T ss_pred heEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHH-----------cCCcccCCHHHHH
Confidence 38999999988876 99999987631 1 122445555665654332 3455689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHH
Q 000497 742 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSAD 820 (1460)
Q Consensus 742 Rv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~ 820 (1460)
|++||||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+. .||++++|++|+++..|++++
T Consensus 146 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 224 (255)
T PRK11231 146 RAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRL-MRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEE 224 (255)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHH
Confidence 99999999999999999999999999999888776 3321224789999999999876 499999999999999999887
Q ss_pred HH
Q 000497 821 LA 822 (1460)
Q Consensus 821 l~ 822 (1460)
+.
T Consensus 225 ~~ 226 (255)
T PRK11231 225 VM 226 (255)
T ss_pred hc
Confidence 64
No 495
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4.3e-34 Score=318.57 Aligned_cols=188 Identities=23% Similarity=0.376 Sum_probs=155.4
Q ss_pred EEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC--------------
Q 000497 608 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 673 (1460)
Q Consensus 608 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 673 (1460)
+++|+++.|+.. +.+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~ 76 (214)
T cd03292 2 EFINVTKTYPNG-----TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYL 76 (214)
T ss_pred EEEEEEEEeCCC-----ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHH
Confidence 578889988532 2359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCCc-cHHHHHccCCC---CC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000497 674 --SIAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 743 (1460)
Q Consensus 674 --~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv 743 (1460)
.++|++|+|.++.. |++||+.++.. .+ +++..+.++.++++...+ ....+||||||||+
T Consensus 77 ~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv 145 (214)
T cd03292 77 RRKIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHR-----------ALPAELSGGEQQRV 145 (214)
T ss_pred HHheEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CChhhcCHHHHHHH
Confidence 38999999998875 99999987531 12 234456666666654333 23458999999999
Q ss_pred HHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeE
Q 000497 744 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 812 (1460)
Q Consensus 744 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i 812 (1460)
+||||++.+|+++||||||++||+++.+.+.+. +.....+++|+|++||+.+.+.. ||++++|++|++
T Consensus 146 ~laral~~~p~llllDEPt~~LD~~~~~~~~~~-l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 146 AIARAIVNSPTILIADEPTGNLDPDTTWEIMNL-LKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999988876 33212347899999999999875 999999999974
No 496
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=8e-34 Score=317.79 Aligned_cols=197 Identities=25% Similarity=0.287 Sum_probs=157.5
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1303 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~i 1303 (1460)
+.++|++.+|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ....
T Consensus 23 l~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~-----~~~~-- 93 (224)
T cd03220 23 LGILGRKGEVGE--FWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSLL-----GLGG-- 93 (224)
T ss_pred hhhhhhhhhcCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchhh-----cccc--
Confidence 678888888864 4699999999999999999999999999999999999999999999999986421 1111
Q ss_pred EeCCCccCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000497 1304 VPQSPFLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1380 (1460)
Q Consensus 1304 VpQdp~lf~gTIR~NLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1380 (1460)
.+..+.|+++|+..... .+.++..+ ...+.++.+|++........+||+|||||++||||++++|+++
T Consensus 94 ----~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 164 (224)
T cd03220 94 ----GFNPELTGRENIYLNGRLLGLSRKEIDE-----KIDEIIEFSELGDFIDLPVKTYSSGMKARLAFAIATALEPDIL 164 (224)
T ss_pred ----cCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 12235699999864311 12222111 1222333346655555566689999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEEc
Q 000497 1381 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1381 lLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1438 (1460)
||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 165 llDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 165 LIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999998764 46899999999999875 8999999999998865
No 497
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-33 Score=317.21 Aligned_cols=197 Identities=27% Similarity=0.408 Sum_probs=164.8
Q ss_pred EEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC-----------cE
Q 000497 607 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 675 (1460)
Q Consensus 607 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 675 (1460)
++++|++++|.. . ..|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 2 l~~~~l~~~~~~-----~---~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i 73 (232)
T PRK10771 2 LKLTDITWLYHH-----L---PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPV 73 (232)
T ss_pred eEEEEEEEEECC-----c---cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccE
Confidence 578999999852 1 2489999999999999999999999999999999999999999876 38
Q ss_pred EEEcCCCCCCCc-cHHHHHccCCC--C-----ChHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHH
Q 000497 676 AYVPQVPWILSG-TIRDNILFGKN--Y-----DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 747 (1460)
Q Consensus 676 ~y~~Q~p~l~~~-ti~~nI~~g~~--~-----~~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSGGQkqRv~lAR 747 (1460)
+|++|+|.++.+ |++|||.++.. . ++++..++++..+++..+...| ..||||||||++|||
T Consensus 74 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lar 142 (232)
T PRK10771 74 SMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALAR 142 (232)
T ss_pred EEEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHH
Confidence 999999998875 99999987531 1 1234566677777765444333 489999999999999
Q ss_pred HHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHh
Q 000497 748 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 823 (1460)
Q Consensus 748 aly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 823 (1460)
|++++|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++.+.|+++++..
T Consensus 143 al~~~p~lllLDEP~~gLD~~~~~~~~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~ 219 (232)
T PRK10771 143 CLVREQPILLLDEPFSALDPALRQEMLTL-VSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLS 219 (232)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999888776 322122 37899999999999875 99999999999999999888753
No 498
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=321.51 Aligned_cols=198 Identities=24% Similarity=0.359 Sum_probs=162.3
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|.. +.+|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 75 (242)
T PRK11124 2 SIQLNGINCFYGA------HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDK 75 (242)
T ss_pred EEEEEeeEEEECC------eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchh
Confidence 3678999999853 2359999999999999999999999999999999999999999998864
Q ss_pred -------cEEEEcCCCCCCCc-cHHHHHccCC----CCC----hHHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000497 674 -------SIAYVPQVPWILSG-TIRDNILFGK----NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 737 (1460)
Q Consensus 674 -------~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~vg~~g~~LSG 737 (1460)
.++|++|+|.++.+ |++|||.++. ... .++..+.++..+++.. ......+|||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~ 144 (242)
T PRK11124 76 AIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPY-----------ADRFPLHLSG 144 (242)
T ss_pred hHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCH
Confidence 38999999998865 9999997421 111 1233444444444332 3444569999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000497 738 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 816 (1460)
Q Consensus 738 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 816 (1460)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+.+.+.. ||++++|++|+++++|
T Consensus 145 G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~ 223 (242)
T PRK11124 145 GQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSI-IRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQG 223 (242)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999888775 33212347899999999999865 9999999999999999
Q ss_pred CHHHH
Q 000497 817 SSADL 821 (1460)
Q Consensus 817 ~~~~l 821 (1460)
+++++
T Consensus 224 ~~~~~ 228 (242)
T PRK11124 224 DASCF 228 (242)
T ss_pred CHHHh
Confidence 88765
No 499
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=323.63 Aligned_cols=199 Identities=21% Similarity=0.295 Sum_probs=163.6
Q ss_pred eEEEEcceEeccCCCccccccceeeeeeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEeC------------
Q 000497 606 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 673 (1460)
Q Consensus 606 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 673 (1460)
.++++|+++.|+. .++|+|+||++++|++++|+||||||||||+++|.|+++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 78 (255)
T PRK11300 5 LLSVSGLMMRFGG------LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIA 78 (255)
T ss_pred eEEEeeEEEEECC------EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHH
Confidence 5889999999852 2359999999999999999999999999999999999999999999876
Q ss_pred --cEEEEcCCCCCCCc-cHHHHHccCCC-----------C-----Ch------HHHHHHHHHhcchHHHhhccCCCcccc
Q 000497 674 --SIAYVPQVPWILSG-TIRDNILFGKN-----------Y-----DP------QSYSETLKACTLDVDISLMVGGDMAYI 728 (1460)
Q Consensus 674 --~i~y~~Q~p~l~~~-ti~~nI~~g~~-----------~-----~~------~~~~~v~~~~~l~~di~~~~~gd~t~v 728 (1460)
.++|++|+|.++.. |++|||.++.. + ++ ++..+.++..++. ...
T Consensus 79 ~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~ 147 (255)
T PRK11300 79 RMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLL-----------EHA 147 (255)
T ss_pred hcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChh-----------hhh
Confidence 27899999999876 99999997531 0 00 1222333333332 234
Q ss_pred cCCCCccccHHHHHHHHHHHHccCCCEEEEeCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEE
Q 000497 729 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVV 806 (1460)
Q Consensus 729 g~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~ 806 (1460)
..+..+||||||||++||||++.+|+++||||||++||+...+.+.+. +..... .++|+|++||+++.+.. ||++++
T Consensus 148 ~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~ 226 (255)
T PRK11300 148 NRQAGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDEL-IAELRNEHNVTVLLIEHDMKLVMGISDRIYV 226 (255)
T ss_pred hCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHhhcCCEEEEEeCCHHHHHHhCCEEEE
Confidence 566779999999999999999999999999999999999999888776 332122 26899999999999865 999999
Q ss_pred EeCCeEEEecCHHHHH
Q 000497 807 MDKGQVKWIGSSADLA 822 (1460)
Q Consensus 807 l~~G~i~~~g~~~~l~ 822 (1460)
|++|++++.|+.+++.
T Consensus 227 l~~g~i~~~~~~~~~~ 242 (255)
T PRK11300 227 VNQGTPLANGTPEEIR 242 (255)
T ss_pred EECCeEEecCCHHHHh
Confidence 9999999999988764
No 500
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=5.3e-34 Score=358.96 Aligned_cols=215 Identities=28% Similarity=0.448 Sum_probs=175.4
Q ss_pred EEEEEEEEEecCCCCccceeeEEEEeCCcEEEEECCCCChHHHHHHHHhccC--CCCCceEEEC----------------
Q 000497 1224 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVD---------------- 1285 (1460)
Q Consensus 1224 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~--~~~~G~I~ID---------------- 1285 (1460)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~ 78 (520)
T TIGR03269 1 IEVKNLTKKFDG--KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKV 78 (520)
T ss_pred CEEEEEEEEECC--eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccc
Confidence 578999999953 46999999999999999999999999999999999997 7999999997
Q ss_pred -------CEeCC-------CCC---hHHHhcccEEEeCC-CccCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHH
Q 000497 1286 -------GLNII-------NTP---VRDLRGRFAVVPQS-PFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEV 1343 (1460)
Q Consensus 1286 -------G~di~-------~i~---~~~lR~~i~iVpQd-p~lf~g-TIR~NLdp~~---~~sd~ei~~aL~~~~l~~~i 1343 (1460)
|.++. ..+ ...+|++++++||+ +.+|+. |+++|+.+.. ..+..+.. ..+.+.+
T Consensus 79 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l 153 (520)
T TIGR03269 79 GEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAV-----GRAVDLI 153 (520)
T ss_pred ccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHH
Confidence 33331 111 23467889999998 567764 9999985421 12222211 1223445
Q ss_pred HhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh
Q 000497 1344 EAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL 1421 (1460)
Q Consensus 1344 ~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~ 1421 (1460)
+.+|++........+||||||||++|||||+.+|++|||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.
T Consensus 154 ~~~gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~ 233 (520)
T TIGR03269 154 EMVQLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIE 233 (520)
T ss_pred HHcCChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHH
Confidence 55577666666677899999999999999999999999999999999999999999998764 3789999999999987
Q ss_pred h-cCEEEEEeCCeEEEEcChhHHhc
Q 000497 1422 N-MDEILILDHGHLVEQGNPQTLLQ 1445 (1460)
Q Consensus 1422 ~-~DrIlVl~~G~IvE~G~p~eLl~ 1445 (1460)
+ ||+|++|++|++++.|+++++.+
T Consensus 234 ~~~d~i~~l~~G~i~~~g~~~~~~~ 258 (520)
T TIGR03269 234 DLSDKAIWLENGEIKEEGTPDEVVA 258 (520)
T ss_pred HhcCEEEEEeCCEEeeecCHHHHHH
Confidence 5 89999999999999999998865
Done!