Query 000497
Match_columns 1460
No_of_seqs 451 out of 5582
Neff 7.8
Searched_HMMs 29240
Date Tue Mar 26 15:59:42 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000497.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_272-275//hhsearch_pdb/000497hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1611.1 109.0 1215 224-1458 2-1316(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1284.5 101.6 1156 279-1459 47-1271(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 753.2 60.6 513 941-1458 137-653 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 717.7 50.5 511 940-1458 108-625 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 685.7 55.1 560 890-1458 28-590 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 683.3 60.1 568 883-1458 7-578 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 664.3 56.2 561 890-1460 5-578 (578)
8 3b60_A Lipid A export ATP-bind 1.0 1 1 663.5 66.2 560 889-1458 15-579 (582)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 660.3 68.9 559 890-1458 16-579 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 651.7 65.0 562 890-1458 10-583 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1611.11 Aligned_cols=1215 Identities=18% Similarity=0.199 Sum_probs=910.3
Q ss_pred HHCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC-------------CCCCCCHHHHHHHH-HHHHHHHHHHH
Q ss_conf 980014-9988789989999999158999999999984210-------------89984079999999-74979999999
Q 000497 224 MNRGVI-KQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSC-------------NCTNPSLVRAICCA-YGYPYICLGLL 288 (1460)
Q Consensus 224 ~~~g~~-~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~-------------~~~~~~l~~~l~~~-~~~~~~~~~~~ 288 (1460)
++.|.+ ++|+..|.+.+.|++..+...+.+++.|.....+ ..++.++ +.+|+. -++..++..+-
T Consensus 2 ~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~Lfrya~~~d~~l~~~g 80 (1321)
T 4f4c_A 2 LRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVSI-PQLYRYTTTLEKLLLFIG 80 (1321)
T ss_dssp --CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCCH-HHHTTTCCHHHHHHHHHH
T ss_pred CCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCH-HHHHHCCCHHHHHHHHHH
T ss_conf 8773100687635445679501110000113454243554334310012232025687799-997315676789999999
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHHCC--------C-------CC-CH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999989999---99999998426--------8-------87-24-----699999999999999999999999999
Q 000497 289 KVVNDSIGFAGPL---LLNKLIKFLQQ--------G-------SG-HL-----DGYVLAIALGLTSILKSFFDTQYSFHL 344 (1460)
Q Consensus 289 ~l~~~~~~~~~P~---ll~~li~~l~~--------~-------~~-~~-----~g~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (1460)
.++..+.+.+.|+ ++.++++.+.+ . .. .. .-..++..++...++..++...+.+..
T Consensus 81 ~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~ 160 (1321)
T 4f4c_A 81 TLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCY 160 (1321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997010001454300034431001689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999982499422478985599999996599999999-99999997999999999999988679999
Q 000497 345 SKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKFAFV 423 (1460)
Q Consensus 345 ~r~~~~~r~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nLms~D~~ri~~~~-~~~~~~w~~pl~i~i~~~lL~~~lG~a~l 423 (1460)
...+.++-..+...+|+|.++++..-.++.++|+++|.++.|++++.+++ ..+..++..++.++.++.+++..-..-++
T Consensus 161 ~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~l~l 240 (1321)
T 4f4c_A 161 LYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQLTL 240 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999997889899879984899999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999964699998171799999999999999999999999999
Q 000497 424 SGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDA 503 (1460)
Q Consensus 424 ~g~~v~il~~~~~~~~~~~~~~~q~~~~~~~d~Rv~~~~e~L~~ik~IK~~~we~~~~~~i~~~R~~El~~~~~~~~l~~ 503 (1460)
+.++++.+..++..++++++.+.+++.++..+++.+.++|+++|||+||+|+||+.+.++..+..++..+...+.....+
T Consensus 241 v~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1321)
T 4f4c_A 241 VMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFLG 320 (1321)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999983999998214299999999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 99999999979--9999999999880998777589999999999999999999999999999999999999619998862
Q 000497 504 WCVFFWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH 581 (1460)
Q Consensus 504 ~~~~~~~~~p~--~~~~~tf~~y~~~~~~L~~~~~Ft~lsl~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~ 581 (1460)
........... ++.+++++.+.+.++.++++.+|+.+.++..+..|+..++..++.+.++.+|++||.+||+.++..+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 400 (1321)
T 4f4c_A 321 ISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPVID 400 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999999599869999999999999999999899999999999999999999971785345
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCC
Q ss_conf 44310299985457886678998549997116860578863336530100157419969999968998478999998638
Q 000497 582 ELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGE 661 (1460)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~L~~i~l~i~~G~l~~IvG~vGsGKSTLL~allGe 661 (1460)
........+ ...+..|+++|++|+|+..++.|+ |+|+||++++|++++||||+|||||||+++|+|+
T Consensus 401 ~~~~~~~~~----------~~~~g~I~~~nvsF~Y~~~~~~~v---L~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~ 467 (1321)
T 4f4c_A 401 SSSKAGRKD----------MKIKGDITVENVHFTYPSRPDVPI---LRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRY 467 (1321)
T ss_dssp CSSSCCCCC----------CCCCCCEEEEEEEECCSSSTTSCS---EEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTS
T ss_pred CCCCCCCCC----------CCCCCCEEEEEEEEECCCCCCCCE---EECEEEEECCCCEEEEEECCCCCHHHHHHHHCCC
T ss_conf 666556567----------788876799985540799998743---3331886228827899805898577888875456
Q ss_pred CCCCCEEEEEEC-------------CEEEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCC
Q ss_conf 568870899709-------------1999848987877568899705999-99688999999813158886035998530
Q 000497 662 MMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAY 727 (1460)
Q Consensus 662 ~~~~~G~v~~~g-------------~iayv~Q~pwL~n~TIreNIlfg~~-~d~~~y~~vi~ac~L~~Dl~~lp~GD~T~ 727 (1460)
+++.+|+|.++| +||||+|+|||+|+||||||+||++ .+++++.++++.|++++|++.||+||+|+
T Consensus 468 ~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~ 547 (1321)
T 4f4c_A 468 YDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTL 547 (1321)
T ss_dssp SCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSE
T ss_pred CCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCE
T ss_conf 51644861579965011259998504666587533207861678864155220999999998756546887088888607
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHCCCEEEEE
Q ss_conf 25797756608999999999880499989970776540599999999996319466896599983782112008989999
Q 000497 728 IGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVM 807 (1460)
Q Consensus 728 iGe~G~~LSGGQKqRIaLARAlY~~~~i~lLDD~~SaLD~~t~~~I~~~~i~g~ll~~kTvIlvTH~~~~l~~aD~Iivl 807 (1460)
|||+|.+||||||||||||||+|++|+|++||||+||||+++++. +++++.+ ++++||+|++||+++.++.||+|++|
T Consensus 548 vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~-i~~~l~~-~~~~~T~iiiaHrls~i~~aD~Iivl 625 (1321)
T 4f4c_A 548 VGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGI-VQQALDK-AAKGRTTIIIAHRLSTIRNADLIISC 625 (1321)
T ss_dssp ESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHH-HHHHHHH-HHTTSEEEEECSCTTTTTTCSEEEEE
T ss_pred ECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH-HHHHHHH-HHCCCEEEEECCCHHHHHHCCEEEEE
T ss_conf 558988777778799999998725999899845544688789999-9999999-84798899973638789868989996
Q ss_pred ECCEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHH--HH--HCCCC---C--C-H---HHHHHHH--------------
Q ss_conf 398699951977887300367655543210112322--22--00124---4--0-2---3444210--------------
Q 000497 808 DKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQK--QE--MRTNA---S--S-A---NKQILLQ-------------- 860 (1460)
Q Consensus 808 ~~G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~---~--~-~---~~~~~~~-------------- 860 (1460)
++|+|+++|+|+||++.++.+.++..........+. +. ..... . . . .......
T Consensus 626 ~~G~ive~Gth~eL~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1321)
T 4f4c_A 626 KNGQVVEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSI 705 (1321)
T ss_dssp ETTEEEEEECHHHHHTTTCHHHHHHHHHHHHHHHHHHHCC----------------------------------------
T ss_pred ECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 39965136899999985327999999622122223323344332232111222223422222221102211101321245
Q ss_pred ------CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf ------01346777414667799888506521687999864145-89999999999999999832455655310345788
Q 000497 861 ------EKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG-WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSS 933 (1460)
Q Consensus 861 ------~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~ 933 (1460)
+++.....+........+.++.+.....+|+.|....+ |...++.++...+.........+|+..|.+.....
T Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 785 (1321)
T 4f4c_A 706 TNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGN 785 (1321)
T ss_dssp ----------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSC
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 67740257775315403899999999707863109999999877899999999999999999999999999999875179
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCHHHHHHHHHHHHHH
Q ss_conf --887641368999999999999999999999999999999999999999884286323245--6712699999601433
Q 000497 934 --QTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQ--TPGGRILNRFSSDLYM 1009 (1460)
Q Consensus 934 --~~~~~~~~~l~v~~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~il~~p~~ff~~--~~~G~ilnRfs~D~~~ 1009 (1460)
.......+|..+|++++++..++.++..+++...+.+.+.++|.+++++++++|++|||. +|+|+++|||++|++.
T Consensus 786 ~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~ 865 (1321)
T 4f4c_A 786 PADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPN 865 (1321)
T ss_dssp SSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHH
T ss_conf 34556678999999999999999999999999999999999999999988873499333216788848888502505999
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH
Q ss_conf 10102799999999998677866368778789999999999999999999999999999999862051476798732474
Q 000497 1010 IDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGS 1089 (1460)
Q Consensus 1010 id~~l~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~ipl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl 1089 (1460)
+|..++..+..++..++.+++.++++.+..|++.++++++..++.+...++.+..+.......++.++...++.|+++|+
T Consensus 866 i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi 945 (1321)
T 4f4c_A 866 LRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENV 945 (1321)
T ss_dssp HHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999865377770221378689999999988899999999999999999999999888988999999627
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99976293899999999999999999999999999999999999999999999999984069787776129999999999
Q 000497 1090 STIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSY 1169 (1460)
Q Consensus 1090 ~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~ 1169 (1460)
.|||+|++|+.+.+++.+.++...+..+.....+.+.......+..+...++........ ........++.+...+.+
T Consensus 946 ~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv--~~~~~~~~~~~~~~~~~~ 1023 (1321)
T 4f4c_A 946 RTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALI--ITDPPTMQPMRVLRVMYA 1023 (1321)
T ss_dssp HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTT--SSSSCSSCHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCHHHHHHHHHH
T ss_conf 988861414889999999999999999999999999999999999999999998757887--537654214789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEE
Q ss_conf 99999999999999999999989999999730386100025789999999874099999999966998-85311247997
Q 000497 1170 AAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSL-PAALHDINFTI 1248 (1460)
Q Consensus 1170 ~~~~~~~l~~li~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~-~~vL~~isl~I 1248 (1460)
......++..+...+.+++..+.+++|+.++.+.++|... ...+++.||..|.|+|+||+|+|+.+. .+||+|+||+|
T Consensus 1024 ~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~-~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I 1102 (1321)
T 4f4c_A 1024 ITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDS-LSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSV 1102 (1321)
T ss_dssp HHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCT-TCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEE
T ss_conf 9877889999999999999999999989998607665777-667787888888189998798579999882124516998
Q ss_pred ECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCC---CCC
Q ss_conf 58919999889997299999998346989986599999737999958772461899177766776588851869---999
Q 000497 1249 EGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF---HMN 1325 (1460)
Q Consensus 1249 ~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDGvdi~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~---~~~ 1325 (1460)
+|||+||||||||||||||+++|+|+|+|++|+|.|||+||+++++++||+++++|||||+||+||||+||..+ .++
T Consensus 1103 ~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~ 1182 (1321)
T 4f4c_A 1103 EPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSV 1182 (1321)
T ss_dssp CTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCC
T ss_conf 89899999899998199999999568638997899999986549999998545998789973272399997454999999
Q ss_pred CHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 917899999991099999968--994054158999894599999999987259987998565648799979999999998
Q 000497 1326 DDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISS 1403 (1460)
Q Consensus 1326 sd~ei~~aL~~~~l~~~i~~l--gLdt~i~e~G~~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~ 1403 (1460)
+|+|+|+|+++++++++|+++ ||||.|+|+|.|||||||||+|||||++|+|+|||||||||+||++||+.||++|++
T Consensus 1183 sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~ 1262 (1321)
T 4f4c_A 1183 TMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDR 1262 (1321)
T ss_dssp CHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999998298499971767899982388915699999999999999717998999681115789999999999999
Q ss_pred HCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHH
Q ss_conf 3599479985368146751097999939869997693578502994899999850
Q 000497 1404 ECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1404 ~f~~~TvI~IaHrl~ti~~~DrIlVl~~G~ivE~g~p~eLl~~~~s~f~~l~~~~ 1458 (1460)
.+++||+|+||||++|+++||+|+|||+|||+|+|+|+||++++ |.|++||+.+
T Consensus 1263 ~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~~-g~y~~L~~~Q 1316 (1321)
T 4f4c_A 1263 AREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSEK-GAYYKLTQKQ 1316 (1321)
T ss_dssp TSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHCC-----------
T ss_pred HCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHCC-CHHHHHHHHH
T ss_conf 73999899960689999969999999898999988889998498-0999999999
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1284.55 Aligned_cols=1156 Identities=17% Similarity=0.206 Sum_probs=830.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C-------CC------------CHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4979999999999999998999999999998426-8-------87------------24699999999999999999999
Q 000497 279 GYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-G-------SG------------HLDGYVLAIALGLTSILKSFFDT 338 (1460)
Q Consensus 279 ~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~-~-------~~------------~~~g~~l~~~~~~~~~~~~~~~~ 338 (1460)
++.++...+..++..++....|+++..+++.+.. . .. ......++..++.+.++..++..
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (1284)
T 3g5u_A 47 RLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAY 126 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999998613444332222221111100244688999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999998249942247898559999999659999999999-999997999999999999988
Q 000497 339 QYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYLLYTQ 417 (1460)
Q Consensus 339 ~~~~~~~r~~~~~r~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nLms~D~~ri~~~~~~-~~~~w~~pl~i~i~~~lL~~~ 417 (1460)
...+...+.+.++-..+...+|+|.++++..-.++.++|+++|.++.|++.+.+.... +..+....+.++.++.++..
T Consensus 127 ~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~- 205 (1284)
T 3g5u_A 127 IQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFT- 205 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 9999999999999999999999999869989975688778999999889999999999999999999999999999999-
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 679-9999999999999999999999999999999999999999999996469999817179999999999999999999
Q 000497 418 VKF-AFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLS 496 (1460)
Q Consensus 418 lG~-a~l~g~~v~il~~~~~~~~~~~~~~~q~~~~~~~d~Rv~~~~e~L~~ik~IK~~~we~~~~~~i~~~R~~El~~~~ 496 (1460)
+.| .+++.++++.++..+..++.+.+.+..++..+..++..+...|.++||++||.|++|+.+.++..+.-++-.+...
T Consensus 206 ~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~~~~ 285 (1284)
T 3g5u_A 206 RGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRLGI 285 (1284)
T ss_dssp TTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98999999999999999999999999999999999999999999999997879999846539999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999997--9999999999988099877758999999999999999999999999999999999999961
Q 000497 497 TRKYLDAWCVFFWATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFL 574 (1460)
Q Consensus 497 ~~~~l~~~~~~~~~~~p--~~~~~~tf~~y~~~~~~L~~~~~Ft~lsl~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL 574 (1460)
+.....+....+..... ..+..++++.+.+..+.++++.+++.+..+.....|+..+...+..+.++.++.+|+.+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l 365 (1284)
T 3g5u_A 286 KKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKII 365 (1284)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999929988999999999999999999999999999999999999999997
Q ss_pred CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHH
Q ss_conf 99988624431029998545788667899854999711686057886333653010015741996999996899847899
Q 000497 575 GCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSL 654 (1460)
Q Consensus 575 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~L~~i~l~i~~G~l~~IvG~vGsGKSTL 654 (1460)
+.++..+........+ ......++++|++|+|+.+.+.+. |+|+||++++|+.++|+||+|||||||
T Consensus 366 ~~~~~~~~~~~~~~~~----------~~~~g~i~~~~v~~~y~~~~~~~v---L~~isl~i~~G~~~~ivG~sGsGKSTl 432 (1284)
T 3g5u_A 366 DNKPSIDSFSKSGHKP----------DNIQGNLEFKNIHFSYPSRKEVQI---LKGLNLKVKSGQTVALVGNSGCGKSTT 432 (1284)
T ss_dssp SCCCCCSSCCSSCCCC----------TTCCCCEEEEEEEECCSSTTSCCS---EEEEEEEECTTCEEEEECCSSSSHHHH
T ss_pred CCCCCCCCCCCCCCCC----------CCCCCEEEEEEEEEECCCCCCCCC---EECCEEEECCCCEEEEECCCCCCHHHH
T ss_conf 2898677666567777----------777771899998997699998710---125458975998899989999979999
Q ss_pred HHHHHCCCCCCCEEEEEEC-------------CEEEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHCCHHHHHHC
Q ss_conf 9998638568870899709-------------1999848987877568899705999-9968899999981315888603
Q 000497 655 LNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLM 720 (1460)
Q Consensus 655 L~allGe~~~~~G~v~~~g-------------~iayv~Q~pwL~n~TIreNIlfg~~-~d~~~y~~vi~ac~L~~Dl~~l 720 (1460)
+++|+|++++.+|+|.++| .|+||+|+||++++||||||.+|.+ .+++++.++++.|++.++++.+
T Consensus 433 ~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l 512 (1284)
T 3g5u_A 433 VQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKL 512 (1284)
T ss_dssp HHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHS
T ss_pred HHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHC
T ss_conf 99980788999738999999877579999986548986887537766999974579899999999999982969999746
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHC
Q ss_conf 59985302579775660899999999988049998997077654059999999999631946689659998378211200
Q 000497 721 VGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA 800 (1460)
Q Consensus 721 p~GD~T~iGe~G~~LSGGQKqRIaLARAlY~~~~i~lLDD~~SaLD~~t~~~I~~~~i~g~ll~~kTvIlvTH~~~~l~~ 800 (1460)
|+|++|.+||+|.+|||||||||+||||+|++|+|++||||+|+||+++++.+.+. +.. +.+++|+|++||+++.+..
T Consensus 513 ~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~-l~~-~~~~~t~i~itH~l~~i~~ 590 (1284)
T 3g5u_A 513 PHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAA-LDK-AREGRTTIVIAHRLSTVRN 590 (1284)
T ss_dssp TTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHH-HHH-HHTTSEEEEECSCHHHHTT
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH-HHH-HCCCCEEEEEECCHHHHHC
T ss_conf 56334501478786599999999999999529998999798777799999999999-999-7399989999407789974
Q ss_pred CCEEEEEECCEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHH--HH----HHCC---CCCC-HHHHHHHH---CCCC-CC
Q ss_conf 898999939869995197788730036765554321011232--22----2001---2440-23444210---0134-67
Q 000497 801 ADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQ--KQ----EMRT---NASS-ANKQILLQ---EKDV-VS 866 (1460)
Q Consensus 801 aD~Iivl~~G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~--~~----~~~~---~~~~-~~~~~~~~---~~~~-~~ 866 (1460)
||+|++|++|+++++|+++++....+.+.+............ .. .... .... ........ .... ..
T Consensus 591 ~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (1284)
T 3g5u_A 591 ADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSICG 670 (1284)
T ss_dssp CSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC--------------------------------------------
T ss_pred CCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99899998999999788999986787799999974300221113333332222234433333333200034543334456
Q ss_pred CCCCHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----CCCHH
Q ss_conf 7741466779988850--65216879998641458999999999999999983245565531034578888----76413
Q 000497 867 VSDDAQEIIEVEQRKE--GRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQT----KYSTS 940 (1460)
Q Consensus 867 ~~~~~~~~~~~e~~~~--g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~----~~~~~ 940 (1460)
..+.......++..+. ....+..+..|.+.. |...++.+++.++..+......+++..|.+....... .....
T Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 749 (1284)
T 3g5u_A 671 PHDQDRKLSTKEALDEDVPPASFWRILKLNSTE-WPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSN 749 (1284)
T ss_dssp -------------CCCCCSCCCTTHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHH
T ss_pred CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 422332110245553136625899999984515-7999999999999999999999999999999855685033677999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 6899999999999999999999999999999999999999988428632324--56712699999601433101027999
Q 000497 941 FYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFD--QTPGGRILNRFSSDLYMIDDSLPFIL 1018 (1460)
Q Consensus 941 ~~l~v~~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~il~~p~~ff~--~~~~G~ilnRfs~D~~~id~~l~~~~ 1018 (1460)
.|..+|++++++..++.+.+.+.+.+.+.+...++|.+++++++++|++||+ .+++|+++||+++|++.++..++..+
T Consensus 750 ~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l 829 (1284)
T 3g5u_A 750 LFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRL 829 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998399888757899889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHC
Q ss_conf 9999999867786636877878---9999999999999999999999999999999862051476798732474999762
Q 000497 1019 NILLANFVGLLGIAVVLSYVQV---FFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAF 1095 (1460)
Q Consensus 1019 ~~~~~~~~~~i~~~~~i~~~~~---~~~i~~ipl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf 1095 (1460)
..++..++.+++.++++.+..| ++++..+|+.+++.+++..+.+...... ....+....++.|+++|+.+||+|
T Consensus 830 ~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~e~l~gi~ti~a~ 906 (1284)
T 3g5u_A 830 AVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKD---KKELEGSGKIATEAIENFRTVVSL 906 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHTTCTTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999699999999999999999999999999999999---999999999999999889999984
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 93899999999999999999999999999999999999999999999999984069787776129999999999999999
Q 000497 1096 KSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVS 1175 (1460)
Q Consensus 1096 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~ 1175 (1460)
++++.+.+++.+..+...+..... ..|.+....+...+.....+....++... ...+..+.+.+...+.+......
T Consensus 907 ~~e~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~l-v~~~~~~~~~~~~~~~~~~~~~~ 982 (1284)
T 3g5u_A 907 TREQKFETMYAQSLQIPYRNAMKK---AHVFGITFSFTQAMMYFSYAAAFRFGAYL-VTQQLMTFENVLLVFSAIVFGAM 982 (1284)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CSSSCSCSTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 659999999999999999999999---99999999999999999999999999999-99098069999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCCEEEEEEEECCCEE
Q ss_conf 9999999999999998999999973038610002578999999987409999999996699-885311247997589199
Q 000497 1176 LLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQV 1254 (1460)
Q Consensus 1176 ~l~~li~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~isl~I~~Gekv 1254 (1460)
.+..+...+.++.....+.+|+.++.+.+++.........+.++.+|.|+|+||+++|+.. ..++|+|+||+|++||++
T Consensus 983 ~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v 1062 (1284)
T 3g5u_A 983 AVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTL 1062 (1284)
T ss_dssp HHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEE
T ss_conf 99999999999999999999999998388766665556654567778579999899779999870020305997699889
Q ss_pred EEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC---CCCHHHHH
Q ss_conf 998899972999999983469899865999997379999587724618991777667765888518699---99917899
Q 000497 1255 GIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDDLKIW 1331 (1460)
Q Consensus 1255 gIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDGvdi~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~---~~sd~ei~ 1331 (1460)
|||||||||||||+++|+|+++|++|+|.+||+|++.++++.+|+++++|||||.+|++|||+|+.++. ..++++++
T Consensus 1063 ~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~ 1142 (1284)
T 3g5u_A 1063 ALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIV 1142 (1284)
T ss_dssp EEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHH
T ss_pred EEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHH
T ss_conf 99889999789999999468678997798999980007899997026898778740666699997466877899999999
Q ss_pred HHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCE
Q ss_conf 999991099999968--994054158999894599999999987259987998565648799979999999998359947
Q 000497 1332 SVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMT 1409 (1460)
Q Consensus 1332 ~aL~~~~l~~~i~~l--gLdt~i~e~G~~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~T 1409 (1460)
+++++++++++++.+ |+|+.++|+|.+||||||||+|||||++++|+||+||||||++|.++++.|++.|++..+++|
T Consensus 1143 ~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~t 1222 (1284)
T 3g5u_A 1143 RAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRT 1222 (1284)
T ss_dssp HHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSC
T ss_pred HHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 99998395999972704245611788893389999999999999749999998687555799999999999998679998
Q ss_pred EEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHHC
Q ss_conf 99853681467510979999398699976935785029948999998507
Q 000497 1410 VITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1459 (1460)
Q Consensus 1410 vI~IaHrl~ti~~~DrIlVl~~G~ivE~g~p~eLl~~~~s~f~~l~~~~g 1459 (1460)
+|+||||++++.+||||+||++|+++|.|+|++|++++ |.|++|++.+.
T Consensus 1223 vi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~~-g~y~~l~~~q~ 1271 (1284)
T 3g5u_A 1223 CIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQK-GIYFSMVSVQA 1271 (1284)
T ss_dssp EEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHSC-SHHHHHHHHHC
T ss_pred EEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCC-CHHHHHHHHHH
T ss_conf 99995587999809989999899899977899998477-77999999976
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=753.24 Aligned_cols=513 Identities=19% Similarity=0.244 Sum_probs=432.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 68999999999999999999999999999999999999999884286323245671269999960143310102799999
Q 000497 941 FYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNI 1020 (1460)
Q Consensus 941 ~~l~v~~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~~~~ 1020 (1460)
.+...+++++++..++.++..+++.+.+.+...+++.++++++++.|++|||++++|+++||+++|++.+.+.+...+..
T Consensus 137 ~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~ 216 (1321)
T 4f4c_A 137 NVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGM 216 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999997889899879984899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHHH
Q ss_conf 99999867786636877878999999999999999999999999999999986205147679873247499976293899
Q 000497 1021 LLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDY 1100 (1460)
Q Consensus 1021 ~~~~~~~~i~~~~~i~~~~~~~~i~~ipl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~~~~ 1100 (1460)
++..++.+++.++++.+..|.+.++++....++..+..++.+..+...+......+...+++.|+++|+.+||+|++|+.
T Consensus 217 ~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 296 (1321)
T 4f4c_A 217 AFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRY 296 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999983999998214299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999998406978777612999999999999999999999
Q 000497 1101 FMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNF 1180 (1460)
Q Consensus 1101 ~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l 1180 (1460)
+.+++.+..+...+..........+......++..+...++....... ...+..++|.+..++.+...+..++..+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----v~~g~lt~g~~~~~~~~~~~~~~~l~~~ 372 (1321)
T 4f4c_A 297 ELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGW----VHDGSLNFGDMLTTFSSVMMGSMALGLA 372 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HTTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999999999999----9959986999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECC-CCCCCCEEEEEEEECCCEEEEECC
Q ss_conf 9999999999899999997303861000257899999998740999999999669-988531124799758919999889
Q 000497 1181 LSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKP-SLPAALHDINFTIEGGTQVGIVGR 1259 (1460)
Q Consensus 1181 i~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~-~~~~vL~~isl~I~~GekvgIvGr 1259 (1460)
...+..+.....+.+|+.++.+.+++..........+.+.+|.|+|+||+|+|+. ...++|+|+||+|+|||++||||+
T Consensus 373 ~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~ 452 (1321)
T 4f4c_A 373 GPQLAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGS 452 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEEC
T ss_conf 99999999999999999999717853456665565677888767999855407999987433331886228827899805
Q ss_pred CCCHHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCCC-CCHHHHHHHHHHHC
Q ss_conf 99729999999834698998659999973799995877246189917776677658885186999-99178999999910
Q 000497 1260 TGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCH 1338 (1460)
Q Consensus 1260 TGSGKSTLl~~L~rl~~~~~G~I~IDGvdi~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~ 1338 (1460)
||||||||+++|+|+|+|++|+|.+||+|+++++++++|+++++|||||++|+|||||||..+.+ .+|+++++|++.++
T Consensus 453 sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~ 532 (1321)
T 4f4c_A 453 SGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMAN 532 (1321)
T ss_dssp SSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 89857788887545651644861579965011259998504666587533207861678864155220999999998756
Q ss_pred HHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 99999968--9940541589998945999999999872599879985656487999799999999983599479985368
Q 000497 1339 VKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHR 1416 (1460)
Q Consensus 1339 l~~~i~~l--gLdt~i~e~G~~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~IaHr 1416 (1460)
++++++.+ |+||.|+|+|.+||||||||++||||++++|+|+|||||||+||++||+.+++.|++..+++|+|+||||
T Consensus 533 l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHr 612 (1321)
T 4f4c_A 533 AEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHR 612 (1321)
T ss_dssp CHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSC
T ss_pred CHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 54688708888860755898877777879999999872599989984554468878999999999998479889997363
Q ss_pred HHHHHHCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHH
Q ss_conf 146751097999939869997693578502994899999850
Q 000497 1417 ISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1417 l~ti~~~DrIlVl~~G~ivE~g~p~eLl~~~~s~f~~l~~~~ 1458 (1460)
++++.+||+|+||++|+|+|.|+|+||+++ ++.|++|++.+
T Consensus 613 ls~i~~aD~Iivl~~G~ive~Gth~eL~~~-~g~y~~l~~~q 653 (1321)
T 4f4c_A 613 LSTIRNADLIISCKNGQVVEVGDHRALMAQ-QGLYYDLVTAQ 653 (1321)
T ss_dssp TTTTTTCSEEEEEETTEEEEEECHHHHHTT-TCHHHHHHHHH
T ss_pred HHHHHHCCEEEEEECCEEECCCCHHHHHHH-HHHHHHHHHHH
T ss_conf 878986898999639965136899999985-32799999962
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=717.66 Aligned_cols=511 Identities=21% Similarity=0.257 Sum_probs=428.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 36899999999999999999999999999999999999999988428632324567126999996014331010279999
Q 000497 940 SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILN 1019 (1460)
Q Consensus 940 ~~~l~v~~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~~~ 1019 (1460)
..|.++|++++++..++.+++.+++.+.+.+...++|.+++++++++|++||+++++|+++||+++|++.+++.++..+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~ 187 (1284)
T 3g5u_A 108 TTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIG 187 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999869989975688778999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHH
Q ss_conf 99999986778663687787899999999999999999999999999999998620514767987324749997629389
Q 000497 1020 ILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSED 1099 (1460)
Q Consensus 1020 ~~~~~~~~~i~~~~~i~~~~~~~~i~~ipl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~~~ 1099 (1460)
.++..++.+++.++++.+..|.+.++++.+..++..+..++.+..+...+....+.+++.+++.|+++|+.+||+|++|+
T Consensus 188 ~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~ 267 (1284)
T 3g5u_A 188 MFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQK 267 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999997879999846539
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999999---99999999840697877761299999999999999999
Q 000497 1100 YFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII---SFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSL 1176 (1460)
Q Consensus 1100 ~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~---~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~ 1176 (1460)
.+.+++.+..+...+..........+......++..... ...+...+.. +..+.|.+..++.+......+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~-------g~~~~g~~~~~~~~~~~~~~~ 340 (1284)
T 3g5u_A 268 KELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVIS-------KEYSIGQVLTVFFSVLIGAFS 340 (1284)
T ss_dssp SHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------SSSCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999999999992-------998899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCCEEEEEEEECCCEEE
Q ss_conf 999999999999998999999973038610002578999999987409999999996699-8853112479975891999
Q 000497 1177 LGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVG 1255 (1460)
Q Consensus 1177 l~~li~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~isl~I~~Gekvg 1255 (1460)
+..+...+..+.....+++|+.++.+.+++............+.+|.|+|+||+|+|+.+ ..++|+|+||+|+|||++|
T Consensus 341 ~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ 420 (1284)
T 3g5u_A 341 VGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVA 420 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEE
T ss_conf 99999999999999999999999972898677666567777777771899998997699998710125458975998899
Q ss_pred EECCCCCHHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC-CCCHHHHHHHH
Q ss_conf 98899972999999983469899865999997379999587724618991777667765888518699-99917899999
Q 000497 1256 IVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVL 1334 (1460)
Q Consensus 1256 IvGrTGSGKSTLl~~L~rl~~~~~G~I~IDGvdi~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL 1334 (1460)
||||||||||||+++|.|+++|++|+|.+||+|++.++++++|+++++|||||.+|++|||||+.++. ..+++++++++
T Consensus 421 ivG~sGsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~ 500 (1284)
T 3g5u_A 421 LVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAV 500 (1284)
T ss_dssp EECCSSSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH
T ss_conf 98999997999999980788999738999999877579999986548986887537766999974579899999999999
Q ss_pred HHHCHHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 991099999968--994054158999894599999999987259987998565648799979999999998359947998
Q 000497 1335 EKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVIT 1412 (1460)
Q Consensus 1335 ~~~~l~~~i~~l--gLdt~i~e~G~~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~ 1412 (1460)
+.++++++++.+ |+|+.++|+|.+||||||||+|||||++++|+|||||||||+||++|++.+++.+++..+++|+|+
T Consensus 501 ~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~ 580 (1284)
T 3g5u_A 501 KEANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIV 580 (1284)
T ss_dssp HHTTCHHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 98296999974656334501478786599999999999999529998999798777799999999999999739998999
Q ss_pred ECCCHHHHHHCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHH
Q ss_conf 5368146751097999939869997693578502994899999850
Q 000497 1413 IAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1413 IaHrl~ti~~~DrIlVl~~G~ivE~g~p~eLl~~~~s~f~~l~~~~ 1458 (1460)
||||++++.+||+|+||++|+++|.|+|++|++++ +.|++++...
T Consensus 581 itH~l~~i~~~d~i~vl~~G~i~~~g~~~~l~~~~-~~~~~~~~~~ 625 (1284)
T 3g5u_A 581 IAHRLSTVRNADVIAGFDGGVIVEQGNHDELMREK-GIYFKLVMTQ 625 (1284)
T ss_dssp ECSCHHHHTTCSEEEECSSSCCCCEECHHHHHHTT-SHHHHHHHHT
T ss_pred EECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCC-CHHHHHHHHH
T ss_conf 94077899749989999899999978899998678-7799999974
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=685.66 Aligned_cols=560 Identities=25% Similarity=0.354 Sum_probs=465.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99986414589999999999999999832455655310345788887641368999999999999999999999999999
Q 000497 890 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSL 969 (1460)
Q Consensus 890 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~v~~~l~~~~~~~~~~~~~~~~~~~~ 969 (1460)
...|++...+.. ++.+++.++..+.....+++++.+++.............++.+++++.++..++.+...+.....+.
T Consensus 28 l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (598)
T 3qf4_B 28 LLGYLRPHTFTL-IMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQ 106 (598)
T ss_dssp HGGGTGGGHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999-9999999999999999999999999999736888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999988428632324567126999996014331010279999999999867786636877878999999999
Q 000497 970 RAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPF 1049 (1460)
Q Consensus 970 ~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~ipl 1049 (1460)
+...++|..+++++++.|+.||+++++|+++||+++|++.+++.+...+..++..++.+++.++++.+..|+++++.+..
T Consensus 107 ~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~ 186 (598)
T 3qf4_B 107 DVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSI 186 (598)
T ss_dssp HHHHHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999779999976888899999999999999999999999999999999999999999989999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998620514767987324749997629389999999999999999999999999999999
Q 000497 1050 WFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLR 1129 (1460)
Q Consensus 1050 ~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~ 1129 (1460)
..++..+..++.+..++..+...+..+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+..........+....
T Consensus 187 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (598)
T 3qf4_B 187 VPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPL 266 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999973799999748709999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999999999999840697877761299999999999999999999999999999998999999973038610002
Q 000497 1130 LQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC 1209 (1460)
Q Consensus 1130 l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sveRi~~~~~~~~E~~~ 1209 (1460)
.+++..+...++........ ..+..+.|.+...+.++..+..++..+...+.+++....+++|+.++.+.++|...
T Consensus 267 ~~~~~~~~~~~~~~~g~~l~----~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 342 (598)
T 3qf4_B 267 MNMVNNLGFALISGFGGWLA----LKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDD 342 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHG----GGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999----85997899999999999999999999999999999999999999999768877777
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEC
Q ss_conf 57899999998740999999999669988531124799758919999889997299999998346989986599999737
Q 000497 1210 GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNI 1289 (1460)
Q Consensus 1210 ~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDGvdi 1289 (1460)
....+.++..|.|+++||+++|+++ .++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.+||.|+
T Consensus 343 --~~~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~i 419 (598)
T 3qf4_B 343 --PDAVELREVRGEIEFKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDI 419 (598)
T ss_dssp --SSCCCCCSCCCCEEEEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEEG
T ss_pred --CCCCCCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEH
T ss_conf --7777777777718999989977999-8601222799869988999899999699999999458579980899999983
Q ss_pred CCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHHHHH
Q ss_conf 9999587724618991777667765888518699-99917899999991099999968--99405415899989459999
Q 000497 1290 INTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQL 1366 (1460)
Q Consensus 1290 ~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~i~e~G~~LS~GQrQl 1366 (1460)
.+++.+.+|++++++||||.+|++|+|||+..+. ..++++++++++.+++.+.++.+ |+|+.++|+|.+||||||||
T Consensus 420 ~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Qr 499 (598)
T 3qf4_B 420 RKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQL 499 (598)
T ss_dssp GGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHHH
T ss_pred HHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHH
T ss_conf 01889999841089907982324639999744799999999999999969788897464532364227889879999999
Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHCC
Q ss_conf 99999872599879985656487999799999999983599479985368146751097999939869997693578502
Q 000497 1367 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1446 (1460)
Q Consensus 1367 l~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~IaHrl~ti~~~DrIlVl~~G~ivE~g~p~eLl~~ 1446 (1460)
++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|+|+||+++
T Consensus 500 v~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 579 (598)
T 3qf4_B 500 LAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQK 579 (598)
T ss_dssp HHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHHHT
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC
T ss_conf 99999996499999998976679999999999999998089989999427789971998999989999987789999867
Q ss_pred CCCHHHHHHHHH
Q ss_conf 994899999850
Q 000497 1447 ECSVFSSFVRAS 1458 (1460)
Q Consensus 1447 ~~s~f~~l~~~~ 1458 (1460)
++.|+++++..
T Consensus 580 -~~~~~~~~~~~ 590 (598)
T 3qf4_B 580 -RGFYYELFTSQ 590 (598)
T ss_dssp -TCHHHHHHHHH
T ss_pred -CCHHHHHHHHH
T ss_conf -87799999997
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=683.30 Aligned_cols=568 Identities=21% Similarity=0.281 Sum_probs=446.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 65216879998641458999999999999999983245565531034578888764136899999999999999999999
Q 000497 883 GRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAF 962 (1460)
Q Consensus 883 g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~v~~~l~~~~~~~~~~~~~ 962 (1460)
|...++.+..|++...+.... .+++.++..++....+++++++++.............+...++++.++..++.++..+
T Consensus 7 g~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (587)
T 3qf4_A 7 GGGGSKTLARYLKPYWIFAVL-APLFMVVEVICDLSQPTLLARIVDEGIARGDFSLVLKTGILMLIVALIGAVGGIGCTV 85 (587)
T ss_dssp -CCCCCCGGGGTGGGHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 853499999999999999999-9999999999999999999999999873698799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998842863232456712699999601433101027999999999986778663687787899
Q 000497 963 SFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFF 1042 (1460)
Q Consensus 963 ~~~~~~~~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~~~~~~~~~~~~i~~~~~i~~~~~~~ 1042 (1460)
...+.+.+...++|..+++++++.|+.||+++++|+++||+++|++.+++.+...+..++...+.+++.++++.+..|.+
T Consensus 86 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 165 (587)
T 3qf4_A 86 FASYASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKL 165 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999978897997658889999999999999999999999999999999999999999998999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999862051476798732474999762938999999999999999999999999
Q 000497 1043 LLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTA 1122 (1460)
Q Consensus 1043 ~i~~ipl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~ 1122 (1460)
.++++....++..+..++.+..+...+...+..+.+.+.+.|+++|+.+||+|++|+.+.+++.+..+...+........
T Consensus 166 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 245 (587)
T 3qf4_A 166 SSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSL 245 (587)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998559999986214999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999-998406978777612999999999999999999999999999999989999999730
Q 000497 1123 SLWLSLRLQLLAAFIISFIATM-AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM 1201 (1460)
Q Consensus 1123 ~~wl~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sveRi~~~~ 1201 (1460)
..+......++..+...++... ..... .+..+.|.+..++.+...+..++..+...+..+.....+.+|+.++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~vl~~g~~~v~-----~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l 320 (587)
T 3qf4_A 246 IVFALPLFIFIVNMGMIAVLWFGGVLVR-----NNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVL 320 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999998-----49938999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE
Q ss_conf 38610002578999999987409999999996699885311247997589199998899972999999983469899865
Q 000497 1202 DVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQ 1281 (1460)
Q Consensus 1202 ~~~~E~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~ 1281 (1460)
+.+++..... .+.+.++..|.|+++||+++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+
T Consensus 321 ~~~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~ 399 (587)
T 3qf4_A 321 NEKPAIEEAD-NALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGR 399 (587)
T ss_dssp HCCCSCCCCT-TCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEE
T ss_pred CCCCCCCCCC-CCCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
T ss_conf 6897657887-765668888807997889984899976421117998699889998999997999999992786699867
Q ss_pred EEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCC
Q ss_conf 999997379999587724618991777667765888518699-99917899999991099999968--994054158999
Q 000497 1282 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGIS 1358 (1460)
Q Consensus 1282 I~IDGvdi~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~i~e~G~~ 1358 (1460)
|.+||+|+++++.+++|++++++||||.+|++|+|||+..+. ..++++++++++.+++.++++.+ |+|+.+++.|.+
T Consensus 400 i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~ 479 (587)
T 3qf4_A 400 VEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRN 479 (587)
T ss_dssp EEESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCS
T ss_pred EEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCC
T ss_conf 98999983407899998413897789867675599998524889999999999999684999975653121275189899
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEEC
Q ss_conf 89459999999998725998799856564879997999999999835994799853681467510979999398699976
Q 000497 1359 FSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQG 1438 (1460)
Q Consensus 1359 LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~IaHrl~ti~~~DrIlVl~~G~ivE~g 1438 (1460)
||||||||++||||++++|+|++||||||++|+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|
T Consensus 480 LSgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g 559 (587)
T 3qf4_A 480 FSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFG 559 (587)
T ss_dssp SCHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEEC
T ss_conf 29999999999999972999999979754479999999999999867999899982276889819989999899899978
Q ss_pred CHHHHHCCCCCHHHHHHHHH
Q ss_conf 93578502994899999850
Q 000497 1439 NPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1439 ~p~eLl~~~~s~f~~l~~~~ 1458 (1460)
+|+||++++ +.|+++++..
T Consensus 560 ~~~el~~~~-~~~~~~~~~~ 578 (587)
T 3qf4_A 560 THKELLEHC-KPYREIYESQ 578 (587)
T ss_dssp CHHHHHHHC-HHHHHHHHHH
T ss_pred CHHHHHHCC-CHHHHHHHHH
T ss_conf 899998678-3999999998
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=664.30 Aligned_cols=561 Identities=22% Similarity=0.344 Sum_probs=438.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCH-----HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99986414589999999999999999832455655310345788887--641-----36899999999999999999999
Q 000497 890 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTK--YST-----SFYLVVLCIFCMFNSFLTLVRAF 962 (1460)
Q Consensus 890 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~--~~~-----~~~l~v~~~l~~~~~~~~~~~~~ 962 (1460)
+..|++...+.....+ ++.++........++.+++.++........ ... ..+...+.++.++..++.+...+
T Consensus 5 l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (578)
T 4a82_A 5 YLQFVKPYKYRIFATI-IVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQY 83 (578)
T ss_dssp HHHHHGGGHHHHHHHH-HHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999889999999999-999999999999999999999999816871146778888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998842863232456712699999601433101027999999999986778663687787899
Q 000497 963 SFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFF 1042 (1460)
Q Consensus 963 ~~~~~~~~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~~~~~~~~~~~~i~~~~~i~~~~~~~ 1042 (1460)
...+.+.+...+++.++++++++.|+.||+++++|+++||+++|++.+++.+...+..++...+..++.++++.+..|++
T Consensus 84 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 163 (578)
T 4a82_A 84 LAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKL 163 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999987899997689869999999999999999999999999999999999999999996999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999862051476798732474999762938999999999999999999999999
Q 000497 1043 LLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTA 1122 (1460)
Q Consensus 1043 ~i~~ipl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~ 1122 (1460)
.++.+....++..+..++.+..+...+......+++.+++.|+++|+.+||+|++|+.+.+++.+..+...+........
T Consensus 164 ~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (578)
T 4a82_A 164 TLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRW 243 (578)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998249999981664999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999---99999999984069787776129999999999999999999999999999999899999997
Q 000497 1123 SLWLSLRLQLLAAFI---ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLE 1199 (1460)
Q Consensus 1123 ~~wl~~~l~~l~~~~---~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sveRi~~ 1199 (1460)
..+.......+..+. +...+...+. .+..+.|.+..++.+...+..++..+...+.++.....+.+|+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~v~~~g~~~v~-------~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~ 316 (578)
T 4a82_A 244 NAYSFAAINTVTDIGPIIVIGVGAYLAI-------SGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQ 316 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999998-------599589999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 30386100025789999999874099999999966998853112479975891999988999729999999834698998
Q 000497 1200 YMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG 1279 (1460)
Q Consensus 1200 ~~~~~~E~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~ 1279 (1460)
+.+.++|..... .+.+.++..|.|+++||+++|+++.+++|+|+||++++||++||+||||||||||+++|.|+++|++
T Consensus 317 ~l~~~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~ 395 (578)
T 4a82_A 317 LIDEDYDIKNGV-GAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395 (578)
T ss_dssp HHTCCCSSCCCT-TCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSE
T ss_pred HHCCCCCCCCCC-CCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
T ss_conf 976897666787-7666677788079999999758999741343379987999999989999859999999846788999
Q ss_pred CEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCC
Q ss_conf 65999997379999587724618991777667765888518699-99917899999991099999968--9940541589
Q 000497 1280 GQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESG 1356 (1460)
Q Consensus 1280 G~I~IDGvdi~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~i~e~G 1356 (1460)
|+|.+||.|++.++.+++|++++++||+|.+|++|+|||+..+. ..++++++++++.+++.++++.+ |+|+.++|+|
T Consensus 396 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g 475 (578)
T 4a82_A 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERG 475 (578)
T ss_dssp EEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGG
T ss_pred CEEEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCC
T ss_conf 67999999844278999960068992898347645999985279998899999999880959999757330102530688
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEE
Q ss_conf 99894599999999987259987998565648799979999999998359947998536814675109799993986999
Q 000497 1357 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVE 1436 (1460)
Q Consensus 1357 ~~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~IaHrl~ti~~~DrIlVl~~G~ivE 1436 (1460)
.+||||||||++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|
T Consensus 476 ~~LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~ 555 (578)
T 4a82_A 476 VKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555 (578)
T ss_dssp TTSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEE
T ss_conf 96799999999999999749999999786545799999999999999808997999831789997199899998998999
Q ss_pred ECCHHHHHCCCCCHHHHHHHHHCC
Q ss_conf 769357850299489999985079
Q 000497 1437 QGNPQTLLQDECSVFSSFVRASTM 1460 (1460)
Q Consensus 1437 ~g~p~eLl~~~~s~f~~l~~~~g~ 1460 (1460)
.|+|+||++++ +.|+++++.+.+
T Consensus 556 ~g~~~el~~~~-~~~~~~~~~q~~ 578 (578)
T 4a82_A 556 TGTHRELIAKQ-GAYEHLYSIQNL 578 (578)
T ss_dssp EECHHHHHHTT-SHHHHHHTTTTC
T ss_pred ECCHHHHHHCC-CHHHHHHHHHCC
T ss_conf 88899998588-389999985069
No 8
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=663.45 Aligned_cols=560 Identities=23% Similarity=0.312 Sum_probs=461.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7999864145899999999999999998324556553103457888876413689-999999999999999999999999
Q 000497 889 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYL-VVLCIFCMFNSFLTLVRAFSFAFG 967 (1460)
Q Consensus 889 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l-~v~~~l~~~~~~~~~~~~~~~~~~ 967 (1460)
.+..|++...+.... .+++.++........+++++++++..... .......++ ..++++.++..++.+...+.....
T Consensus 15 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (582)
T 3b60_A 15 RLWPTIAPFKAGLIV-AGIALILNAASDTFMLSLLKPLLDDGFGK-TDRSVLLWMPLVVIGLMILRGITSYISSYCISWV 92 (582)
T ss_dssp HHHHHHGGGHHHHHH-HHHHHHHHHHHHHHHHHHHTHHHHSSTTS-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999-99999999999999999999999988436-8657999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999884286323245671269999960143310102799999999998677866368778789999999
Q 000497 968 SLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLV 1047 (1460)
Q Consensus 968 ~~~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~i 1047 (1460)
+.+...+++.++++++++.|+.||+++++|+++||+++|++.++..+...+..++..++.+++.++++.+..|+++++++
T Consensus 93 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l 172 (582)
T 3b60_A 93 SGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILV 172 (582)
T ss_dssp HHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998099999788986589999998799999999999999999999999999999998099999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999986205147679873247499976293899999999999999999999999999999
Q 000497 1048 PFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLS 1127 (1460)
Q Consensus 1048 pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~ 1127 (1460)
....++..+..++.+..++..+......+++.+++.|+++|+.+||+|++|+.+.+++.+..+...+........+.|..
T Consensus 173 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3b60_A 173 VLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISD 252 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999961999998376899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999999999999999998406978777612999999999999999999999999999999989999999730386100
Q 000497 1128 LRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1207 (1460)
Q Consensus 1128 ~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sveRi~~~~~~~~E~ 1207 (1460)
...+++..+...++.+. +.. ....+.++.|.+...+.++..+..++..+...+.++.....+++|+.++.+.++|.
T Consensus 253 ~~~~~~~~~~~~~~~~~---g~~-~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~ 328 (582)
T 3b60_A 253 PIIQLIASLALAFVLYA---ASF-PSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEK 328 (582)
T ss_dssp HHHHHHHHHHHHHHHHH---HHS-SSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSC
T ss_pred HHHHHHHHHHHHHHHHH---HHH-HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999---999-99849998999999999999999999999999999999999999999997599876
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 02578999999987409999999996699885311247997589199998899972999999983469899865999997
Q 000497 1208 LCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL 1287 (1460)
Q Consensus 1208 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDGv 1287 (1460)
.. .+.+.++..+.|+++||+++|+++.+++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.+||.
T Consensus 329 ~~---~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b60_A 329 DE---GKRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGH 405 (582)
T ss_dssp CC---CCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTE
T ss_pred CC---CCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCE
T ss_conf 67---777777888847999889973999974415615997699989998999998999999986106898976979999
Q ss_pred ECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHH
Q ss_conf 379999587724618991777667765888518699--99917899999991099999968--99405415899989459
Q 000497 1288 NIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1363 (1460)
Q Consensus 1288 di~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~--~~sd~ei~~aL~~~~l~~~i~~l--gLdt~i~e~G~~LS~GQ 1363 (1460)
|+++++.+++|++++++||+|.+|++|+|||+..+. ..++++++++++.+++.++++.+ |+|+.+++.|.+|||||
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq 485 (582)
T 3b60_A 406 DLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQ 485 (582)
T ss_dssp ETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHH
T ss_pred ECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf 82306999999608088068747787899998545999989999999999849799998450411451147988789999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999872599879985656487999799999999983599479985368146751097999939869997693578
Q 000497 1364 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTL 1443 (1460)
Q Consensus 1364 rQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~IaHrl~ti~~~DrIlVl~~G~ivE~g~p~eL 1443 (1460)
|||++||||++++|+|++||||||++|+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 486 ~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 565 (582)
T 3b60_A 486 RQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSEL 565 (582)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997289989997865557989999999999999679979999454778985998999978889884589999
Q ss_pred HCCCCCHHHHHHHHH
Q ss_conf 502994899999850
Q 000497 1444 LQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1444 l~~~~s~f~~l~~~~ 1458 (1460)
++++ +.|+++++.+
T Consensus 566 ~~~~-~~~~~~~~~q 579 (582)
T 3b60_A 566 LAQH-GVYAQLHKMQ 579 (582)
T ss_dssp HHHT-SSHHHHHHHT
T ss_pred HHCC-CHHHHHHHHH
T ss_conf 8769-8899999975
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=660.27 Aligned_cols=559 Identities=23% Similarity=0.337 Sum_probs=459.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9998641458999999999999999983245565531034578888764136899-999999999999999999999999
Q 000497 890 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLV-VLCIFCMFNSFLTLVRAFSFAFGS 968 (1460)
Q Consensus 890 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~-v~~~l~~~~~~~~~~~~~~~~~~~ 968 (1460)
+..|++...+.... .+++.++........+++++++++..... .......++. .++++.++..++.+...+.....+
T Consensus 16 l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (582)
T 3b5x_A 16 LWTYIRLYKAGLVV-STIALVINAAADTYMISLLKPLLDEGFGN-AESNFLRILPFMILGLMFVRGLSGFASSYCLSWVS 93 (582)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998899999999-99999999999999999999999998646-86679999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999998842863232456712699999601433101027999999999986778663687787899999999
Q 000497 969 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1048 (1460)
Q Consensus 969 ~~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~ip 1048 (1460)
.+...+++..+++++++.|+.||+++++|++++|+++|++.+++.+...+..++...+.+++.++++.+..|+++++.+.
T Consensus 94 ~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~ 173 (582)
T 3b5x_A 94 GNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIV 173 (582)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999986999997789878999999988999999999999999999999999999999982999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999862051476798732474999762938999999999999999999999999999999
Q 000497 1049 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1128 (1460)
Q Consensus 1049 l~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~ 1128 (1460)
...++..+..++.+..++..+...+..+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+........+.|...
T Consensus 174 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T 3b5x_A 174 VAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADP 253 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999519999970875999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999984069787776129999999999999999999999999999999899999997303861000
Q 000497 1129 RLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEEL 1208 (1460)
Q Consensus 1129 ~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sveRi~~~~~~~~E~~ 1208 (1460)
..+++..+...++.+...... ..+.++.|.+...+.++..+..++..+...+.++.....+.+|+.++.+.++|..
T Consensus 254 ~~~~~~~~~~~~i~~~g~~~v----~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~ 329 (582)
T 3b5x_A 254 VIQMIASLALFAVLFLASVDS----IRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERD 329 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 999999999999999999999----8599889999999999999999999999999999999999999999975897677
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEE
Q ss_conf 25789999999874099999999966998853112479975891999988999729999999834698998659999973
Q 000497 1209 CGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN 1288 (1460)
Q Consensus 1209 ~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDGvd 1288 (1460)
.. +.+.++..|.|+++||+++|+++.+++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.+||.|
T Consensus 330 ~~---~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~ 406 (582)
T 3b5x_A 330 NG---KYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHD 406 (582)
T ss_pred CC---CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
T ss_conf 77---777777888289999899728998654004169987999899989999979999999965778999879899998
Q ss_pred CCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHHH
Q ss_conf 79999587724618991777667765888518699--99917899999991099999968--994054158999894599
Q 000497 1289 IINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQR 1364 (1460)
Q Consensus 1289 i~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~--~~sd~ei~~aL~~~~l~~~i~~l--gLdt~i~e~G~~LS~GQr 1364 (1460)
+.+++.+.+|++++++||+|.+|++|++||+..+. ..++++++++++.+++.++++.+ |+|+.+++.|.+||||||
T Consensus 407 ~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq~ 486 (582)
T 3b5x_A 407 VRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQR 486 (582)
T ss_pred HHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHHH
T ss_conf 56388999964858982799053102999985668899999999999998798999984765334510688884799999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999998725998799856564879997999999999835994799853681467510979999398699976935785
Q 000497 1365 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLL 1444 (1460)
Q Consensus 1365 Qll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~IaHrl~ti~~~DrIlVl~~G~ivE~g~p~eLl 1444 (1460)
||++||||++++|+|++||||||++|+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+
T Consensus 487 qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 566 (582)
T 3b5x_A 487 QRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLL 566 (582)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHH
T ss_conf 99999999974999999978544689999999999999972899899993688999819989999899899977899998
Q ss_pred CCCCCHHHHHHHHH
Q ss_conf 02994899999850
Q 000497 1445 QDECSVFSSFVRAS 1458 (1460)
Q Consensus 1445 ~~~~s~f~~l~~~~ 1458 (1460)
+++ +.|+++++.+
T Consensus 567 ~~~-~~~~~~~~~q 579 (582)
T 3b5x_A 567 AQD-GAYAQLHRIQ 579 (582)
T ss_pred HCC-CHHHHHHHHH
T ss_conf 488-5899999986
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=651.69 Aligned_cols=562 Identities=23% Similarity=0.281 Sum_probs=445.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9998641458999999999999999983245565531034578888-76--41368999999999999999999999999
Q 000497 890 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQT-KY--STSFYLVVLCIFCMFNSFLTLVRAFSFAF 966 (1460)
Q Consensus 890 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~~--~~~~~l~v~~~l~~~~~~~~~~~~~~~~~ 966 (1460)
+..|++...+..... +++.++........+++++++++....... .. ....+...++++.++..++.+.+.+....
T Consensus 10 l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (595)
T 2yl4_A 10 LLGLAYPERRRLAAA-VGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQT 88 (595)
T ss_dssp HHHHHGGGHHHHHHH-HHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999988789999999-9999999999999999999999999735740266799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999988428632324567126999996014331010279999999999867786636877878999999
Q 000497 967 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1046 (1460)
Q Consensus 967 ~~~~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~ 1046 (1460)
.+.+...+++.++++++++.|+.||+++++|+++||+++|++.++..+...+..++..++.+++.++++.+..|++++++
T Consensus 89 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~ 168 (595)
T 2yl4_A 89 SGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFV 168 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999819999977798488999999999999999999999999999999999999999819999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998620514767987324749997629389999999999999999999999999999
Q 000497 1047 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1126 (1460)
Q Consensus 1047 ipl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1126 (1460)
+....++..+...+.+..+...+......+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+........+.|.
T Consensus 169 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (595)
T 2yl4_A 169 LSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGF 248 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999981199999837569999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999999999999-984069787776129999999999999999999999999999999899999997303861
Q 000497 1127 SLRLQLLAAFIISFIATMA-VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQ 1205 (1460)
Q Consensus 1127 ~~~l~~l~~~~~~~~~~~~-v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sveRi~~~~~~~~ 1205 (1460)
.....++..+...++.+.. .... .+.++.|.+...+.++..+..++..+...+.++.....+.+|+.++.+.++
T Consensus 249 ~~~~~~~~~~~~~~~~~~g~~~v~-----~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~ 323 (595)
T 2yl4_A 249 FGATGLSGNLIVLSVLYKGGLLMG-----SAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREP 323 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-----TTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 999999999999999999999998-----699789999999999999999999999999999999999999999983897
Q ss_pred CCCCCCCCCCCCCCCCCC-EEEEEEEEEECCC-CCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 000257899999998740-9999999996699-88531124799758919999889997299999998346989986599
Q 000497 1206 EELCGYQSLSPDWPFQGL-IEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1283 (1460)
Q Consensus 1206 E~~~~~~~~~~~wp~~g~-I~~~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ 1283 (1460)
|.......+ +..+..|. |+++||+++|+.+ ..++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.
T Consensus 324 ~~~~~~~~~-~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~ 402 (595)
T 2yl4_A 324 KLPFNEGVI-LNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTIS 402 (595)
T ss_dssp SSCSSCSBC-CCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEE
T ss_pred CCCCCCCCC-CCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 667777877-7767899838999889985899888120112799849988999899999799999998258578983799
Q ss_pred ECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCCC----CCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCC
Q ss_conf 99973799995877246189917776677658885186999----9917899999991099999968--99405415899
Q 000497 1284 VDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1357 (1460)
Q Consensus 1284 IDGvdi~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~~----~sd~ei~~aL~~~~l~~~i~~l--gLdt~i~e~G~ 1357 (1460)
+||.|+.+++.+.+|++++++||+|.+|++|++||+..+.. .++++++++++.+++.++++.+ |+|+.++++|.
T Consensus 403 ~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~ 482 (595)
T 2yl4_A 403 LDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGV 482 (595)
T ss_dssp ETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSC
T ss_pred ECCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 99998111799999732289836883268779999840587766568999999999869799997473201350168878
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEE
Q ss_conf 98945999999999872599879985656487999799999999983599479985368146751097999939869997
Q 000497 1358 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1437 (1460)
Q Consensus 1358 ~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~IaHrl~ti~~~DrIlVl~~G~ivE~ 1437 (1460)
+||||||||++||||++++|+|++||||||++|+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.
T Consensus 483 ~LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 562 (595)
T 2yl4_A 483 LLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEY 562 (595)
T ss_dssp CCCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEE
T ss_conf 68999999999999997599999998866689989999999999999659979999468789975998999989989997
Q ss_pred CCHHHHHCCCCCHHHHHHHHH
Q ss_conf 693578502994899999850
Q 000497 1438 GNPQTLLQDECSVFSSFVRAS 1458 (1460)
Q Consensus 1438 g~p~eLl~~~~s~f~~l~~~~ 1458 (1460)
|+|++|++++++.|+++++.+
T Consensus 563 g~~~~l~~~~~~~~~~~~~~q 583 (595)
T 2yl4_A 563 GKHEELLSKPNGIYRKLMNKQ 583 (595)
T ss_dssp ECSCC------C---------
T ss_pred CCHHHHHHCCCHHHHHHHHHH
T ss_conf 889999747872999999974
Done!